EMLSAG00000010314, EMLSAG00000010314-693080 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000010314 vs. C. finmarchicus
Match: gi|592762160|gb|GAXK01192253.1| (TSA: Calanus finmarchicus comp911643_c0_seq2 transcribed RNA sequence) HSP 1 Score: 31.187 bits (69), Expect = 5.769e+0 Identity = 18/57 (31.58%), Postives = 34/57 (59.65%), Query Frame = 0 Query: 10 GNKENSNFANGDNLNSPNQSMDQQSTNGQNENISNGNDINSNMPNGDNLNNQNESMD 66 GN EN F ++S S D+++ +G++EN+ N +D + GD++N+++E D Sbjct: 39 GNDENKKF-----VDSEGDSYDEKNEDGKDENVENSDDNDGEHQIGDDINSKDEKSD 194
BLAST of EMLSAG00000010314 vs. C. finmarchicus
Match: gi|592762161|gb|GAXK01192252.1| (TSA: Calanus finmarchicus comp911643_c0_seq1 transcribed RNA sequence) HSP 1 Score: 30.8018 bits (68), Expect = 6.309e+0 Identity = 18/57 (31.58%), Postives = 34/57 (59.65%), Query Frame = 0 Query: 10 GNKENSNFANGDNLNSPNQSMDQQSTNGQNENISNGNDINSNMPNGDNLNNQNESMD 66 GN EN F ++S S D+++ +G++EN+ N +D + GD++N+++E D Sbjct: 39 GNDENKKF-----VDSEGDSYDEKNEDGKDENVENSDDNDGEHQIGDDINSKDEKSD 194
BLAST of EMLSAG00000010314 vs. L. salmonis peptides
Match: EMLSAP00000010314 (pep:novel supercontig:LSalAtl2s:LSalAtl2s6833:1:1974:1 gene:EMLSAG00000010314 transcript:EMLSAT00000010314 description:"augustus_masked-LSalAtl2s6833-processed-gene-0.1") HSP 1 Score: 701.819 bits (1810), Expect = 0.000e+0 Identity = 377/377 (100.00%), Postives = 377/377 (100.00%), Query Frame = 0 Query: 1 MGQSENPSNGNKENSNFANGDNLNSPNQSMDQQSTNGQNENISNGNDINSNMPNGDNLNNQNESMDQLNSNGQSENTSNGNKGNSNFPNGGNPSIGPINNSEISQKQNSLNNAKGNSSPSFGDNVQSGTNSLFRRQTNNFPENPLSSTGVNLNIQNSLLSQSNSGLYRSMSPLTNSEISQKQNSVNNAAGFSSPSFGSNVQSATNGLYRSHTNYPGTPLSSTGINVNNQNDLISQSNSPSYRSIGINVNNQNDLISQSNSPSYRSIGPIDNSEISQKQNSVNNAGGYSSPSFGSNVQSATNGLYRSQTNNYPESPMSSTGVNLNNKNSLVSQSNSPSYRSHGPVANLEVSQNQNSLNNAGGYSSPSFGSNVQSATNG 377 MGQSENPSNGNKENSNFANGDNLNSPNQSMDQQSTNGQNENISNGNDINSNMPNGDNLNNQNESMDQLNSNGQSENTSNGNKGNSNFPNGGNPSIGPINNSEISQKQNSLNNAKGNSSPSFGDNVQSGTNSLFRRQTNNFPENPLSSTGVNLNIQNSLLSQSNSGLYRSMSPLTNSEISQKQNSVNNAAGFSSPSFGSNVQSATNGLYRSHTNYPGTPLSSTGINVNNQNDLISQSNSPSYRSIGINVNNQNDLISQSNSPSYRSIGPIDNSEISQKQNSVNNAGGYSSPSFGSNVQSATNGLYRSQTNNYPESPMSSTGVNLNNKNSLVSQSNSPSYRSHGPVANLEVSQNQNSLNNAGGYSSPSFGSNVQSATNG Sbjct: 1 MGQSENPSNGNKENSNFANGDNLNSPNQSMDQQSTNGQNENISNGNDINSNMPNGDNLNNQNESMDQLNSNGQSENTSNGNKGNSNFPNGGNPSIGPINNSEISQKQNSLNNAKGNSSPSFGDNVQSGTNSLFRRQTNNFPENPLSSTGVNLNIQNSLLSQSNSGLYRSMSPLTNSEISQKQNSVNNAAGFSSPSFGSNVQSATNGLYRSHTNYPGTPLSSTGINVNNQNDLISQSNSPSYRSIGINVNNQNDLISQSNSPSYRSIGPIDNSEISQKQNSVNNAGGYSSPSFGSNVQSATNGLYRSQTNNYPESPMSSTGVNLNNKNSLVSQSNSPSYRSHGPVANLEVSQNQNSLNNAGGYSSPSFGSNVQSATNG 377
