EMLSAG00000009211, EMLSAG00000009211-691977 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000009211 vs. C. finmarchicus
Match: gi|592935011|gb|GAXK01023542.1| (TSA: Calanus finmarchicus comp115244_c1_seq2 transcribed RNA sequence) HSP 1 Score: 89.7373 bits (221), Expect = 1.541e-20 Identity = 64/191 (33.51%), Postives = 101/191 (52.88%), Query Frame = 0 Query: 9 QEDVGSGRSIFPWYFPFLPQWKGVNIGGEFNTIKSPEDVGFFMTRAFSSLLISNIGWLIVHILFWRGTVTR----SDELQFPFNIITLFFGSNDSGDSDELLLPNSEGEINGNDLINFYTDPKVATQNLIISGGFTLFTLLLWIIPTFFWSGRPLPTKNTDSRVSRLYNIIDHVRSGGNSVDIYNRLLCPQ 195 E+ GSGR FP LP ++GV+ G FN +KS D G+F+ R L N+ W+++H L W G V+ + L P + L ++ + L +S E++ L NF+TDP +T+NL ++ GF + +LWI+PTF + P K D RL + ++ +G + + ++NRLLCPQ Sbjct: 174 SENQGSGR-----VFPLLPPYQGVDFGANFNKLKSSGDAGYFVVRDSIVFLGVNLMWIVIHSLIWDGKVSNLQDITTSLLSPGQTVPL----SNPTSASSRLSLDSLSELSFVKLWNFFTDPNPSTRNLFLNIGFAVGGHILWILPTFLGT-LPDAEKRADDSEDRLGGLPSNL-AGADPIALWNRLLCPQ 713
BLAST of EMLSAG00000009211 vs. C. finmarchicus
Match: gi|592935012|gb|GAXK01023541.1| (TSA: Calanus finmarchicus comp115244_c1_seq1 transcribed RNA sequence) HSP 1 Score: 89.3521 bits (220), Expect = 1.856e-20 Identity = 64/195 (32.82%), Postives = 97/195 (49.74%), Query Frame = 0 Query: 9 QEDVGSGRSIFPWYFPFLPQWKGVNIGGEFNTIKSPEDVGFFMTRAFSSLLISNIGWLIVHILFWRGTVTR----SDELQFPFNIITLFFGSNDSGDSDELLLPNSEGEINGN----DLINFYTDPKVATQNLIISGGFTLFTLLLWIIPTFFWSGRPLPTKNTDSRVSRLYNIIDHVRSGGNSVDIYNRLLCPQ 195 E+ GSGR FP LP ++GV+ G FN +KS D G+F+ R L N+ W+++H L W G V+ + L P + L SN + S + L NF+TDP +T+NL ++ GF + +LWI+PTF + P K D RL + ++ +G + + ++NRLLCPQ Sbjct: 174 SENQGSGR-----VFPLLPPYQGVDFGANFNKLKSSGDAGYFVVRDSIVFLGVNLMWIVIHSLIWDGKVSNLQDITTSLLSPGQTVPL---SNPASKSSSSASSRLSLDSLSELSFVKLWNFFTDPNPSTRNLFLNIGFAVGGHILWILPTFLGT-LPDAEKRADDSEDRLGGLPSNL-AGADPIALWNRLLCPQ 728
BLAST of EMLSAG00000009211 vs. C. finmarchicus
Match: gi|592930442|gb|GAXK01028103.1| (TSA: Calanus finmarchicus comp710900_c0_seq1 transcribed RNA sequence) HSP 1 Score: 85.1149 bits (209), Expect = 1.672e-18 Identity = 66/227 (29.07%), Postives = 106/227 (46.70%), Query Frame = 0 Query: 7 VLQEDVGSGRSIFPWYFPFLPQWKGVNIGGEFNTIKSPEDVGFFMTRAFSSLLISNIGWLIVHILFWRGTVTRSDELQF---------------------PFNIITLFFGSNDSGDSDELLLPNSEGEINGNDLINFYTDPKVATQNLIISGGFTLFTLLLWIIPTFFWSGRPLPTKNT----DSRVSRLYNIID-----HVRSGG--------NSVDIYNRLLCPQ 195 L +D G+GR + + FLPQ++ V+I FN +KS D +F+ R L + WL++H L W G V+ +++ P + S+D+ + +S E++ + N++TDP +T+NL ++ GF L + LLWI+PTFF + LP + T DS +L ++D R GG VD++NR L PQ Sbjct: 433 ALSDDQGTGRLML---WRFLPQYQDVDIAANFNKLKSSGDAAYFVVRDTIVYLGVQLMWLVIHSLIWDGKVSSYEDMALSLLSPGIDVALSEPTSKSPDSPSRKASETSESSDTQLASSRFTLDSLSELSFTKIWNYFTDPNPSTRNLYLNIGFALGSHLLWILPTFFGT---LPEERTEERFDSESVQLGTLLDPDFEAADRLGGLPANLLGAELVDLWNRTLSPQ 1095
