EMLSAG00000010049, EMLSAG00000010049-692815 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000010049
Unique NameEMLSAG00000010049-692815
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
BLAST of EMLSAG00000010049 vs. GO
Match: - (symbol:C901 "C901" species:7227 "Drosophila melanogaster" [GO:0007154 "cell communication" evidence=IEA] [GO:0016020 "membrane" evidence=IEA] InterPro:IPR000742 InterPro:IPR001774 PROSITE:PS50026 PROSITE:PS51051 SMART:SM00181 GO:GO:0016020 EMBL:AE014298 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186 GO:GO:0007154 Pfam:PF12661 GeneTree:ENSGT00660000095436 FlyBase:FBgn0021742 EMBL:BT122182 RefSeq:NP_572673.1 UniGene:Dm.17523 SMR:Q9VZ44 IntAct:Q9VZ44 MINT:MINT-321109 EnsemblMetazoa:FBtr0073400 GeneID:32032 KEGG:dme:Dmel_CG1567 UCSC:CG1567-RA CTD:32032 InParanoid:Q9VZ44 OMA:NIPLWKQ GenomeRNAi:32032 NextBio:776461 Uniprot:Q9VZ44)

HSP 1 Score: 49.6766 bits (117), Expect = 1.235e-6
Identity = 27/100 (27.00%), Postives = 45/100 (45.00%), Query Frame = 0
Query:    2 LFLVFTIFLVSLFSSGTSSNRFHQLSSGQIHTPVSKSAYACSAERLKETEKYICNGRGEIICMRGWSNPDYLCEVPTCSKTC--VHGKCVGPEMCACELG 99
            L LV  I  + L         F    S   + P+ K      +++ ++   Y+C+ +G+  C+ GW     LC+VP C + C  ++G C  P  C C +G
Sbjct:    9 LLLVTAITALKLEEMNAYRRNFDARQSSNSNIPLWKQRACEKSQKQRQNAHYVCDEKGDFKCLPGWQG--DLCQVPMCRRGCDPMNGYCQRPGECRCRIG 106          
BLAST of EMLSAG00000010049 vs. GO
Match: - (symbol:Dl "Delta" species:7227 "Drosophila melanogaster" [GO:0005112 "Notch binding" evidence=NAS;IDA;TAS;IPI] [GO:0005886 "plasma membrane" evidence=IDA] [GO:0007398 "ectoderm development" evidence=NAS;TAS] [GO:0007498 "mesoderm development" evidence=IMP] [GO:0007219 "Notch signaling pathway" evidence=IGI;IMP;NAS;TAS] [GO:0007422 "peripheral nervous system development" evidence=IMP;TAS] [GO:0007475 "apposition of dorsal and ventral imaginal disc-derived wing surfaces" evidence=IMP] [GO:0031410 "cytoplasmic vesicle" evidence=IDA] [GO:0005912 "adherens junction" evidence=IDA] [GO:0030707 "ovarian follicle cell development" evidence=IMP;TAS] [GO:0001708 "cell fate specification" evidence=TAS] [GO:0036011 "imaginal disc-derived leg segmentation" evidence=IMP] [GO:0007417 "central nervous system development" evidence=NAS] [GO:0016021 "integral component of membrane" evidence=IEA;NAS;TAS] [GO:0007424 "open tracheal system development" evidence=NAS] [GO:0035155 "negative regulation of terminal cell fate specification, open tracheal system" evidence=NAS] [GO:0035157 "negative regulation of fusion cell fate specification" evidence=NAS] [GO:0048749 "compound eye development" evidence=TAS] [GO:0007399 "nervous system development" evidence=NAS] [GO:0007460 "R8 cell fate commitment" evidence=TAS] [GO:0007155 "cell adhesion" evidence=TAS] [GO:0048800 "antennal morphogenesis" evidence=IMP] [GO:0007480 "imaginal disc-derived leg morphogenesis" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP;TAS] [GO:0007451 "dorsal/ventral lineage restriction, imaginal disc" evidence=TAS] [GO:0045465 "R8 cell differentiation" evidence=NAS] [GO:0045468 "regulation of R8 cell spacing in compound eye" evidence=NAS] [GO:0046667 "compound eye retinal cell programmed cell death" evidence=TAS] [GO:0016318 "ommatidial rotation" evidence=NAS] [GO:0046331 "lateral inhibition" evidence=IMP;NAS;TAS] [GO:0042067 "establishment of ommatidial planar polarity" evidence=TAS] [GO:0042676 "compound eye cone cell fate commitment" evidence=TAS] [GO:0001736 "establishment of planar polarity" evidence=NAS] [GO:0007464 "R3/R4 cell fate commitment" evidence=NAS] [GO:0007474 "imaginal disc-derived wing vein specification" evidence=NAS] [GO:0007419 "ventral cord development" evidence=NAS] [GO:0005102 "receptor binding" evidence=NAS] [GO:0007314 "oocyte anterior/posterior axis specification" evidence=TAS] [GO:0030713 "ovarian follicle cell stalk formation" evidence=IMP] [GO:0030720 "oocyte localization involved in germarium-derived egg chamber formation" evidence=IMP] [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0008356 "asymmetric cell division" evidence=TAS] [GO:0008586 "imaginal disc-derived wing vein morphogenesis" evidence=TAS] [GO:0016330 "second mitotic wave involved in compound eye morphogenesis" evidence=IMP] [GO:0045931 "positive regulation of mitotic cell cycle" evidence=IMP] [GO:0008284 "positive regulation of cell proliferation" evidence=IMP] [GO:0007476 "imaginal disc-derived wing morphogenesis" evidence=IMP] [GO:0048190 "wing disc dorsal/ventral pattern formation" evidence=IMP] [GO:0007015 "actin filament organization" evidence=IMP] [GO:0007423 "sensory organ development" evidence=IMP] [GO:0008407 "chaeta morphogenesis" evidence=IMP] [GO:0050768 "negative regulation of