EMLSAG00000008156, EMLSAG00000008156-690922 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000008156
Unique NameEMLSAG00000008156-690922
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000008156 vs. C. finmarchicus
Match: gi|592862260|gb|GAXK01095302.1| (TSA: Calanus finmarchicus comp1395496_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 41.5874 bits (96), Expect = 4.230e-4
Identity = 27/73 (36.99%), Postives = 34/73 (46.58%), Query Frame = 0 
Query:   81 DRFIRVNWNNIISSISRYYQFARARKSGESIA----RCNFSKL---TPYSNCYNGMTSTTLGLSYDYRSVMQY 146
            D FI + W+NI++      QF R    G   A     C+ +     T YS CY+G T    G  YDY SVM Y
Sbjct:  686 DSFITMVWSNIVADGGG--QFFRDAWEGTDPATLPAECDDTNAVDGTDYSTCYSGWTVDACGFGYDYTSVMHY 898
[Close]
BLAST of EMLSAG00000008156 vs. C. finmarchicus
Match: gi|592895097|gb|GAXK01063278.1| (TSA: Calanus finmarchicus comp809664_c3_seq1 transcribed RNA sequence)

HSP 1 Score: 40.817 bits (94), Expect = 6.977e-4
Identity = 24/76 (31.58%), Postives = 41/76 (53.95%), Query Frame = 0 
Query:   81 DRFIRVNWNNIISS-ISRYYQFARARKSGESIARCNFSKLTP-----YSNCYNGMTSTTLGLSYDYRSVMQYSRTA 150
            D++++++W+NI     S  ++     + G     C    LT      +S+CY+G   T+ G SYD++S+M YS TA
Sbjct:  654 DQYVQLHWDNIKGVYASNMWRDEWDSEQGVQ-EECRDGGLTENMWRNFSSCYSGNKVTSYGFSYDFQSIMHYSMTA 878

HSP 2 Score: 35.039 bits (79), Expect = 6.946e-2
Identity = 16/38 (42.11%), Postives = 21/38 (55.26%), Query Frame = 0 
Query:   49 WPKKQVPYTFGPSFTSKEKSLIRKAMKKIQSGD--RFI 84
            WP   VPYT    FTS ++++I +AM  I      RFI
Sbjct:  345 WPNALVPYTIDADFTSDDRTVIAQAMAHIMENSCVRFI 458
[Close]
BLAST of EMLSAG00000008156 vs. C. finmarchicus
Match: gi|592909094|gb|GAXK01049281.1| (TSA: Calanus finmarchicus comp6411935_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 40.4318 bits (93), Expect = 8.408e-4
Identity = 21/45 (46.67%), Postives = 27/45 (60.00%), Query Frame = 0 
Query:   41 FVFGSNNLWPKKQVPY---TFG--PSFTSKEKSLIRKAMKKIQSG 80
            F+  S+ LWP   VPY   TFG  P F  ++K+LIR AM+ I  G
Sbjct:  477 FLLDSSKLWPNGIVPYVFETFGNEPLFKDEDKNLIRSAMRHISHG 611
[Close]
BLAST of EMLSAG00000008156 vs. C. finmarchicus
Match: gi|592860042|gb|GAXK01097520.1| (TSA: Calanus finmarchicus comp38151_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 38.891 bits (89), Expect = 3.704e-3
Identity = 27/72 (37.50%), Postives = 37/72 (51.39%), Query Frame = 0 
Query:   81 DRFIRVNWNNIISS-ISRYYQFARARKSGESIARCNFSKLT-PYSNCYNGMTSTTLGLSYDYRSVMQYSRTA 150
            D +I ++W+NI S   S+YY+       G ++   N  K T  Y NC +    T   L YDY S+M YS TA
Sbjct: 1354 DDYITIDWSNIQSGGPSQYYKDTWV---GGAVP-TNICKTTLDYVNCRSTFFVTACDLPYDYTSIMHYSTTA 1557