BLAST of EMLSAG00000009211 vs. C. finmarchicus
Match: gi|592943263|gb|GAXK01015290.1| (TSA: Calanus finmarchicus comp631634_c0_seq2 transcribed RNA sequence) HSP 1 Score: 67.781 bits (164), Expect = 6.640e-13 Identity = 48/192 (25.00%), Postives = 83/192 (43.23%), Query Frame = 0 Query: 16 RSIFPWYFPFLPQWKGVNIGGEFNTIKSPEDVGFFMTRAFSSLLISNIGWLIVHILFWRGTVTRSDELQFPFNIITLFFGSNDSGDSDELLLPNSEGEINGNDLINFYTDPKVATQNLIISGGFTLFTLLLWIIPTFFWSGR-PLPTKNTDSRVS------------RLYNIIDHVRSGGNSVDIYNRLLCP 194 RSIF Q+K V + +N K + V + + R F+ L + W+ +H+ WRG T+ ++ +F D +L + ++ + + +F+ +P+ +NL++ F L T W +P+ W LP DS R+ I+ + + G + DIYNRLLCP Sbjct: 189 RSIFK-------QFKNVKLSDVWNEAKGEKVVSYTIARDFTQYLAVQLMWITLHLFAWRGPATQ---------LVDIF------TREDAILEKDFTENVDLSKIGSFFMNPQTVARNLLVCTSFFLITSTFWFVPSLLWKKSFLLPNSKDDSTAESSLADTVHSSQERVSGIVSAIANTGVA-DIYNRLLCP 695
BLAST of EMLSAG00000009211 vs. C. finmarchicus
Match: gi|592943264|gb|GAXK01015289.1| (TSA: Calanus finmarchicus comp631634_c0_seq1 transcribed RNA sequence) HSP 1 Score: 67.781 bits (164), Expect = 7.409e-13 Identity = 48/192 (25.00%), Postives = 83/192 (43.23%), Query Frame = 0 Query: 16 RSIFPWYFPFLPQWKGVNIGGEFNTIKSPEDVGFFMTRAFSSLLISNIGWLIVHILFWRGTVTRSDELQFPFNIITLFFGSNDSGDSDELLLPNSEGEINGNDLINFYTDPKVATQNLIISGGFTLFTLLLWIIPTFFWSGR-PLPTKNTDSRVS------------RLYNIIDHVRSGGNSVDIYNRLLCP 194 RSIF Q+K V + +N K + V + + R F+ L + W+ +H+ WRG T+ ++ +F D +L + ++ + + +F+ +P+ +NL++ F L T W +P+ W LP DS R+ I+ + + G + DIYNRLLCP Sbjct: 189 RSIFK-------QFKNVKLSDVWNEAKGEKVVSYTIARDFTQYLAVQLMWITLHLFAWRGPATQ---------LVDIF------TREDAILEKDFTENVDLSKIGSFFMNPQTVARNLLVCTSFFLITSTFWFVPSLLWKKSFLLPNSKDDSTAESSLADTVHSSQERVSGIVSAIANTGVA-DIYNRLLCP 695
BLAST of EMLSAG00000009211 vs. C. finmarchicus
