EMLSAG00000005190, EMLSAG00000005190-687956 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000005190
Unique NameEMLSAG00000005190-687956
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
BLAST of EMLSAG00000005190 vs. L. salmonis peptides
Match: EMLSAP00000005190 (pep:novel supercontig:LSalAtl2s:LSalAtl2s273:488071:489570:-1 gene:EMLSAG00000005190 transcript:EMLSAT00000005190 description:"augustus-LSalAtl2s273-processed-gene-4.12")

HSP 1 Score: 718.768 bits (1854), Expect = 0.000e+0
Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 0
Query:    1 METKRLEIASLIHAGFDASDIVKQLGVSRHTIXRVRKRLEDGSSLKDRPRSGRPVKLTPEAAKHALEANPTMSMAEFAKKNSLHRSTVSKVVKAAARGKSKRKDHQPNINSRVCRKHFEPTDYKVERTDPSPHRKIPMNLTRRLLKNDAVPSIFEESPSIRIMNKSTPKSIRTSSSSDIRIMKLQNGKMPLVKTEVFYFKEEAFSSLLDIENTINISSLPPGSHLIIKEDSLLFCFIDDETIPQITQSLKIFDNLTFKLYHQNTIITQDKVKHICKSEKIESVCQIENLLAFVKSLEERDAIVAKSKLEKCIQILNTVECEDNHIKKRIDFIAQQLDLVVIPKKKPVFDFLKPVIK 356
            METKRLEIASLIHAGFDASDIVKQLGVSRHTIXRVRKRLEDGSSLKDRPRSGRPVKLTPEAAKHALEANPTMSMAEFAKKNSLHRSTVSKVVKAAARGKSKRKDHQPNINSRVCRKHFEPTDYKVERTDPSPHRKIPMNLTRRLLKNDAVPSIFEESPSIRIMNKSTPKSIRTSSSSDIRIMKLQNGKMPLVKTEVFYFKEEAFSSLLDIENTINISSLPPGSHLIIKEDSLLFCFIDDETIPQITQSLKIFDNLTFKLYHQNTIITQDKVKHICKSEKIESVCQIENLLAFVKSLEERDAIVAKSKLEKCIQILNTVECEDNHIKKRIDFIAQQLDLVVIPKKKPVFDFLKPVIK
Sbjct:    1 METKRLEIASLIHAGFDASDIVKQLGVSRHTIXRVRKRLEDGSSLKDRPRSGRPVKLTPEAAKHALEANPTMSMAEFAKKNSLHRSTVSKVVKAAARGKSKRKDHQPNINSRVCRKHFEPTDYKVERTDPSPHRKIPMNLTRRLLKNDAVPSIFEESPSIRIMNKSTPKSIRTSSSSDIRIMKLQNGKMPLVKTEVFYFKEEAFSSLLDIENTINISSLPPGSHLIIKEDSLLFCFIDDETIPQITQSLKIFDNLTFKLYHQNTIITQDKVKHICKSEKIESVCQIENLLAFVKSLEERDAIVAKSKLEKCIQILNTVECEDNHIKKRIDFIAQQLDLVVIPKKKPVFDFLKPVIK 356          
BLAST of EMLSAG00000005190 vs. L. salmonis peptides
Match: EMLSAP00000008076 (pep:novel supercontig:LSalAtl2s:LSalAtl2s47:287231:290661:-1 gene:EMLSAG00000008076 transcript:EMLSAT00000008076 description:"augustus-LSalAtl2s47-processed-gene-3.11")

