EMLSAG00000011595, EMLSAG00000011595-694361 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000011595
Unique NameEMLSAG00000011595-694361
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000011595 vs. GO
Match: - (symbol:OSJNBa0016G10.12 "Putative PMS2 postmeiotic segregation increased 2" species:39947 "Oryza sativa Japonica Group" [GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP catabolic process" evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA] [GO:0007131 "reciprocal meiotic recombination" evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389 "MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0009555 GO:GO:0006298 GO:GO:0016887 GO:GO:0048316 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AP008208 EMBL:CM000139 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858 OMA:SQRLVHP ProtClustDB:CLSN2689293 EMBL:AP005874 RefSeq:NP_001047292.1 UniGene:Os.23276 EnsemblPlants:OS02T0592300-02 GeneID:4329835 KEGG:osa:4329835 Uniprot:Q69L72)

HSP 1 Score: 85.1149 bits (209), Expect = 6.464e-16
Identity = 38/102 (37.25%), Postives = 60/102 (58.82%), Query Frame = 0 
Query:    8 PDPTLCRSTNDRCFVYVNDRPVEMPKLSRLLKKYLCDAKKKSYPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKLVEAKLKELYCNEKIEDSFHILED 109
            P P   R++ DR F YVN RPV+MPK+S+L+ +    +  K YP+A++   +P    D NV P K+ +FF  E +IL  +   ++ LYC ++   S + +ED
Sbjct:  253 PGPGSGRNSGDRQFFYVNGRPVDMPKVSKLVNELYRSSNAKQYPVAVLNFCIPTTSYDVNVAPDKRKIFFSSEHAILLSLREGIENLYCPQQCSFSINSVED 354
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BLAST of EMLSAG00000011595 vs. GO
Match: - (symbol:pms-2 species:6239 "Caenorhabditis elegans" [GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP] InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 GO:GO:0016887 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858 OMA:SQRLVHP GeneTree:ENSGT00530000063289 OrthoDB:EOG76QFGS EMBL:AL022272 EMBL:Z74033 PIR:B89219 PIR:T21953 PIR:T21957 RefSeq:NP_505933.1 UniGene:Cel.17986 ProteinModelPortal:G5EFG5 SMR:G5EFG5 IntAct:G5EFG5 PRIDE:G5EFG5 EnsemblMetazoa:H12C20.2a GeneID:179587 KEGG:cel:CELE_H12C20.2 CTD:179587 WormBase:H12C20.2a NextBio:906048 PRO:PR:G5EFG5 ArrayExpress:G5EFG5 Uniprot:G5EFG5)

HSP 1 Score: 70.8626 bits (172), Expect = 1.622e-11
Identity = 34/82 (41.46%), Postives = 51/82 (62.20%), Query Frame = 0 
Query:   14 RSTNDRCFVYVNDRPVEMPKLSRLLKKYLCDAKKKSYPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKLVEAKLKELY 95
            R T+DR FVY+N+RPVE  ++  ++        KK YPI ++ I+VP + ID NV P KKTV  ++E  +L +V A + + Y
Sbjct:  281 RGTSDRQFVYINNRPVEYSRVCSVINDVYKQFNKKQYPIIVLFIDVPPEKIDVNVTPDKKTVMLEKERHLLAVVRASMMKTY 362
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BLAST of EMLSAG00000011595 vs. GO
Match: - (symbol:pms-2 "Protein PMS-2, isoform a" species:6239 "Caenorhabditis elegans" [GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006200 "ATP catabolic process" evidence=IBA] [GO:0006298 "mismatch repair" evidence=IEA;IBA] [GO:0007131 "reciprocal meiotic recombination" evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA] [GO:0030983 "mismatched DNA binding" evidence=IEA] [GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389 "MutLalpha complex" evidence=IEA;IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 GO:GO:0016887 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858 OMA:SQRLVHP GeneTree:ENSGT00530000063289 OrthoDB:EOG76QFGS EMBL:AL022272 EMBL:Z74033 PIR:B89219 PIR:T21953 PIR:T21957 RefSeq:NP_505933.1 UniGene:Cel.17986 ProteinModelPortal:G5EFG5 SMR:G5EFG5 IntAct:G5EFG5 PRIDE:G5EFG5 EnsemblMetazoa:H12C20.2a GeneID:179587 KEGG:cel:CELE_H12C20.2 CTD:179587 WormBase:H12C20.2a NextBio:906048 PRO:PR:G5EFG5 ArrayExpress:G5EFG5 Uniprot:G5EFG5)

HSP 1 Score: 70.8626 bits (172), Expect = 1.622e-11
Identity = 34/82 (41.46%), Postives = 51/82 (62.20%), Query Frame = 0 
Query:   14 RSTNDRCFVYVNDRPVEMPKLSRLLKKYLCDAKKKSYPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKLVEAKLKELY 95
            R T+DR FVY+N+RPVE  ++  ++        KK YPI ++ I+VP + ID NV P KKTV  ++E  +L +V A + + Y
Sbjct:  281 RGTSDRQFVYINNRPVEYSRVCSVINDVYKQFNKKQYPIIVLFIDVPPEKIDVNVTPDKKTVMLEKERHLLAVVRASMMKTY 362
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BLAST of EMLSAG00000011595 vs. GO
Match: - (symbol:PMS1 "AT4G02460" species:3702 "Arabidopsis thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IC] [GO:0006200 "ATP catabolic process" evidence=IBA] [GO:0006298 "mismatch repair" evidence=ISS;IMP] [GO:0007131 "reciprocal meiotic recombination" evidence=RCA;IBA] [GO:0016887 "ATPase activity" evidence=IBA] [GO:0030983 "mismatched DNA binding" evidence=IBA] [GO:0032389 "MutLalpha complex" evidence=IBA] [GO:0006310 "DNA recombination" evidence=IMP] [GO:0009555 "pollen development" evidence=RCA;IMP] [GO:0010154 "fruit development" evidence=IMP] [GO:0048316 "seed development" evidence=IMP] [GO:0000278 "mitotic cell cycle" evidence=RCA] [GO:0000724 "double-strand break repair via homologous recombination" evidence=RCA] [GO:0006261 "DNA-dependent DNA replication" evidence=RCA] [GO:0006275 "regulation of DNA replication" evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA] [GO:0006312 "mitotic recombination" evidence=RCA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0007129 "synapsis" evidence=RCA] [GO:0007140 "male meiosis" evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation" evidence=RCA] [GO:0009616 "virus induced gene silencing" evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009691 "cytokinin biosynthetic process" evidence=RCA] [GO:0009793 "embryo development ending in seed dormancy" evidence=RCA] [GO:0009845 "seed germination" evidence=RCA] [GO:0009880 "embryonic pattern specification" evidence=RCA] [GO:0009909 "regulation of flower development" evidence=RCA] [GO:0009933 "meristem structural organization" evidence=RCA] [GO:0010050 "vegetative phase change" evidence=RCA] [GO:0010072 "primary shoot apical meristem specification" evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182 "sugar mediated signaling pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA] [GO:0010267 "production of ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0010431 "seed maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle process" evidence=RCA] [GO:0016444 "somatic cell DNA recombination" evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016568 "chromatin modification" evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0031047 "gene silencing by RNA" evidence=RCA] [GO:0035196 "production of miRNAs involved in gene silencing by miRNA" evidence=RCA] [GO:0043687 "post-translational protein modification" evidence=RCA] [GO:0045595 "regulation of cell differentiation" evidence=RCA] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=RCA] [GO:0048366 "leaf development" evidence=RCA] [GO:0048825 "cotyledon development" evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA] [GO:0051301 "cell division" evidence=RCA] [GO:0051726 "regulation of cell cycle" evidence=RCA] InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524 EMBL:CP002687 GO:GO:0009555 GO:GO:0006298 GO:GO:0016887 GO:GO:0048316 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 EMBL:AL161494 eggNOG:COG0323 EMBL:AF069298 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 EMBL:AY047228 EMBL:AK117777 PIR:T01304 RefSeq:NP_567236.1 UniGene:At.26416 ProteinModelPortal:Q941I6 SMR:Q941I6 STRING:3702.AT4G02460.1-P PRIDE:Q941I6 EnsemblPlants:AT4G02460.1 GeneID:827997 KEGG:ath:AT4G02460 TAIR:AT4G02460 HOGENOM:HOG000165474 InParanoid:Q941I6 KO:K10858 OMA:SQRLVHP PhylomeDB:Q941I6 ProtClustDB:CLSN2689293 PRO:PR:Q941I6 ArrayExpress:Q941I6 Genevestigator:Q941I6 Uniprot:Q941I6)

