EMLSAG00000005265, EMLSAG00000005265-688031 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000005265
Unique NameEMLSAG00000005265-688031
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000005265 vs. GO
Match: - (symbol:Ir8a "Ionotropic receptor 8a" species:7227 "Drosophila melanogaster" [GO:0016020 "membrane" evidence=ISS] [GO:0015277 "kainate selective glutamate receptor activity" evidence=ISS] [GO:0006811 "ion transport" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion channel activity" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=ISM] [GO:0015276 "ligand-gated ion channel activity" evidence=ISM] [GO:0050907 "detection of chemical stimulus involved in sensory perception" evidence=IEP] [GO:0071683 "sensory dendrite" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA] [GO:0007608 "sensory perception of smell" evidence=IMP] [GO:0043235 "receptor complex" evidence=IPI] InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00918 GO:GO:0016021 GO:GO:0005886 EMBL:AE014298 GO:GO:0035235 GO:GO:0043235 GO:GO:0015276 GO:GO:0007608 GO:GO:0071683 GO:GO:0005234 GO:GO:0004970 GeneTree:ENSGT00740000115107 KO:K05313 GO:GO:0050907 eggNOG:NOG315397 RefSeq:NP_727328.1 UniGene:Dm.26559 ProteinModelPortal:Q9W365 SMR:Q9W365 EnsemblMetazoa:FBtr0071333 GeneID:31867 KEGG:dme:Dmel_CG32704 UCSC:CG32704-RA CTD:31867 FlyBase:FBgn0052704 InParanoid:Q9W365 OMA:FWIEPVQ OrthoDB:EOG769ZJ2 PhylomeDB:Q9W365 GenomeRNAi:31867 NextBio:775730 Bgee:Q9W365 Uniprot:Q9W365)

HSP 1 Score: 43.8986 bits (102), Expect = 6.485e-5
Identity = 20/62 (32.26%), Postives = 34/62 (54.84%), Query Frame = 0 
Query:    3 WKDIFLKSKKNSYS-RDWNYPVKQKFQQVVEVIEGAGTVSSEDEGFERALKDENILFVFIHD 63
            WK++ L + K+    R W+YP+K+++  ++  I  +  V+   EGF      EN  + FIHD
Sbjct:  663 WKELALNASKDFKKFRIWDYPIKEQYGHILLAINSSQPVADAKEGFANVDAHENADYAFIHD 724
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BLAST of EMLSAG00000005265 vs. C. finmarchicus
Match: gi|592944490|gb|GAXK01014063.1| (TSA: Calanus finmarchicus comp9030_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 58.151 bits (139), Expect = 3.459e-10
Identity = 25/62 (40.32%), Postives = 42/62 (67.74%), Query Frame = 0 
Query:    3 WKDIFLKSKKN-SYSRDWNYPVKQKFQQVVEVIEGAGTVSSEDEGFERALKDENILFVFIHD 63
            WKD+ L S  + S  R W+YP+K+++  + +VI+ +G V+S +EGF++ L + N  F F+HD
Sbjct:  526 WKDLTLNSSGDQSKYRVWDYPIKEQYTHIYQVIQNSGMVNSSEEGFQKVLDNTNGEFAFVHD 711
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BLAST of EMLSAG00000005265 vs. C. finmarchicus
Match: gi|592957063|gb|GAXK01001493.1| (TSA: Calanus finmarchicus comp3099830_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 30.4166 bits (67), Expect = 3.867e-1
Identity = 15/51 (29.41%), Postives = 27/51 (52.94%), Query Frame = 0 
Query:    3 WKDIFLKSKKNSYSRD----WNYPVKQKFQQVVEVIEGAGTVSSEDEGFER 49
            WKD+ L    +S +R     W+YPV  K+ ++   +  +G   S ++ F+R
Sbjct:  257 WKDMSLDDSLSSLARSKLAVWDYPVSDKYTKIWTRMLESGLPDSTEDAFDR 409
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BLAST of EMLSAG00000005265 vs. C. finmarchicus
Match: gi|592814156|gb|GAXK01140412.1| (TSA: Calanus finmarchicus comp817883_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 27.7202 bits (60), Expect = 3.345e+0
Identity = 12/39 (30.77%), Postives = 22/39 (56.41%), Query Frame = 0 
Query:   10 SKKNSYSRDWNYPVKQKFQQVVEVIEGAGTVSSEDEGFE 48
            S  N    DW+ P ++K    +E+ +  G++S+ D GF+
Sbjct: 1174 SALNFLFHDWSCPTQRKKNIFLEIFQDFGSLSTFDLGFQ 1290
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BLAST of EMLSAG00000005265 vs. C. finmarchicus
Match: gi|592827282|gb|GAXK01129313.1| (TSA: Calanus finmarchicus comp2307003_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 26.5646 bits (57), Expect = 7.511e+0
Identity = 18/55 (32.73%), Postives = 26/55 (47.27%), Query Frame = 0 
Query:    7 FLKSKKNSYSRDWNYPVKQKFQQVVEVIEGAGTVSSEDEGFERALKDENILFVFI 61
            FLKS  +     WNYP  Q  Q  ++  +G  T      G +R++   N +FV I
Sbjct:  225 FLKSDNHKNGGKWNYPTNQ-VQITLKWFDGFST------GTDRSILLRNSIFVHI 368
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BLAST of EMLSAG00000005265 vs. L. salmonis peptides
Match: EMLSAP00000005265 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2818:8763:9087:-1 gene:EMLSAG00000005265 transcript:EMLSAT00000005265 description:"maker-LSalAtl2s2818-snap-gene-0.3")