HSP 1 Score: 241.506 bits (615), Expect = 8.049e-72
Identity = 135/247 (54.66%), Postives = 179/247 (72.47%), Query Frame = 0
Query:  102 RKDHQPNINSRVCRKHFEPTDYKVERTDPSPHRKIPMNLTRRLLKNDAVPSIFEESPSIRIMNKSTPKSIRTSSSSDIRIMKLQNGKMPLVKTEVFYFKEEAFSSLLDIENTINISSLPPGSHLIIKEDSLLFCFIDDETIPQITQSLKIFDNLTFKLYHQNTIITQDKVKHICKSEKIESVCQIENLLAFVKSLEERDAIVAKSKLEKCIQILNTVECEDNHIKKRIDFIAQQLDLVVIPKKKPVF 348
            RKD +PN +SR+C KHF+  DYK  RTD +P+RK P+ L RR LK DAVPSIF+  P+     + T ++  T+S S  R  K +N   P +K EV YF+E+   SLLDI+  I +S LP G+HLI ++D+LLFCFI+  TIPQI QSL+IFDNLTFKL +QNTIITQDK  HIC+SEKIE+V Q++NL+AF KSL     I AKSKLE+C  +L+T+E E+N+ +++IDFIA+QLDL+  P++   F
Sbjct:   45 RKDFEPNKHSRLCSKHFKQEDYKAIRTDSNPYRKKPVILIRRNLKIDAVPSIFDRVPAKHPETRQTRRT--TASVSPTRFKKEKN---PRLKAEVPYFEEKEILSLLDIKKKIKLSHLPSGTHLIKRKDNLLFCFIEG-TIPQIHQSLQIFDNLTFKLCNQNTIITQDKYNHICQSEKIETVSQVQNLIAFAKSLS--IDITAKSKLEQCTTVLSTIENEENNFQRKIDFIAEQLDLLSKPERTRQF 283          
BLAST of EMLSAG00000005190 vs. L. salmonis peptides
Match: EMLSAP00000004011 (pep:novel supercontig:LSalAtl2s:LSalAtl2s214:83119:84574:1 gene:EMLSAG00000004011 transcript:EMLSAT00000004011 description:"snap_masked-LSalAtl2s214-processed-gene-1.9")

HSP 1 Score: 90.5077 bits (223), Expect = 6.617e-21
Identity = 70/239 (29.29%), Postives = 119/239 (49.79%), Query Frame = 0
Query:  102 RKDHQPNINSRVCRKHFEPTDYKVERTD-PSPHRKIPMNLTRRLLKNDAVPSIFEESPSIRIMNKSTPKSIRTSSSSDIRIMKLQNGKMPLVKTEVFYFKEEAFSSLLDIENTINISSLPPGSHLIIKEDSLLFCFIDDETIPQITQSLKIFDNLTFKLYHQNTIITQDKVKHICKSEKIESVCQIENLLAFVKSLEERDAIVAKSKLEKCIQILNTVECEDNHIKKRIDFIAQQLDLV 339
            R +++P I+SR+C  HF   DY   R +      KI     R +LK DA+PS+F   P   +  K  PK    ++SS  R+ K +   M   +    +   +   S+ ++    +  ++P G   I + + ++F   D E   +I  SLK+ +NL  +LYHQ   I    V+HICK  KI +  Q+ +LL+++KSL     ++    + K +++L +V  +     + +DFI +QL L 
Sbjct:   45 RANYKPTIHSRLCSNHFVIEDYVSRRNEFDKTKNKIA---KRSILKADAIPSVFTGIPKSCL--KRIPKPRSNNASSSARLNKQRKKSMEDYQK---FLDSDRVDSIRELLEKFDRRNIPSGIDEISRNNEMMFLSFDWEN-QEIRFSLKVQENLKIQLYHQTMQIPLSDVRHICKESKITATSQVGSLLSYLKSLTCSKKLI----INKAVELLESVVLDQVSEVRHVDFIIEQLKLA 270          
BLAST of EMLSAG00000005190 vs. L. salmonis peptides
Match: EMLSAP00000008919 (pep:novel supercontig:LSalAtl2s:LSalAtl2s554:629677:631607:1 gene:EMLSAG00000008919 transcript:EMLSAT00000008919 description:"augustus-LSalAtl2s554-processed-gene-6.3")

