mrna export factor, maker-scaffold125_size330479-snap-gene-0.15 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of mrna export factor vs. L. salmonis genes
Match: EMLSAG00000009137 (supercontig:LSalAtl2s:LSalAtl2s575:53505:62115:1 gene:EMLSAG00000009137 transcript:EMLSAT00000009137 description:"maker-LSalAtl2s575-augustus-gene-0.8") HSP 1 Score: 586.26 bits (1510), Expect = 0.000e+0 Identity = 274/343 (79.88%), Postives = 300/343 (87.46%), Query Frame = 0 Query: 34 TSTNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQP-KEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNPKDNFTFKCHRSNGVNNGFQDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRAK 375 ++ NP KD+EV + PDDSVS L FSPPSL FLIAGSWDNNVRCWEI G GQS GPILDVCWHDDG+KVFMASCDKQVKCWDL SNQT++VA+H APVK VRW KAPNY ALMTGSWDKTLKFWDTRSPNPIMSI+L ER YCAD+++PMAVVG +GRGI+IY L+GQ KE KR+EPPLKYQHRC+S+FKDKK QPTGFALGSVEGRVAIQYAN+TNPK+NFTFKCHRSNG NGFQDIYAVNDIAFHP HGTLATVGSDGR+SFWDKDARTKLKTSE MDQPIT C F++NG IFAYS SYDWS+GHEF+ PQKKN+IYLRSCFDELKPR K Sbjct: 315 STPNPMKDVEVVNPPDDSVSSLCFSPPSLQQNFLIAGSWDNNVRCWEISGTGQS---------GPILDVCWHDDGSKVFMASCDKQVKCWDLGSNQTIQVAQHDAPVKCVRWFKAPNYAALMTGSWDKTLKFWDTRSPNPIMSINLNERVYCADVDFPMAVVGLSGRGIVIYSLDGQTIKEXKRVEPPLKYQHRCVSIFKDKKVQPTGFALGSVEGRVAIQYANSTNPKENFTFKCHRSNGATNGFQDIYAVNDIAFHPIHGTLATVGSDGRYSFWDKDARTKLKTSEPMDQPITKCCFTANGQIFAYSVSYDWSKGHEFYYPQKKNFIYLRSCFDELKPRTK 648
BLAST of mrna export factor vs. L. salmonis genes
Match: EMLSAG00000000823 (supercontig:LSalAtl2s:LSalAtl2s1136:99948:102171:1 gene:EMLSAG00000000823 transcript:EMLSAT00000000823 description:"maker-LSalAtl2s1136-augustus-gene-1.53") HSP 1 Score: 187.963 bits (476), Expect = 8.311e-57 Identity = 112/337 (33.23%), Postives = 177/337 (52.52%), Query Frame = 0 Query: 41 DIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIM-SIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATN--PKDNFTFKCHRSNGVNNGFQDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFD-ELKPR 373 + ++ +APDD ++ F P S FL+ SWD +VR +++ + + + S P+LD C D +V+ D +K +D+ S + H VK VR+ + N L++GSWD T+KFWD R+ NP++ + ER Y L V+ T GR + ++ + ++ E LKYQ R + F +K +G+ L S+EGRVA++Y + + K + FKCHRS NG + IY VN IAFH ++ T AT GSDG + WD + +L I + +FS++G + A ++SY + G P + + IY+R D E KP+ Sbjct: 19 EYKIKNAPDDGITKAEFGPNSA--QFLLVSSWDKSVRLYDVIND---TLRVKYSHSAPVLD-CTFQDPIRVWSGGLDGSLKTFDINSGTETLIGSHEKAVKCVRYSEEIN--GLISGSWDSTIKFWDPRNSNPLIGTYPQPERVYALSLAGEKLVIATLGRKVWVWDIRNMSYVQQKRESSLKYQTRALGCFPNK----SGYVLSSIEGRVAVEYLDPSTDIQKKKYAFKCHRSK--ENGIEVIYPVNTIAFHKEYNTFATGGSDGLVNIWDGHNKKRLCQFHKYPTSIASLTFSNDGRVLAIASSYMYEEGKPLDTPIEDS-IYIRHVSDQETKPK 340
BLAST of mrna export factor vs. L. salmonis genes
Match: EMLSAG00000001111 (supercontig:LSalAtl2s:LSalAtl2s1186:117586:119588:-1 gene:EMLSAG00000001111 transcript:EMLSAT00000001111 description:"maker-LSalAtl2s1186-snap-gene-1.40") HSP 1 Score: 53.1434 bits (126), Expect = 5.269e-8 Identity = 36/118 (30.51%), Postives = 64/118 (54.24%), Query Frame = 0 Query: 52 VSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMK--VAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWD 167 V C +F+P S +++GS+D +VR W+++ G+ KT + P+ V ++ DG+ + +S D + WD AS Q +K + PV V++ +PN ++ + D TLK W+ Sbjct: 117 VFCCNFNPQS---NLVVSGSFDESVRIWDVR-TGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGXCRIWDTASGQCLKTLIDNDNPPVSFVKF--SPNGKYILAATLDNTLKLWE 227
BLAST of mrna export factor vs. L. salmonis genes