HSP 1 Score: 68.9366 bits (167), Expect = 7.078e-11
Identity = 31/88 (35.23%), Postives = 49/88 (55.68%), Query Frame = 0 
Query:    8 PDPTLCRSTNDRCFVYVNDRPVEMPKLSRLLKKYLCDAKKKSYPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKLVEAKLKELY 95
            P     R+  DR + ++N RPV+MPK+S+L+ +   D   + YP+ ++   VP    D NV P K+ VFF  E S++  +   L E+Y
Sbjct:  261 PGQGTGRNLADRQYFFINGRPVDMPKVSKLVNELYKDTSSRKYPVTILDFIVPGGACDLNVTPDKRKVFFSDETSVIGSLREGLNEIY 348
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BLAST of EMLSAG00000011595 vs. GO
Match: - (symbol:pms1 "MutL DNA mismatch repair protein" species:44689 "Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006974 "cellular response to DNA damage stimulus" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0032407 "MutSalpha complex binding" evidence=IBA] [GO:0032389 "MutLalpha complex" evidence=IEA;IBA] [GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0016887 "ATPase activity" evidence=ISS;IBA] [GO:0007131 "reciprocal meiotic recombination" evidence=IBA] [GO:0006298 "mismatch repair" evidence=IEA;ISS;IBA] [GO:0006200 "ATP catabolic process" evidence=ISS;IBA] [GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0030983 "mismatched DNA binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853 dictyBase:DDB_G0283981 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 GO:GO:0016887 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 EMBL:AAFI02000058 eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858 RefSeq:XP_638844.1 ProteinModelPortal:Q54QA0 STRING:44689.DDB_0232417 PRIDE:Q54QA0 EnsemblProtists:DDB0232417 GeneID:8624368 KEGG:ddi:DDB_G0283981 OMA:VAMENID ProtClustDB:CLSZ2846737 PRO:PR:Q54QA0 Uniprot:Q54QA0)

HSP 1 Score: 66.2402 bits (160), Expect = 5.730e-10
Identity = 32/85 (37.65%), Postives = 50/85 (58.82%), Query Frame = 0 
Query:   12 LCRSTNDRCFVYVNDRPVEMPKLSRLLKK-YLCDAKKKSYPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKLVEAKLKELY 95
            L RS  DR F +VN RP E  KL++ +   Y    K+ SYP+ +  I +P  + D NV P K+T+F ++E+ +L L+   LK ++
Sbjct:  289 LSRSCADRQFFFVNSRPFEHSKLAKEINSLYQSFHKRGSYPVVIFNIEMPTNNYDVNVTPDKRTIFIQKEQQLLLLITDGLKTMW 373
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BLAST of EMLSAG00000011595 vs. GO
Match: - (symbol:PMS1 species:5476 "Candida albicans" [GO:0032139 "dinucleotide insertion or deletion binding" evidence=IEA] [GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000404 "loop DNA binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA] [GO:0032389 "MutLalpha complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000710 "meiotic mismatch repair" evidence=IEA] [GO:0043570 "maintenance of DNA repeat elements" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00853 CGD:CAL0006312 GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0323 GO:GO:0032389 PANTHER:PTHR10073 OrthoDB:EOG72RN8H PANTHER:PTHR10073:SF9 KO:K10858 EMBL:AACQ01000248 EMBL:AACQ01000247 RefSeq:XP_710677.1 RefSeq:XP_710686.1 ProteinModelPortal:Q59LR7 STRING:5476.CAL0006312 GeneID:3647714 GeneID:3647723 KEGG:cal:CaO19.1605 KEGG:cal:CaO19.9173 Uniprot:Q59LR7)

HSP 1 Score: 58.151 bits (139), Expect = 1.480e-7
Identity = 30/84 (35.71%), Postives = 45/84 (53.57%), Query Frame = 0 
Query:   12 LCRSTNDRCFVYVNDRPVEMPKLSRLLKKYLCDAKKKSYPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKLVEAKLKELY 95
            L RS  DR F+Y+N RP+   KL +L+ +         YPI ++ I +    +D N+ P K  V  K E +IL+ +E KL E +
Sbjct:  129 LGRSAPDRQFLYLNKRPIVFKKLYKLINEIYKSYNHVQYPIYIIDIVINPNLVDINLLPDKTNVLIKDETTILQTIETKLSEFF 212
[Close]
BLAST of EMLSAG00000011595 vs. GO
Match: - (symbol:PMS1 "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507 Pfam:PF01119 SMART:SM00387 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 Gene3D:1.10.30.10 Pfam:PF00505 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 OrthoDB:EOG7S4X59 TreeFam:TF300711 GeneTree:ENSGT00530000063289 EMBL:AADN03005365 PRIDE:F1P0J4 Ensembl:ENSGALT00000003701 PRO:PR:F1P0J4 Uniprot:F1P0J4)

HSP 1 Score: 57.3806 bits (137), Expect = 2.823e-7
Identity = 56/219 (25.57%), Postives = 102/219 (46.58%), Query Frame = 0 
Query:   21 FVYVNDRPVEMPKLSRLLKKYLCDAKKKS----YPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKLVEAKLKELY----------CNEKIEDSFHILEDKVVETQRVENNKDHFIVREYQKHTLENSDWNAQSKSDGILKAKHDSHITLNTKPLSSESIGNSMQKENSPQITSVDDVALRNSTLIDKQTKFFNLSFEKSIEHNISSTTPKSKSKN 225
            F++VN RPV   ++ +L+++Y     +K     YP+  + I VP   +D NV P K  V  + +ES+L  VE  LK LY           N+    S  +   K  +T  V N K+     +   HT   S +N+  +S    +A  ++ I LN +  S +++ + ++++ + +  +  + +LR   L +++ K  N +    I  N +   P SK + 
Sbjct:  259 FIFVNSRPVHQKEILKLIRQYYSVLMQKDSTRLYPVFFLNITVPASAVDVNVTPDKTEVLLQYKESVLLAVENVLKSLYGPLPATVSGEANKTDVTSEDMFVHKAGQTDVVVNEKEPSGNNDLHAHTSFLS-FNSDVQS---YQAGKNTEICLNHQIFSGDTVHSCLEEKEASKNDAFQEGSLR--LLCEEEQKGQNTT---GIPSNSAPVDPGSKEEG 468
[Close]
BLAST of EMLSAG00000011595 vs. GO
Match: - (symbol:pms1 "MutL family mismatch-repair protein Pms1" species:4896 "Schizosaccharomyces pombe" [GO:0000228 "nuclear chromosome" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0043570 "maintenance of DNA repeat elements" evidence=IMP] [GO:0006298 "mismatch repair" evidence=IGI;IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0030983 "mismatched DNA binding" evidence=IEA] [GO:0032389 "MutLalpha complex" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF02518 Pfam:PF08676 SMART:SM00387 SMART:SM00853 PomBase:SPAC19G12.02c Prosite:PS00058 GO:GO:0005524 EMBL:CU329670 GO:GO:0003677 GO:GO:0006298 GO:GO:0016887 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0000228 GO:GO:0043570 eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 OrthoDB:EOG72RN8H PANTHER:PTHR10073:SF9 HOGENOM:HOG000165474 KO:K10858 OMA:SQRLVHP EMBL:X96581 PIR:T37989 RefSeq:NP_594417.1 ProteinModelPortal:P54280 BioGrid:279037 MINT:MINT-4690941 STRING:4896.SPAC19G12.02c-1 EnsemblFungi:SPAC19G12.02c.1 GeneID:2542582 KEGG:spo:SPAC19G12.02c NextBio:20803632 PRO:PR:P54280 Uniprot:P54280)

