EMLSAG00000004882, EMLSAG00000004882-687648 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000004882
Unique NameEMLSAG00000004882-687648
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000004882 vs. C. finmarchicus
Match: gi|592944490|gb|GAXK01014063.1| (TSA: Calanus finmarchicus comp9030_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 56.6102 bits (135), Expect = 2.027e-9
Identity = 33/103 (32.04%), Postives = 49/103 (47.57%), Query Frame = 0 
Query:    4 YFLNLAKAEEDIYMAWKDISLR-----------------------KAIEGAGRVSSEDEGFERVLRDENILFAFVHDV------------YSSISETFGEQLF 71
            YF N+A AEED+Y  WKD++L                        + I+ +G V+S +EGF++VL + N  FAFVHD             ++ + E F EQ +
Sbjct:  448 YFQNMANAEEDLYRVWKDLTLNSSGDQSKYRVWDYPIKEQYTHIYQVIQNSGMVNSSEEGFQKVLDNTNGEFAFVHDASEIRYEFYNNCNFTEVGEPFAEQPY 756
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BLAST of EMLSAG00000004882 vs. C. finmarchicus
Match: gi|592869059|gb|GAXK01088503.1| (TSA: Calanus finmarchicus comp1226791_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 31.5722 bits (70), Expect = 2.526e-1
Identity = 13/28 (46.43%), Postives = 19/28 (67.86%), Query Frame = 0 
Query:   57 DVYSSI-SETFGEQLFVKESSFPSLFWY 83
            DV  +I S+  G Q+ V++S FP +FWY
Sbjct:  605 DVVKAIHSDVLGPQMSVQDSPFPQVFWY 688
[Close]
BLAST of EMLSAG00000004882 vs. C. finmarchicus
Match: gi|592869060|gb|GAXK01088502.1| (TSA: Calanus finmarchicus comp1226791_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 31.5722 bits (70), Expect = 2.559e-1
Identity = 13/28 (46.43%), Postives = 19/28 (67.86%), Query Frame = 0 
Query:   57 DVYSSI-SETFGEQLFVKESSFPSLFWY 83
            DV  +I S+  G Q+ V++S FP +FWY
Sbjct:  674 DVVKAIHSDVLGPQMSVQDSPFPQVFWY 757
[Close]
BLAST of EMLSAG00000004882 vs. C. finmarchicus
Match: gi|592802774|gb|GAXK01151794.1| (TSA: Calanus finmarchicus comp227907_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 27.335 bits (59), Expect = 7.359e+0
Identity = 14/33 (42.42%), Postives = 17/33 (51.52%), Query Frame = 0 
Query:   18 AWKDISLRKAIEGAGRVSSEDEGFERVLRDENI 50
            AW  + +     G   V+ E EG E VLRDE I
Sbjct:  973 AWSSLFITPESAGEVTVTCEVEGQEEVLRDEKI 1071
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BLAST of EMLSAG00000004882 vs. C. finmarchicus
Match: gi|592802775|gb|GAXK01151793.1| (TSA: Calanus finmarchicus comp227907_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 27.335 bits (59), Expect = 7.367e+0
Identity = 14/33 (42.42%), Postives = 17/33 (51.52%), Query Frame = 0 
Query:   18 AWKDISLRKAIEGAGRVSSEDEGFERVLRDENI 50
            AW  + +     G   V+ E EG E VLRDE I
Sbjct: 1163 AWSSLFITPESAGEVTVTCEVEGQEEVLRDEKI 1261
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BLAST of EMLSAG00000004882 vs. L. salmonis peptides
Match: EMLSAP00000004882 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2572:7738:8144:-1 gene:EMLSAG00000004882 transcript:EMLSAT00000004882 description:"maker-LSalAtl2s2572-snap-gene-0.2")

