Tk05300, Tk05300 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk05300
Unique NameTk05300
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length355
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 162..224
e-value: 2.9E-23
score: 93.3
IPR001356Homeobox domainPFAMPF00046Homeoboxcoord: 163..219
e-value: 3.2E-20
score: 71.6
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 160..220
score: 20.277
IPR001356Homeobox domainCDDcd00086homeodomaincoord: 163..220
e-value: 5.72206E-22
score: 85.758
NoneNo IPR availableGENE3D1.10.10.60coord: 147..238
e-value: 1.3E-28
score: 100.4
NoneNo IPR availablePANTHERPTHR24326:SF120T-CELL LEUKEMIA HOMEOBOX PROTEIN 1coord: 14..291
NoneNo IPR availablePANTHERPTHR24326FAMILY NOT NAMEDcoord: 14..291
IPR017970Homeobox, conserved sitePROSITEPS00027HOMEOBOX_1coord: 195..218
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 145..220

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold337_size202799-processed-gene-0.1-mRNA-1snap_masked-scaffold337_size202799-processed-gene-0.1-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk05300 ID=Tk05300|Name=Tk05300|organism=Tigriopus kingsejongensis|type=polypeptide|length=355bp
MSTTIESTTDHMLPQSKHKQILSFSISNLLHGDHKTRTQSRTHEPCIAAE
SNSEEEDDCETLGTREDELITAKEPVLSQDSLAGDARSVIKVTAHRPLFV
PCSTGGGSFDFAPWLYRPLTLSPPSSGYPMPIPPNVLSSKFAGLPQPRRI
GHPYQNRTPPKRKKPRTSFSRLQICELEKRFHKQKYLASTERATLAKSLK
MTDAQVKTWFQNRRTKWRRQTAEEREQERQAATKYFLSMQLGSIGGVPAP
PLPPHGSLGSALVSQGKEMQALFGDTSSLSSLESLRPWTSSLVTIASSSW
HTIPDEEVKYMCGSTTLIGGSACFEDTFLPLVRAPTLRRLLIHHPRYESN
QFPGT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001356Homeobox_dom
IPR017970Homeobox_CS
IPR009057Homeobox-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
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