HSP 1 Score: 152.14 bits (383), Expect = 2.564e-49
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0 
Query:    1 MAWKDIFLKSKKNSYSRDWNYPVKQKFQQVVEVIEGAGTVSSEDEGFERALKDENILFVFIHDVYSSISETFGE 74
            MAWKDIFLKSKKNSYSRDWNYPVKQKFQQVVEVIEGAGTVSSEDEGFERALKDENILFVFIHDVYSSISETFGE
Sbjct:    1 MAWKDIFLKSKKNSYSRDWNYPVKQKFQQVVEVIEGAGTVSSEDEGFERALKDENILFVFIHDVYSSISETFGE 74
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BLAST of EMLSAG00000005265 vs. L. salmonis peptides
Match: EMLSAP00000004884 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2576:7815:8450:-1 gene:EMLSAG00000004884 transcript:EMLSAT00000004884 description:"snap_masked-LSalAtl2s2576-processed-gene-0.2")

HSP 1 Score: 127.102 bits (318), Expect = 2.045e-39
Identity = 63/74 (85.14%), Postives = 66/74 (89.19%), Query Frame = 0 
Query:    1 MAWKDIFLKSKKNSYSRDWNYPVKQKFQQVVEVIEGAGTVSSEDEGFERALKDENILFVFIHDVYSSISETFGE 74
            MAWK+IFLKSKKNSYSR WNYPVKQKFQQ  E IEGAGTV SE+EGFER LKDENIL  FIHDVY+SISETFGE
Sbjct:    1 MAWKEIFLKSKKNSYSRVWNYPVKQKFQQ--EAIEGAGTVRSEEEGFERVLKDENILSAFIHDVYASISETFGE 72
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BLAST of EMLSAG00000005265 vs. L. salmonis peptides
Match: EMLSAP00000002689 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1550:26640:27467:1 gene:EMLSAG00000002689 transcript:EMLSAT00000002689 description:"snap_masked-LSalAtl2s1550-processed-gene-0.1")

HSP 1 Score: 124.02 bits (310), Expect = 2.373e-36
Identity = 59/64 (92.19%), Postives = 59/64 (92.19%), Query Frame = 0 
Query:    1 MAWKDIFLKSKKNSYSRDWNYPVKQKFQQVVEVIEGAGTVSSEDEGFERALKDENILFVFIHDV 64
            MAWKDIFLKSKKNSYS  WNYPVKQKFQQVVE IEGAGTVSSEDEGFER LKDENILF FIHDV
Sbjct:  192 MAWKDIFLKSKKNSYSGVWNYPVKQKFQQVVEAIEGAGTVSSEDEGFERVLKDENILFTFIHDV 255
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BLAST of EMLSAG00000005265 vs. L. salmonis peptides
Match: EMLSAP00000003320 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1826:739:1434:1 gene:EMLSAG00000003320 transcript:EMLSAT00000003320 description:"snap_masked-LSalAtl2s1826-processed-gene-0.1")

HSP 1 Score: 117.857 bits (294), Expect = 2.604e-34
Identity = 57/64 (89.06%), Postives = 58/64 (90.62%), Query Frame = 0 
Query:    1 MAWKDIFLKSKKNSYSRDWNYPVKQKFQQVVEVIEGAGTVSSEDEGFERALKDENILFVFIHDV 64
            MAWKDIFLKSKK SYS  WNYPVK+KFQQVVE IEGAGTVSSEDEGFER LKDENILF FIHDV
Sbjct:  147 MAWKDIFLKSKKYSYSGVWNYPVKKKFQQVVEAIEGAGTVSSEDEGFERVLKDENILFKFIHDV 210
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BLAST of EMLSAG00000005265 vs. L. salmonis peptides
Match: EMLSAP00000002010 (pep:novel supercontig:LSalAtl2s:LSalAtl2s135:603966:612944:-1 gene:EMLSAG00000002010 transcript:EMLSAT00000002010 description:"maker-LSalAtl2s135-augustus-gene-6.16")

