EMLSAP00000000861, EMLSAP00000000861 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000000861
Unique NameEMLSAP00000000861
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length1778
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1609..1648
NoneNo IPR availableGENE3D3.40.50.300coord: 64..78
e-value: 5.8E-15
score: 54.4
coord: 149..291
e-value: 5.8E-15
score: 54.4
NoneNo IPR availablePANTHERPTHR23175FAMILY NOT NAMEDcoord: 50..1733
NoneNo IPR availablePANTHERPTHR23175:SF4SUBFAMILY NOT NAMEDcoord: 50..1733
IPR001806Small GTPase superfamilyPRINTSPR00449RASTRNSFRMNGcoord: 227..240
score: 37.19
coord: 264..286
score: 36.53
coord: 58..79
score: 32.0
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 192..286
e-value: 2.4E-7
score: 30.1
IPR002713FF domainSMARTSM00441FFcoord: 408..464
e-value: 66.0
score: 0.9
coord: 309..366
e-value: 3.7E-6
score: 36.5
IPR002713FF domainGENE3D1.10.10.440coord: 301..368
e-value: 5.4E-4
score: 19.5
IPR002713FF domainPROSITEPS51676FFcoord: 299..366
score: 6.716
IPR002713FF domainPROSITEPS51676FFcoord: 527..594
score: 8.478
IPR002713FF domainSUPERFAMILY81698FF domaincoord: 305..370
IPR020849Small GTPase superfamily, Ras typeSMARTSM00173RAScoord: 156..289
e-value: 1.3E-4
score: -41.2
IPR000198Rho GTPase-activating protein domainPFAMPF00620RhoGAPcoord: 1675..1733
e-value: 3.8E-13
score: 49.2
IPR000198Rho GTPase-activating protein domainGENE3D1.10.555.10coord: 1645..1733
e-value: 3.4E-18
score: 65.1
IPR000198Rho GTPase-activating protein domainPROSITEPS50238RHOGAPcoord: 1661..1778
score: 13.794
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 64..79
coord: 165..289
IPR008936Rho GTPase activation proteinSUPERFAMILY48350GTPase activation domain, GAPcoord: 1670..1729

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000000861 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000000861EMLSAT00000000861-696708Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000000861 ID=EMLSAP00000000861|Name=EMLSAP00000000861|organism=Lepeophtheirus salmonis|type=polypeptide|length=1778bp
MDHHHPKSKLESAWSATLGAGSRGMMRAAGGLTLRRGDSAASSGPSKLTS
ISVIGLSGSEKEKGSVGTGKSCLINRFIQPTADNYGVDHISCFSQSDFCG
RVVNNDHFLFWGDVLKLNDEGTEFHIQVVEQTEFIDDASFQTFRGSGKFE
SYVKRCTNTKLVSAEKIAYICKDQLGIEREYEQKFMPDGRFTVDGFLCVF
DVSDVPNRSVDKQVDVCASILTTVLRMKKPIILVATKCDEAHEIYVREIE
KLVNRKEFKGLVPVVECSAHENINVDQAFFALAQMIDRTRGRSRIISYYE
AAAMKRETLDHATDAFQRLLKLQITDYGSMWSTTSKKLSNHHEYMHYVDI
FGKDTAQRLFKRHIRKLKDDYLGAKVQRYLDLLPEVLHELFPDFDTMGEG
DWGLVKERIREHPDFDHWFIEYPEDTTWMEADLFDGGESTENRIPYDILE
MPEAENVYKNHLNQLHANQKRLEFRKDFKILLEEMGCVTPGKSINELRVL
FLGRECFENLSERDVQDIYDLHQREIIVKAKKNFQELLLERSDLFYQFRS
SPTGTITQDDIFDITELLQEDSRYKALDRMDADRKLLLYQHLGFVHCPIR
EHCPAFPNCFDSCVERIVSKKATRPNSFTRGGNRGSGPNNILENSHLNLL
VLGIEGLANDLANHIRNQCNDNDFEYQGHIFSLEFRTVTGDVSLPENAFR
TQDFLPHGCFCTFSNADSFEYIRVSLEKTLLSNLEHEDRLPFQGLPLVLV
FAPDSSLTEKDLAYLRKEGQSIADSFQCSFINVCVRSDLDNSFTISDNLI
EDAIRDLIDGISRRSGILNAYQSATSNNTEPDIRIIMCMLCGDPYNIEHV
LAPVLTHQNSSCINGERGVTIEMPLGDKIRRRIEIIISSYHGATEFRDEL
IHGFILVYSTNRKASLATLSAFSMDVPELPILVYGINDITIVSGGLSTLT
GIQNNTSSSANEQLRPLLISEGKNLSERLNAHFINSNTSQQKVTFYTEFF
QEVFDKKSEIESAFSMEDNNRLDDSGEGTLERPSRRIQPVPPPRMDSYRL
KRGPPSNASRSGSGSEIYERLPGLDSGSLVDDEPSFDDRLRLSPSDEDSD
IYSHVDSMDRQNGGPTEHLIKPSLIKNRRKQQDVSSDSSFISFPARPSFF
KSNRSSPTRDSSLPKYGVSRRHLPPAGGGITTAPPPPPPPPPPPLPSQRL
FKADSLNTDRTGYFENRGFEGFPSPDTPPEPAPPDPRDPRNNSSNRGGTG
WVDDSLFLRRKNDGLEDSEMWNSNGSSTNNIGGGAFTTGRRRPPPPVKPR
GQLPGRLNMNDFNKITAALTSMQLENKLSPRSSINAPLAISEDIDQGGYA
VPRDNLKGGGGSIESNENVKSKSSSSVSSSQQPNEYAQPISLDSSDLSSS
GTKNKLRHRERREQIAMQADGSGSDSESSSDDEASSRHGNNNRPPHKRQH
RKKKGVAIPVATPKVPPMPTQMPRVMAKDPTKSPTIEPDRALPNSDYSED
SDNCPSVPLLQQKQPPSSSSSYYPPPPXRLRYTQLKSSSSSGGGGSLGGT
PAPHHIPPPSSRVTSHNISSFSPLTFTTKLLVDPLASPRGDEFPSSSKFD
EKQRKKWDKENRQRLKDDERRKLKDEKRRLKEEKEKRDSEAKQRKKEGKS
KLKANSVQAQPTLDDFKAAPDKPVPVFLNKCITYIEKEGLDAEGLYRVPG
NRAHVELLFQKFDEDQNVDINTLDIAVNAVATAQSKIVYEFEDLGKFEAV
RPHMEEVVQTLIDQFRFLFCGQEEVMMV
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