HSP 1 Score: 67.0106 bits (162), Expect = 6.351e-13
Identity = 66/217 (30.41%), Postives = 107/217 (49.31%), Query Frame = 0
Query:  110 NSRVCRKHFEPTDYKVER-TDPSPHRKIPMNLTRRLLKNDAVPSIFEESPSIRIMNKSTPKSIRTSSSSDIRIMKLQNGKMPLVKTEVFYFKEEAFSSLLDIENTINISSLPPGSHLIIKEDSLLFCFIDDETI--PQITQSLKIFDNLTFKLYHQNTIITQDKVKHICKSEKIESVCQIENLLAFVKSLE---ERDAI-VAKSKLEKCIQILNTVE 319
            N+ VC  HF   DY+ +  T+  P       L  RLLK DA+PS F   P     +K  P   R + +++ R  K +N K+  +  E+     +   +L D++  I   ++P  +  I ++ SL +  ID  ++  P I  SL I  NLTF++Y +  ++    V HI  S+KI +  ++  +LA +K LE     D I   K ++E  + IL+ VE
Sbjct:   62 NAVVCSLHFTNNDYRHQSLTNDQP-------LKLRLLKKDAIPSQF---PGPSYFSKK-PIKCRKTKATNRR--KSENQKINHMNQELI--NSDKVYTLDDLKEKIKKYTIPSNALFISEDTSLTYFLIDKPSLGPPTIVFSLVIDSNLTFEMYQEKKLLPLSVVSHIVPSKKIHTCSEVLKILATLKGLETNSNHDPIKYIKKQVEAILNILSEVE 263          
BLAST of EMLSAG00000005190 vs. L. salmonis peptides
Match: EMLSAP00000009597 (pep:novel supercontig:LSalAtl2s:LSalAtl2s617:147807:148969:-1 gene:EMLSAG00000009597 transcript:EMLSAT00000009597 description:"maker-LSalAtl2s617-augustus-gene-1.41")

HSP 1 Score: 66.6254 bits (161), Expect = 2.061e-12
Identity = 73/291 (25.09%), Postives = 136/291 (46.74%), Query Frame = 0
Query:   62 AKHALEANPTMSMAEFAKKNSLHRSTVSKVVKAAARGKSKRKDHQPNINSRVCRKHFEPTDYKVERTDPSPHRKIPMNL-TRRLLKNDAVPSIFEESPSIRIMNKSTPKSIRTSSSSDIRIMKLQNGKMPLVKTEVFYFKEEAFSSLLDIENTINISSLPPGSHLIIKEDSLLFCFIDDETIP--QITQSLKIFDNLTFKLYHQNTIITQDKVKHICKSEKIESVCQIENLLAFVKS----LEERDAIVAKSKLEKCIQILNTVECEDNHIKKRIDFIAQQLDLVVIPKKK 345
            + + L+ N T S  E  +  S HR    ++++        RK++ P+ +S +C KHF+  D++ +    +P      N+     LK  +VPS F   P    M   +     TSS+   R ++  N      + + FY ++    SL D+E  +  ++LP    +I +E  L    I        +++ SL+I ++L+F        + +++  HI K+   E + ++ NL+AF+KS    +E++  ++ K+    C  I + +       KK + F+ +QL L VIP K+
Sbjct:   12 SGYNLKKNETHS--EVKEDISFHRFPKDQILREKWIRNLSRKNYTPSSHSVLCSKHFDVQDFEQQYLYQNPKELNSKNIKCSNKLKQGSVPSKFPNLPKETKMLTPSRSERATSSARHQRQLERLN-----TQAKEFY-QKNNIQSLDDLEKKLGKATLPSQVSMIKQEGKLYLITIGMSKFGTQELSFSLEINEDLSFTACVNGFKLKKNRFGHILKTNTFEHLFEVINLVAFLKSTDCDVEDKSKVLGKA----CKIIESVIPDFKEKEKKSLSFLNEQLSLCVIPYKQ 290          
BLAST of EMLSAG00000005190 vs. L. salmonis peptides
Match: EMLSAP00000004433 (pep:novel supercontig:LSalAtl2s:LSalAtl2s231:31211:32835:1 gene:EMLSAG00000004433 transcript:EMLSAT00000004433 description:"maker-LSalAtl2s231-augustus-gene-0.29")