HSP 1 Score: 55.4546 bits (132), Expect = 1.083e-6
Identity = 24/81 (29.63%), Postives = 48/81 (59.26%), Query Frame = 0 
Query:   14 RSTNDRCFVYVNDRPVEMPKLSRLLKKYLCDAKKKSYPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKLVEAKLKEL 94
            R++N+R  +++N R V +PK++R++++          P   + + +    ID NV P KK+VF  +E+SI++ ++  L+ L
Sbjct:  250 RASNERQMLFINRRLVNLPKIARVIQEVFKPYSMAQSPFFAINLRITNGTIDINVSPDKKSVFLSEEDSIIEFIKNSLQNL 330
[Close]
BLAST of EMLSAG00000011595 vs. GO
Match: - (symbol:PMS1 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507 Pfam:PF01119 SMART:SM00387 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 Gene3D:1.10.30.10 Pfam:PF00505 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 CTD:5378 KO:K10864 OMA:PFFHHLT OrthoDB:EOG7S4X59 TreeFam:TF300711 GeneTree:ENSGT00530000063289 EMBL:AAEX03017899 RefSeq:XP_005640498.1 RefSeq:XP_005640499.1 RefSeq:XP_005640500.1 RefSeq:XP_005640501.1 RefSeq:XP_536002.1 PRIDE:E2RAQ2 Ensembl:ENSCAFT00000014945 GeneID:478840 KEGG:cfa:478840 Uniprot:E2RAQ2)

HSP 1 Score: 55.0694 bits (131), Expect = 1.488e-6
Identity = 26/85 (30.59%), Postives = 46/85 (54.12%), Query Frame = 0 
Query:   15 STNDRCFVYVNDRPVEMPKLSRLLKKY----LCDAKKKSYPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKLVEAKLKELY 95
            ST +R F+++N+RPV    + +L++ Y          + YPI  + I+VP  D+D N+ P K  V  + +E++L  +E  +   Y
Sbjct:  253 STPERSFIFINNRPVHQKDILKLIRHYYNLKCLKEASRLYPIFFLKIDVPTADVDVNITPDKSQVLIQNKEAVLIALENLMTTCY 337

HSP 2 Score: 46.2098 bits (108), Expect = 9.782e-4
Identity = 44/167 (26.35%), Postives = 65/167 (38.92%), Query Frame = 0 
Query:  375 ELTVIGKLSDSEIWTGLLNESIYVLHPSRFREISIYNKLLDAQAL--NPVEMPY-----------------PMIIDKYREDIITLASDSRLSRNGFK------VSVDGRYL-THSCHSVLSEIDVDDLFHILDIIKKNPTASLAECRSPKIKRFFQKECMKLVSNCP 515
            EL +I  L   + W       + +L+P R  E  ++ +L++   L   P+E P                   M  D  R    T  SD RL+ NGFK      VS+   YL      + L    V DL  IL+ I       + ECR  K+  + + E ++L    P
Sbjct:  721 ELCLIHNLKFPDAWLITSKTEVMLLNPYRVEEALLFKRLIENHKLPAQPLEKPIILTESLFNGSHYLEMLCKMTTDDQRYSGSTYLSDPRLTANGFKIKWIPGVSIAEDYLEIEEMANCLPFYGVMDLKEILNAILNKNAKEVYECRPRKVISYLEGEAVRLSRQLP 887
[Close]
BLAST of EMLSAG00000011595 vs. GO
Match: - (symbol:pms1 "PMS1 postmeiotic segregation increased 1 (S. cerevisiae)" species:7955 "Danio rerio" [GO:0030983 "mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA;IBA] [GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0032389 "MutLalpha complex" evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA] [GO:0006200 "ATP catabolic process" evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0007131 "reciprocal meiotic recombination" evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA] InterPro:IPR009071 InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507 Pfam:PF01119 SMART:SM00387 Prosite:PS00058 ZFIN:ZDB-GENE-030616-528 GO:GO:0005524 GO:GO:0006298 GO:GO:0016887 Gene3D:1.10.30.10 Pfam:PF00505 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003697 EMBL:AL672217 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 CTD:5378 HOVERGEN:HBG031886 KO:K10864 RefSeq:NP_958476.2 UniGene:Dr.85558 ProteinModelPortal:Q8JFR9 GeneID:368631 KEGG:dre:368631 InParanoid:Q8JFR9 NextBio:20813079 Uniprot:Q8JFR9)

HSP 1 Score: 55.0694 bits (131), Expect = 1.577e-6
Identity = 27/84 (32.14%), Postives = 45/84 (53.57%), Query Frame = 0 
Query:   18 DRCFVYVNDRPVEMPKLSRLLKKYLCDAKKKS------YPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKLVEAKLKELY 95
            D+ F++VN RPV   ++ +L+K+Y   A+  S      YP  ++ I +P   +D N+ P K  V  + ++ +L  VE  L  LY
Sbjct:  256 DKSFIFVNSRPVHHKEILKLIKQYYTSAQSNSESVSRRYPTFMMNITIPASTVDVNLTPDKTEVMLQNKDEVLLSVETMLISLY 339
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BLAST of EMLSAG00000011595 vs. C. finmarchicus
Match: gi|592903297|gb|GAXK01055078.1| (TSA: Calanus finmarchicus comp84845_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 50.8322 bits (120), Expect = 1.113e-5
Identity = 28/110 (25.45%), Postives = 60/110 (54.55%), Query Frame = 0 
Query:   12 LCRSTNDRCFVYVNDRPVEMPKLSRLLKKYLCDAKK---KSYPIALVTINVP---IKDIDANVEPSKKTVFFKQEESILKLVEAKLKELY--------CNEKIEDSFHIL 107
            L R T D+ +V+VN RPVE+ ++ +L ++    A +     YP+  ++INV    +  +D N+EP+K+ V      +++  +E  L+ ++         +E+++D++  +
Sbjct: 1703 LGRCTTDKTWVFVNKRPVEVKEVEKLARELFSQAGRLESDKYPVCCLSINVSGGQLAKLDQNLEPNKQRVGLGCRGALMVGLETVLRGVWKLKGDAEQMDEELDDTYGAM 2032
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BLAST of EMLSAG00000011595 vs. C. finmarchicus
Match: gi|592884302|gb|GAXK01074073.1| (TSA: Calanus finmarchicus comp122315_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 50.447 bits (119), Expect = 1.332e-5
Identity = 47/205 (22.93%), Postives = 92/205 (44.88%), Query Frame = 0 
Query:   21 FVYVNDRPVEMPKLSRLLKK-YLCDAKKKSYPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKLVEAKLKELYCNEKIEDSFH---ILEDKVVETQRVENNKDHFIVREYQKHTLENSDWNAQSKSDGILKAK--HDSHITLNTKPLSSESIGNSMQKENSPQITSVDDVALRNSTLIDKQTKFF----NLSFEKSIEHNIS 215
             +++N+R V+   + R ++  Y     K S+P   +++N+  +++D NV P+K  VFF  ++SI++ ++  ++E   N     +F+   +L    V  +  EN +     ++     +  +D N Q K D  L  K   D     N K  S E    +  K+   QI+      LR + L +   +      NL+F   ++  ++
Sbjct:  826 LLFINNRLVDSTAIKRAIEHVYASYLPKGSFPFIYLSLNIAPQNVDVNVHPTKHEVFFLHQDSIIEKIQQGMEEKLLNSNASRTFYTQKLLPGAGVTLEMFENKEKALAAKD-----MVRTDSNMQ-KMDKFLTKKDTEDDADMKNDKVASEEHQVKTTGKQTGRQISLSSVTELRQAILSEGSAEITSITSNLTFVGCVDRELA 1422
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BLAST of EMLSAG00000011595 vs. C. finmarchicus
Match: gi|592884301|gb|GAXK01074074.1| (TSA: Calanus finmarchicus comp122315_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 46.595 bits (109), Expect = 1.810e-4
Identity = 21/81 (25.93%), Postives = 47/81 (58.02%), Query Frame = 0 
Query:   21 FVYVNDRPVEMPKLSRLLKK-YLCDAKKKSYPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKLVEAKLKELYCNEKI 100
             +++N+R V+   + R ++  Y     K S+P   +++N+  +++D NV P+K  VFF  ++SI++ ++  ++E   N  +
Sbjct:  826 LLFINNRLVDSTAIKRAIEHVYASYLPKGSFPFIYLSLNIAPQNVDVNVHPTKHEVFFLHQDSIIERIQQGMEEKLLNSNV 1068
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BLAST of EMLSAG00000011595 vs. C. finmarchicus
Match: gi|592930520|gb|GAXK01028025.1| (TSA: Calanus finmarchicus comp300333_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 31.5722 bits (70), Expect = 2.703e+0
Identity = 18/46 (39.13%), Postives = 27/46 (58.70%), Query Frame = 0 
Query:  503 FQKECMK-LVSNCPP--GINNKEMLQLYSSSLKYFKNIAQETCFHR 545
            F+KEC K +V+ C P  G  +    Q    S ++ K IAQETC+++
Sbjct:   35 FKKECSKQMVTVCQPQTGYQSHGYNQYNKGSYQHCKEIAQETCYNK 172
[Close]
BLAST of EMLSAG00000011595 vs. C. finmarchicus
Match: gi|592930523|gb|GAXK01028022.1| (TSA: Calanus finmarchicus comp300333_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 31.9574 bits (71), Expect = 3.560e+0
Identity = 18/46 (39.13%), Postives = 27/46 (58.70%), Query Frame = 0 
Query:  503 FQKECMK-LVSNCPP--GINNKEMLQLYSSSLKYFKNIAQETCFHR 545
            F+KEC K +V+ C P  G  +    Q    S ++ K IAQETC+++
Sbjct:  219 FKKECSKQMVTVCQPQTGYQSHGYNQYNKGSYQHCKEIAQETCYNK 356
[Close]
BLAST of EMLSAG00000011595 vs. C. finmarchicus
Match: gi|592772173|gb|GAXK01182395.1| (TSA: Calanus finmarchicus comp1945818_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 31.5722 bits (70), Expect = 8.872e+0
Identity = 24/97 (24.74%), Postives = 46/97 (47.42%), Query Frame = 0 
Query:    1 MWVSKTVPDPTLCRSTNDRCFVYVND----------RPVEMPKLSRLLKKYL-CDAKKKSYPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKL 86
            +W+SKT       R+T      Y  D          R +E+P++ R L   + C+ ++       +T+N+ + ++D N E  KKT+F + + ++ K 
Sbjct:   65 LWISKT-------RTTGQDILEYAIDWETLYNKIKQRGIEIPEVPRALMFLMTCNMEE-------ITLNLVLSELDINSENGKKTLFDQSKAAVRKF 313
[Close]
BLAST of EMLSAG00000011595 vs. L. salmonis peptides
Match: EMLSAP00000011595 (pep:novel supercontig:LSalAtl2s:LSalAtl2s800:379462:382291:1 gene:EMLSAG00000011595 transcript:EMLSAT00000011595 description:"maker-LSalAtl2s800-snap-gene-3.52")