HSP 1 Score: 176.022 bits (445), Expect = 2.288e-58
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0 
Query:    1 MHSYFLNLAKAEEDIYMAWKDISLRKAIEGAGRVSSEDEGFERVLRDENILFAFVHDVYSSISETFGEQLFVKESSFPSLFWYMKG 86
            MHSYFLNLAKAEEDIYMAWKDISLRKAIEGAGRVSSEDEGFERVLRDENILFAFVHDVYSSISETFGEQLFVKESSFPSLFWYMKG
Sbjct:    1 MHSYFLNLAKAEEDIYMAWKDISLRKAIEGAGRVSSEDEGFERVLRDENILFAFVHDVYSSISETFGEQLFVKESSFPSLFWYMKG 86
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BLAST of EMLSAG00000004882 vs. L. salmonis peptides
Match: EMLSAP00000007404 (pep:novel supercontig:LSalAtl2s:LSalAtl2s4218:2116:3017:-1 gene:EMLSAG00000007404 transcript:EMLSAT00000007404 description:"maker-LSalAtl2s4218-snap-gene-0.3")

HSP 1 Score: 108.227 bits (269), Expect = 1.944e-30
Identity = 49/59 (83.05%), Postives = 56/59 (94.92%), Query Frame = 0 
Query:    1 MHSYFLNLAKAEEDIYMAWKDISLRKAIEGAGRVSSEDEGFERVLRDENILFAFVHDVY 59
            +H YFLNLAKAE+DIYMAWKDI L+KAIEGAG VSSEDEGF+RVL+DENILFAF++DVY
Sbjct:  151 IHGYFLNLAKAEDDIYMAWKDIFLKKAIEGAGTVSSEDEGFQRVLKDENILFAFIYDVY 209
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BLAST of EMLSAG00000004882 vs. L. salmonis peptides
Match: EMLSAP00000004884 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2576:7815:8450:-1 gene:EMLSAG00000004884 transcript:EMLSAT00000004884 description:"snap_masked-LSalAtl2s2576-processed-gene-0.2")

HSP 1 Score: 96.2857 bits (238), Expect = 3.672e-27
Identity = 52/85 (61.18%), Postives = 60/85 (70.59%), Query Frame = 0 
Query:   17 MAWKDISLR--------------------KAIEGAGRVSSEDEGFERVLRDENILFAFVHDVYSSISETFGEQLFVKESSFPSLF 81
            MAWK+I L+                    +AIEGAG V SE+EGFERVL+DENIL AF+HDVY+SISETFGE+LFVKESSFP LF
Sbjct:    1 MAWKEIFLKSKKNSYSRVWNYPVKQKFQQEAIEGAGTVRSEEEGFERVLKDENILSAFIHDVYASISETFGEKLFVKESSFPLLF 85
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BLAST of EMLSAG00000004882 vs. L. salmonis peptides
Match: EMLSAP00000001287 (pep:novel supercontig:LSalAtl2s:LSalAtl2s12140:100:1160:1 gene:EMLSAG00000001287 transcript:EMLSAT00000001287 description:"maker-LSalAtl2s12140-augustus-gene-0.2")

HSP 1 Score: 97.4413 bits (241), Expect = 1.467e-26
Identity = 46/60 (76.67%), Postives = 53/60 (88.33%), Query Frame = 0 
Query:    1 MHSYFLNLAKAEEDIYMAWKDISLRKAIEGAGRVSSEDEGFERVLRDENILFAFVHDVYS 60
            +H YFLNLAKAE+DIY AWKDISL+K   GAG VS+EDEGFERVL+DEN LFAF+HDVY+
Sbjct:   36 VHGYFLNLAKAEDDIYTAWKDISLKK---GAGTVSNEDEGFERVLKDENGLFAFIHDVYN 92
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BLAST of EMLSAG00000004882 vs. L. salmonis peptides
Match: EMLSAP00000003320 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1826:739:1434:1 gene:EMLSAG00000003320 transcript:EMLSAT00000003320 description:"snap_masked-LSalAtl2s1826-processed-gene-0.1")

