EMLSAG00000000180, EMLSAG00000000180-682946 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000000180
Unique NameEMLSAG00000000180-682946
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000000180 vs. L. salmonis peptides
Match: EMLSAP00000000180 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1027:4047:7527:1 gene:EMLSAG00000000180 transcript:EMLSAT00000000180 description:"maker-LSalAtl2s1027-snap-gene-0.10")

HSP 1 Score: 190.274 bits (482), Expect = 9.437e-64
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0 
Query:    1 MIFNQQLSYDPFVRYTMGASNSNQKELEHLLDKKCPAGIPANLALLSIGAAAAAGFAVILNELMMMRRKKRRLEEFEERIEKLFPNDNSGNY 92
            MIFNQQLSYDPFVRYTMGASNSNQKELEHLLDKKCPAGIPANLALLSIGAAAAAGFAVILNELMMMRRKKRRLEEFEERIEKLFPNDNSGNY
Sbjct:    1 MIFNQQLSYDPFVRYTMGASNSNQKELEHLLDKKCPAGIPANLALLSIGAAAAAGFAVILNELMMMRRKKRRLEEFEERIEKLFPNDNSGNY 92
The following BLAST results are available for this feature:
BLAST of EMLSAG00000000180 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000180 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000180 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000001809.437e-64100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1027:4047... [more]
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BLAST of EMLSAG00000000180 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000180 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000180 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000180 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1027supercontigLSalAtl2s1027:4047..7527 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s1027-snap-gene-0.10
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000000180 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000000180EMLSAT00000000180-696027Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1027:4047..7527+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000000180-682946 ID=EMLSAG00000000180-682946|Name=EMLSAG00000000180|organism=Lepeophtheirus salmonis|type=gene|length=3481bp|location=Sequence derived from alignment at LSalAtl2s1027:4047..7527+ (Lepeophtheirus salmonis)
ATGATATTTAACCAACAGGTAAGTAAATAAATACCCTTTTGGGTACAAAG
AAACGGTCACCGATTTGCTTTATGTTTTATGCTTTATCAGTATATTTCGG
TGTTTATTAACTGGTGTTCCGTGATAAAAAAAAGTGTACAAATCAATAAT
ATACAAATGTGAAATAAAAAAAAAATTATTGTATTCTGGAGATTTTTTTT
TAAATCACTGATATATATTAGTTATATAATTACGAATGATCTCATAAATT
GAAATTTGTTGATTACTTATTTTCATAATACTAGTTAAAATAAACCATAT
CTTTTGAATGCTCAAAATTATTTTAGCATATTCAATTGGTTTTTAGTACA
ATGAACCCTGTAAGAAATTTAATTTCCGGTTGAAGAAACTTTTATTGAGA
CTTGGAAAGTCATTCAATCATTTAGCACTTTTCTTACTACTTTATCCTCT
TCATTTCTTTCTTAGCTTTTTACTGAATGATTCTTGCATGACGGGATTAG
ATATCAATGGGAAAAAAATGTAAAAACATATTTTTTAGCTACCCAAAAAA
AAAAACAAGGAAATCATTATTTTTTGTAATTTTCATATTTAATCTCAGTT
GTCTTACGATCCTTTTGTCAGATACACGATGGGAGCAAGTAATAGTAATC
AAAAAGAGTTGGAGCATCTTCTGGACAAAAAATGCCCTGCAGGTATTCCT