HSP 1 Score: 1139.41 bits (2946), Expect = 0.000e+0
Identity = 558/558 (100.00%), Postives = 558/558 (100.00%), Query Frame = 0 
Query:    1 MWVSKTVPDPTLCRSTNDRCFVYVNDRPVEMPKLSRLLKKYLCDAKKKSYPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKLVEAKLKELYCNEKIEDSFHILEDKVVETQRVENNKDHFIVREYQKHTLENSDWNAQSKSDGILKAKHDSHITLNTKPLSSESIGNSMQKENSPQITSVDDVALRNSTLIDKQTKFFNLSFEKSIEHNISSTTPKSKSKNIIDDSIMSKDPGSHDVLFKNNSFISSTLIDSSNKNASFVNNSKEDTINSKMSTLHSWATGKTMPESPPVGMVVPLMEGKGXKRPNVFKRIQDHHPPKKSRSYGDDSLIKLIKPYHQKETIKLHRHEVRVDFDIKKLHSKDCVSKSRHINELTVIGKLSDSEIWTGLLNESIYVLHPSRFREISIYNKLLDAQALNPVEMPYPMIIDKYREDIITLASDSRLSRNGFKVSVDGRYLTHSCHSVLSEIDVDDLFHILDIIKKNPTASLAECRSPKIKRFFQKECMKLVSNCPPGINNKEMLQLYSSSLKYFKNIAQETCFHRKKVMLKIYDYKDL 558
            MWVSKTVPDPTLCRSTNDRCFVYVNDRPVEMPKLSRLLKKYLCDAKKKSYPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKLVEAKLKELYCNEKIEDSFHILEDKVVETQRVENNKDHFIVREYQKHTLENSDWNAQSKSDGILKAKHDSHITLNTKPLSSESIGNSMQKENSPQITSVDDVALRNSTLIDKQTKFFNLSFEKSIEHNISSTTPKSKSKNIIDDSIMSKDPGSHDVLFKNNSFISSTLIDSSNKNASFVNNSKEDTINSKMSTLHSWATGKTMPESPPVGMVVPLMEGKGXKRPNVFKRIQDHHPPKKSRSYGDDSLIKLIKPYHQKETIKLHRHEVRVDFDIKKLHSKDCVSKSRHINELTVIGKLSDSEIWTGLLNESIYVLHPSRFREISIYNKLLDAQALNPVEMPYPMIIDKYREDIITLASDSRLSRNGFKVSVDGRYLTHSCHSVLSEIDVDDLFHILDIIKKNPTASLAECRSPKIKRFFQKECMKLVSNCPPGINNKEMLQLYSSSLKYFKNIAQETCFHRKKVMLKIYDYKDL
Sbjct:    1 MWVSKTVPDPTLCRSTNDRCFVYVNDRPVEMPKLSRLLKKYLCDAKKKSYPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKLVEAKLKELYCNEKIEDSFHILEDKVVETQRVENNKDHFIVREYQKHTLENSDWNAQSKSDGILKAKHDSHITLNTKPLSSESIGNSMQKENSPQITSVDDVALRNSTLIDKQTKFFNLSFEKSIEHNISSTTPKSKSKNIIDDSIMSKDPGSHDVLFKNNSFISSTLIDSSNKNASFVNNSKEDTINSKMSTLHSWATGKTMPESPPVGMVVPLMEGKGXKRPNVFKRIQDHHPPKKSRSYGDDSLIKLIKPYHQKETIKLHRHEVRVDFDIKKLHSKDCVSKSRHINELTVIGKLSDSEIWTGLLNESIYVLHPSRFREISIYNKLLDAQALNPVEMPYPMIIDKYREDIITLASDSRLSRNGFKVSVDGRYLTHSCHSVLSEIDVDDLFHILDIIKKNPTASLAECRSPKIKRFFQKECMKLVSNCPPGINNKEMLQLYSSSLKYFKNIAQETCFHRKKVMLKIYDYKDL 558
[Close]
BLAST of EMLSAG00000011595 vs. L. salmonis peptides
Match: EMLSAP00000001195 (pep:novel supercontig:LSalAtl2s:LSalAtl2s119:448074:452320:1 gene:EMLSAG00000001195 transcript:EMLSAT00000001195 description:"maker-LSalAtl2s119-augustus-gene-4.12")

HSP 1 Score: 56.6102 bits (135), Expect = 1.135e-8
Identity = 40/164 (24.39%), Postives = 75/164 (45.73%), Query Frame = 0 
Query:   14 RSTNDRCFVYVNDRPVEMPKLSRLLKKYLCDAKKKSYPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKLVEAKLKELYCNEKIEDSFHILEDKVVETQRVENNKDHFIVREYQKHTLENSDWNAQSKSDGILKAKHDSHITLNTKPLSSESIGNSMQKEN 177
            R+ +DR F+Y+N RP ++ K+ R + +      +  YP   + I    + +D NV P K+ +F + E S++  +   L +L+     ED   I +   +     + N++ F   E  K  L NSD +  +K   I+ +     +  N + +  E +    Q E+
Sbjct:  189 RNASDRQFLYLNHRPADLNKIRRRINETYKSYNRHQYPFLFLNIVTNKQKVDINVTPDKRQIFLENENSLIDFILQTLNQLF-----EDIPSIFDVTPLNQTLFKINEEEFPQNEGLKRFLTNSDSDEPTKKQKIMNSFFSESVASNQEDVCLEVLHEKDQFED 347
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BLAST of EMLSAG00000011595 vs. SwissProt
Match: gi|75249525|sp|Q941I6.1|PMS1_ARATH (RecName: Full=DNA mismatch repair protein PMS1; AltName: Full=Postmeiotic segregation protein 1; AltName: Full=Protein POSTMEIOTIC SEGREGATION 1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.549e-11
Identity = 31/88 (35.23%), Postives = 49/88 (55.68%), Query Frame = 0 
Query:    8 PDPTLCRSTNDRCFVYVNDRPVEMPKLSRLLKKYLCDAKKKSYPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKLVEAKLKELY 95
            P     R+  DR + ++N RPV+MPK+S+L+ +   D   + YP+ ++   VP    D NV P K+ VFF  E S++  +   L E+Y
Sbjct:  261 PGQGTGRNLADRQYFFINGRPVDMPKVSKLVNELYKDTSSRKYPVTILDFIVPGGACDLNVTPDKRKVFFSDETSVIGSLREGLNEIY 348
[Close]
BLAST of EMLSAG00000011595 vs. SwissProt
Match: gi|74854421|sp|Q54QA0.1|PMS1_DICDI (RecName: Full=Mismatch repair endonuclease pms1)