HSP 1 Score: 94.7449 bits (234), Expect = 2.773e-25
Identity = 49/80 (61.25%), Postives = 55/80 (68.75%), Query Frame = 0 
Query:    1 MHSYFLNLAKAEEDIYMAWKDISLR----------------------KAIEGAGRVSSEDEGFERVLRDENILFAFVHDV 58
            +HSYFLNLAKAE+DIYMAWKDI L+                      +AIEGAG VSSEDEGFERVL+DENILF F+HDV
Sbjct:  131 IHSYFLNLAKAEDDIYMAWKDIFLKSKKYSYSGVWNYPVKKKFQQVVEAIEGAGTVSSEDEGFERVLKDENILFKFIHDV 210
[Close]
BLAST of EMLSAG00000004882 vs. L. salmonis peptides
Match: EMLSAP00000002689 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1550:26640:27467:1 gene:EMLSAG00000002689 transcript:EMLSAT00000002689 description:"snap_masked-LSalAtl2s1550-processed-gene-0.1")

HSP 1 Score: 95.1301 bits (235), Expect = 3.570e-25
Identity = 49/80 (61.25%), Postives = 55/80 (68.75%), Query Frame = 0 
Query:    1 MHSYFLNLAKAEEDIYMAWKDISLR----------------------KAIEGAGRVSSEDEGFERVLRDENILFAFVHDV 58
            +HSYFLNLAKAE+DIYMAWKDI L+                      +AIEGAG VSSEDEGFERVL+DENILF F+HDV
Sbjct:  176 IHSYFLNLAKAEDDIYMAWKDIFLKSKKNSYSGVWNYPVKQKFQQVVEAIEGAGTVSSEDEGFERVLKDENILFTFIHDV 255
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BLAST of EMLSAG00000004882 vs. L. salmonis peptides
Match: EMLSAP00000002010 (pep:novel supercontig:LSalAtl2s:LSalAtl2s135:603966:612944:-1 gene:EMLSAG00000002010 transcript:EMLSAT00000002010 description:"maker-LSalAtl2s135-augustus-gene-6.16")

HSP 1 Score: 90.5077 bits (223), Expect = 1.727e-22
Identity = 53/102 (51.96%), Postives = 59/102 (57.84%), Query Frame = 0 
Query:    2 HSYFLNLAKAEEDIYMAWKDISLR----------------------KAIEGAGRVSSEDEGFERVLRDENILFAFVHDV------------YSSISETFGEQ 69
            H YF+NLAKAE D+Y AWKDISL+                      K+IE AG  SS DEGFERVL DEN LFAF+HDV            YSS+SETFGEQ
Sbjct:  489 HEYFMNLAKAENDLYGAWKDISLKNKNNRYSRVWNYPVKEKFQLLLKSIEEAGTASSMDEGFERVLNDENGLFAFIHDVNNVRYRFYTNCSYSSMSETFGEQ 590
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BLAST of EMLSAG00000004882 vs. L. salmonis peptides
Match: EMLSAP00000005265 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2818:8763:9087:-1 gene:EMLSAG00000005265 transcript:EMLSAT00000005265 description:"maker-LSalAtl2s2818-snap-gene-0.3")

HSP 1 Score: 78.9518 bits (193), Expect = 1.346e-20
Identity = 43/74 (58.11%), Postives = 47/74 (63.51%), Query Frame = 0 
Query:   17 MAWKDISLR----------------------KAIEGAGRVSSEDEGFERVLRDENILFAFVHDVYSSISETFGE 68
            MAWKDI L+                      + IEGAG VSSEDEGFER L+DENILF F+HDVYSSISETFGE
Sbjct:    1 MAWKDIFLKSKKNSYSRDWNYPVKQKFQQVVEVIEGAGTVSSEDEGFERALKDENILFVFIHDVYSSISETFGE 74
[Close]
BLAST of EMLSAG00000004882 vs. L. salmonis peptides
Match: EMLSAP00000009341 (pep:novel supercontig:LSalAtl2s:LSalAtl2s5980:2505:4328:1 gene:EMLSAG00000009341 transcript:EMLSAT00000009341 description:"maker-LSalAtl2s5980-augustus-gene-0.3")