HSP 1 Score: 103.99 bits (258), Expect = 2.050e-27
Identity = 54/85 (63.53%), Postives = 60/85 (70.59%), Query Frame = 0 
Query:    2 AWKDIFLKSKKNSYSRDWNYPVKQKFQQVVEVIEGAGTVSSEDEGFERALKDENILFVFIHDV------------YSSISETFGE 74
            AWKDI LK+K N YSR WNYPVK+KFQ +++ IE AGT SS DEGFER L DEN LF FIHDV            YSS+SETFGE
Sbjct:  505 AWKDISLKNKNNRYSRVWNYPVKEKFQLLLKSIEEAGTASSMDEGFERVLNDENGLFAFIHDVNNVRYRFYTNCSYSSMSETFGE 589
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BLAST of EMLSAG00000005265 vs. L. salmonis peptides
Match: EMLSAP00000009341 (pep:novel supercontig:LSalAtl2s:LSalAtl2s5980:2505:4328:1 gene:EMLSAG00000009341 transcript:EMLSAT00000009341 description:"maker-LSalAtl2s5980-augustus-gene-0.3")

HSP 1 Score: 94.7449 bits (234), Expect = 2.154e-24
Identity = 45/59 (76.27%), Postives = 49/59 (83.05%), Query Frame = 0 
Query:    2 AWKDIFLKSKKNSYSRDWNYPVKQKFQQVVEVIEGAGTVSSEDEGFERALKDENILFVF 60
            AWKDI LKSKKN YSR WNYPV  KFQQ++E I+GAGTVS+EDEGFER LKD N LF F
Sbjct:  460 AWKDISLKSKKNIYSRVWNYPVXPKFQQLLEXIDGAGTVSNEDEGFERVLKDXNRLFAF 518
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BLAST of EMLSAG00000005265 vs. L. salmonis peptides
Match: EMLSAP00000007754 (pep:novel supercontig:LSalAtl2s:LSalAtl2s452:621419:622662:-1 gene:EMLSAG00000007754 transcript:EMLSAT00000007754 description:"maker-LSalAtl2s452-snap-gene-5.18")

HSP 1 Score: 90.1225 bits (222), Expect = 2.041e-23
Identity = 43/53 (81.13%), Postives = 47/53 (88.68%), Query Frame = 0 
Query:    1 MAWKDIFLKSKKNSYSRDWNYPVKQKFQQVVEVIEGAGTVSSEDEGFERALKD 53
            MAWK I L SKK SYS+ WNYPVKQKFQQ++E IEGAGTVSSEDEGF+RALKD
Sbjct:  297 MAWKGISLNSKKYSYSQVWNYPVKQKFQQLLEAIEGAGTVSSEDEGFKRALKD 349
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BLAST of EMLSAG00000005265 vs. L. salmonis peptides
Match: EMLSAP00000004882 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2572:7738:8144:-1 gene:EMLSAG00000004882 transcript:EMLSAT00000004882 description:"maker-LSalAtl2s2572-snap-gene-0.2")

HSP 1 Score: 78.9518 bits (193), Expect = 1.158e-20
Identity = 43/74 (58.11%), Postives = 47/74 (63.51%), Query Frame = 0 
Query:    1 MAWKDIFLKSKKNSYSRDWNYPVKQKFQQVVEVIEGAGTVSSEDEGFERALKDENILFVFIHDVYSSISETFGE 74
            MAWKDI L+                      + IEGAG VSSEDEGFER L+DENILF F+HDVYSSISETFGE
Sbjct:   17 MAWKDISLR----------------------KAIEGAGRVSSEDEGFERVLRDENILFAFVHDVYSSISETFGE 68
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BLAST of EMLSAG00000005265 vs. L. salmonis peptides
Match: EMLSAP00000007404 (pep:novel supercontig:LSalAtl2s:LSalAtl2s4218:2116:3017:-1 gene:EMLSAG00000007404 transcript:EMLSAT00000007404 description:"maker-LSalAtl2s4218-snap-gene-0.3")