Match: EMLSAG00000012753 (supercontig:LSalAtl2s:LSalAtl2s968:242539:244062:-1 gene:EMLSAG00000012753 transcript:EMLSAT00000012753 description:"maker-LSalAtl2s968-augustus-gene-1.38") HSP 1 Score: 53.1434 bits (126), Expect = 6.287e-8 Identity = 43/166 (25.90%), Postives = 75/166 (45.18%), Query Frame = 0 Query: 41 DIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCY---CADLEYPMAVVGTAGRGII 203 DI+V++ D +SF P N + S D ++ +E + + K + I + +++DGT+++ AS DK K D+++ QT A S+ +K+ + TG D +K WD R +MS E C D + + VV ++G G + Sbjct: 114 DIKVSTETSD----ISFHPE---NNVIAVASMDGSISIFEYENEKNNLLKKLCLHKKNIRSMEFNEDGTEIYSASKDKSYKIIDVSTYQTKLTVPKAHGDSSLFKIKSISEHLYATGDEDGLVKLWDHRQKKDVMSEKKFEEFVTDICFDDDKKLMVV-SSGEGTL 271
BLAST of mrna export factor vs. L. salmonis genes
Match: EMLSAG00000009796 (supercontig:LSalAtl2s:LSalAtl2s638:23384:28063:-1 gene:EMLSAG00000009796 transcript:EMLSAT00000009796 description:"maker-LSalAtl2s638-augustus-gene-1.14") HSP 1 Score: 50.8322 bits (120), Expect = 3.113e-7 Identity = 30/114 (26.32%), Postives = 60/114 (52.63%), Query Frame = 0 Query: 66 FLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMK-VAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSID 178 +I+GS+D V+ W ++ S +T + +GP+L C H G + S DK +K W + + + ++ + H V + + ++TGS D+T+K WD+++ + ++D Sbjct: 290 LVISGSYDQTVKIWCLKTG--SCKRTLRGHEGPVL--CVHWAGFTLLSGSADKTIKQWSVETGECIRTLTGHGDAVTCI----SLETDRIVTGSLDRTIKLWDSKTGKCVSTLD 395
BLAST of mrna export factor vs. SwissProt
Match: gi|166218821|sp|Q7ZWF0.2|RAE1L_DANRE (RecName: Full=mRNA export factor; AltName: Full=Rae1 protein homolog; AltName: Full=mRNA-associated protein mrnp 41) HSP 1 Score: 556.214 bits (1432), Expect = 0.000e+0 Identity = 252/368 (68.48%), Postives = 304/368 (82.61%), Query Frame = 0 Query: 10 IAMFGTSSAFGGGNQPAGFGVGQPTSTNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNP-KDNFTFKCHRSNGVNNGF-QDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRAK 375 +++FGT++ FG G FG S NP KD+EV S PDDS+SCL+FSPP++P FLI GSW N+VRCWE+Q NGQ+ PK QQ GP+LDVCW DDG+KVF ASCDK K WDL SNQ +++A+H P++++ W+KAPNY+ +MTGSWDKTLKFWDTRSPNP+MS+ + ERCYCAD+ YPMAVV TA RG+I+YQLE QP EF+RIE PLK+QHRC+++FKDK+ +PTGFALGS+EGRVAI Y N NP KDNFTFKCHRSNG N QDIYAVN I+FHP HGTLATVGSDGRFSFWDKDARTKLKTSE +DQPITAC F+ NG+IFAY++SYDWS+GHE++NPQKKNYI+LR+ +ELKPR K Sbjct: 1 MSLFGTNTGFGSGGT-GVFGSTTTDSHNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIGGSWANDVRCWEVQDNGQTVPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQAIQIAQHEGPIRTIHWIKAPNYSCIMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQSKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTATPQDIYAVNAISFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPITACCFNHNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAEELKPRNK 367
BLAST of mrna export factor vs. SwissProt
Match: gi|3122666|sp|P78406.1|RAE1L_HUMAN (RecName: Full=mRNA export factor; AltName: Full=Rae1 protein homolog; AltName: Full=mRNA-associated protein mrnp 41 >gi|75070984|sp|Q5RF99.1|RAEL1_PONAB RecName: Full=mRNA export factor; AltName: Full=Rae1 protein homolog; AltName: Full=mRNA-associated protein mrnp 41) HSP 1 Score: 555.829 bits (1431), Expect = 0.000e+0 Identity = 256/368 (69.57%), Postives = 305/368 (82.88%), Query Frame = 0 Query: 10 IAMFGTSSAFGGGNQPAGFGVGQPTSTNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNP-KDNFTFKCHRSNGVNNGF-QDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRAK 375 +++FGT+S FG + FG + NP KDIEV S+PDDS+ CLSFSPP+LP FLIAGSW N+VRCWE+Q +GQ+ PK QQ GP+LDVCW DDG+KVF ASCDK K WDL+SNQ +++A+H APVK++ W+KAPNY+ +MTGSWDKTLKFWDTRS NP+M + L ERCYCAD+ YPMAVV TA RG+I+YQLE QP EF+RIE PLK+QHRC+++FKDK+ +PTGFALGS+EGRVAI Y N NP KDNFTFKCHRSNG N QDIYAVN IAFHP HGTLATVGSDGRFSFWDKDARTKLKTSE +DQPI+AC F+ NG+IFAY++SYDWS+GHEF+NPQKKNYI+LR+ +ELKPR K Sbjct: 1 MSLFGTTSGFGTSGT-SMFGSATTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNK 367
