EMLSAG00000012741, EMLSAG00000012741-695507 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000012741 vs. L. salmonis peptides
Match: EMLSAP00000012741 (pep:novel supercontig:LSalAtl2s:LSalAtl2s967:28852:32667:-1 gene:EMLSAG00000012741 transcript:EMLSAT00000012741 description:"snap-LSalAtl2s967-processed-gene-0.100") HSP 1 Score: 592.423 bits (1526), Expect = 0.000e+0 Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0 Query: 1 MEESCMVQMLFTSREKSQNHKYRNRPRVKFFTLIDMFDKKINHLGDDERLLKKDTHKEREGEKEGKMKKSTLKQEILRHDSQMEQLSKEDKIENLTDIKKKLSKSNLPKGINENSNEDYIILSELSTQDLVPTILYGLKVNSDLTYSIFSKGLPLPIIEIKHICSSKHLSRFSDVNKILSYLKNRSDESKQASNIKYAIELLEESLYQQDFYSQNHLGFLIEQLHLHSVSAKGRRYSPEFLGISTLWHNTSPALYNQIRESGMIYMPTESRIRRITNSKEEYQAQPWTI 289 MEESCMVQMLFTSREKSQNHKYRNRPRVKFFTLIDMFDKKINHLGDDERLLKKDTHKEREGEKEGKMKKSTLKQEILRHDSQMEQLSKEDKIENLTDIKKKLSKSNLPKGINENSNEDYIILSELSTQDLVPTILYGLKVNSDLTYSIFSKGLPLPIIEIKHICSSKHLSRFSDVNKILSYLKNRSDESKQASNIKYAIELLEESLYQQDFYSQNHLGFLIEQLHLHSVSAKGRRYSPEFLGISTLWHNTSPALYNQIRESGMIYMPTESRIRRITNSKEEYQAQPWTI Sbjct: 1 MEESCMVQMLFTSREKSQNHKYRNRPRVKFFTLIDMFDKKINHLGDDERLLKKDTHKEREGEKEGKMKKSTLKQEILRHDSQMEQLSKEDKIENLTDIKKKLSKSNLPKGINENSNEDYIILSELSTQDLVPTILYGLKVNSDLTYSIFSKGLPLPIIEIKHICSSKHLSRFSDVNKILSYLKNRSDESKQASNIKYAIELLEESLYQQDFYSQNHLGFLIEQLHLHSVSAKGRRYSPEFLGISTLWHNTSPALYNQIRESGMIYMPTESRIRRITNSKEEYQAQPWTI 289
BLAST of EMLSAG00000012741 vs. L. salmonis peptides
Match: EMLSAP00000002813 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1623:25369:26680:-1 gene:EMLSAG00000002813 transcript:EMLSAT00000002813 description:"snap-LSalAtl2s1623-processed-gene-0.12") HSP 1 Score: 128.257 bits (321), Expect = 2.020e-34 Identity = 84/203 (41.38%), Postives = 114/203 (56.16%), Query Frame = 0 Query: 37 FDKKINHLGDDERLLKKDTHKEREGEKEGKMKKSTLKQEILRHDSQMEQLSKEDKIENLTDIKKKLSKSNLPKGINENSNEDYIILSELSTQDLVPTILYGLKVNSDLTYSIFSKGLPLPIIEIKHICSSKHLSRFSDVNKILSYLKNRSDESKQASNIKYAIELLEESLYQQDFYSQNHLGFLIEQLHLHSVSAKGRRYSPE 239 FD D + L+K T E K+ +Q+ LR +SQ+E+LS+ED+I+NLTDIKK L K LPKGIN NED++I LS+QDLVP IL GLKVN+D+ + F KG + ++ KI ++ + K +E+LEE+ + QDF S N + F+IEQLHLH VS KGR YSP+ Sbjct: 24 FDAVPTVFPDIPKNLRKQTFPESITTLSTYTKR--FEQDKLRLNSQIERLSQEDEIKNLTDIKKTLGKPCLPKGINVIYNEDFVIFFALSSQDLVPYILLGLKVNNDIFLNFF-KG-----------------TSYTYCRKI----------TQTSFKHKVCLEILEEAAHHQDFNSINPICFIIEQLHLHFVSVKGRGYSPK 196