HSP 1 Score: 77.411 bits (189), Expect = 4.863e-18
Identity = 41/76 (53.95%), Postives = 48/76 (63.16%), Query Frame = 0 
Query:    1 MHSYFLNLAKAEEDIYMAWKDISLR----------------------KAIEGAGRVSSEDEGFERVLRDENILFAF 54
            +H YFLNLAKAE+DIY AWKDISL+                      + I+GAG VS+EDEGFERVL+D N LFAF
Sbjct:  443 LHGYFLNLAKAEDDIYTAWKDISLKSKKNIYSRVWNYPVXPKFQQLLEXIDGAGTVSNEDEGFERVLKDXNRLFAF 518
[Close]
BLAST of EMLSAG00000004882 vs. L. salmonis peptides
Match: EMLSAP00000007754 (pep:novel supercontig:LSalAtl2s:LSalAtl2s452:621419:622662:-1 gene:EMLSAG00000007754 transcript:EMLSAT00000007754 description:"maker-LSalAtl2s452-snap-gene-5.18")

HSP 1 Score: 64.3142 bits (155), Expect = 1.106e-13
Identity = 36/69 (52.17%), Postives = 41/69 (59.42%), Query Frame = 0 
Query:    1 MHSYFLNLAKAEEDIYMAWKDISLR----------------------KAIEGAGRVSSEDEGFERVLRD 47
            +  YFLNLAKAE+DIYMAWK ISL                       +AIEGAG VSSEDEGF+R L+D
Sbjct:  281 IKGYFLNLAKAEDDIYMAWKGISLNSKKYSYSQVWNYPVKQKFQQLLEAIEGAGTVSSEDEGFKRALKD 349
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BLAST of EMLSAG00000004882 vs. Select Arthropod Genomes
Match: XP_016772436.1 (PREDICTED: glutamate receptor ionotropic, kainate 2 [Apis mellifera])

HSP 1 Score: 50.447 bits (119), Expect = 5.026e-8
Identity = 30/105 (28.57%), Postives = 45/105 (42.86%), Query Frame = 0 
Query:    2 HSYFLNLAKAEEDIYMAWKDISLR-----------------------KAIEGAGRVSSEDEGFERVLRDENILFAFVHDV------------YSSISETFGEQLF 71
            H YF+N+  AE+ +Y  WK+I+L                        +AI   G V++  EGF +V+  EN  FAF+HD              + + E F EQ +
Sbjct:  641 HQYFINMKNAEDKLYTVWKEITLNNTSDEVEYRVWDYPIKEQYGHILQAITQVGPVANSVEGFRKVIESENAEFAFIHDSSEIRYEVTKNCNLTEVGEVFAEQPY 745
[Close]
BLAST of EMLSAG00000004882 vs. Select Arthropod Genomes
Match: XP_016772435.1 (PREDICTED: glutamate receptor ionotropic, kainate 2 [Apis mellifera])

HSP 1 Score: 50.447 bits (119), Expect = 5.026e-8
Identity = 30/105 (28.57%), Postives = 45/105 (42.86%), Query Frame = 0 
Query:    2 HSYFLNLAKAEEDIYMAWKDISLR-----------------------KAIEGAGRVSSEDEGFERVLRDENILFAFVHDV------------YSSISETFGEQLF 71
            H YF+N+  AE+ +Y  WK+I+L                        +AI   G V++  EGF +V+  EN  FAF+HD              + + E F EQ +
Sbjct:  641 HQYFINMKNAEDKLYTVWKEITLNNTSDEVEYRVWDYPIKEQYGHILQAITQVGPVANSVEGFRKVIESENAEFAFIHDSSEIRYEVTKNCNLTEVGEVFAEQPY 745
[Close]
BLAST of EMLSAG00000004882 vs. Select Arthropod Genomes
Match: XP_006561472.1 (PREDICTED: glutamate receptor ionotropic, kainate 2 [Apis mellifera])