BLAST of mrna export factor vs. SwissProt
Match: gi|75076335|sp|Q4R6D2.1|RAE1L_MACFA (RecName: Full=mRNA export factor; AltName: Full=Rae1 protein homolog; AltName: Full=mRNA-associated protein mrnp 41) HSP 1 Score: 554.288 bits (1427), Expect = 0.000e+0 Identity = 256/368 (69.57%), Postives = 305/368 (82.88%), Query Frame = 0 Query: 10 IAMFGTSSAFGGGNQPAGFGVGQPTSTNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNP-KDNFTFKCHRSNGVNNGF-QDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRAK 375 +++FGT+S FG + FG + NP KDIEV S+PDDS+ CLSFSPP+LP FLIAGSW N+VRCWE+Q +GQ+ PK QQ GP+LDVCW DDG+KVF ASCDK K WDL+SNQ +++A+H APVK++ W+KAPNY+ +MTGSWDKTLKFWDTRS NP+M + L ER YCAD+ YPMAVV TAGRG+I+YQLE QP EF+RIE PLK+QHRC+++FKDK+ +PTGFALGS+EGRVAI Y N NP KDNFTFKCHRSNG N QDIYAVN IAFHP HGTLATVGSDGRFSFWDKDARTKLKTSE +DQPI+AC F+ NG+IFAY++SYDWS+GHEF+NPQKKNYI+LR+ +ELKPR K Sbjct: 1 MSLFGTTSGFGTSGT-SMFGSATTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERYYCADVIYPMAVVATAGRGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNK 367
BLAST of mrna export factor vs. SwissProt
Match: gi|166218412|sp|A5GFN6.1|RAEL1_PIG (RecName: Full=mRNA export factor; AltName: Full=Rae1 protein homolog; AltName: Full=mRNA-associated protein mrnp 41) HSP 1 Score: 553.518 bits (1425), Expect = 0.000e+0 Identity = 256/368 (69.57%), Postives = 304/368 (82.61%), Query Frame = 0 Query: 10 IAMFGTSSAFGGGNQPAGFGVGQPTSTNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNP-KDNFTFKCHRSNGVNNGF-QDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRAK 375 +++FGT+S FG + FG + NP KDIEV S+PDDS+ CLSFSPP+LP FLIAGSW N+VRCWE+Q +GQ+ PK QQ GP+LDVCW DDG+KVF ASCDK K WDL SNQ +++A+H APVK++ W+KAPNY+ +MTGSWDKTLKFWDTRS NP+M + L ERCYCAD+ YPMAVV TA RG+I+YQLE QP EF+RIE PLK+QHRC+++FKDK+ +PTGFALGS+EGRVAI Y N NP KDNFTFKCHRSNG N QDIYAVN IAFHP HGTLATVGSDGRFSFWDKDARTKLKTSE +DQPI+AC F+ NG+IFAY++SYDWS+GHEF+NPQKKNYI+LR+ +ELKPR K Sbjct: 1 MSLFGTTSGFGTSGT-SMFGSTTTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNK 367
BLAST of mrna export factor vs. SwissProt
Match: gi|82231254|sp|Q5FVA9.1|RAE1L_XENTR (RecName: Full=mRNA export factor; AltName: Full=Rae1 protein homolog; AltName: Full=mRNA-associated protein mrnp 41) HSP 1 Score: 550.436 bits (1417), Expect = 0.000e+0 Identity = 251/341 (73.61%), Postives = 294/341 (86.22%), Query Frame = 0 Query: 37 NPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNP-KDNFTFKCHRSNGVN-NGFQDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRAK 375 NP KDIEV S PDDS+SCLSFSPP+LP FLIAGSW N+VRCWE+Q NGQ+ PK QQ GP+LDVCW DDG+KVF ASCDK K WDL SNQ++++A+H AP+K+V WVKAPNY+ +MTGSWDK+LKFWDTRSPNP++++ L ERCYCAD+ YPMAVV TA RG+I+YQLE QP EF+RI+ PLK+QHRC+++FKDK+ +PTGFALGS+EGRVAI Y N NP KDNFTFKCHRSNG N QDIYAVN IAFHP HGTLATVGSDGRFSFWDKDARTKLKTSE +DQPI+ACSF+ NG+IFAYS+SYDWS+GHEF+NPQKKNYI+LR+ +ELKPR K Sbjct: 27 NPMKDIEVTSPPDDSISCLSFSPPTLPGNFLIAGSWANDVRCWEVQDNGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQSIQIAQHDAPIKTVHWVKAPNYSCIMTGSWDKSLKFWDTRSPNPLLTLQLPERCYCADVVYPMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTTAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACSFNHNGNIFAYSSSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNK 367
BLAST of mrna export factor vs. SwissProt