neurogenesis" evidence=IMP] [GO:0007298 "border follicle cell migration" evidence=IMP] [GO:0008347 "glial cell migration" evidence=IMP] [GO:0035003 "subapical complex" evidence=IDA] [GO:0030139 "endocytic vesicle" evidence=IDA] [GO:0030718 "germ-line stem cell maintenance" evidence=IMP] [GO:0048863 "stem cell differentiation" evidence=IMP] [GO:0009986 "cell surface" evidence=IDA] [GO:0005768 "endosome" evidence=IDA] InterPro:IPR000742 InterPro:IPR001774 InterPro:IPR001881 InterPro:IPR011651 InterPro:IPR018097 Pfam:PF00008 Pfam:PF01414 Pfam:PF07645 Pfam:PF07657 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51051 SMART:SM00051 SMART:SM00179 SMART:SM00181 InterPro:IPR000152 EMBL:AE014297 GO:GO:0016021 GO:GO:0001708 GO:GO:0048190 GO:GO:0009986 GO:GO:0005509 GO:GO:0007498 GO:GO:0045931 GO:GO:0008284 GO:GO:0005768 GO:GO:0007474 GO:GO:0007464 GO:GO:0007419 GO:GO:0007155 GO:GO:0007219 GO:GO:0007422 GO:GO:0005112 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0007298 GO:GO:0005912 GO:GO:0030139 PROSITE:PS01186 GO:GO:0046331 PROSITE:PS00010 GO:GO:0007015 GO:GO:0007398 GO:GO:0008356 GO:GO:0030718 GO:GO:0007451 GO:GO:0036011 GO:GO:0050768 GO:GO:0046667 GO:GO:0030720 GO:GO:0008347 GO:GO:0030713 GO:GO:0008407 GO:GO:0007475 GO:GO:0016330 GO:GO:0007314 InterPro:IPR009030 SUPFAM:SSF57184 GO:GO:0007424 GO:GO:0035003 GO:GO:0016318 eggNOG:NOG249767 KO:K06051 OrthoDB:EOG7GQXZ5 GeneTree:ENSGT00740000115139 EMBL:X06289 EMBL:Y00222 EMBL:AY437145 EMBL:AY437140 EMBL:AY437141 EMBL:AY437142 EMBL:AY437143 EMBL:AY437144 EMBL:AY437151 EMBL:AY437146 EMBL:AY437147 EMBL:AY437148 EMBL:AY437149 EMBL:AY437150 EMBL:AY437157 EMBL:AY437152 EMBL:AY437153 EMBL:AY437154 EMBL:AY437155 EMBL:AY437156 EMBL:AY437163 EMBL:AY437158 EMBL:AY437159 EMBL:AY437160 EMBL:AY437161 EMBL:AY437162 EMBL:AY437169 EMBL:AY437164 EMBL:AY437165 EMBL:AY437166 EMBL:AY437167 EMBL:AY437168 EMBL:AY437175 EMBL:AY437170 EMBL:AY437171 EMBL:AY437172 EMBL:AY437173 EMBL:AY437174 EMBL:AY437181 EMBL:AY437176 EMBL:AY437177 EMBL:AY437178 EMBL:AY437179 EMBL:AY437180 EMBL:AY437187 EMBL:AY437182 EMBL:AY437183 EMBL:AY437184 EMBL:AY437185 EMBL:AY437186 EMBL:AY437193 EMBL:AY437188 EMBL:AY437189 EMBL:AY437190 EMBL:AY437191 EMBL:AY437192 EMBL:AY437199 EMBL:AY437194 EMBL:AY437195 EMBL:AY437196 EMBL:AY437197 EMBL:AY437198 EMBL:AY437205 EMBL:AY437200 EMBL:AY437201 EMBL:AY437202 EMBL:AY437203 EMBL:AY437204 EMBL:AY437211 EMBL:AY437206 EMBL:AY437207 EMBL:AY437208 EMBL:AY437209 EMBL:AY437210 EMBL:AY437217 EMBL:AY437212 EMBL:AY437213 EMBL:AY437214 EMBL:AY437215 EMBL:AY437216 EMBL:AY437223 EMBL:AY437218 EMBL:AY437219 EMBL:AY437220 EMBL:AY437221 EMBL:AY437222 EMBL:AY437229 EMBL:AY437224 EMBL:AY437225 EMBL:AY437226 EMBL:AY437227 EMBL:AY437228 EMBL:AY437235 EMBL:AY437230 EMBL:AY437231 EMBL:AY437232 EMBL:AY437233 EMBL:AY437234 EMBL:AY438104 EMBL:AY438105 EMBL:AY438106 EMBL:AY438107 EMBL:AY438108 EMBL:AY438109 EMBL:AY438110 EMBL:AY438111 EMBL:AY438112 EMBL:AY438113 EMBL:AY438114 EMBL:AY438115 EMBL:AY438116 EMBL:AY438117 EMBL:AY438118 EMBL:AY438119 EMBL:AY438120 EMBL:AY438121 EMBL:AY438122 EMBL:AY438123 EMBL:AY438124 EMBL:AY438125 EMBL:AY438126 EMBL:AY438127 EMBL:AY438128 EMBL:AY438129 EMBL:AY438130 EMBL:AY438131 EMBL:AY438132 EMBL:AY438133 EMBL:AY438134 EMBL:AY438135 EMBL:AY438136 EMBL:AY438137 EMBL:AY438138 EMBL:AY438139 EMBL:AY438140 EMBL:AY438141 EMBL:AY438147 EMBL:AY438148 EMBL:AY438149 EMBL:AY438150 EMBL:AY438151 EMBL:AY438152 EMBL:AY438153 EMBL:AY438154 EMBL:AY438155 EMBL:AY438156 EMBL:AY438157 EMBL:AY438158 EMBL:AY438159 EMBL:AY438160 EMBL:AY438161 EMBL:AY438162 EMBL:AY438163 EMBL:AY438164 EMBL:AY438165 EMBL:AY438166 EMBL:AY438167 EMBL:AY438168 EMBL:AY438169 EMBL:AY438170 EMBL:AY438171 EMBL:AY438172 EMBL:AY438173 EMBL:AY438174 EMBL:AY438175 EMBL:AY438176 EMBL:AY438177 EMBL:AY438178 EMBL:AY438179 EMBL:AY438180 EMBL:AY438181 EMBL:AY438182 EMBL:AY438183 EMBL:AY438184 EMBL:AY438185 EMBL:AY438186 EMBL:AY438187 EMBL:AY438188 EMBL:AY438189 EMBL:AY438190 EMBL:AY438191 EMBL:AY438192 EMBL:AY438193 EMBL:AY438194 EMBL:AY438195 EMBL:AY438196 EMBL:AY438197 EMBL:AY438198 EMBL:AY438199 EMBL:AY438200 EMBL:AY438201 EMBL:AY438202 EMBL:BK004004 EMBL:BT003267 EMBL:AY061269 EMBL:X05140 PIR:A31246 PIR:A43564 PIR:S00670 PIR:S19087 RefSeq:NP_001247193.1 RefSeq:NP_477264.1 RefSeq:NP_732412.1 UniGene:Dm.7687 ProteinModelPortal:P10041 SMR:P10041 BioGrid:67310 DIP:DIP-22726N IntAct:P10041 MINT:MINT-773349 EnsemblMetazoa:FBtr0083739 EnsemblMetazoa:FBtr0083740 EnsemblMetazoa:FBtr0304658 GeneID:42313 KEGG:dme:Dmel_CG3619 FlyBase:FBgn0000463 InParanoid:P10041 OMA:LIVEAWH SignaLink:P10041 ChiTaRS:Dl GenomeRNAi:42313 NextBio:828182 PMAP-CutDB:P10041 Bgee:P10041 GO:GO:0048800 GO:GO:0042676 GO:GO:0035157 GO:GO:0035155 GO:GO:0007460 GO:GO:0045468 Uniprot:P10041)