HSP 1 Score: 50.447 bits (119), Expect = 5.026e-8
Identity = 30/105 (28.57%), Postives = 45/105 (42.86%), Query Frame = 0 
Query:    2 HSYFLNLAKAEEDIYMAWKDISLR-----------------------KAIEGAGRVSSEDEGFERVLRDENILFAFVHDV------------YSSISETFGEQLF 71
            H YF+N+  AE+ +Y  WK+I+L                        +AI   G V++  EGF +V+  EN  FAF+HD              + + E F EQ +
Sbjct:  641 HQYFINMKNAEDKLYTVWKEITLNNTSDEVEYRVWDYPIKEQYGHILQAITQVGPVANSVEGFRKVIESENAEFAFIHDSSEIRYEVTKNCNLTEVGEVFAEQPY 745
[Close]
BLAST of EMLSAG00000004882 vs. Select Arthropod Genomes
Match: EEB19912.1 (glutamate receptor, putative [Pediculus humanus corporis])

HSP 1 Score: 47.7506 bits (112), Expect = 4.315e-7
Identity = 26/79 (32.91%), Postives = 39/79 (49.37%), Query Frame = 0 
Query:    2 HSYFLNLAKAEEDIYMAWKDISLRK-----------------------AIEGAGRVSSEDEGFERVLRDENILFAFVHD 57
            HS+F+N+ KAE+ +Y AWK+++L                         AIE  G V +E  G ++VL  E   FAF+H+
Sbjct:  607 HSFFVNMKKAEDTLYQAWKNLALNATSDETQFRVWDYPIKEQYGHILLAIEQTGLVDNETVGIQKVLESETGEFAFIHN 685
[Close]
BLAST of EMLSAG00000004882 vs. nr
Match: gi|817185504|ref|XP_012287203.1| (PREDICTED: glutamate receptor ionotropic, kainate 3-like isoform X1 [Orussus abietinus] >gi|817185506|ref|XP_012287211.1| PREDICTED: glutamate receptor ionotropic, kainate 3-like isoform X1 [Orussus abietinus] >gi|817185508|ref|XP_012287217.1| PREDICTED: glutamate receptor ionotropic, kainate 3-like isoform X1 [Orussus abietinus])

HSP 1 Score: 56.225 bits (134), Expect = 2.225e-7
Identity = 29/80 (36.25%), Postives = 42/80 (52.50%), Query Frame = 0 
Query:    1 MHSYFLNLAKAEEDIYMAWKDISLR-----------------------KAIEGAGRVSSEDEGFERVLRDENILFAFVHD 57
            +H YF+N+ KAE+ +Y  WK+I+L                        +AI  AG V S +EGF++V+  EN  FAF+HD
Sbjct:  674 VHDYFINMKKAEDKLYTVWKEITLNSSTDQIEYRVWDYPIKEQYGHILQAIMQAGPVKSTEEGFQKVIDSENAEFAFIHD 753
[Close]
BLAST of EMLSAG00000004882 vs. nr
Match: gi|1000736154|ref|XP_015590562.1| (PREDICTED: glutamate receptor ionotropic, kainate 1 [Cephus cinctus])

HSP 1 Score: 56.225 bits (134), Expect = 2.523e-7
Identity = 28/80 (35.00%), Postives = 42/80 (52.50%), Query Frame = 0 
Query:    1 MHSYFLNLAKAEEDIYMAWKDISLR-----------------------KAIEGAGRVSSEDEGFERVLRDENILFAFVHD 57
            +H YF+N+  AE+ +Y  WK+I+L                        +AI  AG V+S +EGF++V+  EN  FAF+HD
Sbjct:  642 IHQYFINMKNAEDKLYTVWKEITLNSTSDQIEYRVWDYPIKEQYGHILQAITQAGPVASAEEGFQKVIASENAEFAFIHD 721
[Close]
BLAST of EMLSAG00000004882 vs. nr
Match: gi|817185510|ref|XP_012287218.1| (PREDICTED: glutamate receptor ionotropic, kainate 3-like isoform X2 [Orussus abietinus])