BLAST of EMLSAG00000010314 vs. L. salmonis peptides
Match: EMLSAP00000010553 (pep:novel supercontig:LSalAtl2s:LSalAtl2s7003:1391:3379:1 gene:EMLSAG00000010553 transcript:EMLSAT00000010553 description:"maker-LSalAtl2s7003-snap-gene-0.2") HSP 1 Score: 187.963 bits (476), Expect = 2.027e-57 Identity = 113/176 (64.20%), Postives = 129/176 (73.30%), Query Frame = 0 Query: 141 PENPLSSTGVNLNIQNSLLSQSNSGLYRSMSPLTNSEISQKQNSVNNAAGFSSPSFGSNVQSATNGLYRSHTNY-PGTPLSSTGINVNNQNDLISQSNSPSYRSIGINVNNQNDLISQSNSPSYRSIGPIDNSEISQKQNSVNNAGGYSSPSFGSNVQSATNGLYRSQTNNYPESP 315 PE+ + + + +++LL NS YRS+ P+ NSEISQKQNSVN+A G+SSPSFGSNVQSA NGLYRS TNY P P +STGINVNN+ NDL+SQSNSPSYRSIGP DNSEI QKQNSVNNAGGYSSPSFGSNVQSATNGLYRSQTNN+P +P Sbjct: 42 PESDCTFSAGHKLYKHNLLYPLNSP-YRSIRPIDNSEISQKQNSVNSAGGYSSPSFGSNVQSAANGLYRSRTNYSPVNPSTSTGINVNNR----------------------NDLVSQSNSPSYRSIGPTDNSEILQKQNSVNNAGGYSSPSFGSNVQSATNGLYRSQTNNFPGNP 194 HSP 2 Score: 176.407 bits (446), Expect = 5.771e-53 Identity = 97/127 (76.38%), Postives = 110/127 (86.61%), Query Frame = 0 Query: 251 QNDLISQSNSPSYRSIGPIDNSEISQKQNSVNNAGGYSSPSFGSNVQSATNGLYRSQTNNYPESPMSSTGVNLNNKNSLVSQSNSPSYRSHGPVANLEVSQNQNSLNNAGGYSSPSFGSNVQSATNG 377 +++L+ NSP YRSI PIDNSEISQKQNSVN+AGGYSSPSFGSNVQSA NGLYRS+TN P +P +STG+N+NN+N LVSQSNSPSYRS GP N E+ Q QNS+NNAGGYSSPSFGSNVQSATNG Sbjct: 56 KHNLLYPLNSP-YRSIRPIDNSEISQKQNSVNSAGGYSSPSFGSNVQSAANGLYRSRTNYSPVNPSTSTGINVNNRNDLVSQSNSPSYRSIGPTDNSEILQKQNSVNNAGGYSSPSFGSNVQSATNG 181 HSP 3 Score: 157.147 bits (396), Expect = 1.040e-45 Identity = 89/126 (70.63%), Postives = 102/126 (80.95%), Query Frame = 0 Query: 94 SIGPINNSEISQKQNSLNNAKGNSSPSFGDNVQSGTNSLFRRQTNNFPENPLSSTGVNLNIQNSLLSQSNSGLYRSMSPLTNSEISQKQNSVNNAAGFSSPSFGSNVQSATNGLYRSHT-NYPGTP 218 SI PI+NSEISQKQNS+N+A G SSPSFG NVQS N L+R +TN P NP +STG+N+N +N L+SQSNS YRS+ P NSEI QKQNSVNNA G+SSPSFGSNVQSATNGLYRS T N+PG P Sbjct: 69 SIRPIDNSEISQKQNSVNSAGGYSSPSFGSNVQSAANGLYRSRTNYSPVNPSTSTGINVNNRNDLVSQSNSPSYRSIGPTDNSEILQKQNSVNNAGGYSSPSFGSNVQSATNGLYRSQTNNFPGNP 194 HSP 4 Score: 78.5666 bits (192), Expect = 3.514e-17 Identity = 52/113 (46.02%), Postives = 65/113 (57.52%), Query Frame = 0 Query: 32 QQSTNGQNENISNGNDINSNMPNGDNLNNQNESMDQLNSNGQSENTSNGNKGNSNFPNGGNPSIGPINNSEISQKQNSLNNAKGNSSPSFGDNVQSGTNSLFRRQTNNFPENP 144 Q + NG + +N + +N + G N+NN+N+ + Q NS SIGP +NSEI QKQNS+NNA G SSPSFG NVQS TN L+R QTNNFP NP Sbjct: 101 QSAANGLYRSRTNYSPVNPSTSTGINVNNRNDLVSQSNSPSYR-------------------SIGPTDNSEILQKQNSVNNAGGYSSPSFGSNVQSATNGLYRSQTNNFPGNP 194