HSP 1 Score: 48.9062 bits (115), Expect = 2.568e-6
Identity = 23/45 (51.11%), Postives = 28/45 (62.22%), Query Frame = 0
Query:   55 CNGRGEIICMRGWSNPDYLCEVPTCSKTCVHGKCVGPEMCACELG 99
            C+  GEIIC+ GW   DY C +P C+K C HG C  P  C C+LG
Sbjct:  209 CSETGEIICLTGWQG-DY-CHIPKCAKGCEHGHCDKPNQCVCQLG 251          
BLAST of EMLSAG00000010049 vs. C. finmarchicus
Match: gi|592857615|gb|GAXK01099947.1| (TSA: Calanus finmarchicus comp252426_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 53.9138 bits (128), Expect = 1.536e-8
Identity = 35/102 (34.31%), Postives = 46/102 (45.10%), Query Frame = 0
Query:    1 MLFLVFTIFLVSLFSSGTS-SNRFHQLSSGQIHTPVSKSAYACSAERLKETEKYICNGRGEIICMRGWSNPDYLCEVPTCSKTC--VHGKCVGPEMCACELG 99
            M  +      V LF +G +     H+          S  A ACS+  L+  ++YIC   G+I C+ GW     LC+VP C   C   HG CV P  C C LG
Sbjct: 1627 MNLVFLAGAFVVLFHTGNAIPKELHRYGR-------SWEAEACSSRNLRNQDRYICTHDGKIKCLDGWIGD--LCQVPRCGNECDPQHGYCVKPGECKCNLG 1905          

HSP 2 Score: 28.4906 bits (62), Expect = 3.451e+0
Identity = 18/47 (38.30%), Postives = 20/47 (42.55%), Query Frame = 0
Query:   55 CNGRGEIICMRGWSNPDYLCEVPTCSKTCVH--GKCVGPEMCACELG 99
            CN   E IC  GW+     C  P C+  C    G C  P  C C LG
Sbjct: 1243 CNKPLECICEEGWTG--IFCNQPVCAANCSKEFGTCYRPGECRCRLG 1377          

HSP 3 Score: 28.1054 bits (61), Expect = 5.272e+0
Identity = 16/42 (38.10%), Postives = 19/42 (45.24%), Query Frame = 0
Query:   60 EIICMRGWSNPDYLCEVPTCSKTCV--HGKCVGPEMCACELG 99
            E  C  GWS     C  P C + C   +G C GP  C C+ G
Sbjct: 1435 ECRCEDGWSG--MFCNTPECHQDCERNNGFCAGPGKCECKRG 1554          
BLAST of EMLSAG00000010049 vs. C. finmarchicus
Match: gi|592899750|gb|GAXK01058625.1| (TSA: Calanus finmarchicus comp588439_c0_seq4 transcribed RNA sequence)

HSP 1 Score: 46.595 bits (109), Expect = 1.840e-6
Identity = 35/121 (28.93%), Postives = 49/121 (40.50%), Query Frame = 0
Query:    1 MLFLVFTIFLVSLFSSGTSSNRFHQLSSGQIHTP-------VSKSAYACSAERLKETEKYICNGRGEIICMRGWS-------------NPDYLCEVPTCSKTC--VHGKCVGPEMCACELG 99
            M+F++   FLV   +S  S         G I +P             ACS   ++  ++Y C   G+I+C  GWS              P   C  P CS+ C  VHG C  P  C C++G
Sbjct:   29 MVFMIALPFLVWKTASQNSPK-------GSIDSPHITGGRHYWHWVSACSEWAVQSQDRYFCTMEGKIVCKEGWSWNMCSGPMCAYLETPATFCSKPKCSEGCDPVHGHCEVPNTCKCKVG 370          
BLAST of EMLSAG00000010049 vs. C. finmarchicus
Match: gi|592899751|gb|GAXK01058624.1| (TSA: Calanus finmarchicus comp588439_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 46.595 bits (109), Expect = 1.934e-6
Identity = 35/121 (28.93%), Postives = 49/121 (40.50%), Query Frame = 0
Query:    1 MLFLVFTIFLVSLFSSGTSSNRFHQLSSGQIHTP-------VSKSAYACSAERLKETEKYICNGRGEIICMRGWS-------------NPDYLCEVPTCSKTC--VHGKCVGPEMCACELG 99
            M+F++   FLV   +S  S         G I +P             ACS   ++  ++Y C   G+I+C  GWS              P   C  P CS+ C  VHG C  P  C C++G
Sbjct:   29 MVFMIALPFLVWKTASQNSPK-------GSIDSPHITGGRHYWHWVSACSEWAVQSQDRYFCTMEGKIVCKEGWSWNMCSGPMCAYLETPATFCSKPKCSEGCDPVHGHCEVPNTCKCKVG 370          
BLAST of EMLSAG00000010049 vs. C. finmarchicus
Match: gi|592757916|gb|GAXK01196497.1| (TSA: Calanus finmarchicus comp577923_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 40.4318 bits (93), Expect = 2.867e-4
Identity = 33/114 (28.95%), Postives = 46/114 (40.35%), Query Frame = 0
Query:    1 MLFLVFTIFLVSLFSSGTSSNRFHQLSSGQIHTPVSKSAYACSAERLKETEKYICNGRGEIICMRGWS-------------NPDYLCEVPTCSKTC--VHGKCVGPEMCACELG 99
            M F +F++    L SSG SS       +G  H        ACS   ++  ++Y C   G+I+C  GWS              P   C   +C+  C  V G C  P  C C+ G
Sbjct:  462 MSFGIFSVASQDLPSSGISSPHV----TGGRH--YWDWVAACSEWAVQSQDRYFCTLDGKIVCREGWSWNMCQGPMCAYLETPATFCSEASCAAGCDPVQGFCSTPNTCLCKTG 785          

HSP 2 Score: 33.4982 bits (75), Expect = 5.523e-2
Identity = 18/40 (45.00%), Postives = 21/40 (52.50%), Query Frame = 0
Query:   62 ICMRGWSNPDYLCEVPTCSKTCVH--GKCVGPEMCACELG 99
            +C  GW     LC+VP C   C H  G C  PE C C+LG
Sbjct:  267 VCNEGWMGD--LCDVPICKDGCCHKNGYCTEPEECLCKLG 380          
BLAST of EMLSAG00000010049 vs. C. finmarchicus
Match: gi|592840364|gb|GAXK01117180.1| (TSA: Calanus finmarchicus comp303495_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 35.4242 bits (80), Expect = 1.514e-2
Identity = 19/46 (41.30%), Postives = 23/46 (50.00%), Query Frame = 0
Query:   55 CNGRGEIICMRGWSNPDYLCEVPTCSKTCVH-GKCVGPEMCACELG 99
            C+  G  IC  GW  P   C VP CS  C++ G C  P +C C  G
Sbjct:  503 CDVNGGCICRPGWEGP--FCSVPVCSPQCMNGGACSAPGVCDCPAG 634          
BLAST of EMLSAG00000010049 vs. C. finmarchicus
Match: gi|592840365|gb|GAXK01117179.1| (TSA: Calanus finmarchicus comp303495_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 35.4242 bits (80), Expect = 1.519e-2
Identity = 19/46 (41.30%), Postives = 23/46 (50.00%), Query Frame = 0
Query:   55 CNGRGEIICMRGWSNPDYLCEVPTCSKTCVH-GKCVGPEMCACELG 99
            C+  G  IC  GW  P   C VP CS  C++ G C  P +C C  G
Sbjct:  503 CDVNGGCICRPGWEGP--FCSVPVCSPQCMNGGACSAPGVCDCPAG 634          
BLAST of EMLSAG00000010049 vs. C. finmarchicus
Match: gi|592755442|gb|GAXK01198971.1| (TSA: Calanus finmarchicus comp121942_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 35.4242 bits (80), Expect = 2.024e-2
Identity = 12/24 (50.00%), Postives = 18/24 (75.00%), Query Frame = 0
Query:   76 VPTCSKTCVHGKCVGPEMCACELG 99
            +P CS+ C+ G C+GP++C CE G
Sbjct:  727 IPVCSQPCIRGACIGPDICKCETG 798          
BLAST of EMLSAG00000010049 vs. C. finmarchicus
Match: gi|592755443|gb|GAXK01198970.1| (TSA: Calanus finmarchicus comp121942_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 35.4242 bits (80), Expect = 2.026e-2
Identity = 12/24 (50.00%), Postives = 18/24 (75.00%), Query Frame = 0
Query:   76 VPTCSKTCVHGKCVGPEMCACELG 99
            +P CS+ C+ G C+GP++C CE G
Sbjct:  727 IPVCSQPCIRGACIGPDICKCETG 798          
BLAST of EMLSAG00000010049 vs. C. finmarchicus
Match: gi|592757915|gb|GAXK01196498.1| (TSA: Calanus finmarchicus comp577923_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 34.2686 bits (77), Expect = 3.595e-2
Identity = 22/74 (29.73%), Postives = 31/74 (41.89%), Query Frame = 0
Query:   41 ACSAERLKETEKYICNGRGEIICMRGWS-------------NPDYLCEVPTCSKTC--VHGKCVGPEMCACELG 99
            ACS   ++  ++Y C   G+I+C  GWS              P   C   +C+  C  V G C  P  C C+ G
Sbjct:  462 ACSEWAVQSQDRYFCTLDGKIVCREGWSWNMCQGPMCAYLETPATFCSEASCAAGCDPVQGFCSTPNTCLCKTG 683          