HSP 1 Score: 66.2402 bits (160), Expect = 4.494e-10
Identity = 32/85 (37.65%), Postives = 50/85 (58.82%), Query Frame = 0 
Query:   12 LCRSTNDRCFVYVNDRPVEMPKLSRLLKK-YLCDAKKKSYPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKLVEAKLKELY 95
            L RS  DR F +VN RP E  KL++ +   Y    K+ SYP+ +  I +P  + D NV P K+T+F ++E+ +L L+   LK ++
Sbjct:  289 LSRSCADRQFFFVNSRPFEHSKLAKEINSLYQSFHKRGSYPVVIFNIEMPTNNYDVNVTPDKRTIFIQKEQQLLLLITDGLKTMW 373
[Close]
BLAST of EMLSAG00000011595 vs. SwissProt
Match: gi|1709684|sp|P54280.1|PMS1_SCHPO (RecName: Full=DNA mismatch repair protein pms1)

HSP 1 Score: 55.4546 bits (132), Expect = 8.497e-7
Identity = 24/81 (29.63%), Postives = 48/81 (59.26%), Query Frame = 0 
Query:   14 RSTNDRCFVYVNDRPVEMPKLSRLLKKYLCDAKKKSYPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKLVEAKLKEL 94
            R++N+R  +++N R V +PK++R++++          P   + + +    ID NV P KK+VF  +E+SI++ ++  L+ L
Sbjct:  250 RASNERQMLFINRRLVNLPKIARVIQEVFKPYSMAQSPFFAINLRITNGTIDINVSPDKKSVFLSEEDSIIEFIKNSLQNL 330
[Close]
BLAST of EMLSAG00000011595 vs. Select Arthropod Genomes
Match: gb|EEC00172.1| (DNA mismatch repair protein, putative [Ixodes scapularis])

HSP 1 Score: 64.3142 bits (155), Expect = 6.703e-10
Identity = 29/75 (38.67%), Postives = 47/75 (62.67%), Query Frame = 0 
Query:   14 RSTNDRCFVYVNDRPVEMPKLSRLLKKYLCDA-KKKSYPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKLV 87
            RS++DR F+++N RP E+PK+ RLL   +     +  YP   + I++  +D+D NV P K++VF   E+ +L LV
Sbjct:  273 RSSSDRQFIFINSRPCELPKVKRLLVNAVYHTFNRDQYPFLFINIHLQRRDVDVNVTPDKRSVFLHHEKHLLALV 347
[Close]
BLAST of EMLSAG00000011595 vs. Select Arthropod Genomes
Match: EFX72573.1 (putative MLH2, MutL protein 2 [Daphnia pulex])

HSP 1 Score: 64.3142 bits (155), Expect = 7.577e-10
Identity = 32/95 (33.68%), Postives = 57/95 (60.00%), Query Frame = 0 
Query:    5 KTVPDPTLCRSTNDRCFVYVNDRPV---EMPKLSRLLKKYLCDAKKKS--YPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKLVEAKLKEL 94
            +T P     R+  DRCF ++N RPV   ++ KL + L  ++ D  +KS  YPI +V++  P  ++D NVEP+K  V  K++  +L+L+  ++ ++
Sbjct:  246 RTAPLDICYRNRPDRCFTFINQRPVISKDIEKLMKELYGFIRDGDQKSAVYPIFIVSLQFPGDEVDVNVEPNKTKVLMKRQGDVLELIRKRVSDI 340
[Close]
BLAST of EMLSAG00000011595 vs. Select Arthropod Genomes
Match: gb|KFM76960.1| (Mismatch repair endonuclease PMS2, partial [Stegodyphus mimosarum])

HSP 1 Score: 62.7734 bits (151), Expect = 1.594e-9
Identity = 27/82 (32.93%), Postives = 47/82 (57.32%), Query Frame = 0 
Query:   14 RSTNDRCFVYVNDRPVEMPKLSRLLKKYLCDAKKKSYPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKLVEAKLKELY 95
            RST DR F ++N RP ++PK+++L+ +      +  YP   V I++     D NV P K+ +F   E+ +L +V+  L ++Y
Sbjct:  273 RSTTDRQFFFINGRPCDLPKVAKLINEVYHSFNRHQYPFVFVNISLIEGSADVNVTPDKRQIFIPNEKLLLAIVKTSLLQMY 354
[Close]
BLAST of EMLSAG00000011595 vs. Select Arthropod Genomes
Match: gb|EFA00116.2| (Mismatch repair endonuclease PMS2-like Protein [Tribolium castaneum])

HSP 1 Score: 58.9214 bits (141), Expect = 3.537e-8
Identity = 29/82 (35.37%), Postives = 45/82 (54.88%), Query Frame = 0 
Query:   14 RSTNDRCFVYVNDRPVEMPKLSRLLKKYLCDAKKKSYPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKLVEAKLKELY 95
            RSTNDR F Y+N RP +  K++RL+ +         YP   + I      +D NV P K+ VF ++E+ +L  ++A L E +
Sbjct:  275 RSTNDRQFFYINSRPCDPSKVARLVNEIYKQYNNNQYPFVYLNITSKSSLVDVNVTPDKRQVFLEKEKVLLSTIKASLIEAF 356
[Close]
BLAST of EMLSAG00000011595 vs. Select Arthropod Genomes
Match: gb|KPM08169.1| (mismatch repair endonuclease PMS2-like protein [Sarcoptes scabiei])

HSP 1 Score: 57.3806 bits (137), Expect = 9.996e-8
Identity = 28/94 (29.79%), Postives = 52/94 (55.32%), Query Frame = 0 
Query:    2 WVSKTVPDPTLCRSTNDRCFVYVNDRPVEMPKLSRLLKKYLCDAKKKSYPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKLVEAKLKELY 95
            ++SK  PD    RS++DR + Y+N R  ++P LSR + K      +  YP  L+ I +  K ID N+ P K+TV       +++ +++  ++++
Sbjct:  261 FISK--PDHGCGRSSSDRQYFYLNGRVCDLPMLSRQINKVYRTFNRNQYPFVLLRIEIDEKLIDRNLSPDKRTVILADNHQLVQTIQSSCEKMF 352
[Close]
BLAST of EMLSAG00000011595 vs. nr
Match: gi|937904462|dbj|BAS79516.1| (Os02g0592300, partial [Oryza sativa Japonica Group])

HSP 1 Score: 85.5001 bits (210), Expect = 4.349e-14
Identity = 38/102 (37.25%), Postives = 60/102 (58.82%), Query Frame = 0 
Query:    8 PDPTLCRSTNDRCFVYVNDRPVEMPKLSRLLKKYLCDAKKKSYPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKLVEAKLKELYCNEKIEDSFHILED 109
            P P   R++ DR F YVN RPV+MPK+S+L+ +    +  K YP+A++   +P    D NV P K+ +FF  E +IL  +   ++ LYC ++   S + +ED
Sbjct:  253 PGPGSGRNSGDRQFFYVNGRPVDMPKVSKLVNELYRSSNAKQYPVAVLNFCIPTTSYDVNVAPDKRKIFFSSEHAILLSLREGIENLYCPQQCSFSINSVED 354
[Close]
BLAST of EMLSAG00000011595 vs. nr
Match: gi|1002246961|ref|XP_015627647.1| (PREDICTED: DNA mismatch repair protein PMS1 isoform X3 [Oryza sativa Japonica Group])

HSP 1 Score: 85.5001 bits (210), Expect = 8.731e-14
Identity = 38/102 (37.25%), Postives = 60/102 (58.82%), Query Frame = 0 
Query:    8 PDPTLCRSTNDRCFVYVNDRPVEMPKLSRLLKKYLCDAKKKSYPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKLVEAKLKELYCNEKIEDSFHILED 109
            P P   R++ DR F YVN RPV+MPK+S+L+ +    +  K YP+A++   +P    D NV P K+ +FF  E +IL  +   ++ LYC ++   S + +ED
Sbjct:  253 PGPGSGRNSGDRQFFYVNGRPVDMPKVSKLVNELYRSSNAKQYPVAVLNFCIPTTSYDVNVAPDKRKIFFSSEHAILLSLREGIENLYCPQQCSFSINSVED 354
[Close]
BLAST of EMLSAG00000011595 vs. nr
Match: gi|1002246957|ref|XP_015627645.1| (PREDICTED: DNA mismatch repair protein PMS1 isoform X1 [Oryza sativa Japonica Group])