GCTAACTTGGCTCTTTTATCAATTGGTGCAGCTGCTGCGGCAGGGTTTGC
AGTGATTCTTAATGAGCTCATGATGATGAGACGAAAGAAAAGGAGTCTTT
CCATTCGGAGGAAATCTGATGATCTGACTCTGAATCATATAGTTCAAGGT
ATGAAATATCTTTGTTATCGCACAGTGATATACTTAAACACATCAAAACC
TCATATATATTTTTGTAAATTGTCAATTTTCTACTAATTTTTCTCATTAT
TACTATTATTAACGTTAACTGTTTCATTCTGAATAAGCTACTTTTAAGCT
GTGAACAATTTTCTTCTAATAACACGACGTTATCAGCTCGCCCATATGAA
AATTTACAATGTAGCTGGCTGTCAATAGTAGTTTCGTGTATTTGTTTTTA
TCATATCAGTGATTTGAACGATGGATTCGAATTAACTCTTTTAAGTTTTA
TAATTTTTTTTGCTACAAACTCTAAAGGAATGGCTGAAACGTACTAAATT
TGTGTTAATAGAAAAATTATATATTGAAAAAAGTAGACAATCAACTATTA
ATCAGTATAAAATTTACAATTCTCAATTTATATAAAGAAAAGTTTGYCTG
CCATAAAGTATTCTGTCACCAGGTACTTTTGCAATGTAAAATGTCCTGGG
GCAAAATAGTTTAAGGTAAAAGTACCGTTTACTAAAAGTTTCGCTCCTGC
CTTTTTCTTGTGTCTTTTATTTATCACTGTGAGCGAAGAAGAATGGAATC
GGAGGCTCGTTTGACACATGGATATTTTTTTTTTTTTGAAAATCAGTTAA
TAAAWAAATTAGGTCAATAGTAATTTATCTATATTTATTGTTATTAGGGG
CCAGAAAAATATGTTAAGCTTTTTAGAAAAATATGTTGTGAATATGTGAA
GAAAAATGCCAAAATATGTAAGGGAAAAAAATGCCAAAAAATGTTCTTTG
TACTGTATTTTCCATATTCAATTTTGAATTTCTAAGCCTCGACAGCAAAG
GATTTTTCCTTTACTTTTTAGAAATTAATCTTGTGAATTCAATTAAAAGT
GTACATCCATGGATATTGAATAGTTTTTGAGAGAGTGGTTGATTATACCC
TCAGCACTTATAGCGAACCAAGAAGTGTTATCGTAATTTTTTTACAAAAA
TTGATTGTGTGGTCTTTATTTTATAGCTTAGGTAAAGAATAAAAGAAGGT
GATATACATGGGCTTAGTAGATTTGTCATGCAAAGCTGGGATATTGCTGC
TACAAAATTTATTTTACAAATTCAATATTTAAAAATGTATAATGAAGGAC
AAAATCCAACAATTTTTCTCTAAAAAATGTAAAATATCCTATATTTTTCC
ACTACTTAATTATTATTAATCTTCACTTGATTTTAAACTTTGTTACATTA
TTTTATAGGGACAAAAATATTTATAAAAAGGAAATAAATTATGCGAGCGA
AATGTGAGTACTTTAGAATTGCGTGACAATGAGATCTAAGACATACCAAT
ACATCAACGATTATGTACACTTAAAGCTTAACATATTATTTAAAAGAAAA
TGGAAGTACATTGTAGATATGTAGTCAGTCAACATAATAACAATTTCGAA
CAAAATGAAAATAATAGAAAATCACTTTTTTTTAAATTCATATATACATA
GGTGCATACTAATATTTCATACACATATTTGAGTCAATAATTCAAACTTT
CAGGATGCACTTAGATACACAAGGATGTTAGCTCTAGTTTATAAACTTTA
TTTGATTAGAGATACTTTTTTTTAAAGATAAAATCTATCATTTTCTCATT
CTATTATTACGACGATCAATTTTGCCCACTTTCAGTGCAATTTGCAGAGC
CTTTAAACGCTTAAAATGTTAATCTACGTCTTAGATGCACTAGTGATTAT
TTTATACTTTGATGTTTTCTCTTCGAGAATAAAATAATAATGATAACACC
TTGGAAAATAAAATAAAAACTTTTCAAGTTGCAACTACAAAAAGGTTTGC
ACTGGTCCAATATCATATTTTTTTACAACTATTGTGATGAAACTCCGAGC
AATGTAGAGTACAATCGTTAGTTGAATGATAATTCCATAGTTGGTGGGAA
ATTGGCTAACTACCATTTTCTTGTTTTTCATGTAGGAAAGATCACAAAAT
ACAATAAAAGATAAGATATGTTAAACGAAGAATTATTTGCAAGAATTTGC
TAACCACCCTATAACTTGAGGCCTTTTTTTATTTCTACTTTTTTGGAGGA
ACTGTTGAGAGATGCAACAAAAATGTTATGTATTTGTTCAAATATCCCCA
AATAGTGCTGTCACTTATTATTAGTTCATTTCATTTACTTTTCATTGCCT
ATAATAAATATTAAGAGAAACATATTCGTAAGAACAATAAAATCTATGTA
AAAAAAAAACATTTCCCATTATATATAAATTAGTACAAGTTAATTGATAA
TTTGAACATCTTAATATAACTAAATATTGACGAAAAAATTTATAATATCT
TATACTATTCCAGGACTCGAAGAATTTGAAGAGAGAATAGAAAAGCTTTT
TCCTAATGACAACTCTGGAAATTATTGAGTTGTACTTCAATTAGCATCCC
AAAGATTCAATTAATAATAATTATCAAAATACATTTAGAATCATTTAATT
AACGCCATCAAGTTATATTTTGTTATGAATATTGTGTTTTATAATATATG
TATATGTGAACATCAGGCAGTGGCTTAATGCATATGTTAAGTAAATATGC
ATGCTAAAATTACCAAATAGTTTAATTTCCA
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