Match: gi|75070022|sp|Q5E9A4.1|RAE1L_BOVIN (RecName: Full=mRNA export factor; AltName: Full=Rae1 protein homolog; AltName: Full=mRNA-associated protein mrnp 41) HSP 1 Score: 545.043 bits (1403), Expect = 0.000e+0 Identity = 251/350 (71.71%), Postives = 293/350 (83.71%), Query Frame = 0 Query: 28 FGVGQPTSTNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNP-KDNFTFKCHRSNGVNNGF-QDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRAK 375 FG + NP KDIEV S+PDDS+ CLSFSPP+LP FLIAGSW N+VRCWE+Q +GQ+ PK QQ GP+LDVCW DDG+KVF ASCDK K WDL SNQ +++A+H APVK+V W+KAPNY+ +MTGSWDKTLKFWDTRS NP+M + L ERCYCAD+ YPMAVV TA RG+I+YQLE QP EF+RIE PLK+QHRC+++FKDK+ +PTGFALGS+EGRVAI Y N NP KDNFTFKCHRSNG N QDIYAVN IAFHP HGTLATVGSDGRFSFWDKDARTKLKTSE +DQPI+AC F+ NG+IFAY++SYDWS+GHEF+NPQKKNYI+LR+ +ELKPR K Sbjct: 18 FGSTTTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQAIQIAQHDAPVKTVHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNK 367
BLAST of mrna export factor vs. SwissProt
Match: gi|114154818|sp|Q3SWS8.1|RAE1L_RAT (RecName: Full=mRNA export factor; AltName: Full=Rae1 protein homolog; AltName: Full=mRNA-associated protein mrnp 41) HSP 1 Score: 544.273 bits (1401), Expect = 0.000e+0 Identity = 249/350 (71.14%), Postives = 292/350 (83.43%), Query Frame = 0 Query: 28 FGVGQPTSTNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNP-KDNFTFKCHRSNGVNNGF-QDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRAK 375 FG + NP KDIEV S+PDDS+ CLSFSPP+LP FLIAGSW N+VRCWE+Q +GQ+ PK QQ GP+LDVCW DDG+KVF ASCDK K WDL SNQ +++A+H APVK++ W+KAPNY+ +MTGSWDKTLKFWDTRS NP+M + L ERCYCAD+ YPMAVV TA RG+I+YQLE QP EF+RIE PLK+QHRC+++FKDK+ +PTGFALGS+EGRVAI Y N NP KDNFTFKCHRSNG N QDIYAVN IAFHP HGTLATVGSDGRFSFWDKDARTKLKTSE +DQP+ AC F+ NG+IFAY++SYDWS+GHEF+NPQKKNYI+LR+ +ELKPR K Sbjct: 18 FGSTTTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPVAACGFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNK 367
BLAST of mrna export factor vs. SwissProt
Match: gi|81914027|sp|Q8C570.1|RAE1L_MOUSE (RecName: Full=mRNA export factor; AltName: Full=Rae1 protein homolog; AltName: Full=mRNA-associated protein mrnp 41) HSP 1 Score: 543.888 bits (1400), Expect = 0.000e+0 Identity = 250/350 (71.43%), Postives = 292/350 (83.43%), Query Frame = 0 Query: 28 FGVGQPTSTNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNP-KDNFTFKCHRSNGVNNGF-QDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRAK 375 FG + NP KDIEV S+PDDS+ CLSFSPP+LP FLIAGSW N+VRCWE+Q +GQ+ PK QQ GP+LDVCW DDG+KVF ASCDK K WDL SNQ +++A+H APVK++ W+KAPNY+ +MTGSWDKTLKFWDTRS NP+M + L ERCYCAD+ YPMAVV TA RG+I+YQLE QP EF+RIE PLK+QHRC+++FKDK+ +PTGFALGS+EGRVAI Y N NP KDNFTFKCHRSNG N QDIYAVN IAFHP HGTLATVGSDGRFSFWDKDARTKLKTSE +DQPI AC F+ NG+IFAY++SYDWS+GHEF+NPQKKNYI+LR+ +ELKPR K Sbjct: 18 FGSTTTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPIAACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNK 367
BLAST of mrna export factor vs. SwissProt
Match: gi|3123163|sp|Q93454.1|RAE1_CAEEL (RecName: Full=mRNA export factor rae-1; AltName: Full=Nuclear pore complex protein 17; AltName: Full=Nucleoporin-17) HSP 1 Score: 384.03 bits (985), Expect = 2.196e-131 Identity = 190/365 (52.05%), Postives = 233/365 (63.84%), Query Frame = 0 Query: 13 FGTSSAFGGGNQPAGFGVGQPTSTNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRS-PNP--IMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQ-PTGFALGSVEGRVAIQYANATNPKDNFTFKCHRSNGVNNGFQDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPR 373 FG S FGG N +T N D V+ AP+D++ + FSP L GSWD +R W E K QQ++ PILD+ W +D +K+F+A DK+ + WDLASNQ V H PVK+ W+ NY LMTGS+DKTL+FWD ++ PN + I L ER Y AD+ YPMAVV A + I +Y LE P E K IE LK+Q RCIS+FKDK Q P GFALGS+EGRVA+QY + NPKDNFTFKCHRS + NGFQ+IYAVNDI FHPQHGTL T+GSDGR+S WDKDARTKLKTSE P+T C S+G Y+ YDWSRGHE N Q + I + C +++KPR Sbjct: 7 FGNKSMFGGSNISTSTTTPAANTTQ-NDDFLVDGAPEDTIQVIKFSPTPQDKPMLACGSWDGTIRVWMFNDANTFEGKAQQNIPAPILDIAWIEDSSKIFIACADKEARLWDLASNQVAVVGTHDGPVKTCHWINGNNYQCLMTGSFDKTLRFWDMKNLPNQTQMAQIQLPERVYAADVLYPMAVVALANKHIKVYNLENGPTEVKDIESQLKFQIRCISIFKDKSNQNPAGFALGSIEGRVAVQYVDVANPKDNFTFKCHRSAELVNGFQEIYAVNDICFHPQHGTLVTIGSDGRYSMWDKDARTKLKTSEPHPMPLTCCDVHSSGAFLVYALGYDWSRGHE-GNTQPGSKIVIHKCIEDMKPR 369