HSP 1 Score: 56.225 bits (134), Expect = 2.549e-7
Identity = 29/80 (36.25%), Postives = 42/80 (52.50%), Query Frame = 0 
Query:    1 MHSYFLNLAKAEEDIYMAWKDISLR-----------------------KAIEGAGRVSSEDEGFERVLRDENILFAFVHD 57
            +H YF+N+ KAE+ +Y  WK+I+L                        +AI  AG V S +EGF++V+  EN  FAF+HD
Sbjct:  655 VHDYFINMKKAEDKLYTVWKEITLNSSTDQIEYRVWDYPIKEQYGHILQAIMQAGPVKSTEEGFQKVIDSENAEFAFIHD 734
[Close]
BLAST of EMLSAG00000004882 vs. nr
Match: gi|939268721|ref|XP_014254521.1| (PREDICTED: glutamate receptor ionotropic, delta-1 isoform X2 [Cimex lectularius])

HSP 1 Score: 54.6842 bits (130), Expect = 8.295e-7
Identity = 36/105 (34.29%), Postives = 48/105 (45.71%), Query Frame = 0 
Query:    2 HSYFLNLAKAEEDIYMAWKDISLRK-----------------------AIEGAGRVSSEDEGFERVLRDENILFAFVHD-------VYSS-----ISETFGEQLF 71
            H+YF N+  AEE +Y  WK+I+L +                       AIE  G V+S +EGF +V  +EN  FA +HD       VYS      I E F EQ +
Sbjct:  473 HAYFRNMKNAEETLYNVWKEITLNRSVDQSKYRVWDYPIKEQYGRILIAIEKTGTVASMEEGFNKVKENENAEFALIHDALRIKYEVYSDCNLTEIGEPFAEQPY 577
[Close]
BLAST of EMLSAG00000004882 vs. nr
Match: gi|340727769|ref|XP_003402208.1| (PREDICTED: glutamate receptor ionotropic, kainate 2 [Bombus terrestris])

HSP 1 Score: 54.6842 bits (130), Expect = 8.628e-7
Identity = 27/80 (33.75%), Postives = 40/80 (50.00%), Query Frame = 0 
Query:    1 MHSYFLNLAKAEEDIYMAWKDISLR-----------------------KAIEGAGRVSSEDEGFERVLRDENILFAFVHD 57
            +H YF+N+  AE+ +YM WK+I+L                        +AI   G V +  EGF++V+  EN  FAF+HD
Sbjct:  641 VHQYFMNMKNAEDKLYMVWKEITLNSTSDQVEYRVWDYPIKEQYGHILQAITQVGPVVTSREGFQKVIESENAEFAFIHD 720
[Close]
BLAST of EMLSAG00000004882 vs. nr
Match: gi|939268719|ref|XP_014254520.1| (PREDICTED: glutamate receptor ionotropic, delta-1 isoform X1 [Cimex lectularius])

HSP 1 Score: 54.6842 bits (130), Expect = 8.869e-7
Identity = 36/105 (34.29%), Postives = 48/105 (45.71%), Query Frame = 0 
Query:    2 HSYFLNLAKAEEDIYMAWKDISLRK-----------------------AIEGAGRVSSEDEGFERVLRDENILFAFVHD-------VYSS-----ISETFGEQLF 71
            H+YF N+  AEE +Y  WK+I+L +                       AIE  G V+S +EGF +V  +EN  FA +HD       VYS      I E F EQ +
Sbjct:  612 HAYFRNMKNAEETLYNVWKEITLNRSVDQSKYRVWDYPIKEQYGRILIAIEKTGTVASMEEGFNKVKENENAEFALIHDALRIKYEVYSDCNLTEIGEPFAEQPY 716
[Close]
BLAST of EMLSAG00000004882 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold1253_size52701-processed-gene-0.2 (protein:Tk01374 transcript:snap_masked-scaffold1253_size52701-processed-gene-0.2-mRNA-1 annotation:"ionotropic receptor 8a")