HSP 1 Score: 68.1662 bits (165), Expect = 8.400e-16
Identity = 37/65 (56.92%), Postives = 40/65 (61.54%), Query Frame = 0 
Query:    1 MAWKDIFLKSKKNSYSRDWNYPVKQKFQQVVEVIEGAGTVSSEDEGFERALKDENILFVFIHDVY 65
            MAWKDIFLK                      + IEGAGTVSSEDEGF+R LKDENILF FI+DVY
Sbjct:  167 MAWKDIFLK----------------------KAIEGAGTVSSEDEGFQRVLKDENILFAFIYDVY 209
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BLAST of EMLSAG00000005265 vs. L. salmonis peptides
Match: EMLSAP00000001287 (pep:novel supercontig:LSalAtl2s:LSalAtl2s12140:100:1160:1 gene:EMLSAG00000001287 transcript:EMLSAT00000001287 description:"maker-LSalAtl2s12140-augustus-gene-0.2")

HSP 1 Score: 57.7658 bits (138), Expect = 3.995e-12
Identity = 26/36 (72.22%), Postives = 31/36 (86.11%), Query Frame = 0 
Query:   31 VEVIEGAGTVSSEDEGFERALKDENILFVFIHDVYS 66
            + + +GAGTVS+EDEGFER LKDEN LF FIHDVY+
Sbjct:   57 ISLKKGAGTVSNEDEGFERVLKDENGLFAFIHDVYN 92
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BLAST of EMLSAG00000005265 vs. Select Arthropod Genomes
Match: XP_016772436.1 (PREDICTED: glutamate receptor ionotropic, kainate 2 [Apis mellifera])

HSP 1 Score: 51.6026 bits (122), Expect = 1.310e-8
Identity = 22/62 (35.48%), Postives = 38/62 (61.29%), Query Frame = 0 
Query:    3 WKDIFLKSKKNSYS-RDWNYPVKQKFQQVVEVIEGAGTVSSEDEGFERALKDENILFVFIHD 63
            WK+I L +  +    R W+YP+K+++  +++ I   G V++  EGF + ++ EN  F FIHD
Sbjct:  658 WKEITLNNTSDEVEYRVWDYPIKEQYGHILQAITQVGPVANSVEGFRKVIESENAEFAFIHD 719
[Close]
BLAST of EMLSAG00000005265 vs. Select Arthropod Genomes
Match: XP_016772435.1 (PREDICTED: glutamate receptor ionotropic, kainate 2 [Apis mellifera])

HSP 1 Score: 51.6026 bits (122), Expect = 1.310e-8
Identity = 22/62 (35.48%), Postives = 38/62 (61.29%), Query Frame = 0 
Query:    3 WKDIFLKSKKNSYS-RDWNYPVKQKFQQVVEVIEGAGTVSSEDEGFERALKDENILFVFIHD 63
            WK+I L +  +    R W+YP+K+++  +++ I   G V++  EGF + ++ EN  F FIHD
Sbjct:  658 WKEITLNNTSDEVEYRVWDYPIKEQYGHILQAITQVGPVANSVEGFRKVIESENAEFAFIHD 719
[Close]
BLAST of EMLSAG00000005265 vs. Select Arthropod Genomes
Match: XP_006561472.1 (PREDICTED: glutamate receptor ionotropic, kainate 2 [Apis mellifera])

HSP 1 Score: 51.6026 bits (122), Expect = 1.310e-8
Identity = 22/62 (35.48%), Postives = 38/62 (61.29%), Query Frame = 0 
Query:    3 WKDIFLKSKKNSYS-RDWNYPVKQKFQQVVEVIEGAGTVSSEDEGFERALKDENILFVFIHD 63
            WK+I L +  +    R W+YP+K+++  +++ I   G V++  EGF + ++ EN  F FIHD
Sbjct:  658 WKEITLNNTSDEVEYRVWDYPIKEQYGHILQAITQVGPVANSVEGFRKVIESENAEFAFIHD 719
[Close]
BLAST of EMLSAG00000005265 vs. Select Arthropod Genomes
Match: EAA07123.4 (AGAP010411-PA, partial [Anopheles gambiae str. PEST])

HSP 1 Score: 46.9802 bits (110), Expect = 6.369e-7
Identity = 21/62 (33.87%), Postives = 36/62 (58.06%), Query Frame = 0 
Query:    3 WKDIFLKSKKNSYS-RDWNYPVKQKFQQVVEVIEGAGTVSSEDEGFERALKDENILFVFIHD 63
            W+++ L S  +    R W+YP+K+++  ++  IE A  V++  EGF R  +  +  F FIHD
Sbjct:  580 WRNLTLSSGNDQAQYRVWDYPIKEQYINILSAIESANPVATAAEGFRRVNERLDADFAFIHD 641
[Close]
BLAST of EMLSAG00000005265 vs. Select Arthropod Genomes
Match: EEB19912.1 (glutamate receptor, putative [Pediculus humanus corporis])