HSP 1 Score: 62.7734 bits (151), Expect = 3.203e-11
Identity = 64/243 (26.34%), Postives = 107/243 (44.03%), Query Frame = 0
Query:  102 RKDHQPNINSRVCRKHFEPTDYKVERTDPSPHRKIPMNLTRRLLKN----DAVPSIFEESPSIRIMNKSTPKSIRTSSSSDIRIMKLQNGKMPLVKTEVFYFKEEAFSSLLDIENTINISSLPPGSHLIIKEDSLLFCFIDDETIPQITQSLKIFDNLTFKLYHQNTIITQDKVKHICKS-EKIESVCQIENLLAFVKSLEERDAIVAKSKLEKCIQILNTVECEDNHIKKRIDFIAQQLDLV 339
            +K+ +PN +SR+C  HF   DY            I  +  R LLK     D    +F +  ++  M  S P  +    +             P +K ++   K+  F  LL   N I    LP G H   K ++L     + E +P+I  +L I  +L+++L+    +++ +KV  I K    +  V  IEN+L ++    E D    ++ +EKCI IL   +  +    + I FI +QL L+
Sbjct:   44 KKNFKPNRSSRLCGLHFRTKDY------------IQADWDRDLLKKRKDADVSCKLFLKPEAVPFMETSEPGKLADCGT---------QTSPPEIKHDLTVIKD--FDDLLTKSNFIQ---LPEGFHKFTKSETLHIALFE-ENVPKIKNTLIIKKDLSYELWDGTILLSNEKVSDIVKDISLVTCVLDIENILLYLSISSECDT--EENMVEKCINILEAQDYTEESDARLILFIVEQLKLL 257          
BLAST of EMLSAG00000005190 vs. L. salmonis peptides
Match: EMLSAP00000002611 (pep:novel supercontig:LSalAtl2s:LSalAtl2s151:424347:426407:1 gene:EMLSAG00000002611 transcript:EMLSAT00000002611 description:"augustus-LSalAtl2s151-processed-gene-4.1")

HSP 1 Score: 63.1586 bits (152), Expect = 3.216e-11
Identity = 79/278 (28.42%), Postives = 127/278 (45.68%), Query Frame = 0
Query:   82 SLHRSTVSKVVKAA---ARGKSKRKDHQPNINSRVCRKHFEPTDYKVERTD-PSPHRKIPMN---LTRRLLKNDAVPSIFEESPSIRIMNKSTPKSIRTSSSSDIRIMKLQNGKMPLVKTEVFYFKEEAFSSLLDIENTINISSLPPGSHLIIKEDSLLFCFIDD--ETIPQITQSLKIFDNLTFKLYHQNTIITQDKVKHICKSEKIESVCQIENLLAFVKSL---EERDAIV-AKSKLEKCIQILNTVECEDNHIKKRIDFIAQQLDLV-VIPKKK 345
            SLH   + K  K A   A  +       P+  SRVC  HF   D+  E  D    +R   +    L +R LK  AVPSIF   P      KS   + R +SS+  RI K       +V+ +   F +++     D+         P   H    EDS+ F  + +      +I  S+ I  +LTF LY++N  + +  V  +  + KI SV  ++N+L+ +KS+     +D I    + +E  ++ L   +  D+H +K++ FI +QL L+   PK+K
Sbjct:  161 SLHSFPLDKSSKGAWLRAIPRDSNGTWAPSKYSRVCSLHFHEDDFVYESADHKRKYRSYGVGDNKLQKRYLKPGAVPSIFPNLPKYLSPVKSQRPTSRATSSA--RISKENED---IVEAQQSLFLKDSVIDFSDLCLKCGDEKFPTNVHWRRTEDSIQFYCLSELCSDFVEIEFSVMINRDLTFNLYYKNVNLDRSCVNPLTTNRKITSVSLLQNILSHMKSIPFPPMKDMINHLXNXVESIVENLXPSDI-DSHKRKKLIFIREQLALINSTPKQK 432          
BLAST of EMLSAG00000005190 vs. L. salmonis peptides
Match: EMLSAP00000011633 (pep:novel supercontig:LSalAtl2s:LSalAtl2s806:113709:119311:1 gene:EMLSAG00000011633 transcript:EMLSAT00000011633 description:"maker-LSalAtl2s806-augustus-gene-0.29")

