EMLSAT00000004451, EMLSAT00000004451-700298 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004451
Unique NameEMLSAT00000004451-700298
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s231supercontigLSalAtl2s231:945915..949068 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004451 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004451EMLSAG00000004451-687217Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000019388EMLSAE00000019388-728316Lepeophtheirus salmonisexon
EMLSAE00000019389EMLSAE00000019389-728317Lepeophtheirus salmonisexon
EMLSAE00000019390EMLSAE00000019390-728318Lepeophtheirus salmonisexon
EMLSAE00000019391EMLSAE00000019391-728319Lepeophtheirus salmonisexon
EMLSAE00000019392EMLSAE00000019392-728320Lepeophtheirus salmonisexon
EMLSAE00000019393EMLSAE00000019393-728321Lepeophtheirus salmonisexon
EMLSAE00000019394EMLSAE00000019394-728322Lepeophtheirus salmonisexon
EMLSAE00000019395EMLSAE00000019395-728323Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780128auto780128Lepeophtheirus salmonispolypeptide
EMLSAP00000004451EMLSAP00000004451Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004451

>EMLSAP00000004451 ID=EMLSAP00000004451|Name=EMLSAP00000004451|organism=Lepeophtheirus salmonis|type=polypeptide|length=522bp
MALLSFKKENSSSSLEAMDLSSNIQVKKRKTFLEEKRHESFANSALHRLA
EAAERKQIEDELMELEGSKGFSGDPSSHHYLLSNSHHPDSSSEPYILCSS
SSLNRKNSDASQCSSRTNSPKIEEDPQLTIESHSSYSTHLNTSGISRQQL
INSPCPVCGDKISGFHYGIFSCESCKGFFKRTVQNKKNYVCLRGSQCPVT
ISTRKKCPACRFDKCLNIGMKLEAIREDRTRGGRSTYQCSYNLPTTGVCS
TNSTTIPTIKRESRGDDHNTETKVNQSSGIPVLLHEIMSVEHLWFWSTSM
PSLSLNNSSSNTDTSQESPSNPVQTLTLLADKRLYKLVRWCKSLPLFKNI
LVDDQITLLINAWCELLVFSCCYKSVDSPGFIRLSQDKSLNLESAKSLGV
NECIEKMLNFSDQLRRLKVDHYEYVSLKVILLLTSAPLYVDATGLKEVDQ
VRESQEQVVQALQSYTNFHYPSMPNKFGELLLRMPELQRVCQVSKDMLQP
SQGSGETSPGFNLLMELLRGDH
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mRNA from alignment at LSalAtl2s231:945915..949068+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004451-700298 ID=EMLSAT00000004451-700298|Name=EMLSAT00000004451|organism=Lepeophtheirus salmonis|type=mRNA|length=3154bp|location=Sequence derived from alignment at LSalAtl2s231:945915..949068+ (Lepeophtheirus salmonis)
AATGGGCATTCCTTTTTGAAAGAGGAGGCCAAAGGAGTATTAGTTATGAG TATGACTGCATTGCCTCTACCAGTAGCAACAATTGTACGCAATCAGTTAT ATAAGTCATACAGGTTAATAACTAAGTAACCAAGTGTATAGTGTGAACTT ATTTAGAGAACCATGTATGTACAAGTGTGGTTTTTATTTCAAAAAACGTT TGTGTATTTGCTAAAAGAAACACCCATAAAATTATGTACACTAGGTATAT TATAAATACTCAAAGTAGTCATCTCTCTAATTACAGAAAGGACTTTGCAT ATTTGTTCATTACTAGTAAGTACTAATATATTGTATGCCTCTTTCCCCCG AGACGACACTATTTTTTTGTTATGGGCTTTCATTGTCTCTTTCCCCCTCA TGTTTTCACTTACTAATTTTATATAATACATTTTGCAGACAGAATCTAAT TTATGACTTCTTCCTTCTTATGTCTTATATATATATATATATTTGTATAA AAAAATCCCTGAACTTTATAGACAACAAAAGAAAGAAGCTTGTCTAGGAG