HSP 1 Score: 85.1149 bits (209), Expect = 1.136e-13
Identity = 38/102 (37.25%), Postives = 60/102 (58.82%), Query Frame = 0 
Query:    8 PDPTLCRSTNDRCFVYVNDRPVEMPKLSRLLKKYLCDAKKKSYPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKLVEAKLKELYCNEKIEDSFHILED 109
            P P   R++ DR F YVN RPV+MPK+S+L+ +    +  K YP+A++   +P    D NV P K+ +FF  E +IL  +   ++ LYC ++   S + +ED
Sbjct:  253 PGPGSGRNSGDRQFFYVNGRPVDMPKVSKLVNELYRSSNAKQYPVAVLNFCIPTTSYDVNVAPDKRKIFFSSEHAILLSLREGIENLYCPQQCSFSINSVED 354
[Close]
BLAST of EMLSAG00000011595 vs. nr
Match: gi|1002246959|ref|XP_015627646.1| (PREDICTED: DNA mismatch repair protein PMS1 isoform X2 [Oryza sativa Japonica Group] >gi|50726475|dbj|BAD34084.1| putative PMS2 postmeiotic segregation increased 2 [Oryza sativa Japonica Group] >gi|113536823|dbj|BAF09206.1| Os02g0592300 [Oryza sativa Japonica Group] >gi|218191082|gb|EEC73509.1| hypothetical protein OsI_07875 [Oryza sativa Indica Group] >gi|222623151|gb|EEE57283.1| hypothetical protein OsJ_07338 [Oryza sativa Japonica Group] >gi|937904461|dbj|BAS79515.1| Os02g0592300 [Oryza sativa Japonica Group])

HSP 1 Score: 85.1149 bits (209), Expect = 1.183e-13
Identity = 38/102 (37.25%), Postives = 60/102 (58.82%), Query Frame = 0 
Query:    8 PDPTLCRSTNDRCFVYVNDRPVEMPKLSRLLKKYLCDAKKKSYPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKLVEAKLKELYCNEKIEDSFHILED 109
            P P   R++ DR F YVN RPV+MPK+S+L+ +    +  K YP+A++   +P    D NV P K+ +FF  E +IL  +   ++ LYC ++   S + +ED
Sbjct:  253 PGPGSGRNSGDRQFFYVNGRPVDMPKVSKLVNELYRSSNAKQYPVAVLNFCIPTTSYDVNVAPDKRKIFFSSEHAILLSLREGIENLYCPQQCSFSINSVED 354
[Close]
BLAST of EMLSAG00000011595 vs. nr
Match: gi|573919663|ref|XP_006647441.1| (PREDICTED: DNA mismatch repair protein PMS1 [Oryza brachyantha])

HSP 1 Score: 83.5741 bits (205), Expect = 4.072e-13
Identity = 43/141 (30.50%), Postives = 73/141 (51.77%), Query Frame = 0 
Query:    8 PDPTLCRSTNDRCFVYVNDRPVEMPKLSRLLKKYLCDAKKKSYPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKLVEAKLKELYCNEKIEDSFHILEDKVVETQRVENNKDH--FIVREYQKHTLENSDWNAQSKSD 146
            P P   R++ DR F YVN RPV++PK+S+L+ +    +  K YP+A++   +P    D NV P K+ +FF  E++IL  +   ++ +YC ++   S + +ED   E        D    ++ +      EN D   ++ SD
Sbjct:  253 PGPGSGRNSGDRQFFYVNGRPVDVPKVSKLVNELYRSSNAKQYPVAVLNFCIPTTSYDVNVAPDKRKIFFSSEQTILLSLREGIENMYCPQQCSFSINNIEDPEKEMDPAIGGSDENMCLIEKENVSATENDDHMDETDSD 393
[Close]
BLAST of EMLSAG00000011595 vs. nr
Match: gi|944064537|gb|KQK00128.1| (hypothetical protein BRADI_3g47472 [Brachypodium distachyon])

HSP 1 Score: 82.4185 bits (202), Expect = 8.230e-13
Identity = 36/102 (35.29%), Postives = 61/102 (59.80%), Query Frame = 0 
Query:    8 PDPTLCRSTNDRCFVYVNDRPVEMPKLSRLLKKYLCDAKKKSYPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKLVEAKLKELYCNEKIEDSFHILED 109
            P P   R++ DR F YVN RPV+MPK+++L+ +    +  K YP+A++   +P    D NV P K+ +FF  E++IL  +   ++ LY  ++   S +++ED
Sbjct:  252 PGPGSGRNSGDRQFFYVNGRPVDMPKVTKLVNELYKSSNSKQYPVAVLNFCIPTTSYDVNVAPDKRKIFFSSEQTILLSLREAIENLYNPQQCSFSINLIED 353
[Close]
BLAST of EMLSAG00000011595 vs. nr
Match: gi|357149874|ref|XP_003575262.1| (PREDICTED: DNA mismatch repair protein PMS1 [Brachypodium distachyon] >gi|944064538|gb|KQK00129.1| hypothetical protein BRADI_3g47472 [Brachypodium distachyon])

HSP 1 Score: 82.4185 bits (202), Expect = 8.611e-13
Identity = 36/102 (35.29%), Postives = 61/102 (59.80%), Query Frame = 0 
Query:    8 PDPTLCRSTNDRCFVYVNDRPVEMPKLSRLLKKYLCDAKKKSYPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKLVEAKLKELYCNEKIEDSFHILED 109
            P P   R++ DR F YVN RPV+MPK+++L+ +    +  K YP+A++   +P    D NV P K+ +FF  E++IL  +   ++ LY  ++   S +++ED
Sbjct:  252 PGPGSGRNSGDRQFFYVNGRPVDMPKVTKLVNELYKSSNSKQYPVAVLNFCIPTTSYDVNVAPDKRKIFFSSEQTILLSLREAIENLYNPQQCSFSINLIED 353
[Close]
BLAST of EMLSAG00000011595 vs. nr
Match: gi|1117509344|ref|XP_019441764.1| (PREDICTED: DNA mismatch repair protein PMS1 [Lupinus angustifolius])

HSP 1 Score: 82.4185 bits (202), Expect = 9.796e-13
Identity = 40/105 (38.10%), Postives = 61/105 (58.10%), Query Frame = 0 
Query:   14 RSTNDRCFVYVNDRPVEMPKLSRLLKKYLCDAKKKSYPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKLVEAKLKELYCNEKIEDSFHILEDKVVETQRVE 118
            RS  DR + +VN RPV+MPK+S+LL +    A  K YPIA+++  VP +  D NV P K+ +F  +E SIL+ +   L+++Y    +  S + +E    E   VE
Sbjct:  259 RSLGDRQYFFVNGRPVDMPKVSKLLNEIYKGANSKQYPIAILSFTVPTRAYDVNVTPDKRKIFISEESSILQALREGLQKVYSPSDVFYSVNKVEQPAAEEDSVE 363
[Close]
BLAST of EMLSAG00000011595 vs. nr
Match: gi|1070992293|gb|OEL37104.1| (DNA mismatch repair protein PMS1 [Dichanthelium oligosanthes])

HSP 1 Score: 82.0333 bits (201), Expect = 1.054e-12
Identity = 43/133 (32.33%), Postives = 74/133 (55.64%), Query Frame = 0 
Query:    8 PDPTLCRSTNDRCFVYVNDRPVEMPKLSRLLKKYLCDAKKKSYPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKLVEAKLKELYCNEKIEDSFHILED--KVVETQRVENNKDHFIVREYQKHTLENSD 138
            P P   R++ DR F YVN RPV+MPK+++L+ +    +  K YP+A++   +P    D NV P K+ +FF  E +IL+ +   ++ LY  ++   S + +ED  K  +T    +N+D  ++      + +NSD
Sbjct:  261 PGPGTGRNSGDRQFFYVNGRPVDMPKVTKLVNELYRSSNAKQYPVAILDFRIPTTSYDVNVAPDKRKIFFSSESTILQSLREAVENLYSPQQCSFSINHVEDPEKKEDTVTDGHNEDTNLIAAENVSSPDNSD 393
[Close]
BLAST of EMLSAG00000011595 vs. nr
Match: gi|1102713993|gb|OIW12713.1| (hypothetical protein TanjilG_24646 [Lupinus angustifolius])