HSP 2 Score: 32.7278 bits (73), Expect = 9.783e-2
Identity = 18/40 (45.00%), Postives = 21/40 (52.50%), Query Frame = 0
Query:   62 ICMRGWSNPDYLCEVPTCSKTCVH--GKCVGPEMCACELG 99
            +C  GW     LC+VP C   C H  G C  PE C C+LG
Sbjct:  267 VCNEGWMGD--LCDVPICKDGCCHKNGYCTEPEECLCKLG 380          
BLAST of EMLSAG00000010049 vs. C. finmarchicus
Match: gi|592751603|gb|GAXK01202810.1| (TSA: Calanus finmarchicus comp343572_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 33.8834 bits (76), Expect = 5.184e-2
Identity = 16/40 (40.00%), Postives = 22/40 (55.00%), Query Frame = 0
Query:   60 EIICMRGWSNPDYLCEVPTCSKTCVHGKCVGPEMCACELG 99
            + IC  G+   ++ C VPTC   C HG C  P  C+C+ G
Sbjct: 1183 KAICCPGYQEAEHKC-VPTCDPQCSHGACTAPFTCSCDSG 1299          
BLAST of EMLSAG00000010049 vs. L. salmonis peptides
Match: EMLSAP00000010049 (pep:novel supercontig:LSalAtl2s:LSalAtl2s662:125535:127843:-1 gene:EMLSAG00000010049 transcript:EMLSAT00000010049 description:"maker-LSalAtl2s662-augustus-gene-1.20")

HSP 1 Score: 206.453 bits (524), Expect = 7.362e-70
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0
Query:    1 MLFLVFTIFLVSLFSSGTSSNRFHQLSSGQIHTPVSKSAYACSAERLKETEKYICNGRGEIICMRGWSNPDYLCEVPTCSKTCVHGKCVGPEMCACELG 99
            MLFLVFTIFLVSLFSSGTSSNRFHQLSSGQIHTPVSKSAYACSAERLKETEKYICNGRGEIICMRGWSNPDYLCEVPTCSKTCVHGKCVGPEMCACELG
Sbjct:    1 MLFLVFTIFLVSLFSSGTSSNRFHQLSSGQIHTPVSKSAYACSAERLKETEKYICNGRGEIICMRGWSNPDYLCEVPTCSKTCVHGKCVGPEMCACELG 99          
BLAST of EMLSAG00000010049 vs. L. salmonis peptides
Match: EMLSAP00000002328 (pep:novel supercontig:LSalAtl2s:LSalAtl2s143:679982:683460:1 gene:EMLSAG00000002328 transcript:EMLSAT00000002328 description:"augustus_masked-LSalAtl2s143-processed-gene-6.1")

HSP 1 Score: 72.7886 bits (177), Expect = 5.105e-16
Identity = 41/103 (39.81%), Postives = 61/103 (59.22%), Query Frame = 0
Query:    1 MLFLVFTIFLVSLFSSGTSSNRFHQLSSGQIHTPVSK-SAYACSAERLKETEKYICNGRGEIICMRGWSNPDYLCEVPTCS---KTCVHGKCVGPEMCACELG 99
            M+FL   + +  L +   S+ R          TP+ K ++ AC AE L+ T++YIC+  G IIC+ GWSNP  LC VP C    + C++G+C+ P +CACE+G
Sbjct:    1 MIFLSTLLIIGILITPSKSTGRI---------TPLLKVNSTACIAENLRLTDRYICDSYGNIICVGGWSNPTTLCNVPVCDMNGQGCLNGECLYPNVCACEVG 94          
BLAST of EMLSAG00000010049 vs. L. salmonis peptides
Match: EMLSAP00000006009 (pep:novel supercontig:LSalAtl2s:LSalAtl2s326:244578:255604:-1 gene:EMLSAG00000006009 transcript:EMLSAT00000006009 description:"snap_masked-LSalAtl2s326-processed-gene-2.8")

HSP 1 Score: 68.5514 bits (166), Expect = 6.795e-16
Identity = 37/100 (37.00%), Postives = 50/100 (50.00%), Query Frame = 0
Query:    3 FLVFTIFLVSLFSSGTSSNRFHQLSSGQIHTPV-SKSAYACSAERLKETEKYICNGRGEIICMRGWSNPDYLCEVPTCSKTC--VHGKCVGPEMCACELG 99
            FLV + ++  +F        F         +P+ S++  AC A  +K    YIC   GEI+C+ GW N   LC  P CS+ C  VHGKC  P  C CE+G
Sbjct:   12 FLVLSTYMNFIFGMNFEFRSFE--------SPITSQAQIACQANNIKANGNYICTKFGEIVCLFGWKNESSLCSEPICSQKCDLVHGKCTAPNTCTCEVG 103          
BLAST of EMLSAG00000010049 vs. L. salmonis peptides
Match: EMLSAP00000007552 (pep:novel supercontig:LSalAtl2s:LSalAtl2s436:271825:290086:-1 gene:EMLSAG00000007552 transcript:EMLSAT00000007552 description:"maker-LSalAtl2s436-snap-gene-3.19")

HSP 1 Score: 69.707 bits (169), Expect = 4.671e-15
Identity = 32/77 (41.56%), Postives = 49/77 (63.64%), Query Frame = 0
Query:   26 LSSGQIHTPVSKSAYACSAERLKETEKYICNGRGEIICMRGWSNPDYLCEVPTCS---KTCVHGKCVGPEMCACELG 99
            L++G+I   +  +  AC AE L+ TE+YIC+  G +IC+ GW +P   C VPTC    + C++G CV P +C C++G
Sbjct:   39 LATGRIIPLLQINNPACIAENLRVTERYICDLNGNVICIGGWXDPTKFCSVPTCELNGRDCINGNCVLPNVCVCDVG 115          
BLAST of EMLSAG00000010049 vs. L. salmonis peptides
Match: EMLSAP00000005417 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2921:9665:13131:1 gene:EMLSAG00000005417 transcript:EMLSAT00000005417 description:"maker-LSalAtl2s2921-snap-gene-0.4")