HSP 2 Score: 31.9574 bits (71), Expect = 7.859e-1
Identity = 13/52 (25.00%), Postives = 27/52 (51.92%), Query Frame = 0 
Query:   38 SRNFVFGSNNLWPKKQVPYTFGPSFTSKEKSLIRKAMKKIQSGD--RFIRVN 87
            ++N +    N W    +PYT   +FT+ E+++I + +  ++     RF+  N
Sbjct: 1744 TKNGIAALENHWANGIIPYTLDAAFTTSERAVIAQGIAHVEENSCLRFVERN 1899
[Close]
BLAST of EMLSAG00000008156 vs. C. finmarchicus
Match: gi|592940370|gb|GAXK01018183.1| (TSA: Calanus finmarchicus comp32024_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 37.3502 bits (85), Expect = 1.110e-2
Identity = 23/68 (33.82%), Postives = 34/68 (50.00%), Query Frame = 0 
Query:   81 DRFIRVNWNNI-ISSISRYYQFARARKSGESIARCNFSKLTPYSNCYNGMTSTTLGLSYDYRSVMQYS 147
            D FI ++W+NI     S+YY+       G +I      +   Y+NC +   +T   L YDY S+M YS
Sbjct:  654 DDFITIDWSNIEDGGPSQYYKDTWV---GGAIPTNICKETLDYANCRSTFFTTACDLPYDYVSIMHYS 848

HSP 2 Score: 33.8834 bits (76), Expect = 1.854e-1
Identity = 15/52 (28.85%), Postives = 28/52 (53.85%), Query Frame = 0 
Query:   38 SRNFVFGSNNLWPKKQVPYTFGPSFTSKEKSLIRKAMKKIQSGD--RFIRVN 87
            ++N +   +N W    VPYT   +FTS E+++I + +  ++     RF+  N
Sbjct:  312 TKNGIAALDNHWGSGLVPYTIDAAFTSSERAVIAQGITHVEENSCLRFVERN 467
[Close]
BLAST of EMLSAG00000008156 vs. C. finmarchicus
Match: gi|592772341|gb|GAXK01182227.1| (TSA: Calanus finmarchicus comp2584565_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 36.965 bits (84), Expect = 1.437e-2
Identity = 28/123 (22.76%), Postives = 51/123 (41.46%), Query Frame = 0 
Query:   24 CKMVLDNHNRAEMMSRNFVFGSNNLWPKKQVPYTFGPSFTSKEKSLIRKAMKKI--QSGDRFIRVNWNNIISSISRYYQFARARKSGESIARCNFSKLTPYSNCYNGMTSTTLGLSYDYRSVM 144
            C    +  +  E+       G++N WP K+VPY    S T+ ++ +  KA+ +I   +  RF   +        S++ +  R    GE+              C++G  +  LG S + R V+
Sbjct:  386 CHTDYEMESNTEVKGTRGADGTSNKWPNKEVPYVLDGSLTTSDREVFAKAICEITMHTCVRFKARDGE------SKFLKVERVCDCGETGG-----------GCFSGAYTNGLGASTNRRLVI 703
[Close]
BLAST of EMLSAG00000008156 vs. C. finmarchicus
Match: gi|592762271|gb|GAXK01192142.1| (TSA: Calanus finmarchicus comp41795_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 36.5798 bits (83), Expect = 1.852e-2
Identity = 14/34 (41.18%), Postives = 19/34 (55.88%), Query Frame = 0 
Query:  107 SGESIARCNFSKLTPYSNCYNGMTSTTLGLSYDY 140
            +G+   RC   KL    +C   MTST +GL YD+
Sbjct: 1295 TGDDKVRCELVKLCKLEHCLQSMTSTKVGLGYDF 1396
[Close]
BLAST of EMLSAG00000008156 vs. C. finmarchicus
Match: gi|592762272|gb|GAXK01192141.1| (TSA: Calanus finmarchicus comp41795_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 36.5798 bits (83), Expect = 1.854e-2
Identity = 14/34 (41.18%), Postives = 19/34 (55.88%), Query Frame = 0 
Query:  107 SGESIARCNFSKLTPYSNCYNGMTSTTLGLSYDY 140
            +G+   RC   KL    +C   MTST +GL YD+
Sbjct: 1295 TGDDKVRCELVKLCKLEHCLQSMTSTKVGLGYDF 1396
[Close]
BLAST of EMLSAG00000008156 vs. C. finmarchicus
Match: gi|592954695|gb|GAXK01003858.1| (TSA: Calanus finmarchicus comp2093481_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 35.4242 bits (80), Expect = 4.017e-2
Identity = 14/31 (45.16%), Postives = 19/31 (61.29%), Query Frame = 0 
Query:   49 WPKKQVPYTFGPSFTSKEKSLIRKAMKKIQS 79
            WP   VPY F PSFTS ++     A K+I++
Sbjct:  743 WPGNNVPYYFRPSFTSTDRKTFEAATKQIEA 835
[Close]
BLAST of EMLSAG00000008156 vs. C. finmarchicus
Match: gi|592957439|gb|GAXK01001117.1| (TSA: Calanus finmarchicus comp1762764_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 35.8094 bits (81), Expect = 4.061e-2
Identity = 22/73 (30.14%), Postives = 34/73 (46.58%), Query Frame = 0 
Query:   81 DRFIRVNWNNIISSISRYYQFARARKSGESIAR---CNFSKL----TPYSNCYNGMTSTTLGLSYDYRSVMQY 146
            D  + VNW N+   + + +   R   S E I     CN + +    + +S C +G   T  G+ YD+ SVM Y
Sbjct:  787 DTMVTVNWANV--EVEKAHNLFRDSFSTEDITLVPICNNTGVLQADSDFSGCVSGDVVTAYGVGYDFYSVMHY 999