HSP 1 Score: 82.0333 bits (201), Expect = 1.096e-12
Identity = 40/105 (38.10%), Postives = 61/105 (58.10%), Query Frame = 0 
Query:   14 RSTNDRCFVYVNDRPVEMPKLSRLLKKYLCDAKKKSYPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKLVEAKLKELYCNEKIEDSFHILEDKVVETQRVE 118
            RS  DR + +VN RPV+MPK+S+LL +    A  K YPIA+++  VP +  D NV P K+ +F  +E SIL+ +   L+++Y    +  S + +E    E   VE
Sbjct:  259 RSLGDRQYFFVNGRPVDMPKVSKLLNEIYKGANSKQYPIAILSFTVPTRAYDVNVTPDKRKIFISEESSILQALREGLQKVYSPSDVFYSVNKVEQPAAEEDSVE 363
[Close]
BLAST of EMLSAG00000011595 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold470_size172058-snap-gene-0.39 (protein:Tk09902 transcript:maker-scaffold470_size172058-snap-gene-0.39-mRNA-1 annotation:"pms1 protein homolog 1 isoform c")

HSP 1 Score: 83.5741 bits (205), Expect = 5.360e-17
Identity = 85/310 (27.42%), Postives = 139/310 (44.84%), Query Frame = 0 
Query:  265 NNSKEDTINS---KMSTLHSWATGKTMPESPPVGMVV-PLMEGKG-------XKRPNVFKRIQDHHPPKKSRSYGDDSLIKLIKPYH-----QKETIKLHRHEVRVDFDIKKLHSKDCVSKSRHINE-LTVIGKLSDSEIWTGLLNES-IYVLHPSRFREISIYNKLLDAQALNPVE-MPYPMII------DKYREDII---------TLASDSRLSRNGFKV--------SVDGRYLTHSCHSVLSEIDVDDLFHILDIIKKNPTASLAECRSPKIKRFFQKECMKLVSNCPPGINNKE---MLQLYSS 529
            +NS  D + S   K  TL +W+ G+ + +S   G VV P+  G G        KRP + +   +  P K S   GD +L +L  P        K+ +K  R    +   +  L +        H  E   ++GKL+   +W  L +E  + +++  R  E  I+ +LL   AL P E +P+P+ I      D   E ++         +   D R+  NG  V         V+G +L     SV + + +DDL  +L +I+ NP A LA CR  K++ F   E ++++   PPG +  E   +L+L +S
Sbjct:  543 HNSSLDLVQSNRLKQQTLSTWSLGRAVMDS--NGDVVSPVTLGFGKPSSHPLAKRPKLERNGNESKPSKVSSRIGDATLGRLAAPLGTPTLDAKKRLKCVRKFKTIPISVTCLKASSQRPAPDHPKESFRLVGKLAHGGLWIALRDEQELTLMNHHRIEEQEIHLRLLSTYALRPTESLPHPINILIHKHWDPSLEAVLAGLVCNPKTSEVEDERVLLNGLAVKVIQNQDKPVEG-WLVGVSRSV-NFLGIDDLLALLKVIQDNPKADLATCRPRKVQAFLVAEAVRMIRQQPPGRDQAEAERLLELATS 848

HSP 2 Score: 55.4546 bits (132), Expect = 3.531e-8
Identity = 28/85 (32.94%), Postives = 48/85 (56.47%), Query Frame = 0 
Query:   14 RSTNDRCFVYVNDRPVEMPKLSRLLKKYL---CDAKKKSYPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKLVEAKLKELY 95
            RST D+ FV+VN RPVE   + R+LK+      D K   +PI ++ + +   ++D N++P+K +V  + E  I++ +   L   Y
Sbjct:  259 RSTADKSFVFVNRRPVEHRSILRVLKQTFSRAADLKTDKFPICVLVLEIEPNEVDVNLDPNKYSVLLRSEAEIVQSLSTSLTVHY 343
[Close]
BLAST of EMLSAG00000011595 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold857_size87770-snap-gene-0.19 (protein:Tk01662 transcript:maker-scaffold857_size87770-snap-gene-0.19-mRNA-1 annotation:"predicted protein")

HSP 1 Score: 57.3806 bits (137), Expect = 7.287e-9
Identity = 25/82 (30.49%), Postives = 47/82 (57.32%), Query Frame = 0 
Query:   14 RSTNDRCFVYVNDRPVEMPKLSRLLKKYLCDAKKKSYPIALVTINVPIKDIDANVEPSKKTVFFKQEESILKLVEAKLKELY 95
            RS+ DR F YVNDRP +  K+S+++        +  YP   + I +P + +D N+ P K+ +  ++E+ +L +++  LK  +
Sbjct:  255 RSSADRQFFYVNDRPCDPSKVSKVVNDTYHLFNRHQYPFVFLNIQLPRESVDVNLTPDKRQLLLEREKYLLAVIQTSLKASF 336
The following BLAST results are available for this feature:
BLAST of EMLSAG00000011595 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 25
Match NameE-valueIdentityDescription
-6.464e-1637.25symbol:OSJNBa0016G10.12 "Putative PMS2 postmeiotic... [more]
-1.622e-1141.46symbol:pms-2 species:6239 "Caenorhabditis elegans"... [more]
-1.622e-1141.46symbol:pms-2 "Protein PMS-2, isoform a" species:62... [more]
-7.078e-1135.23symbol:PMS1 "AT4G02460" species:3702 "Arabidopsis ... [more]
-5.730e-1037.65symbol:pms1 "MutL DNA mismatch repair protein" spe... [more]
-1.480e-735.71symbol:PMS1 species:5476 "Candida albicans" [GO:00... [more]
-2.823e-725.57symbol:PMS1 "Uncharacterized protein" species:9031... [more]
-1.083e-629.63symbol:pms1 "MutL family mismatch-repair protein P... [more]
-1.488e-630.59symbol:PMS1 "Uncharacterized protein" species:9615... [more]
-1.577e-632.14symbol:pms1 "PMS1 postmeiotic segregation increase... [more]

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BLAST of EMLSAG00000011595 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 6
Match NameE-valueIdentityDescription
gi|592903297|gb|GAXK01055078.1|1.113e-525.45TSA: Calanus finmarchicus comp84845_c1_seq1 transc... [more]
gi|592884302|gb|GAXK01074073.1|1.332e-522.93TSA: Calanus finmarchicus comp122315_c0_seq1 trans... [more]
gi|592884301|gb|GAXK01074074.1|1.810e-425.93TSA: Calanus finmarchicus comp122315_c0_seq2 trans... [more]
gi|592930520|gb|GAXK01028025.1|2.703e+039.13TSA: Calanus finmarchicus comp300333_c1_seq2 trans... [more]
gi|592930523|gb|GAXK01028022.1|3.560e+039.13TSA: Calanus finmarchicus comp300333_c0_seq1 trans... [more]
gi|592772173|gb|GAXK01182395.1|8.872e+024.74TSA: Calanus finmarchicus comp1945818_c1_seq1 tran... [more]
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BLAST of EMLSAG00000011595 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAP000000115950.000e+0100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s800:37946... [more]
EMLSAP000000011951.135e-824.39pep:novel supercontig:LSalAtl2s:LSalAtl2s119:44807... [more]
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BLAST of EMLSAG00000011595 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
gi|75249525|sp|Q941I6.1|PMS1_ARATH5.549e-1135.23RecName: Full=DNA mismatch repair protein PMS1; Al... [more]
gi|74854421|sp|Q54QA0.1|PMS1_DICDI4.494e-1037.65RecName: Full=Mismatch repair endonuclease pms1[more]
gi|1709684|sp|P54280.1|PMS1_SCHPO8.497e-729.63RecName: Full=DNA mismatch repair protein pms1[more]
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BLAST of EMLSAG00000011595 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 5
Match NameE-valueIdentityDescription
gb|EEC00172.1|6.703e-1038.67DNA mismatch repair protein, putative [Ixodes scap... [more]
EFX72573.17.577e-1033.68putative MLH2, MutL protein 2 [Daphnia pulex][more]
gb|KFM76960.1|1.594e-932.93Mismatch repair endonuclease PMS2, partial [Stegod... [more]
gb|EFA00116.2|3.537e-835.37Mismatch repair endonuclease PMS2-like Protein [Tr... [more]
gb|KPM08169.1|9.996e-829.79mismatch repair endonuclease PMS2-like protein [Sa... [more]
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BLAST of EMLSAG00000011595 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25
Match NameE-valueIdentityDescription
gi|937904462|dbj|BAS79516.1|4.349e-1437.25Os02g0592300, partial [Oryza sativa Japonica Group... [more]
gi|1002246961|ref|XP_015627647.1|8.731e-1437.25PREDICTED: DNA mismatch repair protein PMS1 isofor... [more]
gi|1002246957|ref|XP_015627645.1|1.136e-1337.25PREDICTED: DNA mismatch repair protein PMS1 isofor... [more]
gi|1002246959|ref|XP_015627646.1|1.183e-1337.25PREDICTED: DNA mismatch repair protein PMS1 isofor... [more]
gi|573919663|ref|XP_006647441.1|4.072e-1330.50PREDICTED: DNA mismatch repair protein PMS1 [Oryza... [more]
gi|944064537|gb|KQK00128.1|8.230e-1335.29hypothetical protein BRADI_3g47472 [Brachypodium d... [more]
gi|357149874|ref|XP_003575262.1|8.611e-1335.29PREDICTED: DNA mismatch repair protein PMS1 [Brach... [more]
gi|1117509344|ref|XP_019441764.1|9.796e-1338.10PREDICTED: DNA mismatch repair protein PMS1 [Lupin... [more]
gi|1070992293|gb|OEL37104.1|1.054e-1232.33DNA mismatch repair protein PMS1 [Dichanthelium ol... [more]
gi|1102713993|gb|OIW12713.1|1.096e-1238.10hypothetical protein TanjilG_24646 [Lupinus angust... [more]