HSP 1 Score: 64.6994 bits (156), Expect = 2.593e-13
Identity = 41/102 (40.20%), Postives = 59/102 (57.84%), Query Frame = 0
Query:    1 MLFLVFTIFLVSLFSSGTSSNRFHQLSSGQIHTPVSK-SAYACSAERLKETEKYICNGRGEIICMRGWSNPDYLCEVPTCSKT--CVHGKCVGPEMCACELG 99
            M   +  I LV+L      S   +  ++G+I TP+S+  A AC AE L+ T++YIC+  G +IC+ GWS P  LC  P C       +GKC+ P +CACE+G
Sbjct:    1 MRNFIVWISLVAL------SILPYIKATGRI-TPLSRPGATACLAENLRLTDRYICDSEGNVICVDGWSYPSKLCSEPICDMNGRGXNGKCIHPNVCACEVG 95          
BLAST of EMLSAG00000010049 vs. L. salmonis peptides
Match: EMLSAP00000001175 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1194:58259:63871:1 gene:EMLSAG00000001175 transcript:EMLSAT00000001175 description:"maker-LSalAtl2s1194-augustus-gene-0.2")

HSP 1 Score: 57.3806 bits (137), Expect = 9.111e-12
Identity = 27/70 (38.57%), Postives = 38/70 (54.29%), Query Frame = 0
Query:   37 KSAYACSAERLKETEKYICNGRGEIICMRGWSNPDYLCEVPTCS-------KTCVHGKCVGPEMCACELG 99
            K+   CS + ++    Y C+  G IIC+ G+ NPD LC  P+C        + CVHG C  P +C CE+G
Sbjct:   21 KALDPCSIDEMETLGHYRCDKIGNIICVNGYKNPDNLCNEPSCIAYNGKEFRDCVHGNCTSPGVCHCEIG 90          
BLAST of EMLSAG00000010049 vs. L. salmonis peptides
Match: EMLSAP00000010397 (pep:novel supercontig:LSalAtl2s:LSalAtl2s68:326217:339785:1 gene:EMLSAG00000010397 transcript:EMLSAT00000010397 description:"maker-LSalAtl2s68-snap-gene-3.35")

HSP 1 Score: 59.6918 bits (143), Expect = 1.080e-11
Identity = 25/53 (47.17%), Postives = 39/53 (73.58%), Query Frame = 0
Query:   50 TEKYICNGRGEIICMRGWSNPDYLCEVPTCS---KTCVHGKCVGPEMCACELG 99
            + KY C+  G +IC+ GWS P++LCE P CS   ++CV+G+C+ P +C+CE+G
Sbjct:   15 SNKYTCDSIGNVICLPGWSQPEHLCETPVCSIEGRSCVNGECIFPNVCSCEIG 67          
BLAST of EMLSAG00000010049 vs. L. salmonis peptides
Match: EMLSAP00000002488 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1484:7889:8243:1 gene:EMLSAG00000002488 transcript:EMLSAT00000002488 description:"maker-LSalAtl2s1484-snap-gene-0.15")

HSP 1 Score: 55.0694 bits (131), Expect = 3.120e-11
Identity = 30/77 (38.96%), Postives = 45/77 (58.44%), Query Frame = 0
Query:    5 VFTIFLVSLFSSGTSSNRFHQLSSGQIHTPVSK-SAYACSAERLKETEKYICNGRGEIICMRGWSNPDYLCEVPTCS 80
            + +I + ++FS  T         +G+I TP+S+  A AC AE L+ T++YIC+  G +IC+ GWS P  LC  P C 
Sbjct:    6 ILSIVIFTIFSLPTIKG------TGRI-TPLSRPGATACLAENLRLTDRYICDSEGNVICVDGWSYPSKLCSEPICD 75          
BLAST of EMLSAG00000010049 vs. L. salmonis peptides
Match: EMLSAP00000009752 (pep:novel supercontig:LSalAtl2s:LSalAtl2s62:286175:292408:1 gene:EMLSAG00000009752 transcript:EMLSAT00000009752 description:"maker-LSalAtl2s62-snap-gene-3.20")

HSP 1 Score: 54.6842 bits (130), Expect = 4.785e-10
Identity = 32/103 (31.07%), Postives = 51/103 (49.51%), Query Frame = 0
Query:    2 LFLVFTIFLVSLFSSGTSSNRFHQLSSGQIHTPV-SKSAYACSAERLKETEKYICNGRGEIICMRGWSNPDYLCEVPTCSKTC----VHGKCVGPEMCACELG 99
            L+L + IF   +   G +   ++        TP+ +++   CSAE ++   KY C+    I C+ GW +   LCE P C + C      GKC+ P +CAC +G
Sbjct:    5 LYLSYYIFFSLIIKQGIAYRHYYL-------TPLLTRNNVLCSAEVVQNQGKYFCDQDLNIRCVPGWRSEKSLCEFPICPEECNADKRQGKCILPSICACAVG 100          
BLAST of EMLSAG00000010049 vs. SwissProt
Match: gi|12643976|sp|P10041.2|DL_DROME (RecName: Full=Neurogenic locus protein delta; Flags: Precursor)

HSP 1 Score: 48.9062 bits (115), Expect = 7.142e-7
Identity = 23/45 (51.11%), Postives = 28/45 (62.22%), Query Frame = 0
Query:   55 CNGRGEIICMRGWSNPDYLCEVPTCSKTCVHGKCVGPEMCACELG 99
            C+  GEIIC+ GW   DY C +P C+K C HG C  P  C C+LG
Sbjct:  209 CSETGEIICLTGWQG-DY-CHIPKCAKGCEHGHCDKPNQCVCQLG 251          
BLAST of EMLSAG00000010049 vs. Select Arthropod Genomes
Match: AAF47984.1 (C901 [Drosophila melanogaster])

HSP 1 Score: 49.6766 bits (117), Expect = 1.802e-7
Identity = 27/100 (27.00%), Postives = 45/100 (45.00%), Query Frame = 0
Query:    2 LFLVFTIFLVSLFSSGTSSNRFHQLSSGQIHTPVSKSAYACSAERLKETEKYICNGRGEIICMRGWSNPDYLCEVPTCSKTC--VHGKCVGPEMCACELG 99
            L LV  I  + L         F    S   + P+ K      +++ ++   Y+C+ +G+  C+ GW     LC+VP C + C  ++G C  P  C C +G
Sbjct:    9 LLLVTAITALKLEEMNAYRRNFDARQSSNSNIPLWKQRACEKSQKQRQNAHYVCDEKGDFKCLPGWQG--DLCQVPMCRRGCDPMNGYCQRPGECRCRIG 106          
BLAST of EMLSAG00000010049 vs. Select Arthropod Genomes
Match: AFH06511.1 (delta, isoform C [Drosophila melanogaster])