HSP 2 Score: 31.9574 bits (71), Expect = 7.357e-1
Identity = 13/30 (43.33%), Postives = 18/30 (60.00%), Query Frame = 0 
Query:   49 WPKKQVPYTFGPSFTSKEKSLIRKAMKKIQ 78
            WP  +VPY     F S EK+LI  A++ I+
Sbjct: 1240 WPNGEVPYVVENVFDSDEKALIASAIQNIE 1329
[Close]
BLAST of EMLSAG00000008156 vs. L. salmonis peptides
Match: EMLSAP00000008156 (pep:novel supercontig:LSalAtl2s:LSalAtl2s488:318508:319851:-1 gene:EMLSAG00000008156 transcript:EMLSAT00000008156 description:"maker-LSalAtl2s488-snap-gene-2.6")

HSP 1 Score: 314.309 bits (804), Expect = 7.819e-111
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0 
Query:    1 MITYVLLLSVFSILVQPYHAEDACKMVLDNHNRAEMMSRNFVFGSNNLWPKKQVPYTFGPSFTSKEKSLIRKAMKKIQSGDRFIRVNWNNIISSISRYYQFARARKSGESIARCNFSKLTPYSNCYNGMTSTTLGLSYDYRSVMQYSRTA 150
            MITYVLLLSVFSILVQPYHAEDACKMVLDNHNRAEMMSRNFVFGSNNLWPKKQVPYTFGPSFTSKEKSLIRKAMKKIQSGDRFIRVNWNNIISSISRYYQFARARKSGESIARCNFSKLTPYSNCYNGMTSTTLGLSYDYRSVMQYSRTA
Sbjct:    1 MITYVLLLSVFSILVQPYHAEDACKMVLDNHNRAEMMSRNFVFGSNNLWPKKQVPYTFGPSFTSKEKSLIRKAMKKIQSGDRFIRVNWNNIISSISRYYQFARARKSGESIARCNFSKLTPYSNCYNGMTSTTLGLSYDYRSVMQYSRTA 150
[Close]
BLAST of EMLSAG00000008156 vs. L. salmonis peptides
Match: EMLSAP00000009907 (pep:novel supercontig:LSalAtl2s:LSalAtl2s645:36339:38052:1 gene:EMLSAG00000009907 transcript:EMLSAT00000009907 description:"augustus_masked-LSalAtl2s645-processed-gene-0.0")