BLAST of EMLSAG00000012741 vs. L. salmonis peptides
Match: EMLSAP00000011819 (pep:novel supercontig:LSalAtl2s:LSalAtl2s828:111658:113315:1 gene:EMLSAG00000011819 transcript:EMLSAT00000011819 description:"maker-LSalAtl2s828-augustus-gene-1.13") HSP 1 Score: 96.6709 bits (239), Expect = 6.987e-25 Identity = 53/109 (48.62%), Postives = 66/109 (60.55%), Query Frame = 0 Query: 148 IFSKGLPLPIIEIKHICSSKHLSRFSDVNKILSYLKNRSDESKQASNIKYAIELLEESLYQQDFYSQNHLGFLIEQLHLHSVSAKGRRYSPEFLGISTLWHNTSPALYN 256 +FS G P E+ HICSS + RFSD+N IL+YLKNR +S SNI A LLE +L + +H+ F+IEQLHLH K +RYS L ISTLW N P + N Sbjct: 1 MFSDGAPALFKEVNHICSSAFIQRFSDINNILAYLKNRYVQSS-ISNISIAKALLESTLEESS--HNDHINFIIEQLHLHLSCIKDKRYSSRLLEISTLWQNIPPYIIN 106
BLAST of EMLSAG00000012741 vs. L. salmonis peptides
Match: EMLSAP00000009597 (pep:novel supercontig:LSalAtl2s:LSalAtl2s617:147807:148969:-1 gene:EMLSAG00000009597 transcript:EMLSAT00000009597 description:"maker-LSalAtl2s617-augustus-gene-1.41") HSP 1 Score: 75.8702 bits (185), Expect = 5.959e-16 Identity = 60/223 (26.91%), Postives = 110/223 (49.33%), Query Frame = 0 Query: 78 RHDSQMEQLSKEDK-------IENLTDIKKKLSKSNLPKGINENSNED--YII---LSELSTQDLVPTILYGLKVNSDLTYSIFSKGLPLPIIEIKHICSSKHLSRFSDVNKILSYLKNR-SDESKQASNIKYAIELLEESLYQQDFYSQNHLGFLIEQLHLHSVSAK-GRRYSPEFLGISTLWHNTSPALYNQIRESGMIYMPTESRIRRITNSKEEYQAQP 286 RH Q+E+L+ + K I++L D++KKL K+ LP ++ E Y+I +S+ TQ+L + L++N DL+++ G L HI + +V ++++LK+ D ++ + A +++E + + L FL EQL L + K RRYS + I++ W TSP LY + + ++ +P E ++++ NS +P Sbjct: 126 RHQRQLERLNTQAKEFYQKNNIQSLDDLEKKLGKATLPSQVSMIKQEGKLYLITIGMSKFGTQELS----FSLEINEDLSFTACVNGFKLKKNRFGHILKTNTFEHLFEVINLVAFLKSTDCDVEDKSKVLGKACKIIESVIPDFKEKEKKSLSFLNEQLSLCVIPYKQSRRYSSSLISIASNWKETSPKLYRKFLQEDLLSLPCERYLKQL-NSNNPLPTKP 343
BLAST of EMLSAG00000012741 vs. L. salmonis peptides