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BLAST of EMLSAG00000011595 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 2
Match NameE-valueIdentityDescription
maker-scaffold470_size172058-snap-gene-0.395.360e-1727.42protein:Tk09902 transcript:maker-scaffold470_size1... [more]
maker-scaffold857_size87770-snap-gene-0.197.287e-930.49protein:Tk01662 transcript:maker-scaffold857_size8... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s800supercontigLSalAtl2s800:379462..382291 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s800-snap-gene-3.52
Biotypeprotein_coding
EvidenceIEA
NoteDNA mismatch repair protein PMS1
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000011595 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000011595EMLSAT00000011595-707442Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s800:379462..382291+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000011595-694361 ID=EMLSAG00000011595-694361|Name=EMLSAG00000011595|organism=Lepeophtheirus salmonis|type=gene|length=2830bp|location=Sequence derived from alignment at LSalAtl2s800:379462..382291+ (Lepeophtheirus salmonis)
TAAGAAGTGACGTCAGAGTTTTCTTTCAATTTGAATGTTACCGCTGAACA
TGAAGCCCCTTCCAGCGGAGACCGTTTCTCTCATATCCACCGGTCAAATC
ATTGTAAGTGTGTATAATGCAGTGAAAGAGCTAATTGAGAATTCTCTGGA
TTCAGAGGCATCAATGGTTCAGGTTGACCTTGAAGACTATGGCTTAGAAA
AGATTCAAGTCCGGGATAATGGAATCGGAGTCCCAGGAATGTAGTTACTT
GTTTATTTCACTCCAGTCTTAATTTATTATAATATTTTTTTTTTTTTGAA
ATTGATGTTAATTTATTTATAGAATCTGACATCCCCCTTATGGTGAAAAA
TCATTATACCTCCAAAATAATTGGATTTAATGACTTGGAATCTCTTCAAA
CCTATGGTTTTCGTGGCGAGGCTCTCCATGCAATTCTTGAATCTTCAGAT
GAACTCCAAATTTTATCTCGATTTCGAGGTGCATCCATGGGCTCTTCGTT
TCTATTTGATTCCAAAGGAAACATAATAAAAAAATAGCAGTCAGGCTATA
GTTTCAGGAACAACTATCACAGTTACAAGACTATTCTCAAAAACTCCAGT
TAGGCGAGAGAGATACACAAAAAGTTCAGCCATGAAAAAAAGCTGATCTC
AAGGATATTGAAACTCTTATTTTGGGATTTTCTCTCTTGCATCCCCACAT
ACGTTTCTTATTATCTTCTCATAAGGTAATCATTTAGCCTTTATCATAAC
AAAGGTTTAATTTAGTCTTATTTCTTTCGTTTTTTTACCTTCCCAATTTC
AGTCCGTAATATTTCAAAGACCTGTGGTTAAAACATTTCAGGATGCGGTT
ATTGCAACATTAGGTAAATCTGTTATTAAAAATTGGGTAAATATCTCTCT
AAATGAGGATGAAGGTGTGCGTGTTGAGATGTGGGTTTCTAAGACTGTCC
CCGACCCCACTTTATGTCGGTCTACCAATGATAGATGTTTTGTATATGTT
AACGATAGGCCAGTAGAAATGCCAAAGCTCTCTCGTCTACTAAAAAAATA
TCTATGTGATGCCAAAAAAAAATCTTATCCCATCGCTCTAGTCACAATAA
ATGTCCCTATAAAGGATATTGATGCTAATGTGGAGCCTAGTAAAAAGACT
GTATTTTTTAAACAAGAGGAATCAATATTGAAGTTGGTTGAAGCGAAATT
GAAAGAACTATATTGCAATGAAAAAATTGAGGATTCTTTCCACATACTTG
AGGATAAAGTCGTCGAAACTCAAAGAGTAGAAAATAATAAAGACCACTTT
ATCGTGCGTGAATATCAGAAACATACTCTTGAGAATTCAGATTGGAATGC
TCAATCAAAGTCGGATGGCATTCTCAAAGCTAAACATGATTCCCATATAA
CTCTAAATACTAAACCTTTATCTTCTGAAAGTATTGGAAATTCAATGCAA
AAGGAAAACTCACCACAAATTACTTCCGTTGATGATGTTGCACTTAGAAA
TTCTACTCTGATTGACAAGCAAACAAAATTCTTTAATTTGTCTTTTGAGA
AAAGTATTGAACATAATATCTCTTCTACTACGCCCAAGAGCAAATCTAAA
AACATAATAGATGACTCTATTATGTCTAAAGATCCTGGATCTCACGATGT
GCTTTTCAAGAACAACTCTTTTATATCATCTACATTAATTGATTCGTCCA
ATAAAAATGCATCATTCGTAAATAATTCGAAAGAAGACACAATCAACTCC
AAAATGTCAACTCTACACTCCTGGGCAACAGGTAAAACTATGCCCGAATC
ACCACCAGTTGGAATGGTTGTTCCTCTTATGGAAGGAAAGGGGYTTAAAA
GGCCTAATGTATTTAAAAGGATTCAAGACCATCATCCTCCTAAGAAATCT
CGTAGTTATGGAGACGATTCTTTAATCAAATTGATAAAACCTTATCATCA
AAAAGAAACGATAAAATTGCATAGACATGAGGTTCGTGTTGATTTTGATA
TAAAAAAATTACATAGTAAAGATTGCGTGAGCAAATCGAGGCATATTAAT
GAATTAACCGTCATTGGTAAATTATCGGATTCTGAAATTTGGACGGGGCT
TTTAAATGAATCAATTTATGTACTTCATCCGTCTAGATTTCGTGAAATAA
GTATTTATAATAAACTACTTGACGCTCAAGCATTAAACCCAGTTGAAATG
CCATACCCGATGATAATAGATAAGTATAGAGAAGACATTATTACGCTTGC
CAGCGATAGCCGTTTAAGCCGTAATGGATTTAAAGTTAGTGTGGATGGCA
GATATTTAACTCACTCTTGTCATAGTGTCTTGTCAGAAATTGATGTCGAT
GATTTATTTCATATCTTGGATATAATAAAAAAGAATCCAACCGCATCTTT
GGCAGAGTGCCGTTCTCCCAAAATTAAGAGATTTTTTCAAAAAGAATGTA
TGAAACTTGTATCAAATTGTCCACCAGGAATAAATAATAAAGAAATGCTA
CAATTGTATTCGTCTTCCTTGAAGTATTTTAAAAACATTGCTCAAGAGAC
TTGCTTTCATCGAAAAAAAGTCATGCTCAAAATATATGATTACAAAGACC
TATAATATATTGTATTAATTATATGTTTGTTATATTTTTGTATATTTTAT
ATTGTAAAACTGATGTTGAGGACTAATATGTATATTTTTGTGGATAATAA
ATGTATTAAAAATATTATAGATAAGATNNTTTAATCATACGTAAGCGGAA
ATGAATTAAGTATTGTCATAAATTTTTATAAATCTTCCTTGGATCTGAAA
CAATGGGTACATAAAACACGTCATTTGTTA
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