Match: gi|592930440|gb|GAXK01028105.1| (TSA: Calanus finmarchicus comp710900_c1_seq1 transcribed RNA sequence) HSP 1 Score: 54.299 bits (129), Expect = 7.287e-9 Identity = 37/143 (25.87%), Postives = 66/143 (46.15%), Query Frame = 0 Query: 46 DVGFFMTRAFSSLLISNIGWLIVHILFWRGTVTRSDELQF---------------------PFNIITLFFGSNDSGDSDELLLPNSEGEINGNDLINFYTDPKVATQNLIISGGFTLFTLLLWIIPTFFWSGRPLPTKNTDSR 167 D +F+ R L + W+++H L W G V+ +++ P + S+D+ + +S E++ + N++TDP +T+NL ++ GF L + LLWI+PTFF + LP + T+ R Sbjct: 45 DAAYFVVRDTIVYLGVQLMWIVIHSLIWDGKVSSYEDMALSLLSPGIDVALSEPTSKSSESPSRKASETSESSDTQLASSRFTLDSLSELSFTKIWNYFTDPNPSTRNLYLNIGFALGSHLLWILPTFFGT---LPEERTEER 464
BLAST of EMLSAG00000009211 vs. C. finmarchicus
Match: gi|592943261|gb|GAXK01015292.1| (TSA: Calanus finmarchicus comp631634_c0_seq4 transcribed RNA sequence) HSP 1 Score: 46.595 bits (109), Expect = 1.362e-5 Identity = 28/105 (26.67%), Postives = 48/105 (45.71%), Query Frame = 0 Query: 103 DELLLPNSEGEINGNDLINFYTDPKVATQNLIISGGFTLFTLLLWIIPTFFWSGR-PLPTKNTDSRVS------------RLYNIIDHVRSGGNSVDIYNRLLCP 194 D +L + ++ + + +F+ +P+ +NL++ F L T W +P+ W LP DS R+ I+ + + G + DIYNRLLCP Sbjct: 189 DAILEKDFTENVDLSKIGSFFMNPQTVARNLLVCTSFFLITSTFWFVPSLLWKKSFLLPNSKDDSTAESSLADTVHSSQERVSGIVSAIANTGVA-DIYNRLLCP 500
BLAST of EMLSAG00000009211 vs. C. finmarchicus
Match: gi|592943262|gb|GAXK01015291.1| (TSA: Calanus finmarchicus comp631634_c0_seq3 transcribed RNA sequence) HSP 1 Score: 46.595 bits (109), Expect = 1.592e-5 Identity = 28/105 (26.67%), Postives = 47/105 (44.76%), Query Frame = 0 Query: 103 DELLLPNSEGEINGNDLINFYTDPKVATQNLIISGGFTLFTLLLWIIPTFFWSGR-PLPTKNTDSRVS------------RLYNIIDHVRSGGNSVDIYNRLLCP 194 D +L + ++ + + +F+ +P+ +NL++ F L T W +P+ W LP DS R+ I+ + + G DIYNRLLCP Sbjct: 189 DAILEKDFTENVDLSKIGSFFMNPQTVARNLLVCTSFFLITSTFWFVPSLLWKKSFLLPNSKDDSTAESSLADTVHSSQERVSGIVSAIANTG-VADIYNRLLCP 500
BLAST of EMLSAG00000009211 vs. C. finmarchicus
Match: gi|592833367|gb|GAXK01124177.1| (TSA: Calanus finmarchicus comp257662_c7_seq7 transcribed RNA sequence) HSP 1 Score: 35.039 bits (79), Expect = 1.570e-1 Identity = 34/135 (25.19%), Postives = 55/135 (40.74%), Query Frame = 0 Query: 57 SLLISNIGWLIVHILFW--RGTVTRSDELQFPFNIIT---LFFGSNDSGDSDELLLPNSEGEINGNDLINFYTDPKVATQNLIISGGFTLFTLLLWIIPTFFWSGRPLPTKNTDSRVSRLYNIIDHVRSGGNSVD 186 +LL + IGW I+ ILF R V R+ + I +FFG +D ++D+ S+ +N ND DP+VA +G P + + ++DH++ GGN+ D Sbjct: 227 NLLTNCIGWTILMILFIMIRKNVVRTMGFRLATTTIQWTQIFFGGDDQIENDD-----SDKSLNPND------DPQVA-------------------------AGEPKAESEVLCKEEADHVVVDHLQPGGNAPD 523
BLAST of EMLSAG00000009211 vs. C. finmarchicus