HSP 1 Score: 61.6178 bits (148), Expect = 1.222e-10
Identity = 57/242 (23.55%), Postives = 107/242 (44.21%), Query Frame = 0
Query:   82 SLHRSTVSKVVKAAARGKSKRKDHQPNINSRVCRKHFEPTDYKVERTDPSPHRKIPMNLTRRLLKNDAVPSIFEESPSIRIMNKSTPKSIRTSSSSDIRIMKLQNGKMPLVKTEVFYFKEEAFSSLLDIENTINISSLP--------PGSHLIIKEDSLLFCFIDDETIPQITQSLKIFDNLTFKLYHQNTIITQDKVKHICKSEKIESVCQIENLLAFVKSLEERDAIVAKSKLEKCIQIL 315
            SLH     KV++   R       H+P  ++ VC  HF  +DY       + +++   +L +  LK  A PS+F E     +++        +    D  +   QN    +             +SL D+++ +++  L          G+     + + +    D   +P +  SLKI  NL ++++     + + KVKHI +S++I S  Q+  LL F+KS    +AI+ K K+++ + +L
Sbjct:   30 SLHLFPRDKVLRERWRQSIPFYKHKPGDHTYVCSLHFLKSDYG----GFTSNQEEASDLKKITLKKGAKPSVFPE-----LLDLQARLDEVSQLDDDFYVRDFQNDDEGMYSAVTAKKSLPTINSLQDLQDNLDLKLLSLDIVHTYHEGTSYSAADWTFMMVTQDHNNVPTLKFSLKIGANLEYEIWCHQIRVHKCKVKHILESDRINSAMQVIQLLEFLKSYSMSEAII-KDKVDQALYLL 261          
BLAST of EMLSAG00000005190 vs. L. salmonis peptides
Match: EMLSAP00000002814 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1623:31398:32936:1 gene:EMLSAG00000002814 transcript:EMLSAT00000002814 description:"augustus-LSalAtl2s1623-processed-gene-0.5")

HSP 1 Score: 58.9214 bits (141), Expect = 4.403e-10
Identity = 67/304 (22.04%), Postives = 128/304 (42.11%), Query Frame = 0
Query:   50 RSG-RPVKLTPEAAKHALEANPTMSMAEFAKKNSLHRSTVSKVVKAAARGKSKRKDHQPNINSRVCRKHFEPTDYKVERTDPSPHRKIPMNLTRRLLKNDAVPSIFEESP--------SIRIMNKSTPKSIRTSSSSDIRIMKLQNGKMPL----VKTEVFYFKEEAFSSLLDIENTINISSLPPGSHLIIKEDSLLFCFIDDETIPQITQSLKIFDNLTFKLYHQNTIITQDKVKHICKSEKIESVCQIENLLAFVKSLEERDAIVAKSKLEKCIQILNTVECEDNHIKKRIDFIAQQLDLVV 340
            RSG +P+K   E   + +  N  +    F K  +L +  +  +          RK+ +P   S +C  HF+ +D + E  D +  R+   NL R++LK DA+P+ F   P         +R  N  +P  +       I  +   +  + L     K +   + E+ F     ++  +         H I   DS  F          I  SLK+  +++ +++ +N      ++KHI ++  IE    + N+LA++ SL   D +   +K +K       ++ E N    R+DF+  +++ ++
Sbjct:   11 RSGYKPLK--SENNTNVIAFNKKIGYHMFPKDEALRKKWIQAI---------PRKNWEPTKYSAICALHFDSSDLRTEPQDSNKFRRNKPNLIRKVLKKDAIPTKFPSVPFHNPRRRTVVRSENDLSPCRLSIDHEKSINTLDTVDAVLTLDELNSKLDRGLYPEKIFDKFNKVKKELLF-------HSICDTDSHGF---------TILFSLKVNSDMSIQIWLKNEEFPFYRLKHIIRNNCIEKCSVLLNILAYMNSLTNSDYVYNDTKDKK-----RDIKDELNECFSRLDFLLPEIEDII 282          
BLAST of EMLSAG00000005190 vs. L. salmonis peptides
Match: EMLSAP00000004050 (pep:novel supercontig:LSalAtl2s:LSalAtl2s215:953600:954064:-1 gene:EMLSAG00000004050 transcript:EMLSAT00000004050 description:"snap-LSalAtl2s215-processed-gene-9.16")

HSP 1 Score: 50.447 bits (119), Expect = 6.158e-8
Identity = 25/59 (42.37%), Postives = 39/59 (66.10%), Query Frame = 0
Query:  102 RKDHQPNINSRVCRKHFEPTDYKVERTDPSPHRKIPMNLTRRLLKNDAVPSIFEESPSI 160
            R++  P  N+RVC +HF  + Y  ER D + +RK  +NL R  L+++AVP+IF +SP+ 
Sbjct:   53 RENFVPTKNARVCSRHFHESCYSTERRDSNTYRKH-LNLKRERLQSNAVPTIFPDSPAY 110          
BLAST of EMLSAG00000005190 vs. nr
Match: gi|225718892|gb|ACO15292.1| (THAP domain-containing protein 4 [Caligus clemensi])