HSP 1 Score: 230.335 bits (586), Expect = 9.549e-77
Identity = 130/189 (68.78%), Postives = 133/189 (70.37%), Query Frame = 0 
Query:    1 MITYVLLLSVFSILVQPYHAEDACKMVLDNHNRAEMMSRNFVFGSNNLWPKKQVPYTFGPSFTSKEKSLIRKAMKKIQSG---------------------------------------DRFIRVNWNNIISSISRYYQFARARKSGESIARCNFSKLTPYSNCYNGMTSTTLGLSYDYRSVMQYSRTA 150
            MITY LLLSV SILVQPY AEDACKMVLDNHNRAEMMS+ FVFGSNNLWPKKQV Y FGPSFTSKEK LIR+AM KIQS                                        D FIRVNWNN+I SISRYYQFA AR SGESI RCNFSKL PYSNC NGM STTLGLSYDYRSVMQYSRTA
Sbjct:    1 MITYALLLSVLSILVQPYPAEDACKMVLDNHNRAEMMSKIFVFGSNNLWPKKQVSYNFGPSFTSKEKYLIRRAMNKIQSRSCVRLVPRKSQKNYVQFSNDKSGCFATALDLIEXDVSLMDEFIRVNWNNVIPSISRYYQFALARASGESIPRCNFSKLIPYSNCCNGMASTTLGLSYDYRSVMQYSRTA 189
[Close]
BLAST of EMLSAG00000008156 vs. L. salmonis peptides
Match: EMLSAP00000000529 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1082:34274:35257:-1 gene:EMLSAG00000000529 transcript:EMLSAT00000000529 description:"maker-LSalAtl2s1082-augustus-gene-0.6")

HSP 1 Score: 154.836 bits (390), Expect = 2.422e-47
Identity = 91/166 (54.82%), Postives = 109/166 (65.66%), Query Frame = 0 
Query:    1 MITYVLLLSVFSILVQPYHAEDACKMVLDNHNRAEMMSRNFVFGSNNLWPKKQVPYTFGPSFTSKEKSLIRKAMKKIQSGD--RFI-RVNWNNII-------SSISRYYQFARARKSG------ESIARCNFSKLTPYSNCYNGMTSTTLGLSYDYRSVMQYSRTA 150
            MITY+LLLSV SIL+ PY AE+AC+M++D HNRAEMMS+NFVFG+NNLWP KQVPY FG  FTS EK +I++AM  IQ+     FI R    N I          +    F + R S           RC+  +LTPYSNCYNGM +TT GL YDY+SVMQYSR A
Sbjct:    4 MITYLLLLSVSSILIPPYQAEEACRMMIDKHNRAEMMSKNFVFGNNNLWPDKQVPYVFGTRFTSSEKKMIQEAMDTIQTSSCVEFIARSTQRNFIILRNDKRGXYTSALGFNQNRGSTTINLNRRMCMRCDLRRLTPYSNCYNGMXATTFGLPYDYKSVMQYSRKA 169
[Close]
BLAST of EMLSAG00000008156 vs. L. salmonis peptides
Match: EMLSAP00000003608 (pep:novel supercontig:LSalAtl2s:LSalAtl2s197:439666:441909:1 gene:EMLSAG00000003608 transcript:EMLSAT00000003608 description:"augustus_masked-LSalAtl2s197-processed-gene-3.1")

HSP 1 Score: 135.191 bits (339), Expect = 1.070e-40
Identity = 59/79 (74.68%), Postives = 69/79 (87.34%), Query Frame = 0 
Query:    1 MITYVLLLSVFSILVQPYHAEDACKMVLDNHNRAEMMSRNFVFGSNNLWPKKQVPYTFGPSFTSKEKSLIRKAMKKIQS 79
            MITY+LLL+V SIL+ PY AED CKM+LD HN+AEMMSRNF+FG+NNLWP KQVPYTFGPSFT  EKSLI++AM  IQ+
Sbjct:    1 MITYLLLLTVASILIPPYQAEDGCKMMLDKHNKAEMMSRNFIFGNNNLWPNKQVPYTFGPSFTPNEKSLIQRAMNTIQA 79
[Close]
BLAST of EMLSAG00000008156 vs. L. salmonis peptides
Match: EMLSAP00000009605 (pep:novel supercontig:LSalAtl2s:LSalAtl2s617:5548:8177:1 gene:EMLSAG00000009605 transcript:EMLSAT00000009605 description:"maker-LSalAtl2s617-snap-gene-0.28")