Match: gi|592833371|gb|GAXK01124173.1| (TSA: Calanus finmarchicus comp257662_c7_seq3 transcribed RNA sequence) HSP 1 Score: 35.039 bits (79), Expect = 1.661e-1 Identity = 34/135 (25.19%), Postives = 55/135 (40.74%), Query Frame = 0 Query: 57 SLLISNIGWLIVHILFW--RGTVTRSDELQFPFNIIT---LFFGSNDSGDSDELLLPNSEGEINGNDLINFYTDPKVATQNLIISGGFTLFTLLLWIIPTFFWSGRPLPTKNTDSRVSRLYNIIDHVRSGGNSVD 186 +LL + IGW I+ ILF R V R+ + I +FFG +D ++D+ S+ +N ND DP+VA +G P + + ++DH++ GGN+ D Sbjct: 227 NLLTNCIGWTILMILFIMIRKNVVRTMGFRLATTTIQWTQIFFGGDDQIENDD-----SDKSLNPND------DPQVA-------------------------AGEPKAESEVLCKEEADHVVVDHLQPGGNAPD 523
BLAST of EMLSAG00000009211 vs. L. salmonis peptides
Match: EMLSAP00000009211 (pep:novel supercontig:LSalAtl2s:LSalAtl2s586:131335:134460:1 gene:EMLSAG00000009211 transcript:EMLSAT00000009211 description:"maker-LSalAtl2s586-snap-gene-1.35") HSP 1 Score: 398.667 bits (1023), Expect = 1.953e-142 Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0 Query: 1 MRVKKKVLQEDVGSGRSIFPWYFPFLPQWKGVNIGGEFNTIKSPEDVGFFMTRAFSSLLISNIGWLIVHILFWRGTVTRSDELQFPFNIITLFFGSNDSGDSDELLLPNSEGEINGNDLINFYTDPKVATQNLIISGGFTLFTLLLWIIPTFFWSGRPLPTKNTDSRVSRLYNIIDHVRSGGNSVDIYNRLLCPQFFR 198 MRVKKKVLQEDVGSGRSIFPWYFPFLPQWKGVNIGGEFNTIKSPEDVGFFMTRAFSSLLISNIGWLIVHILFWRGTVTRSDELQFPFNIITLFFGSNDSGDSDELLLPNSEGEINGNDLINFYTDPKVATQNLIISGGFTLFTLLLWIIPTFFWSGRPLPTKNTDSRVSRLYNIIDHVRSGGNSVDIYNRLLCPQFFR Sbjct: 1 MRVKKKVLQEDVGSGRSIFPWYFPFLPQWKGVNIGGEFNTIKSPEDVGFFMTRAFSSLLISNIGWLIVHILFWRGTVTRSDELQFPFNIITLFFGSNDSGDSDELLLPNSEGEINGNDLINFYTDPKVATQNLIISGGFTLFTLLLWIIPTFFWSGRPLPTKNTDSRVSRLYNIIDHVRSGGNSVDIYNRLLCPQFFR 198
BLAST of EMLSAG00000009211 vs. L. salmonis peptides
Match: EMLSAP00000000856 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1144:10023:12314:1 gene:EMLSAG00000000856 transcript:EMLSAT00000000856 description:"maker-LSalAtl2s1144-snap-gene-0.7") HSP 1 Score: 101.679 bits (252), Expect = 1.983e-27 Identity = 44/68 (64.71%), Postives = 54/68 (79.41%), Query Frame = 0 Query: 128 VATQNLIISGGFTLFTLLLWIIPTFFWSGRPLPTKNTDSRVSRLYNIIDHVRSGGNSVDIYNRLLCPQ 195 AT+NL +SGGF+ F L+LW++PTF W+G PLPTK+ R SR NII HVRSG N+VDIYNRL+CPQ Sbjct: 2 AATRNLYLSGGFSFFALVLWLLPTFLWTGTPLPTKSKKRRESRFINIIKHVRSGSNAVDIYNRLMCPQ 69
BLAST of EMLSAG00000009211 vs. L. salmonis peptides