HSP 1 Score: 46.9802 bits (110), Expect = 6.705e-7
Identity = 21/63 (33.33%), Postives = 37/63 (58.73%), Query Frame = 0 
Query:    2 AWKDIFLKSKKNSYS-RDWNYPVKQKFQQVVEVIEGAGTVSSEDEGFERALKDENILFVFIHD 63
            AWK++ L +  +    R W+YP+K+++  ++  IE  G V +E  G ++ L+ E   F FIH+
Sbjct:  623 AWKNLALNATSDETQFRVWDYPIKEQYGHILLAIEQTGLVDNETVGIQKVLESETGEFAFIHN 685
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BLAST of EMLSAG00000005265 vs. nr
Match: gi|1000736154|ref|XP_015590562.1| (PREDICTED: glutamate receptor ionotropic, kainate 1 [Cephus cinctus])

HSP 1 Score: 58.151 bits (139), Expect = 3.599e-8
Identity = 25/62 (40.32%), Postives = 40/62 (64.52%), Query Frame = 0 
Query:    3 WKDIFLKSKKNSYS-RDWNYPVKQKFQQVVEVIEGAGTVSSEDEGFERALKDENILFVFIHD 63
            WK+I L S  +    R W+YP+K+++  +++ I  AG V+S +EGF++ +  EN  F FIHD
Sbjct:  660 WKEITLNSTSDQIEYRVWDYPIKEQYGHILQAITQAGPVASAEEGFQKVIASENAEFAFIHD 721
[Close]
BLAST of EMLSAG00000005265 vs. nr
Match: gi|645015117|ref|XP_008206325.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC100121319 [Nasonia vitripennis])

HSP 1 Score: 57.7658 bits (138), Expect = 4.648e-8
Identity = 25/62 (40.32%), Postives = 39/62 (62.90%), Query Frame = 0 
Query:    3 WKDIFLKSKKNSYS-RDWNYPVKQKFQQVVEVIEGAGTVSSEDEGFERALKDENILFVFIHD 63
            WK+I L S  +    R W+YP+K+++  +++ I   GTV S +EGF++ +  EN  F FIHD
Sbjct:  707 WKEITLNSTSDQVEYRVWDYPIKEQYGHILQAITQVGTVKSSEEGFQKVIDSENAEFAFIHD 768
[Close]
BLAST of EMLSAG00000005265 vs. nr
Match: gi|478733528|gb|AGJ51189.1| (olfactory ionotropic receptor IR8a [Panulirus argus])

HSP 1 Score: 56.9954 bits (136), Expect = 8.245e-8
Identity = 26/62 (41.94%), Postives = 41/62 (66.13%), Query Frame = 0 
Query:    3 WKDIFLKSKKN-SYSRDWNYPVKQKFQQVVEVIEGAGTVSSEDEGFERALKDENILFVFIHD 63
            WK++ L S  + S  R W+YPVK+++  +++VIE +G V + + GF+R L + N  F FIHD
Sbjct:  642 WKELTLNSTSDQSKYRVWDYPVKEQYTHILQVIEESGPVDTAEVGFQRVLDNANGEFAFIHD 703
[Close]
BLAST of EMLSAG00000005265 vs. nr
Match: gi|817185504|ref|XP_012287203.1| (PREDICTED: glutamate receptor ionotropic, kainate 3-like isoform X1 [Orussus abietinus] >gi|817185506|ref|XP_012287211.1| PREDICTED: glutamate receptor ionotropic, kainate 3-like isoform X1 [Orussus abietinus] >gi|817185508|ref|XP_012287217.1| PREDICTED: glutamate receptor ionotropic, kainate 3-like isoform X1 [Orussus abietinus])

HSP 1 Score: 56.9954 bits (136), Expect = 8.767e-8
Identity = 25/62 (40.32%), Postives = 39/62 (62.90%), Query Frame = 0 
Query:    3 WKDIFLKSKKNSYS-RDWNYPVKQKFQQVVEVIEGAGTVSSEDEGFERALKDENILFVFIHD 63
            WK+I L S  +    R W+YP+K+++  +++ I  AG V S +EGF++ +  EN  F FIHD
Sbjct:  692 WKEITLNSSTDQIEYRVWDYPIKEQYGHILQAIMQAGPVKSTEEGFQKVIDSENAEFAFIHD 753
[Close]
BLAST of EMLSAG00000005265 vs. nr
Match: gi|1059875384|ref|XP_017792800.1| (PREDICTED: ionotropic receptor 25a [Habropoda laboriosa])