HSP 1 Score: 46.595 bits (109), Expect = 9.496e-8
Identity = 30/103 (29.13%), Postives = 47/103 (45.63%), Query Frame = 0 
Query:    4 YFLNLAKAEEDIYMAWKDISLR-----------------------KAIEGAGRVSSEDEGFERVLRDENILFAFVHD-------VYSS-----ISETFGEQLF 71
            YF+N+A AE+++Y  WK+++L                        K I   G V +  EGF+ VL+D    +AF+HD       VY++     + E F EQ +
Sbjct:  613 YFVNMAGAEDELYHKWKELTLNSSGNPAKYRVWDYPIREQFTHILKIINDTGPVRTTQEGFDNVLKDHKGEYAFIHDAARIKYEVYNNCNLTEVGEPFAEQPY 715
[Close]
BLAST of EMLSAG00000004882 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold802_size95064-snap-gene-0.16 (protein:Tk01705 transcript:maker-scaffold802_size95064-snap-gene-0.16-mRNA-1 annotation:"olfactory ionotropic receptor ir8a")

HSP 1 Score: 44.669 bits (104), Expect = 2.877e-7
Identity = 29/99 (29.29%), Postives = 44/99 (44.44%), Query Frame = 0 
Query:    8 LAKAEEDIYMAWKDISLR-----------------------KAIEGAGRVSSEDEGFERVLRDENILFAFVHDV------------YSSISETFGEQLF 71
            +A AE ++Y  WK+++L                        K IEG+G V S + GFE+VL D +  FAF+HD             ++ + E F EQ +
Sbjct:    1 MAGAEAELYRVWKELTLSSEADQSKYRVWDYPIKEQYTHILKTIEGSGLVESAESGFEKVLADVDGNFAFIHDASQIKYEYYNNCNFTEVGEPFAEQPY 99
The following BLAST results are available for this feature:
BLAST of EMLSAG00000004882 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000004882 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 5
Match NameE-valueIdentityDescription
gi|592944490|gb|GAXK01014063.1|2.027e-932.04TSA: Calanus finmarchicus comp9030_c0_seq1 transcr... [more]
gi|592869059|gb|GAXK01088503.1|2.526e-146.43TSA: Calanus finmarchicus comp1226791_c0_seq2 tran... [more]
gi|592869060|gb|GAXK01088502.1|2.559e-146.43TSA: Calanus finmarchicus comp1226791_c0_seq1 tran... [more]
gi|592802774|gb|GAXK01151794.1|7.359e+042.42TSA: Calanus finmarchicus comp227907_c1_seq2 trans... [more]
gi|592802775|gb|GAXK01151793.1|7.367e+042.42TSA: Calanus finmarchicus comp227907_c1_seq1 trans... [more]
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BLAST of EMLSAG00000004882 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 11
Match NameE-valueIdentityDescription
EMLSAP000000048822.288e-58100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s2572:7738... [more]
EMLSAP000000074041.944e-3083.05pep:novel supercontig:LSalAtl2s:LSalAtl2s4218:2116... [more]
EMLSAP000000048843.672e-2761.18pep:novel supercontig:LSalAtl2s:LSalAtl2s2576:7815... [more]
EMLSAP000000012871.467e-2676.67pep:novel supercontig:LSalAtl2s:LSalAtl2s12140:100... [more]
EMLSAP000000033202.773e-2561.25pep:novel supercontig:LSalAtl2s:LSalAtl2s1826:739:... [more]
EMLSAP000000026893.570e-2561.25pep:novel supercontig:LSalAtl2s:LSalAtl2s1550:2664... [more]
EMLSAP000000020101.727e-2251.96pep:novel supercontig:LSalAtl2s:LSalAtl2s135:60396... [more]
EMLSAP000000052651.346e-2058.11pep:novel supercontig:LSalAtl2s:LSalAtl2s2818:8763... [more]
EMLSAP000000093414.863e-1853.95pep:novel supercontig:LSalAtl2s:LSalAtl2s5980:2505... [more]
EMLSAP000000077541.106e-1352.17pep:novel supercontig:LSalAtl2s:LSalAtl2s452:62141... [more]