HSP 1 Score: 48.9062 bits (115), Expect = 3.461e-7
Identity = 23/45 (51.11%), Postives = 28/45 (62.22%), Query Frame = 0
Query:   55 CNGRGEIICMRGWSNPDYLCEVPTCSKTCVHGKCVGPEMCACELG 99
            C+  GEIIC+ GW   DY C +P C+K C HG C  P  C C+LG
Sbjct:  209 CSETGEIICLTGWQG-DY-CHIPKCAKGCEHGHCDKPNQCVCQLG 251          
BLAST of EMLSAG00000010049 vs. Select Arthropod Genomes
Match: AAN13798.1 (delta, isoform B [Drosophila melanogaster])

HSP 1 Score: 48.9062 bits (115), Expect = 3.461e-7
Identity = 23/45 (51.11%), Postives = 28/45 (62.22%), Query Frame = 0
Query:   55 CNGRGEIICMRGWSNPDYLCEVPTCSKTCVHGKCVGPEMCACELG 99
            C+  GEIIC+ GW   DY C +P C+K C HG C  P  C C+LG
Sbjct:  209 CSETGEIICLTGWQG-DY-CHIPKCAKGCEHGHCDKPNQCVCQLG 251          
BLAST of EMLSAG00000010049 vs. Select Arthropod Genomes
Match: AAF55657.1 (delta, isoform A [Drosophila melanogaster])

HSP 1 Score: 48.9062 bits (115), Expect = 3.461e-7
Identity = 23/45 (51.11%), Postives = 28/45 (62.22%), Query Frame = 0
Query:   55 CNGRGEIICMRGWSNPDYLCEVPTCSKTCVHGKCVGPEMCACELG 99
            C+  GEIIC+ GW   DY C +P C+K C HG C  P  C C+LG
Sbjct:  209 CSETGEIICLTGWQG-DY-CHIPKCAKGCEHGHCDKPNQCVCQLG 251          
BLAST of EMLSAG00000010049 vs. nr
Match: gi|1098677601|ref|XP_018798701.1| (PREDICTED: laminin subunit gamma-1 [Bactrocera latifrons] >gi|1098677605|ref|XP_018798702.1| PREDICTED: laminin subunit gamma-1 [Bactrocera latifrons])

HSP 1 Score: 56.225 bits (134), Expect = 3.691e-7
Identity = 30/101 (29.70%), Postives = 48/101 (47.52%), Query Frame = 0
Query:    1 MLFLVFTIFLVSLFSSGTSSNRFHQLSSGQIHTPVSKSAYACSAERLKETEKYICNGRGEIICMRGWSNPDYLCEVPTCSKTC--VHGKCVGPEMCACELG 99
            +++L + +   +L  + T   R + L  G    P  K       +R K    YIC+ +G + C+ GW     LC+VP C K C  ++G C  P+ C C +G
Sbjct:    6 LIYLAYFLLAPTLLPAVTYHRRNYDLRYGNSDVPQWKQRACQKTQREKINLHYICDEKGNVKCLPGWQG--DLCQVPQCRKGCDPMNGYCQRPDECRCRIG 104          
BLAST of EMLSAG00000010049 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold439_size171548-snap-gene-0.22 (protein:Tk02654 transcript:maker-scaffold439_size171548-snap-gene-0.22-mRNA-1 annotation:"delta-like protein a")

HSP 1 Score: 74.3294 bits (181), Expect = 2.941e-17
Identity = 42/106 (39.62%), Postives = 58/106 (54.72%), Query Frame = 0
Query:    3 FLVFTIFLVSLFSSGTSSNRFHQLSSGQIHTPVSKSAYACSAERLKETEKYICNGRGEIICMRGWSNPDYLCEVPTCS---------KTCVHGKCVGPEMCACELG 99
            F +FT++L    S G+   +   +S  Q  TP+      C AE L+ET+ YIC+   ++IC+ GWS P  LC  P C          KTC HG+CV P +CACE+G
Sbjct:  307 FNMFTLYLA--ISIGSQLVQGGPMSGMQ--TPLIHDDMPCLAENLRETDHYICSDENKMICLSGWSEPSNLCRTPICHFRTANEANYKTCDHGECVRPNVCACEVG 408          
BLAST of EMLSAG00000010049 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold2342_size16862-snap-gene-0.3 (protein:Tk12307 transcript:maker-scaffold2342_size16862-snap-gene-0.3-mRNA-1 annotation:"protein jagged-1")

HSP 1 Score: 65.0846 bits (157), Expect = 3.821e-14
Identity = 33/92 (35.87%), Postives = 51/92 (55.43%), Query Frame = 0
Query:   23 FHQLSS----GQIHTPVSKSAYACSAERLKETEKYICNGRGEIICMRGWSNPD--------YLCEVPTCS---KTCVHGKCVGPEMCACELG 99
            FH +S+    G   TP+    + C AE LKE+ +Y+C+    +IC+ GW+ P+          C +P C    +TC HG+CV P +CAC++G
Sbjct:   53 FHGISANFLRGGFFTPLKNDEHPCVAENLKESHRYLCDDDANVICLSGWTEPEDKELHDLRNPCPLPVCDYNGETCQHGECVRPNVCACKVG 144          
BLAST of EMLSAG00000010049 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold61_size441589-processed-gene-3.14 (protein:Tk06317 transcript:snap_masked-scaffold61_size441589-processed-gene-3.14-mRNA-1 annotation:"multidrug resistance-associated protein 1-like")

HSP 1 Score: 61.2326 bits (147), Expect = 1.071e-12
Identity = 31/85 (36.47%), Postives = 47/85 (55.29%), Query Frame = 0
Query:   29 GQIHTPVSKSAYACSAERLKETEKYICNGRGEIICMRGW-----------SNPDYLCEVPTCS---KTCVHGKCVGPEMCACELG 99
            G + TP+      C+AE L+E+ +YIC+    +IC+ GW            NP   C +P C    +TC HG+CV P++CAC++G
Sbjct:  229 GLLLTPLRIRELPCAAESLRESHRYICDDEANVICLSGWMEEPNVADRDIRNP---CPIPICDHQGETCSHGECVRPDVCACDVG 310          
BLAST of EMLSAG00000010049 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold645_size120276-snap-gene-0.27 (protein:Tk11116 transcript:maker-scaffold645_size120276-snap-gene-0.27-mRNA-1 annotation:"hypothetical protein DAPPUDRAFT_323318")

HSP 1 Score: 57.7658 bits (138), Expect = 1.582e-11
Identity = 28/95 (29.47%), Postives = 43/95 (45.26%), Query Frame = 0
Query:    5 VFTIFLVSLFSSGTSSNRFHQLSSGQIHTPVSKSAYACSAERLKETEKYICNGRGEIICMRGWSNPDYLCEVPTCSKTCVHGKCVGPEMCACELG 99
            +  +  ++L S      +   L +G   T       AC AE LK    Y+C   G +IC+ GW++    C  P C   C++G C  P  C C++G
Sbjct:   15 ILLLGALTLVSQSVEGRKPLTLINGWYKT-------ACIAENLKSNNNYMCTRNGTMICLPGWTDEYKYCNTPICDPVCINGNCTAPNTCTCDVG 102          
BLAST of EMLSAG00000010049 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold411_size179879-snap-gene-0.33 (protein:Tk06323 transcript:maker-scaffold411_size179879-snap-gene-0.33-mRNA-1 annotation:"protein jagged-1-like")