Match: EMLSAP00000007317 (pep:novel supercontig:LSalAtl2s:LSalAtl2s411:13808:14618:-1 gene:EMLSAG00000007317 transcript:EMLSAT00000007317 description:"snap_masked-LSalAtl2s411-processed-gene-0.4") HSP 1 Score: 77.7962 bits (190), Expect = 1.920e-18 Identity = 35/69 (50.72%), Postives = 46/69 (66.67%), Query Frame = 0 Query: 128 VATQNLIISGGFTLFTLLLWIIPTFFWSGRPLPTKNTDSRVSRLYNIIDHVRSGGNSVDIYNRLLCPQF 196 AT+NL +SGGF+ F L+LW++PTF W+G PLPT + R SR NI+ HVRSG N+V L +F Sbjct: 2 AATRNLYLSGGFSFFALVLWLLPTFLWTGTPLPTNSDKKRESRFINIVKHVRSGSNAVAYVKIYLLVRF 70
BLAST of EMLSAG00000009211 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold374_size191929-processed-gene-0.18 (protein:Tk01260 transcript:snap_masked-scaffold374_size191929-processed-gene-0.18-mRNA-1 annotation:"periplasmic solute binding family protein") HSP 1 Score: 109.768 bits (273), Expect = 5.791e-29 Identity = 71/226 (31.42%), Postives = 113/226 (50.00%), Query Frame = 0 Query: 13 GSGRSIFPWYFPFLPQWKGVNIGGEFNTIKSPEDVGFFMTRAFSSLLISNIGWLIVHILFWRGTVTRSDELQ-----------FPFNIITLFFGSNDSGD---------------SDELLLPNSEGEINGNDLINFYTDPKVATQNLIISGGFTLFTLLLWIIPTFFWSGRPLPT-KNTDSRVSR------LYNIIDHVRSG--------GNSVDIYNRLLCPQFF 197 G+ R + FPF Q++ +++G N +KSP + FF+ R + L W+++H +FW G + ++DEL F ++F S++ GD ++E L+ S EI+ N + NF+ DP + +NLI++ GF F L++W +PTFFW G PLPT +N + +S + N + R G + V I+NRLLCPQ F Sbjct: 44 GTPRVFTSFIFPFFRQYQSIDLGQNLNNLKSPNTMAFFVIRDAVAYLALVTTWILMHTIFWDGRL-KADELDRVPLFIRLLSGFVSGSDSMFRRSDEGGDVPEDEFQTRFGYTDQAEEKLIAESLPEISANGIFNFFADPNPSFRNLIMNSGFLAFQLIIWFLPTFFWPGSPLPTPQNMNQTISSPGEGIGIENPLAQNRVGAFVHNLGEASPVAIHNRLLCPQCF 268 The following BLAST results are available for this feature:
BLAST of EMLSAG00000009211 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000009211 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 19
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BLAST of EMLSAG00000009211 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 3
BLAST of EMLSAG00000009211 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000009211 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000009211 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000009211 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s586:131335..134460+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000009211-691977 ID=EMLSAG00000009211-691977|Name=EMLSAG00000009211|organism=Lepeophtheirus salmonis|type=gene|length=3126bp|location=Sequence derived from alignment at LSalAtl2s586:131335..134460+ (Lepeophtheirus salmonis)back to top Add to Basket
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