EMLSAT00000001594, EMLSAT00000001594-697441 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001594
Unique NameEMLSAT00000001594-697441
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: no visible phenotype
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
NAG F152 LsFer3 unknown
  1. Nauplius I
  2. Copepodid
 no phenotype
no visible phenotype 		19.06.2014 - 00:00
27.06.2014 - 00:00
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s127supercontigLSalAtl2s127:117220..117762 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001594 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001594EMLSAG00000001594-684360Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000006975EMLSAE00000006975-715903Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772576auto772576Lepeophtheirus salmonispolypeptide
EMLSAP00000001594EMLSAP00000001594Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001594

>EMLSAP00000001594 ID=EMLSAP00000001594|Name=EMLSAP00000001594|organism=Lepeophtheirus salmonis|type=polypeptide|length=180bp
MAQQIRQNYDPECEDLINKQINMELYAFYSYLSMGAYFSRDDVALDGFAK
FFYISASEETRHAQKLIDYQHLRGGKVVFESVQTPSVQSWDSPVDAMEAA
LNLEKNVNASLLHIHSVAAEKDDAQLCDFLESEYLKEQVEGIKSIGTLLT
RMKRVGPGVGIHLIDEELKRSSTGHSPSNY
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mRNA from alignment at LSalAtl2s127:117220..117762-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001594-697441 ID=EMLSAT00000001594-697441|Name=EMLSAT00000001594|organism=Lepeophtheirus salmonis|type=mRNA|length=543bp|location=Sequence derived from alignment at LSalAtl2s127:117220..117762- (Lepeophtheirus salmonis)
ATGGCTCAACAAATCCGACAAAATTACGATCCAGAGTGTGAAGATCTCAT
AAATAAACAAATCAATATGGAGTTATATGCATTTTATTCATATTTATCGA
TGGGAGCATATTTTTCACGAGATGATGTAGCCCTTGATGGATTTGCTAAA
TTTTTCTACATTTCCGCATCTGAAGAAACAAGGCATGCTCAAAAATTGAT
AGACTACCAACATTTGAGGGGAGGAAAAGTGGTTTTTGAGTCTGTTCAAA
CCCCTTCAGTGCAGTCATGGGACTCTCCAGTTGATGCAATGGAAGCAGCA
CTCAATTTGGAAAAAAACGTAAATGCATCTCTTTTACATATCCATAGTGT
TGCGGCGGAGAAGGACGATGCTCAGCTCTGTGACTTTTTAGAGTCCGAGT
ACTTGAAGGAGCAAGTGGAAGGGATCAAGAGTATTGGAACACTATTAACT
CGAATGAAACGTGTTGGACCAGGCGTGGGTATACATTTGATTGATGAAGA
ACTCAAGAGAAGTTCAACCGGTCATTCCCCAAGTAATTATTGA
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