HSP 1 Score: 57.7658 bits (138), Expect = 1.775e-11
Identity = 24/59 (40.68%), Postives = 33/59 (55.93%), Query Frame = 0
Query:   41 ACSAERLKETEKYICNGRGEIICMRGWSNPDYLCEVPTCSKTCVHGKCVGPEMCACELG 99
            AC AE LK    Y+C   G +IC+ GW++    C  P C   C++G C  P +C CE+G
Sbjct:   42 ACIAENLKGNRNYMCARNGTMICLPGWTDEYKYCSTPICDPVCINGNCTAPNVCTCEVG 100          

HSP 2 Score: 57.7658 bits (138), Expect = 1.775e-11
Identity = 24/59 (40.68%), Postives = 33/59 (55.93%), Query Frame = 0
Query:   41 ACSAERLKETEKYICNGRGEIICMRGWSNPDYLCEVPTCSKTCVHGKCVGPEMCACELG 99
            AC AE LK    Y+C   G +IC+ GW++    C  P C   C++G C  P +C CE+G
Sbjct:  189 ACIAENLKGNRNYMCARNGTMICLPGWTDEYKYCSTPICDPVCINGNCTAPNVCTCEVG 247          
BLAST of EMLSAG00000010049 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold275_size226830-snap-gene-1.26 (protein:Tk00636 transcript:maker-scaffold275_size226830-snap-gene-1.26-mRNA-1 annotation:"protein jagged-1")

HSP 1 Score: 55.8398 bits (133), Expect = 8.012e-11
Identity = 31/85 (36.47%), Postives = 46/85 (54.12%), Query Frame = 0
Query:   29 GQIHTPVSKSAYACSAERLKETEKYICNGRGEIICMRGW-----------SNPDYLCEVPTCS---KTCVHGKCVGPEMCACELG 99
            G + TP+      C AE L+E+ +YIC+    +IC+ GW            NP   C +P C    +TC HG+CV P++CAC++G
Sbjct:   22 GLLLTPLRIEELPCVAENLRESYRYICDDEANVICLSGWMEKPNGDDRDIRNP---CPIPICDYQGETCSHGECVRPDVCACDVG 103          
BLAST of EMLSAG00000010049 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold531_size145796-snap-gene-0.27 (protein:Tk12605 transcript:maker-scaffold531_size145796-snap-gene-0.27-mRNA-1 annotation:"unknown")

HSP 1 Score: 47.7506 bits (112), Expect = 4.983e-8
Identity = 26/80 (32.50%), Postives = 38/80 (47.50%), Query Frame = 0
Query:   35 VSKSAYACSAERLKETEKYICNGRGEIICMRGWSNPD---------YL---CEVPTC---SKTCVHGKCVGPEMCACELG 99
            V +  + C+A+ L+ET +Y C+  G +IC  GW  P          YL   C  P C    + C  G C  P +C C++G
Sbjct:   26 VDEVDHPCAADNLRETHRYFCSQDGTVICREGWREPQASTLRFGSYYLLGPCAEPICEYQGRGCAQGHCAKPGVCVCDIG 105          
BLAST of EMLSAG00000010049 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold645_size120276-snap-gene-0.36 (protein:Tk11125 transcript:maker-scaffold645_size120276-snap-gene-0.36-mRNA-1 annotation:"neurogenic locus protein delta")

HSP 1 Score: 46.595 bits (109), Expect = 1.168e-7
Identity = 24/61 (39.34%), Postives = 32/61 (52.46%), Query Frame = 0
Query:   41 ACSAERLKETEKYICNGRGEIICMRGWSNPDYLCEVPTCSKTCV--HGKCVGPEMCACELG 99
             C A+ L E   YIC    +I+C+ GW+NP+  C  P C + C   HG C  P +C C  G
Sbjct:   65 PCQADVLYEQFNYICVNN-QIMCLPGWTNPENYCRDPACPEGCDKNHGSCTKPNVCHCRAG 124          
The following BLAST results are available for this feature:
BLAST of EMLSAG00000010049 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 2
Match NameE-valueIdentityDescription
-1.235e-627.00symbol:C901 "C901" species:7227 "Drosophila melano... [more]
-2.568e-651.11symbol:Dl "Delta" species:7227 "Drosophila melanog... [more]
back to top
BLAST of EMLSAG00000010049 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25
Match NameE-valueIdentityDescription
gi|592857615|gb|GAXK01099947.1|1.536e-834.31TSA: Calanus finmarchicus comp252426_c0_seq1 trans... [more]
gi|592899750|gb|GAXK01058625.1|1.840e-628.93TSA: Calanus finmarchicus comp588439_c0_seq4 trans... [more]
gi|592899751|gb|GAXK01058624.1|1.934e-628.93TSA: Calanus finmarchicus comp588439_c0_seq3 trans... [more]
gi|592757916|gb|GAXK01196497.1|2.867e-428.95TSA: Calanus finmarchicus comp577923_c0_seq1 trans... [more]
gi|592840364|gb|GAXK01117180.1|1.514e-241.30TSA: Calanus finmarchicus comp303495_c0_seq2 trans... [more]
gi|592840365|gb|GAXK01117179.1|1.519e-241.30TSA: Calanus finmarchicus comp303495_c0_seq1 trans... [more]
gi|592755442|gb|GAXK01198971.1|2.024e-250.00TSA: Calanus finmarchicus comp121942_c1_seq2 trans... [more]
gi|592755443|gb|GAXK01198970.1|2.026e-250.00TSA: Calanus finmarchicus comp121942_c1_seq1 trans... [more]
gi|592757915|gb|GAXK01196498.1|3.595e-229.73TSA: Calanus finmarchicus comp577923_c0_seq2 trans... [more]
gi|592751603|gb|GAXK01202810.1|5.184e-240.00TSA: Calanus finmarchicus comp343572_c0_seq2 trans... [more]