HSP 1 Score: 74.3294 bits (181), Expect = 1.238e-11
Identity = 68/240 (28.33%), Postives = 108/240 (45.00%), Query Frame = 0
Query:   60 EAAKHALEANPTMSMAEFAKKNSLHRSTVSKVVKAAARGKSKRKDHQPNINSRVCRKHFEPTDYKVERTDPSPHRKIPMN-LTRRLLKNDAVPSIFEESPSIRIMNKSTPKSIRTSSSSDIRIMKLQNGKMPLVKTEVFYFKEEAFSSLLDIENTINISSLPPG--SHLIIKEDSLLFCFIDDETIPQITQSLKIFDNLTFKLYHQNTIITQDKVKHICKSEKIESVCQIENLLAFVKSL 296
            +A K   +  P +S   F + ++L +  +  +          RKD+ PN NSR+C  HF   D+++ R D +  R      L R +L  DAVP+ F  SP +  +     K   ++ SS+ R     + K    +T+VF        SL +I+  ++  ++P G  +H   K+ + L    D+   P +  SL I D L F  Y     +   K KHI KS K  +V  I  +LA +K  
Sbjct:   15 DAVKPGRDDTPRISYHSFPRDDNLRQLWIKAIC---------RKDYVPNQNSRICSLHFREKDFRIGRIDSNNTRSSQRGSLQRMILNKDAVPTQFHASPKLSFIKLRFKKRATSNKSSEAR-----HTKQLKEETQVFE-PSNQLKSLSEIQEKMS-DAIPSGFITHSTDKKFAFLCMTYDELKGPDVKLSLVINDTLKFSAYINQKRLPASKFKHIVKSNKAVTVDSILRILASMKGF 238          
BLAST of EMLSAG00000005190 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold1099_size62903-processed-gene-0.6 (protein:Tk01128 transcript:snap_masked-scaffold1099_size62903-processed-gene-0.6-mRNA-1 annotation:"kinesin-like protein kif3a isoform x2")

HSP 1 Score: 92.0485 bits (227), Expect = 1.585e-20
Identity = 53/112 (47.32%), Postives = 70/112 (62.50%), Query Frame = 0
Query:    1 METKRLEIASLIHAGFDASDIVKQLGVSRHTIXRVRKRLEDGSSLKDRPRSGRPVKLTPEAAKHALEANPTMSMAEFAKKNSLHRSTVSKVVKAAARGKSKRKDHQPNINSR 112
            ME KR E+A LI AG  +S  +  L  S  T+  VRKR++DG  L D+PRSGRPVKL PEA +    ANP M+M   AK  ++ ++TVS+ VK A  GKS R   +P ++ R
Sbjct:    1 MEVKRREVAILIRAGH-SSGYIANL-ASLKTVYNVRKRIKDGQDLGDKPRSGRPVKLWPEAGQAVFTANPRMTMTSLAKNTNVSKATVSRAVKKAG-GKSLRLVERPLLSQR 109          
BLAST of EMLSAG00000005190 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold191_size271209-snap-gene-0.9 (protein:Tk06176 transcript:maker-scaffold191_size271209-snap-gene-0.9-mRNA-1 annotation:"39s ribosomal protein mitochondrial")

HSP 1 Score: 72.4034 bits (176), Expect = 1.679e-14
Identity = 40/96 (41.67%), Postives = 56/96 (58.33%), Query Frame = 0
Query:    1 METKRLEIASLIHAGFDASDIVKQLGVSRHTIXRVRKRLEDGSSLKDRPRSGRPVKLTPEAAKHALEANPTMSMAEFAKKNSLHRSTVSKVVKAAA 96
            M TKR +I  L+ AG    +I   +G +  T+ RVR  +E G SL+ +P SGRP KL     K+  +ANP +S+   AK N + RST+S+ VK A 
Sbjct:    1 MSTKRAQIEILVRAGKGTVEIANLVGCAHTTVRRVRSIVEAGESLERKPGSGRPAKLDVVEVKNMFKANPMVSITSVAKANDVSRSTMSRAVKKAG 96          
BLAST of EMLSAG00000005190 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold348_size200312-snap-gene-0.28 (protein:Tk10904 transcript:maker-scaffold348_size200312-snap-gene-0.28-mRNA-1 annotation:"glycoprotein-n-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform x3")