AAGAGAAGGAAGAACCCCTCTCTCTCTCTCTCCTTACTTTAAAAAGAGGG AGGCTTTCTTGGTTTATTCAACCCTGGCTTTCTAAAAATACAAGGAGGGT GTTCTATACTCTCCCTTTAAAACTATATATATATTATCTTACCCCAGACT AAAAAGGGTGTTTTTCCCCCTCTTTCTTTAGCCATGAAAATAATAATTGA ATCCAAGGCATTATTATTATCCTCGAGACGACGACAACAAACATCATTTC CTTCCTTATCATCGTATACACCATGGCTCTTCTCTCTTTCAAGAAGGAAA ACAGTTCCTCATCCTTAGAAGCAATGGATCTAAGTAGCAACATACAAGTC AAGAAACGGAAAACCTTTCTTGAGGAAAAAAGGCATGAGTCCTTTGCTAA TTCTGCTCTACATCGACTTGCTGAAGCTGCAGAAAGAAAACAAGTGAGTC GTTATAGGTGGTATTCTTACATTATTTATTCTTATTTACGCGCGGGATTG CAGATTTTTTATTACATTGCTATTGCTCAGTATATTTTATTTTGTTGCAA ATATACGGAAATGACGTTATCCTTGAAAATGTTAAAAATAATAATTAAAG AGTTTATTCAACTATGTTTCTAATTACTCTTGGATTTCTCTCTTCTGCCA CAATTAAATGTACTTTCTTCTCATACTTATTCTTGAATTATTATGTTTTG TTATTAGATTGAAGATGAATTGATGGAGCTTGAAGGCTCCAAAGGCTTCT CAGGAGATCCTTCTTCACATCATTATCTCTTAAGTAACAGTCATCATCCC GATTCCTCTTCTGAGCCTTATATTCTTTGTTCATCATCATCATTAAATCG TAAAAACAGTGATGCGAGTCAATGCTCTTCACGAACTAATTCTCCAAAGA TTGAAGAGGATCCTCAATTAACTATTGAGTCTCATTCCTCGTATTCAACT CATTTAAATACTTCCGGTATTTCTCGTCAGCAGCTTATCAATAGGTAAGT AAATGTAAATTGGCATACCAAATAATCTTTTTTTCTTCTTCTARCCTACC ACTCTAGTCCGTGTCCAGTGTGTGGGGATAAAATCTCGGGTTTTCATTAC GGCATCTTTTCCTGTGAAAGCTGCAAGGGTTTTTTCAAAAGAACAGTTCA GAATAAAAAGAACTACGTTTGTTTGCGAGGCTCTCAGTGTCCAGTCACAA TATCAACGAGAAAAAAATGTCCTGCATGTAGATTCGATAAATGTCTCAAC ATTGGTATGAAATTAGAGGGTAAGTTTCCGTTCCGTTCCGTCTTCCTCAT ATTTGACTCAAAAATATTCATTAAATACTTATTTTTCTTTATTGTAATTA CAGCCATTCGAGAGGATCGTACTCGAGGAGGTCGCTCCACTTATCAATGC TCATATAACCTTCCAACCACTGGAGTTTGCTCGACAAACTCAACAACGAT TCCTACTATTAAGCGAGAATCTCGCGGTGATGATCATAACACGGAAACAA AAGTGAATCAAAGTAGCGGTATCCCAGTTTTGTTACATGAAATTATGAGT GTGGAGCATTTGTGGTTTTGGAGCACAAGTATGCCTTCTCTTTCTCTGAA TAATAGTAGTAGTAACACTGACACGTCTCAAGAATCTCCTTCTAACCCAG TACAAACTCTGACTTTGTTGGCAGATAAAAGACTGTATAAACTAGTACGA TGGTGTAAAAGCCTTCCCCTTTTTAAAAATATTCTGGTGAGTCCAAGGGA AAAACATTTTTTAATTAAATTACACATCTTGTATATATATAAATATAGGT CGATGATCAAATAACTCTCCTAATCAATGCCTGGTGTGAGCTTTTAGTTT TTTCCTGCTGTTATAAATCCGTAGATTCCCCAGGATTCATCCGCTTATCT CAAGATAAATCCCTCAATCTCGAATCTGCCAAGAGCCTCGGCGTTAATGA GTGTATTGAAAAAATGCTCAACTTTTCCGATCAGCTTCGACGTCTCAAAG TGGATCACTATGAATATGTTAGTCTCAAAGTCATCCTGCTACTCACATCC GGTATGCTCTATTTTTAATATTCATTATATTTTTATTAATTAAGCACCTT TGTACGTAGATGCGACTGGACTTAAAGAGGTGGACCAAGTAAGAGAGTCC CAGGAGCAGGTAGTGCAGGCCTTACAAAGCTATACGAACTTTCATTATCC TTCCATGCCTAACAAATTTGGTGAGCTACTCTTGAGGATGCCAGAGTTAC AACGTGTTTGTCAGGTATATACTACTTAATTAAATGTATGGATTGTTCAA ATTATGTATCCCCAGGTGAGTAAGGATATGTTGCAGCCAAGTCAAGGGAG CGGTGAGACATCTCCTGGATTCAATTTACTAATGGAGCTTCTGCGTGGAG ATCACTGAGATCATGGTGGTTATACTGATTAAATCTCCTACCATGAAAAC AATTATACAACCAAAAAGAAATAAAAATTATTATTCGACTACAAAAAGAT TTCCTAAATATAATTTGCACTTCAAAAACAGATTTATATTATCATTTATA TAGTTTTTCCTATGCCATATATCAAAAATGCATAACACATAAATATTATA TATA
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