HSP 1 Score: 56.9954 bits (136), Expect = 9.469e-8
Identity = 24/62 (38.71%), Postives = 39/62 (62.90%), Query Frame = 0 
Query:    3 WKDIFLKSKKNSYS-RDWNYPVKQKFQQVVEVIEGAGTVSSEDEGFERALKDENILFVFIHD 63
            WK+I L S  +    R W+YP+K+++  +++ I   G V S +EGF + ++ EN+ F FIHD
Sbjct:  660 WKEITLNSTSDQVQYRVWDYPIKEQYGHILQAITQVGLVKSSEEGFRKVIESENVEFAFIHD 721
[Close]
BLAST of EMLSAG00000005265 vs. nr
Match: gi|817185510|ref|XP_012287218.1| (PREDICTED: glutamate receptor ionotropic, kainate 3-like isoform X2 [Orussus abietinus])

HSP 1 Score: 56.9954 bits (136), Expect = 9.475e-8
Identity = 25/62 (40.32%), Postives = 39/62 (62.90%), Query Frame = 0 
Query:    3 WKDIFLKSKKNSYS-RDWNYPVKQKFQQVVEVIEGAGTVSSEDEGFERALKDENILFVFIHD 63
            WK+I L S  +    R W+YP+K+++  +++ I  AG V S +EGF++ +  EN  F FIHD
Sbjct:  673 WKEITLNSSTDQIEYRVWDYPIKEQYGHILQAIMQAGPVKSTEEGFQKVIDSENAEFAFIHD 734
[Close]
BLAST of EMLSAG00000005265 vs. nr
Match: gi|972186168|ref|XP_015174609.1| (PREDICTED: glutamate receptor ionotropic, kainate 3 [Polistes dominula])

HSP 1 Score: 56.6102 bits (135), Expect = 1.097e-7
Identity = 25/63 (39.68%), Postives = 39/63 (61.90%), Query Frame = 0 
Query:    2 AWKDIFLKSKKNSYS-RDWNYPVKQKFQQVVEVIEGAGTVSSEDEGFERALKDENILFVFIHD 63
            AWK+I L S  +    R W+YP+K+++  +++ I   G V S +EGF + ++ EN  F FIHD
Sbjct:  657 AWKEITLNSTSDQVEYRVWDYPIKEQYGHILQAITQVGPVKSMEEGFRKVIESENAEFAFIHD 719
[Close]
BLAST of EMLSAG00000005265 vs. nr
Match: gi|915659850|gb|KOC62738.1| (Glutamate receptor, ionotropic kainate 2 [Habropoda laboriosa])

HSP 1 Score: 56.6102 bits (135), Expect = 1.151e-7
Identity = 24/62 (38.71%), Postives = 39/62 (62.90%), Query Frame = 0 
Query:    3 WKDIFLKSKKNSYS-RDWNYPVKQKFQQVVEVIEGAGTVSSEDEGFERALKDENILFVFIHD 63
            WK+I L S  +    R W+YP+K+++  +++ I   G V S +EGF + ++ EN+ F FIHD
Sbjct:  640 WKEITLNSTSDQVQYRVWDYPIKEQYGHILQAITQVGLVKSSEEGFRKVIESENVEFAFIHD 701
[Close]
BLAST of EMLSAG00000005265 vs. nr
Match: gi|340727769|ref|XP_003402208.1| (PREDICTED: glutamate receptor ionotropic, kainate 2 [Bombus terrestris])

HSP 1 Score: 55.8398 bits (133), Expect = 1.823e-7
Identity = 24/64 (37.50%), Postives = 39/64 (60.94%), Query Frame = 0 
Query:    1 MAWKDIFLKSKKNSYS-RDWNYPVKQKFQQVVEVIEGAGTVSSEDEGFERALKDENILFVFIHD 63
            M WK+I L S  +    R W+YP+K+++  +++ I   G V +  EGF++ ++ EN  F FIHD
Sbjct:  657 MVWKEITLNSTSDQVEYRVWDYPIKEQYGHILQAITQVGPVVTSREGFQKVIESENAEFAFIHD 720
[Close]
BLAST of EMLSAG00000005265 vs. nr
Match: gi|954558667|ref|XP_014603029.1| (PREDICTED: uncharacterized protein LOC106786313 [Polistes canadensis])