BLAST of EMLSAG00000010314 vs. L. salmonis peptides
Match: EMLSAP00000009194 (pep:novel supercontig:LSalAtl2s:LSalAtl2s583:258140:262233:-1 gene:EMLSAG00000009194 transcript:EMLSAT00000009194 description:"maker-LSalAtl2s583-snap-gene-1.41") HSP 1 Score: 136.732 bits (343), Expect = 2.374e-38 Identity = 101/182 (55.49%), Postives = 120/182 (65.93%), Query Frame = 0 Query: 199 NVQSATNGLYRSHTNYPGTPLSSTGINVNNQNDLISQSNSPSYRSIGINVNNQNDLISQSNSPSYRSIGPIDNSEISQKQNSVNNAGGYSSPSFGSNVQSATNGLYRSQTNNYPESPMSSTGVNLNNKNSLVSQSNSPSYRSHGPVANLEVSQN---QNSLNNAGGYSSPSFGSNVQSATNG 377 NVQSATN LYRS +N NN IS S G+N+NNQN+ +++ NSP YRS P+ NSEI+Q QNS NNAG Y SP + V S ++G+ + NY SPMSS GVNLNN+N LVSQSNSPSYRS GP +N E+SQ QNS+NNA YS+PSFGSNVQSATNG Sbjct: 14 NVQSATNALYRSISN-------------NNAGASISSS--------GVNINNQNEFVNKQNSPYYRSTRPVSNSEINQNQNSANNAGDYFSPKHNNKVISVSSGISKK---NY--SPMSSNGVNLNNQNHLVSQSNSPSYRSIGPFSNNEISQKQNSQNSVNNADAYSTPSFGSNVQSATNG 169 HSP 2 Score: 130.568 bits (327), Expect = 4.350e-36 Identity = 95/184 (51.63%), Postives = 119/184 (64.67%), Query Frame = 0 Query: 123 DNVQSGTNSLFRRQTNNFPENPLSSTGVNLNIQNSLLSQSNSGLYRSMSPLTNSEISQKQNSVNNAAGFSSPSFGSNVQSATNGLYRSHTNYPGTPLSSTGINVNNQNDLISQSNSPSYRSIGINVNNQNDLISQSNSPSYRSIGPIDNSEISQK---QNSVNNAGGYSSPSFGSNVQSATNGL 303 NVQS TN+L+R +NN +SS+GVN+N QN +++ NS YRS P++NSEI+Q QNS NNA + SP + V S ++G+ S NY +P+SS G+N+NNQN L+SQSNSP SYRSIGP N+EISQK QNSVNNA YS+PSFGSNVQSATNGL Sbjct: 13 SNVQSATNALYRSISNNNAGASISSSGVNINNQNEFVNKQNSPYYRSTRPVSNSEINQNQNSANNAGDYFSPKHNNKVISVSSGI--SKKNY--SPMSSNGVNLNNQNHLVSQSNSP----------------------SYRSIGPFSNNEISQKQNSQNSVNNADAYSTPSFGSNVQSATNGL 170 HSP 3 Score: 90.1225 bits (222), Expect = 1.311e-21 Identity = 84/179 (46.93%), Postives = 107/179 (59.78%), Query Frame = 0 Query: 32 QQSTNGQNENISNGNDINSNMPNGDNLNNQNESMDQLNSNGQSENTSNGNKGNSNFPNGGNPSIGPINNSEISQKQNSLNNAKGNSSPSFGDNVQSGTNSLFRRQTNNFPENPLSSTGVNLNIQNSLLSQSNSGLYRSMSPLTNSEISQK---QNSVNNAAGFSSPSFGSNVQSATNGL 207 Q +TN +ISN N S +G N+NNQNE + NK NS + S P++NSEI+Q QNS NNA SP + V S ++ + ++ +P+SS GVNLN QN L+SQSNS YRS+ P +N+EISQK QNSVNNA +S+PSFGSNVQSATNGL Sbjct: 16 QSATNALYRSISNNNAGASISSSGVNINNQNEFV---------------NKQNSPYYR----STRPVSNSEINQNQNSANNAGDYFSPKHNNKVISVSSGISKKNY-----SPMSSNGVNLNNQNHLVSQSNSPSYRSIGPFSNNEISQKQNSQNSVNNADAYSTPSFGSNVQSATNGL 170
BLAST of EMLSAG00000010314 vs. L. salmonis peptides