HSP 1 Score: 50.8322 bits (120), Expect = 3.264e-7
Identity = 32/96 (33.33%), Postives = 52/96 (54.17%), Query Frame = 0
Query:    2 ETKRLEIASLIHAGFDASDIVKQLGVSRHTIXRVRKRLEDGSSLKDRP----RSGRPVKLTPEAAKHALEANPTMSMAEFAKKNSLHRSTVSKVVK 93
            E +R  IA L  AG DA+ IVK     + T+  V KRL+DG  ++ +P    ++ +  K      K +++ANP +S+   A +  L R T++K +K
Sbjct:  438 ELRRKVIADLHAAGNDAATIVKVTNYPKRTVYDVVKRLKDGRGIEHKPCGPHKAKKRTKTFLAGLKRSIKANPAVSIRAHAARRGLSRKTMAKAIK 533          
BLAST of EMLSAG00000005190 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1340_size46339-snap-gene-0.12 (protein:Tk01994 transcript:maker-scaffold1340_size46339-snap-gene-0.12-mRNA-1 annotation:"protein fan")

HSP 1 Score: 50.0618 bits (118), Expect = 7.577e-7
Identity = 29/97 (29.90%), Postives = 54/97 (55.67%), Query Frame = 0
Query:    1 METKRLEIASLIHAGFDASDIVKQLGVSRHTIXRVRKRLEDGSSLKDRPRSGRPVKLTPEAAKHALEA----NPTMSMAEFAKKNSLHRSTVSKVVK 93
            M+ KR EIA+L+ AG+   +I+  L VS+  +   +KRL+     +     GRP  +  +A + A++A    NP  S+ + A+ +++ R T+  +V+
Sbjct:  950 MDEKRQEIATLLRAGYSQVNIMTTLNVSKTMVYNAKKRLDASGDARRYHGGGRPRSVRTKALETAVKAKGRRNPRRSVRKLARDHNVSRKTMRSIVE 1046          
The following BLAST results are available for this feature:
BLAST of EMLSAG00000005190 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000005190 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000005190 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 12
Match NameE-valueIdentityDescription
EMLSAP000000051900.000e+0100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s273:48807... [more]
EMLSAP000000080768.049e-7254.66pep:novel supercontig:LSalAtl2s:LSalAtl2s47:287231... [more]
EMLSAP000000040116.617e-2129.29pep:novel supercontig:LSalAtl2s:LSalAtl2s214:83119... [more]
EMLSAP000000089196.351e-1330.41pep:novel supercontig:LSalAtl2s:LSalAtl2s554:62967... [more]
EMLSAP000000095972.061e-1225.09pep:novel supercontig:LSalAtl2s:LSalAtl2s617:14780... [more]
EMLSAP000000044333.203e-1126.34pep:novel supercontig:LSalAtl2s:LSalAtl2s231:31211... [more]
EMLSAP000000026113.216e-1128.42pep:novel supercontig:LSalAtl2s:LSalAtl2s151:42434... [more]
EMLSAP000000116331.222e-1023.55pep:novel supercontig:LSalAtl2s:LSalAtl2s806:11370... [more]
EMLSAP000000028144.403e-1022.04pep:novel supercontig:LSalAtl2s:LSalAtl2s1623:3139... [more]
EMLSAP000000040506.158e-842.37pep:novel supercontig:LSalAtl2s:LSalAtl2s215:95360... [more]