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BLAST of EMLSAG00000004882 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000004882 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 4
Match NameE-valueIdentityDescription
XP_016772436.15.026e-828.57PREDICTED: glutamate receptor ionotropic, kainate ... [more]
XP_016772435.15.026e-828.57PREDICTED: glutamate receptor ionotropic, kainate ... [more]
XP_006561472.15.026e-828.57PREDICTED: glutamate receptor ionotropic, kainate ... [more]
EEB19912.14.315e-732.91glutamate receptor, putative [Pediculus humanus co... [more]
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BLAST of EMLSAG00000004882 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 6
Match NameE-valueIdentityDescription
gi|817185504|ref|XP_012287203.1|2.225e-736.25PREDICTED: glutamate receptor ionotropic, kainate ... [more]
gi|1000736154|ref|XP_015590562.1|2.523e-735.00PREDICTED: glutamate receptor ionotropic, kainate ... [more]
gi|817185510|ref|XP_012287218.1|2.549e-736.25PREDICTED: glutamate receptor ionotropic, kainate ... [more]
gi|939268721|ref|XP_014254521.1|8.295e-734.29PREDICTED: glutamate receptor ionotropic, delta-1 ... [more]
gi|340727769|ref|XP_003402208.1|8.628e-733.75PREDICTED: glutamate receptor ionotropic, kainate ... [more]
gi|939268719|ref|XP_014254520.1|8.869e-734.29PREDICTED: glutamate receptor ionotropic, delta-1 ... [more]
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BLAST of EMLSAG00000004882 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 2
Match NameE-valueIdentityDescription
snap_masked-scaffold1253_size52701-processed-gene-0.29.496e-829.13protein:Tk01374 transcript:snap_masked-scaffold125... [more]
maker-scaffold802_size95064-snap-gene-0.162.877e-729.29protein:Tk01705 transcript:maker-scaffold802_size9... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2572supercontigLSalAtl2s2572:7738..8144 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s2572-snap-gene-0.2
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000004882 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000004882EMLSAT00000004882-700729Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s2572:7738..8144-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000004882-687648 ID=EMLSAG00000004882-687648|Name=EMLSAG00000004882|organism=Lepeophtheirus salmonis|type=gene|length=407bp|location=Sequence derived from alignment at LSalAtl2s2572:7738..8144- (Lepeophtheirus salmonis)
ATGCATAGTTATTTTTTGAATTTGGCAAAGGCTGAGGAGGATATTTATAT
GGCATGGAAGGACATTTCCTTGAGGAGTAAGAAAAATAGTTGTTCACGCT
TTTGAAACTATCCAGTTTTAGAGGCAATAGAGGGAGCTGGTAGAGTTAGT
AGCGAGGATGAAGGATTTGAAAGGGTTCTAAGGGATGAAAATATACTTTT
TGCATTCGTTCATGATGTGTAAGACGTAAATATTCAACTTTCTCCACCCT
CAATTGAATAATAATTGTCATTCTATCACCCACCTGATAGGTCCGTTATT
AATTTTATTCAAATTGCAGTTACTCCTCCATAAGTGAGACCTTTGGTGAG
CAGCTGTTCGTCAAGGAATCATCATTTCCATCATTGTTCTGGTATATGAA
AGGATAG
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