HSP 1 Score: 55.4546 bits (132), Expect = 3.119e-7
Identity = 24/63 (38.10%), Postives = 39/63 (61.90%), Query Frame = 0 
Query:    2 AWKDIFLKSKKNSYS-RDWNYPVKQKFQQVVEVIEGAGTVSSEDEGFERALKDENILFVFIHD 63
            AWK+I L S  +    R W+YP+K+++  +++ I   G V + +EGF++ +  EN  F FIHD
Sbjct:  638 AWKEITLNSTSDQVEYRVWDYPIKEQYGHILQAITQVGPVKTMEEGFKKVIDSENAEFAFIHD 700
[Close]
BLAST of EMLSAG00000005265 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold802_size95064-snap-gene-0.16 (protein:Tk01705 transcript:maker-scaffold802_size95064-snap-gene-0.16-mRNA-1 annotation:"olfactory ionotropic receptor ir8a")

HSP 1 Score: 58.5362 bits (140), Expect = 9.999e-13
Identity = 26/63 (41.27%), Postives = 42/63 (66.67%), Query Frame = 0 
Query:    3 WKDIFLKSKKN-SYSRDWNYPVKQKFQQVVEVIEGAGTVSSEDEGFERALKDENILFVFIHDV 64
            WK++ L S+ + S  R W+YP+K+++  +++ IEG+G V S + GFE+ L D +  F FIHD 
Sbjct:   12 WKELTLSSEADQSKYRVWDYPIKEQYTHILKTIEGSGLVESAESGFEKVLADVDGNFAFIHDA 74
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BLAST of EMLSAG00000005265 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold1253_size52701-processed-gene-0.2 (protein:Tk01374 transcript:snap_masked-scaffold1253_size52701-processed-gene-0.2-mRNA-1 annotation:"ionotropic receptor 8a")

HSP 1 Score: 54.6842 bits (130), Expect = 7.665e-11
Identity = 23/62 (37.10%), Postives = 37/62 (59.68%), Query Frame = 0 
Query:    3 WKDIFLKSKKNSYS-RDWNYPVKQKFQQVVEVIEGAGTVSSEDEGFERALKDENILFVFIHD 63
            WK++ L S  N    R W+YP++++F  ++++I   G V +  EGF+  LKD    + FIHD
Sbjct:  628 WKELTLNSSGNPAKYRVWDYPIREQFTHILKIINDTGPVRTTQEGFDNVLKDHKGEYAFIHD 689
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BLAST of EMLSAG00000005265 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1253_size52701-snap-gene-0.11 (protein:Tk01375 transcript:maker-scaffold1253_size52701-snap-gene-0.11-mRNA-1 annotation:"glutamate receptor kainate 2")

HSP 1 Score: 48.1358 bits (113), Expect = 1.825e-8
Identity = 22/63 (34.92%), Postives = 37/63 (58.73%), Query Frame = 0 
Query:    3 WKDIFLKSKKN-SYSRDWNYPVKQKFQQVVEVIEGAGTVSSEDEGFERALKDENILFVFIHDV 64
            WK+I L S  + +  R W+YPV++++  +++VI     V + +EGF+R    +   F FIHD 
Sbjct:  145 WKEITLNSTSDQTRYRVWDYPVREQYTHILKVIRNNNPVETPEEGFQRVEDHQEGNFAFIHDA 207
The following BLAST results are available for this feature:
BLAST of EMLSAG00000005265 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 1
Match NameE-valueIdentityDescription
-6.485e-532.26symbol:Ir8a "Ionotropic receptor 8a" species:7227 ... [more]
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BLAST of EMLSAG00000005265 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 4
Match NameE-valueIdentityDescription
gi|592944490|gb|GAXK01014063.1|3.459e-1040.32TSA: Calanus finmarchicus comp9030_c0_seq1 transcr... [more]
gi|592957063|gb|GAXK01001493.1|3.867e-129.41TSA: Calanus finmarchicus comp3099830_c0_seq1 tran... [more]
gi|592814156|gb|GAXK01140412.1|3.345e+030.77TSA: Calanus finmarchicus comp817883_c1_seq1 trans... [more]
gi|592827282|gb|GAXK01129313.1|7.511e+032.73TSA: Calanus finmarchicus comp2307003_c0_seq1 tran... [more]
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BLAST of EMLSAG00000005265 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 11
Match NameE-valueIdentityDescription
EMLSAP000000052652.564e-49100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s2818:8763... [more]
EMLSAP000000048842.045e-3985.14pep:novel supercontig:LSalAtl2s:LSalAtl2s2576:7815... [more]
EMLSAP000000026892.373e-3692.19pep:novel supercontig:LSalAtl2s:LSalAtl2s1550:2664... [more]
EMLSAP000000033202.604e-3489.06pep:novel supercontig:LSalAtl2s:LSalAtl2s1826:739:... [more]
EMLSAP000000020102.050e-2763.53pep:novel supercontig:LSalAtl2s:LSalAtl2s135:60396... [more]
EMLSAP000000093412.154e-2476.27pep:novel supercontig:LSalAtl2s:LSalAtl2s5980:2505... [more]
EMLSAP000000077542.041e-2381.13pep:novel supercontig:LSalAtl2s:LSalAtl2s452:62141... [more]
EMLSAP000000048821.158e-2058.11pep:novel supercontig:LSalAtl2s:LSalAtl2s2572:7738... [more]
EMLSAP000000074048.400e-1656.92pep:novel supercontig:LSalAtl2s:LSalAtl2s4218:2116... [more]
EMLSAP000000012873.995e-1272.22pep:novel supercontig:LSalAtl2s:LSalAtl2s12140:100... [more]