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BLAST of EMLSAG00000005190 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000005190 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000005190 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 1
Match NameE-valueIdentityDescription
gi|225718892|gb|ACO15292.1|1.238e-1128.33THAP domain-containing protein 4 [Caligus clemensi... [more]
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BLAST of EMLSAG00000005190 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 4
Match NameE-valueIdentityDescription
snap_masked-scaffold1099_size62903-processed-gene-0.61.585e-2047.32protein:Tk01128 transcript:snap_masked-scaffold109... [more]
maker-scaffold191_size271209-snap-gene-0.91.679e-1441.67protein:Tk06176 transcript:maker-scaffold191_size2... [more]
maker-scaffold348_size200312-snap-gene-0.283.264e-733.33protein:Tk10904 transcript:maker-scaffold348_size2... [more]
maker-scaffold1340_size46339-snap-gene-0.127.577e-729.90protein:Tk01994 transcript:maker-scaffold1340_size... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s273supercontigLSalAtl2s273:488071..489570 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionaugustus-LSalAtl2s273-processed-gene-4.12
Biotypeprotein_coding
EvidenceIEA
NoteTHAP domain-containing protein 4 [Caligus clemensi]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000005190 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000005190EMLSAT00000005190-701037Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s273:488071..489570-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000005190-687956 ID=EMLSAG00000005190-687956|Name=EMLSAG00000005190|organism=Lepeophtheirus salmonis|type=gene|length=1500bp|location=Sequence derived from alignment at LSalAtl2s273:488071..489570- (Lepeophtheirus salmonis)
ATGGAAACAAAAAGGTTGGAGATTGCATCTTTGATCCACGCCGGCTTTGA CGCCTCTGACATCGTCAAGCAGCTCGGGGTCAGTCGGCACACCATCTMCC GCGTGCGCAAGCGCCTGGAAGATGGGTCCAGCCTCAAAGATCGTCCTCGA AGCGGTAGGCCAGTCAAGCTAACCCCAGAAGCTGCTAAACACGCTTTAGA GGCCAACCCGACCATGTCCATGGCCGAATTTGCAAAAAAGAACTCTCTAC ATCGGTCAACTGTATCAAAGGTGGTGAAGGCTGCTGCTAGGGGAAAGTCA AAGAGGTTTGAATATATTTCACGTATTAGGCTAACTTAAGTCAAGGAGTA CGTATAAATAACGTACTCCTTCCTTAAATAACGAATAAGTTTCATACTAT TTGTAAAAATGATTCCATCGTCGTTCTATATAGTGTTAAGTGTGATGACT ATTTTGTATTTCAATAATATTTGTTATCAAATTATAAGCCTATAAATTAT GAAACGAATTTATTAAATGTATAATTTTTTTAACCGAAATACATTATATA TAGACCAAAAGACTAATTAATATTTACTGATATGGACTATTTTTCTAGGA AAGATCACCAACCGAATATAAATTCAAGAGTCTGTAGAAAGCATTTCGAA CCAACTGACTATAAAGTAGAACGAACAGACCCAAGCCCTCATAGAAAAAT ACCAATGAATCTCACTCGCCGTCTTTTAAAAAACGATGCAGTTCCATCTA TTTTTGAAGAATCTCCTAGCATACGAATTATGAATAAATCCACTCCTAAA AGTATAAGAACTAGTTCTAGTTCAGATATTAGGTAAATATATAGTACGCT GGATTTATTTGTTGAGTTAATGGTATAACTCAAAAATCTTCCTCATTAAT TTGTTCAGAATAATGAAGTAAATTACCATAGTCTTTTTTAAACCCTGCTA ATATTGTTTCCATTATTTTTTTTACAGATTACAAAATGGAAAGATGCCTT TAGTAAAAACAGAAGTTTTTTATTTTAAAGAAGAGGCATTCTCATCTCTA TTAGATATAGAAAACACTATAAATATCAGTTCTTTGCCCCCTGGTTCCCA TCTAATAATAAAGGAAGACAGTCTGCTTTTTTGCTTCATTGATGATGAAA CAATTCCACAAATTACTCAATCTCTTAAAATATTTGACAATTTAACTTTT AAATTATATCACCAGAACACAATCATCACTCAAGACAAAGTTAAACATAT ATGTAAGTCTGAGAAAATTGAATCTGTTTGTCAGATTGAAAACTTATTAG CTTTTGTCAAATCTCTCGAAGAGAGAGATGCCATTGTGGCAAAATCAAAG CTTGAAAAGTGTATACAAATTCTAAATACCGTTGAATGTGAGGATAATCA TATTAAAAAAAGAATAGACTTTATTGCTCAACAGTTGGACCTCGTAGTAA TACCAAAAAAGAAACCTGTGTTCGATTTCTTGAAACCAGTAATAAAGTAA
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