HSP 1 Score: 129.028 bits (323), Expect = 4.923e-38
Identity = 61/89 (68.54%), Postives = 69/89 (77.53%), Query Frame = 0 
Query:    1 MITYVLLLSVFSILVQPYHAEDACKMVLDNHNRAEMMSRNFVFGSNNLWPKKQVPYTFGPSFTSKEKSLIRKAMKKIQSGDRFIRVNWN 89
            MITY+LLL+V SIL+ PY AE AC M+LD HNRAEMMSR+FVFGSNNLWP KQVPYTFG S TS E+S IR AM  I+S     R +WN
Sbjct:    1 MITYILLLTVCSILIPPYQAEGACNMMLDKHNRAEMMSRSFVFGSNNLWPNKQVPYTFGASLTSNERSSIRSAMNIIES-----RFSWN 84
[Close]
BLAST of EMLSAG00000008156 vs. L. salmonis peptides
Match: EMLSAP00000001305 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1217:75372:75658:-1 gene:EMLSAG00000001305 transcript:EMLSAT00000001305 description:"maker-LSalAtl2s1217-snap-gene-1.13")

HSP 1 Score: 120.168 bits (300), Expect = 1.410e-35
Identity = 63/70 (90.00%), Postives = 65/70 (92.86%), Query Frame = 0 
Query:    1 MITYVLLLSVFSILVQPYHAEDACKMVLDNHNRAEMMSRNFVFGSNNLWPKKQVPYTFGPSFTSKEKSLI 70
            MITYVLLLS+ SILVQPYHAED C MVLDNHNRAEM+SRNFVFGSNN WPKKQV YTFGPSFTSKEKSLI
Sbjct:    1 MITYVLLLSLLSILVQPYHAEDPCNMVLDNHNRAEMLSRNFVFGSNNPWPKKQVSYTFGPSFTSKEKSLI 70
[Close]
BLAST of EMLSAG00000008156 vs. L. salmonis peptides
Match: EMLSAP00000004531 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2375:4575:5187:1 gene:EMLSAG00000004531 transcript:EMLSAT00000004531 description:"maker-LSalAtl2s2375-snap-gene-0.0")

HSP 1 Score: 95.5153 bits (236), Expect = 1.334e-25
Identity = 41/53 (77.36%), Postives = 48/53 (90.57%), Query Frame = 0 
Query:   27 VLDNHNRAEMMSRNFVFGSNNLWPKKQVPYTFGPSFTSKEKSLIRKAMKKIQS 79
            +LD HN+AEMMSRNFVFGSNNLWP KQVP+TFGPSFTS E+SLI++AM  IQ+
Sbjct:    1 MLDKHNKAEMMSRNFVFGSNNLWPNKQVPFTFGPSFTSNERSLIQRAMNTIQA 53
[Close]
BLAST of EMLSAG00000008156 vs. L. salmonis peptides
Match: EMLSAP00000002719 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1573:23837:25175:-1 gene:EMLSAG00000002719 transcript:EMLSAT00000002719 description:"maker-LSalAtl2s1573-snap-gene-0.5")

HSP 1 Score: 82.8037 bits (203), Expect = 9.255e-20
Identity = 49/182 (26.92%), Postives = 77/182 (42.31%), Query Frame = 0 
Query:    1 MITYVLLLSVFSILV--QPYHAEDACKMVLDNHNRAEMMSRNFVFGSNNLWPKKQVPYTFGPSFTSKEKSLIRKAMKKI---------------------------------QSGDRFIRVNWNNIISSISRYYQFARARKSGESIARCNFSKLTPYSNCYNGMTSTTLGLSYDYRSVMQYS 147
             I  V     F+I +  +    + +C++++D ++RA M SRNF+ G +N WP   VPY     F+S ++  I  A+K                                      D++++VNW NI S     +  A       +I  C    +  Y NCY G  ++T GL+YDY S+M Y 
Sbjct:    5 FIAIVFFQIFFTICLSEENVSGQGSCRVLVDTYDRAAMYSRNFIGGRSNRWPNGIVPYAISSDFSSSQRQTIMDAIKHSLHWWGWMLRKSWILGVITHELLHILGFAHEQTRPDRDQYVKVNWENIKSGTHSNFWRALGENEPATIPYCGRVGVDQYDNCYAGFRASTFGLNYDYGSIMHYG 186
[Close]
BLAST of EMLSAG00000008156 vs. L. salmonis peptides
Match: EMLSAP00000001968 (pep:novel supercontig:LSalAtl2s:LSalAtl2s134:815670:816916:1 gene:EMLSAG00000001968 transcript:EMLSAT00000001968 description:"maker-LSalAtl2s134-snap-gene-7.39")