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BLAST of EMLSAG00000005265 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000005265 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 5
Match NameE-valueIdentityDescription
XP_016772436.11.310e-835.48PREDICTED: glutamate receptor ionotropic, kainate ... [more]
XP_016772435.11.310e-835.48PREDICTED: glutamate receptor ionotropic, kainate ... [more]
XP_006561472.11.310e-835.48PREDICTED: glutamate receptor ionotropic, kainate ... [more]
EAA07123.46.369e-733.87AGAP010411-PA, partial [Anopheles gambiae str. PES... [more]
EEB19912.16.705e-733.33glutamate receptor, putative [Pediculus humanus co... [more]
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BLAST of EMLSAG00000005265 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25
Match NameE-valueIdentityDescription
gi|1000736154|ref|XP_015590562.1|3.599e-840.32PREDICTED: glutamate receptor ionotropic, kainate ... [more]
gi|645015117|ref|XP_008206325.1|4.648e-840.32PREDICTED: LOW QUALITY PROTEIN: uncharacterized pr... [more]
gi|478733528|gb|AGJ51189.1|8.245e-841.94olfactory ionotropic receptor IR8a [Panulirus argu... [more]
gi|817185504|ref|XP_012287203.1|8.767e-840.32PREDICTED: glutamate receptor ionotropic, kainate ... [more]
gi|1059875384|ref|XP_017792800.1|9.469e-838.71PREDICTED: ionotropic receptor 25a [Habropoda labo... [more]
gi|817185510|ref|XP_012287218.1|9.475e-840.32PREDICTED: glutamate receptor ionotropic, kainate ... [more]
gi|972186168|ref|XP_015174609.1|1.097e-739.68PREDICTED: glutamate receptor ionotropic, kainate ... [more]
gi|915659850|gb|KOC62738.1|1.151e-738.71Glutamate receptor, ionotropic kainate 2 [Habropod... [more]
gi|340727769|ref|XP_003402208.1|1.823e-737.50PREDICTED: glutamate receptor ionotropic, kainate ... [more]
gi|954558667|ref|XP_014603029.1|3.119e-738.10PREDICTED: uncharacterized protein LOC106786313 [P... [more]

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BLAST of EMLSAG00000005265 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 3
Match NameE-valueIdentityDescription
maker-scaffold802_size95064-snap-gene-0.169.999e-1341.27protein:Tk01705 transcript:maker-scaffold802_size9... [more]
snap_masked-scaffold1253_size52701-processed-gene-0.27.665e-1137.10protein:Tk01374 transcript:snap_masked-scaffold125... [more]
maker-scaffold1253_size52701-snap-gene-0.111.825e-834.92protein:Tk01375 transcript:maker-scaffold1253_size... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2818supercontigLSalAtl2s2818:8763..9087 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s2818-snap-gene-0.3
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000005265 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000005265EMLSAT00000005265-701112Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s2818:8763..9087-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000005265-688031 ID=EMLSAG00000005265-688031|Name=EMLSAG00000005265|organism=Lepeophtheirus salmonis|type=gene|length=325bp|location=Sequence derived from alignment at LSalAtl2s2818:8763..9087- (Lepeophtheirus salmonis)
ATGGCATGGAAGGACATTTTCTTGAAGAGTAAGAAAAATAGTTATTCACG
CGATTGGAACTATCCAGTGAAGCAAAAATTTCAACAAGTTGTAGAGGTAA
TAGAGGGAGCTGGTACAGTAAGTAGCGAGGATGAAGGATTTGAAAGGGCT
CTAAAGGATGAAAATATACTTTTTGTATTCATCCATGATGTGTAAGACGT
AAATATTCAACTTTCTCCCCCTCAATTGAATAATAATTGTCATTCTATCA
CCCACCCGATAGGTCCGTTATCAATTTTATTCAAATTGCAGTTACTCCTC
CATAAGTGAGACCTTTGGTGAATAA
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