Match: EMLSAP00000004268 (pep:novel supercontig:LSalAtl2s:LSalAtl2s223:77:757:-1 gene:EMLSAG00000004268 transcript:EMLSAT00000004268 description:"maker-LSalAtl2s223-snap-gene-0.10") HSP 1 Score: 107.457 bits (267), Expect = 3.535e-28 Identity = 75/160 (46.88%), Postives = 88/160 (55.00%), Query Frame = 0 Query: 171 SPLTNSEISQKQNSVNNAAGFSSPSFGSNVQSATNGLYRSHTNY-PGTPLSSTGINVNNQNDLISQSNSPSYRSIGINVNNQNDLISQSNSPSYRSIGPIDNSEISQKQNSVNNAGGYSSPSFGSNVQSATNGLYRSQTNNYPESPMSSTGVNLNNKNSL 329 +P SEI+Q NS NNA FSSPSFGSN Q+ATNGLYRS TN G ++STG+N NSVNNA G+SSPSFGSNVQSATNGLYRSQ N+Y +P+SS+GVNLN++NSL Sbjct: 20 TPALTSEINQNINSENNAGRFSSPSFGSNAQAATNGLYRSITNNNAGASIASTGVN-----------------------------------------------------NSVNNAEGHSSPSFGSNVQSATNGLYRSQNNDYLRNPISSSGVNLNSQNSL 126 HSP 2 Score: 84.3445 bits (207), Expect = 6.752e-20 Identity = 57/110 (51.82%), Postives = 65/110 (59.09%), Query Frame = 0 Query: 268 PIDNSEISQKQNSVNNAGGYSSPSFGSNVQSATNGLYRSQTNNYPESPMSSTGVNLNNKNSLVSQSNSPSYRSHGPVANLEVSQNQNSLNNAGGYSSPSFGSNVQSATNG 377 P SEI+Q NS NNAG +SSPSFGSN Q+ATNGLYRS TNN + ++STGVN NS+NNA G+SSPSFGSNVQSATNG Sbjct: 21 PALTSEINQNINSENNAGRFSSPSFGSNAQAATNGLYRSITNNNAGASIASTGVN-------------------------------NSVNNAEGHSSPSFGSNVQSATNG 99 HSP 3 Score: 68.1662 bits (165), Expect = 5.580e-14 Identity = 35/51 (68.63%), Postives = 43/51 (84.31%), Query Frame = 0 Query: 108 NSLNNAKGNSSPSFGDNVQSGTNSLFRRQTNNFPENPLSSTGVNLNIQNSL 158 NS+NNA+G+SSPSFG NVQS TN L+R Q N++ NP+SS+GVNLN QNSL Sbjct: 76 NSVNNAEGHSSPSFGSNVQSATNGLYRSQNNDYLRNPISSSGVNLNSQNSL 126 The following BLAST results are available for this feature:
BLAST of EMLSAG00000010314 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000010314 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 2
BLAST of EMLSAG00000010314 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 4
BLAST of EMLSAG00000010314 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000010314 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000010314 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000010314 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s6833:1..1974+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000010314-693080 ID=EMLSAG00000010314-693080|Name=EMLSAG00000010314|organism=Lepeophtheirus salmonis|type=gene|length=1974bp|location=Sequence derived from alignment at LSalAtl2s6833:1..1974+ (Lepeophtheirus salmonis)back to top Add to Basket
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