HSP 1 Score: 74.3294 bits (181), Expect = 6.075e-17
Identity = 34/73 (46.58%), Postives = 45/73 (61.64%), Query Frame = 0 
Query:   81 DRFIRVNWNNIISSISRYYQFARARKSGESIARCN---FSKLTPYSNCYNGMTSTTLGLSYDYRSVMQYSRTA 150
            D +I++NWNNI S+   YYQFAR +   E +  C    F +L P+  CYNG  + T GL YDY+SVM Y+  A
Sbjct:  136 DNYIQINWNNIESNPRAYYQFARGKFPYEEMPECKTHLFYRLKPFVECYNGFETLTFGLPYDYKSVMHYTAFA 208
[Close]
BLAST of EMLSAG00000008156 vs. L. salmonis peptides
Match: EMLSAP00000009443 (pep:novel supercontig:LSalAtl2s:LSalAtl2s605:86139:87526:1 gene:EMLSAG00000009443 transcript:EMLSAT00000009443 description:"maker-LSalAtl2s605-augustus-gene-1.13")

HSP 1 Score: 67.3958 bits (163), Expect = 2.681e-14
Identity = 29/66 (43.94%), Postives = 41/66 (62.12%), Query Frame = 0 
Query:   81 DRFIRVNWNNIISSISRYYQFARARKSGESIARCNFSKLTPYSNCYNGMTSTTLGLSYDYRSVMQY 146
            DR++++ WNNI  + + Y+QF R+R   E I  CN  +L PY NC    T+ T G  YDY+S+M Y
Sbjct:  157 DRYVKIQWNNIKDNKNDYHQFIRSRFWREPIKTCNERRLMPYDNCAKRSTTVTYGFPYDYKSIMHY 222
The following BLAST results are available for this feature:
BLAST of EMLSAG00000008156 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000008156 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25
Match NameE-valueIdentityDescription
gi|592862260|gb|GAXK01095302.1|4.230e-436.99TSA: Calanus finmarchicus comp1395496_c0_seq1 tran... [more]
gi|592895097|gb|GAXK01063278.1|6.977e-431.58TSA: Calanus finmarchicus comp809664_c3_seq1 trans... [more]
gi|592909094|gb|GAXK01049281.1|8.408e-446.67TSA: Calanus finmarchicus comp6411935_c0_seq1 tran... [more]
gi|592860042|gb|GAXK01097520.1|3.704e-337.50TSA: Calanus finmarchicus comp38151_c0_seq1 transc... [more]
gi|592940370|gb|GAXK01018183.1|1.110e-233.82TSA: Calanus finmarchicus comp32024_c0_seq1 transc... [more]
gi|592772341|gb|GAXK01182227.1|1.437e-222.76TSA: Calanus finmarchicus comp2584565_c0_seq1 tran... [more]
gi|592762271|gb|GAXK01192142.1|1.852e-241.18TSA: Calanus finmarchicus comp41795_c0_seq2 transc... [more]
gi|592762272|gb|GAXK01192141.1|1.854e-241.18TSA: Calanus finmarchicus comp41795_c0_seq1 transc... [more]
gi|592954695|gb|GAXK01003858.1|4.017e-245.16TSA: Calanus finmarchicus comp2093481_c1_seq1 tran... [more]
gi|592957439|gb|GAXK01001117.1|4.061e-230.14TSA: Calanus finmarchicus comp1762764_c0_seq2 tran... [more]

