EMLSAT00000001537, EMLSAT00000001537-697384 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001537
Unique NameEMLSAT00000001537-697384
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: no visible phenotype
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
T F167 UN51_1537 female
  1. PreAdult2
  2. Adult
 Some abnormal
no visible phenotype 		30.10.2014 - 13:27
09.12.2014 - 00:00
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1267supercontigLSalAtl2s1267:90758..91334 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001537 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001537EMLSAG00000001537-684303Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000006724EMLSAE00000006724-715652Lepeophtheirus salmonisexon
EMLSAE00000006725EMLSAE00000006725-715653Lepeophtheirus salmonisexon
EMLSAE00000006726EMLSAE00000006726-715654Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771882auto771882Lepeophtheirus salmonispolypeptide
EMLSAP00000001537EMLSAP00000001537Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001537

>EMLSAP00000001537 ID=EMLSAP00000001537|Name=EMLSAP00000001537|organism=Lepeophtheirus salmonis|type=polypeptide|length=148bp
MKSFLILITLVSLTFGLEIRDCGSQGAEITKIDFPTCIKEPCVVHRGDQL
KAKLYLKAKKATDYLDCELSAIMSGIELPYPGGCDEADACQSLLEGECPV
EEGAELIYDVSIYIDKIFPTIVVDGKWKLLDEDEEXFSCFNIKMDIRD
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mRNA from alignment at LSalAtl2s1267:90758..91334-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001537-697384 ID=EMLSAT00000001537-697384|Name=EMLSAT00000001537|organism=Lepeophtheirus salmonis|type=mRNA|length=577bp|location=Sequence derived from alignment at LSalAtl2s1267:90758..91334- (Lepeophtheirus salmonis)
ATGAAGTCTTTTCTCATTCTAATTACTTTAGTTTCGCTTACCTTCGGACT
GGAAATTCGTGACTGCGGTAAGAAATTAAAATGGCATACTTATTCAGAAA
TTACATTACTACTGAAAATGAATAAACAGGTTCCCAAGGAGCAGAAATCA
CAAAAATCGACTTCCCAACATGTATTAAAGAGCCCTGTGTTGTTCATAGG
GGTGATCAGCTCAAAGCCAAACTTTATTTGAAAGCCAAAAAAGCAACAGA
CTATTTGGACTGCGAACTTTCAGCTATTATGAGTGGTATTGAGTTGCCTT
ACCCAGGAGGTTGTGATGAAGCAGATGCCTGCCAATCTCTTCTTGAAGGA
GAGTGCCCTGTAGAAGAAGGAGCAGAGCTTATCTATGACGTCAGCATTTA
TATTGACAAAATCTTCCCTACAGTAAATGAGACACAATGCCTAAAATTTT
AAAATCCTTTTGAATTTAATATCTTATTTTTTTTACATAGATTGTTGTGG
ATGGAAAATGGAAACTTTTGGATGAGGATGAAGAGGNTTTCTCTTGTTTC
AATATCAAAATGGATATAAGAGACTAA
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