Pages

back to top
BLAST of EMLSAG00000010049 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 9
Match NameE-valueIdentityDescription
EMLSAP000000100497.362e-70100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s662:12553... [more]
EMLSAP000000023285.105e-1639.81pep:novel supercontig:LSalAtl2s:LSalAtl2s143:67998... [more]
EMLSAP000000060096.795e-1637.00pep:novel supercontig:LSalAtl2s:LSalAtl2s326:24457... [more]
EMLSAP000000075524.671e-1541.56pep:novel supercontig:LSalAtl2s:LSalAtl2s436:27182... [more]
EMLSAP000000054172.593e-1340.20pep:novel supercontig:LSalAtl2s:LSalAtl2s2921:9665... [more]
EMLSAP000000011759.111e-1238.57pep:novel supercontig:LSalAtl2s:LSalAtl2s1194:5825... [more]
EMLSAP000000103971.080e-1147.17pep:novel supercontig:LSalAtl2s:LSalAtl2s68:326217... [more]
EMLSAP000000024883.120e-1138.96pep:novel supercontig:LSalAtl2s:LSalAtl2s1484:7889... [more]
EMLSAP000000097524.785e-1031.07pep:novel supercontig:LSalAtl2s:LSalAtl2s62:286175... [more]
back to top
BLAST of EMLSAG00000010049 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
gi|12643976|sp|P10041.2|DL_DROME7.142e-751.11RecName: Full=Neurogenic locus protein delta; Flag... [more]
back to top
BLAST of EMLSAG00000010049 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 4
Match NameE-valueIdentityDescription
AAF47984.11.802e-727.00C901 [Drosophila melanogaster][more]
AFH06511.13.461e-751.11delta, isoform C [Drosophila melanogaster][more]
AAN13798.13.461e-751.11delta, isoform B [Drosophila melanogaster][more]
AAF55657.13.461e-751.11delta, isoform A [Drosophila melanogaster][more]
back to top
BLAST of EMLSAG00000010049 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 1
Match NameE-valueIdentityDescription
gi|1098677601|ref|XP_018798701.1|3.691e-729.70PREDICTED: laminin subunit gamma-1 [Bactrocera lat... [more]
back to top
BLAST of EMLSAG00000010049 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 8
Match NameE-valueIdentityDescription
maker-scaffold439_size171548-snap-gene-0.222.941e-1739.62protein:Tk02654 transcript:maker-scaffold439_size1... [more]
maker-scaffold2342_size16862-snap-gene-0.33.821e-1435.87protein:Tk12307 transcript:maker-scaffold2342_size... [more]
snap_masked-scaffold61_size441589-processed-gene-3.141.071e-1236.47protein:Tk06317 transcript:snap_masked-scaffold61_... [more]
maker-scaffold645_size120276-snap-gene-0.271.582e-1129.47protein:Tk11116 transcript:maker-scaffold645_size1... [more]
maker-scaffold411_size179879-snap-gene-0.331.775e-1140.68protein:Tk06323 transcript:maker-scaffold411_size1... [more]
maker-scaffold275_size226830-snap-gene-1.268.012e-1136.47protein:Tk00636 transcript:maker-scaffold275_size2... [more]
maker-scaffold531_size145796-snap-gene-0.274.983e-832.50protein:Tk12605 transcript:maker-scaffold531_size1... [more]
maker-scaffold645_size120276-snap-gene-0.361.168e-739.34protein:Tk11125 transcript:maker-scaffold645_size1... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s662supercontigLSalAtl2s662:125535..127843 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s662-augustus-gene-1.20
Biotypeprotein_coding
EvidenceIEA
NoteNeurogenic locus protein delta
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000010049 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000010049EMLSAT00000010049-705896Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s662:125535..127843-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000010049-692815 ID=EMLSAG00000010049-692815|Name=EMLSAG00000010049|organism=Lepeophtheirus salmonis|type=gene|length=2309bp|location=Sequence derived from alignment at LSalAtl2s662:125535..127843- (Lepeophtheirus salmonis)
ATGTTGTTTTTAGTATTTACAATTTTCTTAGTAAGTTTATTTTCAAGTGG AACGAGTAGCAACAGGTTCCATCAGCTTTCTTCCGGACAAATACATACTC CAGTTAGCAAAAGTGCTTATGCCTGTTCTGCAGAACGATTGAAAGAAACC GAAAAATATATTTGTAATGGCCGAGGTGAAATCATTTGTATGAGAGGTTG GTCAAATCCAGATTACTTGTGTGAAGTTCCAACTTGTTCGAAAACATGTG TTCATGGAAAGTGCGTTGGACCTGAGATGTGTGCCTGCGAACTAGGATGG TAATAGGATATACGATCCAATATATCTAATCAGTAGGAGAATACGCGGAT TTTCTTTTCATTTTTAAGGTCTGGAGAGAAATGTGACGAATGCATCAAAT TACCACATTGTAAATATGGAACATGTGATACACCCTTTGAATGCAAATGT GAAACAAATTGGACTGGACCCTTTTGTCAACTACGTATGATTTTAAAATA ACATTTAGGGCTCCTTGTCACTAGTATTGAGACCGAGGCTGAATTTCTAT TCTCTTTTCTTTCTTAATTTATTTTTTCTAGACTGATGTTTCGGTCCAGA CCGAATTTTAGAACATTGAACGAAATTCAATTCATAGATTAAAATTTCTT TTTATAATAAAAATGTCGCAAACAAATTCTTCCCCCATCAAATTTCATTT CTAAAAAAAATAACGTGGAACCAGATCAAGCACAATTTATTTGTAAACCG AATTTTACTATGAAATTCATCCAGTCCAAAATTGGACTGAATTATTTAAA CATATAACGGTATCATATTAGTTTATAATTTTCAGACAGAAACCAACAAC TAGTTTTTACTTCCTTAGTTGTCACTTTTTAATTTCGGGACGATCATAAA GATTCAATATATTTCGATCTACAAAATCGTTTCTTTTGAAAGTAGAAGAT TTCTGAAAGAGCAGCAACTGATAATTTTTATTTAAGGAAATTATAAGAAA GAAGAAATTTCGAAACATGTCATTCACTGATGTCCTGCCAACATTTCCTT CTTCTTAGTGATTCCCCTCCCATAAGCAATTAGCTTTTGTTTTTATGCTT TCAATAAATAGACACAAGCTTTATCATAGATGTACAGATTGCATATTCAT ATTGTCATAGTTTTTTTAATCAATTCTAGGGACATAATTTTGTGAGTACT CACCAAAATGTGATATTCAAATCTTACATATTTTTTCTTTAAAAAAAGGA GAGGTTTTATGGCAACGAAAGTTAGTAATCAGGTGCAATTAATTTATCTC TGTCAATAAGTTAAGTATGTGGTCACAAAAATTCCTAGTTAAAAAAAAAG TTTGATGGAAAGAAAATACACAGTCTCTACCAAATTATATTCCATTTTGG AACTATCCACAGTACAAAAATCTTCAATTGATTCTACAATTGAAGATCAT CAATTGTAGTGATTCTACAATTGATGATCTTCAAACTTTAGTAACTCTAC CTTACACAAATAAGAGAGTTCATGTCAATGAAAATAAATGGTTTATATTA AAAGCAGGAAACTCTGGAAACACGTTCGTCACTATTGTGTTTGTTTCTAG TAACATTTAGCCTTTAAAAGATGCTATATGTGCCGTTACAAAACCTCCCA TTTTGTAATAGGAGAGTTATTAAAGTAATAAGATTAAATATAGTGTCCAG GCTCCCCTTGAAGTTCTGATCCAAGGATAGAACCAAAATTACGGCGAAAG CGTCGCGCTTTGTGAAAATGAACCTTACAATCAGAATAGTAACTTCTCAT ATTTTAATATTTTTTCCAGCTGCATGTTCTGAGAANTTGCTTACAACATG GATACTGTGTTTCACCTCATCAATGCCAGTAAGMATGGGATACACACTTA TGATATTTGGGGTGATTACATGAAATTATGATGATCTTTTTATTTTTAAA GATGTATCCCCGGATGGWAAGGAAAGGAGTGTGATGTGTGTACAAAAAGA GAGACTTGCAAACATGGATTTTGCATCCAAGATCCATCTGAGTGTTTATG TGAGGAGGGTTTTACTGGTACAAACTGTGATGCTCCTATGTGTAAAAAGG GTTGTAAAAATGGAAATTGCTCTGCACCTGATGAATGTAATTGTTCATTT GGATGGATCGGAGAAATATGCGACACATGTCTACCAGACTTTACTAAAGG ATGTACAAAATGTATAAAGAACGAACCATTCACTTGTGGGGATGGCTTAG AAAATGAAAAAAATATCTGGTCCGACAGTATAATCAATGATTCAATTGTT CCATCATAA
back to top
Add to Basket