BLAST of mrna export factor vs. SwissProt
Match: gi|83305440|sp|Q38942.2|RAE1_ARATH (RecName: Full=Protein RAE1; AltName: Full=RNA export factor 1) HSP 1 Score: 325.094 bits (832), Expect = 1.452e-108 Identity = 165/355 (46.48%), Postives = 216/355 (60.85%), Query Frame = 0 Query: 26 AGFGVGQPTSTNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQS---EPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASN-QTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNPKDNFTFKCHRSNGVNNGFQDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRAKP 376 A FG ++NPNK EV +P DS+S LSFSP + L+A SWDN VRCWEI +G S PK S P+L W DDGT VF CDKQ K W L S Q + VA H P+ ++ W+ P L TGSWDKTLK+WDTR NP+ + L ++CY +++P+ VVGTA R +I++ L+ EFKRI+ PLKYQ RC++ F D++ GF +GS+EGRV + + + + NFTFKCHR DIY+VN + FHP HGT AT GSDG F+FWDKD++ +LK +QPI SF+ +G I+AY+A YDWS+G E HNP E + +AKP Sbjct: 2 ATFGAPATANSNPNKSYEVTPSPADSISSLSFSPRA---DILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWI--PGMNLLATGSWDKTLKYWDTRQQNPVHTQQLPDKCYTLSVKHPLMVVGTADRNLIVFNLQNPQTEFKRIQSPLKYQTRCVTAFPDQQ----GFLVGSIEGRVGVHHLDDSQQSKNFTFKCHRDG------NDIYSVNSLNFHPVHGTFATAGSDGAFNFWDKDSKQRLKAMSRCNQPIPCSSFNHDGSIYAYAACYDWSKGAENHNPATAKSSIFLHLPQESEVKAKP 341
BLAST of mrna export factor vs. nr
Match: gi|1227970560|ref|XP_021916680.1| (mRNA export factor [Zootermopsis nevadensis] >gi|646718817|gb|KDR21151.1| mRNA export factor [Zootermopsis nevadensis]) HSP 1 Score: 588.186 bits (1515), Expect = 0.000e+0 Identity = 269/364 (73.90%), Postives = 308/364 (84.62%), Query Frame = 0 Query: 11 AMFGTSSAFGGGNQPAGFGVGQPTSTNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNPKDNFTFKCHRSNGVNNGFQDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRA 374 + G SS+FG N P +S NP KD EV S PDDSVS L+FSP ++P FLIAGSWDNNVRCWE++ G++ PK+ Q+MQGP+LDVCW DDGTKVFMASCDK VKCWDL SNQTM+VA H APVK+ WVK P Y+ LMTGSWDKTLKFWDTRSPNP+++I L ER YCAD++YPMAVVGTAGRG+I+YQLEG+P+E+KRIE PLKYQHRCI++F+DKK PTG+ALGSVEGRVAIQY N NPKDNFTFKCHRSNG NG+QDIYAVNDIAFHP HGTLATVGSDG FSFWDKDARTKLK SEAM+QPIT C F+SNG IFAY+ SYDWS+GHEF+NP KKNYI+LRSC+DELKPR+ Sbjct: 5 STLGASSSFGATNTP--------SSANPMKDFEVTSPPDDSVSSLAFSPATIPQNFLIAGSWDNNVRCWEVEQTGKTIPKSMQTMQGPVLDVCWSDDGTKVFMASCDKMVKCWDLNSNQTMQVAAHDAPVKTCHWVKGPTYSCLMTGSWDKTLKFWDTRSPNPMLTISLPERAYCADVDYPMAVVGTAGRGLIVYQLEGKPQEYKRIESPLKYQHRCIAIFRDKKKSPTGYALGSVEGRVAIQYVNPQNPKDNFTFKCHRSNGAPNGYQDIYAVNDIAFHPVHGTLATVGSDGSFSFWDKDARTKLKPSEAMEQPITRCCFNSNGQIFAYAVSYDWSKGHEFYNPLKKNYIFLRSCYDELKPRS 360
BLAST of mrna export factor vs. nr
Match: gi|1325324795|ref|XP_023344237.1| (mRNA export factor-like [Eurytemora affinis]) HSP 1 Score: 583.563 bits (1503), Expect = 0.000e+0 Identity = 268/366 (73.22%), Postives = 311/366 (84.97%), Query Frame = 0 Query: 10 IAMFGTSSAFGGGNQPAGFGVGQPTSTNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNPKDNFTFKCHRSNGVNNGFQDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRAK 375 +A+FG SS GGG+ FG +++NPNKD E+ + DDS+S L+FSP + FL++G+WDNNVRCWEI G+S PK QQ+M GPILD CW DDG+KVFMASCDKQVKCWDL SNQ ++VAEH APV++VRWVKA NYTALMT SWDKTLKFWDTRSPNP++SIDL ER YCAD++YPMAVVGTAGRGIIIYQL+GQPKEFK++E PLKYQHRC+S++KDK PTGFALGSVEGRVAIQY A NPKDNFTFKCHRSNG NGFQDI+AVNDIAFHP HGTLATVGSDGRFSFWDKDARTKLKTSE +Q IT C+F+ +G IFAY+ SYDWS+GHE+HN QKKNYI+LRSCF+++KPR K Sbjct: 1 MALFGQSSFVGGGS--TSFGTTAASASNPNKDYEIQNPSDDSISSLAFSPTA---NFLVSGAWDNNVRCWEIDNTGKSIPKAQQTMAGPILDCCWSDDGSKVFMASCDKQVKCWDLGSNQAVQVAEHQAPVRAVRWVKASNYTALMTCSWDKTLKFWDTRSPNPMLSIDLPERAYCADVDYPMAVVGTAGRGIIIYQLDGQPKEFKKVESPLKYQHRCVSIYKDKNQTPTGFALGSVEGRVAIQYVQAVNPKDNFTFKCHRSNGAVNGFQDIFAVNDIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQCEQSITKCAFNKDGQIFAYAVSYDWSKGHEYHNTQKKNYIFLRSCFEDMKPRQK 361