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BLAST of EMLSAG00000008156 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 25
Match NameE-valueIdentityDescription
EMLSAP000000081567.819e-111100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s488:31850... [more]
EMLSAP000000099079.549e-7768.78pep:novel supercontig:LSalAtl2s:LSalAtl2s645:36339... [more]
EMLSAP000000005292.422e-4754.82pep:novel supercontig:LSalAtl2s:LSalAtl2s1082:3427... [more]
EMLSAP000000036081.070e-4074.68pep:novel supercontig:LSalAtl2s:LSalAtl2s197:43966... [more]
EMLSAP000000096054.923e-3868.54pep:novel supercontig:LSalAtl2s:LSalAtl2s617:5548:... [more]
EMLSAP000000013051.410e-3590.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1217:7537... [more]
EMLSAP000000045311.334e-2577.36pep:novel supercontig:LSalAtl2s:LSalAtl2s2375:4575... [more]
EMLSAP000000027199.255e-2026.92pep:novel supercontig:LSalAtl2s:LSalAtl2s1573:2383... [more]
EMLSAP000000019686.075e-1746.58pep:novel supercontig:LSalAtl2s:LSalAtl2s134:81567... [more]
EMLSAP000000094432.681e-1443.94pep:novel supercontig:LSalAtl2s:LSalAtl2s605:86139... [more]

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BLAST of EMLSAG00000008156 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000008156 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000008156 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000008156 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s488supercontigLSalAtl2s488:318508..319851 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s488-snap-gene-2.6
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000008156 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000008156EMLSAT00000008156-704003Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s488:318508..319851-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000008156-690922 ID=EMLSAG00000008156-690922|Name=EMLSAG00000008156|organism=Lepeophtheirus salmonis|type=gene|length=1344bp|location=Sequence derived from alignment at LSalAtl2s488:318508..319851- (Lepeophtheirus salmonis)
ACAGAAGAATAAAGATGATTACTTATGTTTTACTTCTGAGTGTTTTCTCT
ATCCTCGTTCAGCCTTACCACGCTGAAGGTCAAAATTCAAAAGGTTTGAT
AACATTTATACAAATTAATATTTTTTTCCCCCCGGTTTACACAGATGCCT
GCAAAATGGTGCTTGACAACCATAATAGGGCTGAAATGATGTCCAGGAAT
TTTGTTTTTGGTAGCAACAATCTCTGGCCTAAAAAACAAGTACCTTATAC
CTTTGGACCAAGTTTTACATCTAAGGAAAAGTCCTTGATTCGAAAAGCGA
TGAAAAAAATTCAATCAGGGTCTTGTGTTAGATTTGTTCCTCGAAGAAGT
CAAAAAAACTATGTTCAATTTAGAAATGATAAGAGCGGCTGTTTTGCAAC
TGCAATTGGATTTAATCGAAAWAGACGMGTCATTGTTGTGAATTTAAGTA
GAAGAGGGTGTATGGTAAGTACAAAAATTAAACAAACTGATTTCTTTCCA
TCACATTTCGTTGTATTTCTATCTGTCTCGTCTTTATTTTGCTAAGGAAT
AGAAAATAAATGTTTTAATCAGTGTTGTGTCTATCCCTATTTAATGAACG
TAGTAAAGTTTGATTAATTGATTCCTTTATAGCCTTATTTTTTTACTATT
ACCCTCATGGCATTAACAAAAAGGGCATAAAGTTTTTTTTTTGTTTTTTT
GCCTATTTATAAGCTTCAAAGCTTTTTTAAGTGCCTGATGTTGAAGATTG
GGATACACTATTAGAGTATATTTCAAGGTTCTATATTCCTTTTTAAAATG
TCTTTATAATGTTTACAACCCAAATTATCTTTGTTTGAAATTAAAAAAGG
GTATTTTTTATTCAGAGACTCGCAACCTCGGGAAGAATACATTCATAAAA
TTTAAAAATATCCTATTTGATKCCTAAGAGAAGCCCCTCAAAAAAGCTTA
GAAGACATAAGGCCACCCCAATATTAAAAGAATAAATATCACATTGAAAT
TGATCTTATAAGAAAGGCCTTGCTTGCTATAGTAGCAAGGAATAATAATC
ATTTATTTTTAGGGTCAAGCAACAATTATTCATGAATTGTTTCATGTACT
TGGCTTTCTACATGAACAAAATCGACCTGATAGGGATCGATTTATTCGTG
TGAACTGGAATAATATTATATCATCAATTAGTCGATATTATCAATTTGCT
CGAGCCCGAAAATCTGGAGAAAGTATAGCACGATGCAACTTTAGCAAACT
TACACCTTATTCAAATTGTTATAATGGAATGACGTCCACAACATTAGGGC
TTTCTTATGATTACCGATCCGTCATGCAATATTCAAGGACAGCG
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