BLAST of mrna export factor vs. nr
Match: gi|970904388|ref|XP_015118079.1| (PREDICTED: mRNA export factor [Diachasma alloeum] >gi|970904390|ref|XP_015118080.1| PREDICTED: mRNA export factor [Diachasma alloeum] >gi|970904392|ref|XP_015118081.1| PREDICTED: mRNA export factor [Diachasma alloeum]) HSP 1 Score: 579.711 bits (1493), Expect = 0.000e+0 Identity = 259/352 (73.58%), Postives = 305/352 (86.65%), Query Frame = 0 Query: 23 NQPAGFGVGQPTSTNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNPKDNFTFKCHRSNGVNNGFQDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRA 374 NQ + G P++ NP KD EV S PDDS+S L+FSP S+P FL+AGSWD NVRCWE++ +G++ PK+ Q++ GP+LDVCWHDDGTKVFMASCDK VKCWDLASNQ+++VA+H APVK+ WVK NY+ LMTGSWDKTLKFWDTRSPNP+++I+L ERCYCAD++YPMAVVGTAGRG+IIYQLEG P+EFKR+E PLKYQHRC+++F+DKK P G+ALGSVEGRVAIQY N +NPKDNFTFKCHRSNG NG+QDIYAVNDIAFHP HGTLATVGSDG FSFWDKDARTKLK SE M+QPIT C F+ NG IFAY+ SYDWS+GHEF+NP KKNYI+LRSC+DELKPR+ Sbjct: 3 NQTSTLGAVAPSNANPMKDFEVVSPPDDSISSLAFSPASIPQNFLVAGSWDCNVRCWEVEQSGKTVPKSMQTLGGPVLDVCWHDDGTKVFMASCDKMVKCWDLASNQSVQVAQHEAPVKTCHWVKGSNYSCLMTGSWDKTLKFWDTRSPNPLLTINLPERCYCADVDYPMAVVGTAGRGLIIYQLEGSPQEFKRVESPLKYQHRCVAIFRDKKKVPNGYALGSVEGRVAIQYVNPSNPKDNFTFKCHRSNGAPNGYQDIYAVNDIAFHPVHGTLATVGSDGTFSFWDKDARTKLKPSEPMEQPITRCCFNHNGQIFAYAVSYDWSKGHEFYNPMKKNYIFLRSCYDELKPRS 354
BLAST of mrna export factor vs. nr
Match: gi|665810268|ref|XP_008553546.1| (PREDICTED: mRNA export factor [Microplitis demolitor]) HSP 1 Score: 578.941 bits (1491), Expect = 0.000e+0 Identity = 262/352 (74.43%), Postives = 300/352 (85.23%), Query Frame = 0 Query: 23 NQPAGFGVGQPTSTNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNPKDNFTFKCHRSNGVNNGFQDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRA 374 NQ G G P+S NP KD EV S PDDS+S L+FSP S+ FL+AGSWD NVRCWE++ G++ PK+ Q+M GPILDVCWHDDGTKVFMASCDK VKCWDLASNQ+++VA H APVK+ W+K NY+ LMTGSWDKTLKFWDTRSPNP++ I+L ERCYCAD++YPMAVVGTAGRG+IIYQLEG P+EFKRIE PLKYQHRC+++FKDKK P G+ALGSVEGRVAIQY N NPKDNFTFKCHRSNG NG+QDIYAVNDIAFHP HGTLATVGSDG FSFWDKDARTKLK SE M+QPIT C F+ NG IFAY+ SYDWS+GHEF+NP KKNYI+LRSC++ELKPR+ Sbjct: 3 NQTTALGSGTPSSANPMKDFEVVSPPDDSISSLAFSPASIQQNFLVAGSWDCNVRCWEVEQTGKTVPKSMQTMGGPILDVCWHDDGTKVFMASCDKMVKCWDLASNQSVQVAAHDAPVKTCHWIKGTNYSCLMTGSWDKTLKFWDTRSPNPMLVINLPERCYCADVDYPMAVVGTAGRGLIIYQLEGTPQEFKRIESPLKYQHRCVAIFKDKKKVPNGYALGSVEGRVAIQYVNPVNPKDNFTFKCHRSNGTPNGYQDIYAVNDIAFHPVHGTLATVGSDGTFSFWDKDARTKLKPSEPMEQPITCCCFNHNGQIFAYAVSYDWSKGHEFYNPMKKNYIFLRSCYEELKPRS 354
BLAST of mrna export factor vs. nr
Match: gi|1000755627|ref|XP_015600750.1| (PREDICTED: mRNA export factor [Cephus cinctus] >gi|1000755629|ref|XP_015600751.1| PREDICTED: mRNA export factor [Cephus cinctus]) HSP 1 Score: 577.015 bits (1486), Expect = 0.000e+0 Identity = 262/352 (74.43%), Postives = 302/352 (85.80%), Query Frame = 0 Query: 23 NQPAGFGVGQPTSTNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNPKDNFTFKCHRSNGVNNGFQDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRA 374 NQ G G T++NP KD EV S PDDSVS L+FSP S+P FL+AGSWD NVRCWE++ +G++ PK+ Q+M GPILDVCW DDGTKVFMASCDK VKCWDLASNQ+++VA H APVK+ WVK NY+ LMTGSWDKTLKFWDTRSPNP+M+I+L ERCYCAD++YPMAVVGTAGRG+I+YQLEG P+E+KRIE PLK+QHRC+++F+DKK PTG+ALGSVEGRVAIQY N NPKDNFTFKCHRSNG NG+QDIYAVNDIAFHP HGTLATVGSDG FSFWDKDARTKLK SE M+Q IT C F+ NG IFAYS SYDWS+GHEF+NP KKNYI+LRSC+DELKPR+ Sbjct: 3 NQSGTLGTGASTTSNPMKDFEVVSPPDDSVSSLAFSPASIPQNFLVAGSWDCNVRCWEVEQSGKTVPKSMQNMGGPILDVCWSDDGTKVFMASCDKMVKCWDLASNQSVQVAAHDAPVKTCHWVKGSNYSCLMTGSWDKTLKFWDTRSPNPMMTINLPERCYCADVDYPMAVVGTAGRGLIVYQLEGTPQEYKRIESPLKFQHRCVAIFRDKKKSPTGYALGSVEGRVAIQYVNPANPKDNFTFKCHRSNGAPNGYQDIYAVNDIAFHPVHGTLATVGSDGTFSFWDKDARTKLKPSEPMEQSITRCCFNHNGQIFAYSVSYDWSKGHEFYNPMKKNYIFLRSCYDELKPRS 354
BLAST of mrna export factor vs. nr
Match: gi|1355985317|gb|PRD29972.1| (rae1 [Nephila clavipes]) HSP 1 Score: 576.244 bits (1484), Expect = 0.000e+0 Identity = 265/372 (71.24%), Postives = 305/372 (81.99%), Query Frame = 0 Query: 4 RREKARIAMFGTSSAFGGGNQPAGFGVGQPTSTNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNPKDNFTFKCHRSNGVNNGFQDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRAK 375 R E +++FG+ G G F + NP KD EV S PDDS+S L+FSP SLP FLIAGSWDN +RCWE+Q GQ+ PK QQ+ QGP+LDV W DDGTKVF ASCDK VK WDL SNQ + +A+H APVK+V W+KAPNY+ +MTGSWDKTLKFWDTR+PNP++ ++L ERCYCAD+ YPMAVVGTAGRGII+YQLEGQP+EFK+IE PLKYQHRC+S+F DKK QP GFALGSVEGRVAIQY N NPKDNFTFKCHRSNG +NG+QDIYAVNDIAFHP HGTLAT+GSDGRFSFWDKDARTKLKTS+ M+Q IT C F++ G IFAYS SYDWS+GHEF+NPQKKNYIYL SCF+ELKPR K Sbjct: 28 RSEIYNMSLFGSG---GFGTNTGVFNSTTTGTQNPMKDFEVVSPPDDSISSLAFSPASLPQNFLIAGSWDNQIRCWEVQNTGQTIPKAQQTHQGPVLDVAWSDDGTKVFSASCDKTVKMWDLNSNQAIPIAQHDAPVKTVHWIKAPNYSCIMTGSWDKTLKFWDTRTPNPMLVLNLPERCYCADVVYPMAVVGTAGRGIIVYQLEGQPQEFKKIESPLKYQHRCVSIFLDKKSQPCGFALGSVEGRVAIQYVNPQNPKDNFTFKCHRSNGTSNGYQDIYAVNDIAFHPVHGTLATIGSDGRFSFWDKDARTKLKTSDQMEQQITRCCFNARGEIFAYSVSYDWSKGHEFYNPQKKNYIYLHSCFEELKPRNK 396
BLAST of mrna export factor vs. nr
Match: gi|1339089052|ref|XP_023705654.1| (mRNA export factor [Cryptotermes secundus] >gi|1339089054|ref|XP_023705655.1| mRNA export factor [Cryptotermes secundus] >gi|1330918344|gb|PNF35583.1| mRNA export factor [Cryptotermes secundus] >gi|1330918345|gb|PNF35584.1| mRNA export factor [Cryptotermes secundus] >gi|1330918346|gb|PNF35585.1| mRNA export factor [Cryptotermes secundus]) HSP 1 Score: 575.474 bits (1482), Expect = 0.000e+0 Identity = 261/364 (71.70%), Postives = 307/364 (84.34%), Query Frame = 0 Query: 11 AMFGTSSAFGGGNQPAGFGVGQPTSTNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNPKDNFTFKCHRSNGVNNGFQDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRA 374 + G SS FG P+S NP KD EV S PDDS++ L+FSP ++ FLIAGSWDNNVRCWE++ +G++ PK+ Q+MQGP+LDVCW DDGTKVFMASCDK VKCWDL SNQT++VA H APVK+ WVK P Y+ LMTGSWDKTLKFWDTRSPNP+++I+L ER YCAD+++PMAVVGTAGRG+I+YQLEG+P+E+KRIE PLKYQHRC+++F+DKK PTG+ALGSVEGRVAIQY N NPKDNFTFKCHRSNG NG+QDIYAVNDIAFHP HGTLATVGSDG F+FWDKDARTKLK SEAM+QPIT C F+SNG IFAY+ SYDWS+GHEF++P KKNYI+LRSCFDELKPR+ Sbjct: 5 STLGASSGFGA--------TTTPSSANPMKDFEVTSPPDDSITSLAFSPATIQQNFLIAGSWDNNVRCWEVEQSGKTIPKSMQTMQGPVLDVCWSDDGTKVFMASCDKMVKCWDLNSNQTIQVAAHDAPVKTCHWVKGPTYSCLMTGSWDKTLKFWDTRSPNPMLTINLPERAYCADVDFPMAVVGTAGRGLIVYQLEGKPQEYKRIESPLKYQHRCVAIFRDKKKVPTGYALGSVEGRVAIQYVNPQNPKDNFTFKCHRSNGAPNGYQDIYAVNDIAFHPVHGTLATVGSDGSFNFWDKDARTKLKPSEAMEQPITRCCFNSNGQIFAYAVSYDWSKGHEFYSPMKKNYIFLRSCFDELKPRS 360
BLAST of mrna export factor vs. nr
Match: gi|1233164167|ref|XP_022183951.1| (mRNA export factor [Nilaparvata lugens]) HSP 1 Score: 573.548 bits (1477), Expect = 0.000e+0 Identity = 261/362 (72.10%), Postives = 304/362 (83.98%), Query Frame = 0 Query: 13 FGTSSAFGGGNQPAGFGVGQPTSTNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNPKDNFTFKCHRSNGVNNGFQDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRA 374 G+S+ FGG P++ NP KD EV S PDDSVS L+FSP S+ FLIAGSWDNNVRCWE++ +G++ PK+ QSMQGP+LDVCWHDDGTKVFMAS DK VKCWDLASNQT++VA H AP+K+ W+KAP YT LMTGSWDKTLKFWDTRSPNP++ I+L ERCYCAD+++PMAVVGTA RG+IIYQLE QP+E+KRI+ PLKYQHRC+++F+DKK PTG+ALGSVEGRVAIQY N NPKDNFTFKCHRSNG G+QDIYAVND+ FHP HGTLATVGSDG FSFWDKDARTKLK SE M+Q IT C+F+ NG IFAYS SYDW++GHEF+NP KKNYI+LRSCF+ELKPRA Sbjct: 7 LGSSTTFGGV-------AATPSTANPMKDFEVVSPPDDSVSALAFSPASIQQNFLIAGSWDNNVRCWEVEQSGKTIPKSMQSMQGPVLDVCWHDDGTKVFMASSDKMVKCWDLASNQTVQVAAHDAPIKTCHWIKAPQYTCLMTGSWDKTLKFWDTRSPNPMLIINLNERCYCADVDFPMAVVGTASRGLIIYQLETQPREYKRIDSPLKYQHRCVAIFRDKKKVPTGYALGSVEGRVAIQYVNPQNPKDNFTFKCHRSNGAPGGYQDIYAVNDVKFHPVHGTLATVGSDGTFSFWDKDARTKLKPSEPMEQSITKCAFNHNGQIFAYSVSYDWAKGHEFYNPMKKNYIFLRSCFEELKPRA 361
BLAST of mrna export factor vs. nr
Match: gi|1101353099|ref|XP_018902585.1| (PREDICTED: mRNA export factor [Bemisia tabaci]) HSP 1 Score: 571.622 bits (1472), Expect = 0.000e+0 Identity = 255/340 (75.00%), Postives = 297/340 (87.35%), Query Frame = 0 Query: 34 TSTNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNPKDNFTFKCHRSNGVNNGFQDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPR 373 TSTNP KD EV PDDSV+CL FSPPS+P FLIAGSWDNNVRCWEI+ +G++ PK+ QSMQGP+LDVCWHDDGTKVFMA+CDK VKCWDLASNQ+++VA H APVK+ WVK NY+ LMTGSWDKTLKFWDTRS P+++++L ERCYCAD++YPMAVV TA RG+IIYQLEG P+EFKR++ PLK+QHRC+++FKDKK QPTGFALGSVEGRVAIQY N NPK+NFTFKCHRSNG GFQDIYAVND+AFHP HGTLATVGSDG FSFWDKDARTKLK+S+ M+Q IT C+F+ NG IFAY+ SYDW++G +F+NP KKNYI+LRSCFDELKPR Sbjct: 20 TSTNPMKDFEVTPPPDDSVTCLQFSPPSIPQNFLIAGSWDNNVRCWEIEQSGKTVPKSMQSMQGPVLDVCWHDDGTKVFMAACDKMVKCWDLASNQSIQVAAHDAPVKTCHWVKGSNYSCLMTGSWDKTLKFWDTRSATPMLTLNLPERCYCADVDYPMAVVSTAARGLIIYQLEGTPQEFKRVDSPLKHQHRCLAIFKDKKKQPTGFALGSVEGRVAIQYVNPQNPKENFTFKCHRSNGATGGFQDIYAVNDVAFHPVHGTLATVGSDGTFSFWDKDARTKLKSSDTMEQSITCCAFNHNGQIFAYAVSYDWAKGRDFYNPLKKNYIFLRSCFDELKPR 359
BLAST of mrna export factor vs. nr
Match: gi|936704164|ref|XP_014230051.1| (mRNA export factor [Trichogramma pretiosum]) HSP 1 Score: 571.622 bits (1472), Expect = 0.000e+0 Identity = 256/338 (75.74%), Postives = 294/338 (86.98%), Query Frame = 0 Query: 37 NPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNPKDNFTFKCHRSNGVNNGFQDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRA 374 NP KD EV S PDDS+SC++FSP ++P FL+AGSWD+ VRCWE++ G++ PK+ QSM PILDVCW DDGTKVFMASCDKQVKCWDLASNQTM+VA H APVK+ W+K NYT LMTGSWDKTLKFWDTRSP P+++++L ERCYCAD++YPMAVVGTAGRG+I+YQLEG P E+KRIE PLKYQHRC+++F+DKK PTG+ALGSVEGRVAIQY N TNPKDNFTFKCHRSNG NG+QDIYAVNDIAFHP HGTLATVGSDG FSFWDKDARTKLK SE M+Q IT+C F+ NG IFAYS SYDWS+GHEF+NP KKNYI+LRSC+DELKPR Sbjct: 17 NPMKDFEVASPPDDSISCMAFSPATIPQNFLVAGSWDSQVRCWEVEQTGKTVPKSMQSMTEPILDVCWSDDGTKVFMASCDKQVKCWDLASNQTMQVAAHDAPVKTCHWIKGSNYTCLMTGSWDKTLKFWDTRSPTPMLTLNLPERCYCADVDYPMAVVGTAGRGLIVYQLEGTPHEYKRIESPLKYQHRCVAIFRDKKKVPTGYALGSVEGRVAIQYVNPTNPKDNFTFKCHRSNGAPNGYQDIYAVNDIAFHPVHGTLATVGSDGTFSFWDKDARTKLKPSEPMEQSITSCCFNHNGQIFAYSVSYDWSKGHEFYNPMKKNYIFLRSCYDELKPRT 354 The following BLAST results are available for this feature:
BLAST of mrna export factor vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 5
BLAST of mrna export factor vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of mrna export factor vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold125_size330479:257..3502- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold125_size330479-snap-gene-0.15 ID=maker-scaffold125_size330479-snap-gene-0.15|Name=mrna export factor|organism=Tigriopus kingsejongensis|type=gene|length=3246bp|location=Sequence derived from alignment at scaffold125_size330479:257..3502- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'mrna export factor' has the following synonyms
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