Match: EMLSAP00000001188 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1197:88914:90666:-1 gene:EMLSAG00000001188 transcript:EMLSAT00000001188 description:"snap-LSalAtl2s1197-processed-gene-0.49") HSP 1 Score: 73.559 bits (179), Expect = 7.935e-16 Identity = 39/82 (47.56%), Postives = 54/82 (65.85%), Query Frame = 0 Query: 78 RHDSQMEQLSKEDKIENLTDIKKKLSKSNLPKGINENSNEDYIILSELSTQDLVPTILYGLKVNSDLTYSIFSKGLPLPIIE 159 R ++++ Q KED I + +IK+K S P+GI+E SNE+Y I LS +DL TILYG KV++D +YSIF+ PL IE Sbjct: 137 RLNNRIRQSLKEDVITKMKNIKEKRDCSCFPEGIHEISNEEYTIYFALSKEDLSSTILYGWKVDNDFSYSIFANSFPLSNIE 218
BLAST of EMLSAG00000012741 vs. L. salmonis peptides
Match: EMLSAP00000008076 (pep:novel supercontig:LSalAtl2s:LSalAtl2s47:287231:290661:-1 gene:EMLSAG00000008076 transcript:EMLSAT00000008076 description:"augustus-LSalAtl2s47-processed-gene-3.11") HSP 1 Score: 76.6406 bits (187), Expect = 8.431e-16 Identity = 50/189 (26.46%), Postives = 100/189 (52.91%), Query Frame = 0 Query: 88 KEDKIENLTDIKKKLSKSNLPKGINENSNEDYIILSELSTQDLVPTILYGLKVNSDLTYSIFSKGLPLPIIEIKHICSSKHLSRFSDVNKILSYLKNRSDESKQASNIKYAIELLEESLYQQDFYSQNHLGFLIEQLHLHSVSAKGRRYSPEFLGISTLWHNTSPALYNQIRESGMIYMPTESRIRRIT 276 +E +I +L DIKKK+ S+LP G + +D ++ + + +P I L++ +LT+ + ++ + + HIC S+ + S V ++++ K+ S + S ++ +L +++ + Q + F+ EQL L S + R++S +FL + LW + SP+LY ++ MP+ S +R +T Sbjct: 138 EEKEILSLLDIKKKIKLSHLPSGTHLIKRKDNLLFCFI--EGTIPQIHQSLQIFDNLTFKLCNQNTIITQDKYNHICQSEKIETVSQVQNLIAFAKSLSIDITAKSKLEQCTTVLSTIENEENNF-QRKIDFIAEQLDLLSKPERTRQFSIQFLAMCILWESCSPSLYKRLVYEDCFCMPSISYLRNLT 323
BLAST of EMLSAG00000012741 vs. L. salmonis peptides
Match: EMLSAP00000004011 (pep:novel supercontig:LSalAtl2s:LSalAtl2s214:83119:84574:1 gene:EMLSAG00000004011 transcript:EMLSAT00000004011 description:"snap_masked-LSalAtl2s214-processed-gene-1.9") HSP 1 Score: 72.7886 bits (177), Expect = 4.495e-15 Identity = 49/154 (31.82%), Postives = 85/154 (55.19%), Query Frame = 0 Query: 90 DKIENLTDIKKKLSKSNLPKGINENS-NEDYIILS-ELSTQDLVPTILYGLKVNSDLTYSIFSKGLPLPIIEIKHICSSKHLSRFSDVNKILSYLKNRSDESKQASNIKYAIELLEESLYQQDFYSQNHLGFLIEQLHLHSVSAKGRRYSPEFL 241 D+++++ ++ +K + N+P GI+E S N + + LS + Q+ I + LKV +L ++ + + +P+ +++HIC ++ S V +LSYLK+ + K I A+ELLE + Q H+ F+IEQL L + K RRYS L Sbjct: 138 DRVDSIRELLEKFDRRNIPSGIDEISRNNEMMFLSFDWENQE----IRFSLKVQENLKIQLYHQTMQIPLSDVRHICKESKITATSQVGSLLSYLKSLTCSKKLI--INKAVELLESVVLDQ-VSEVRHVDFIIEQLKLAFTTLKQRRYSQGLL 284
BLAST of EMLSAG00000012741 vs. L. salmonis peptides
Match: EMLSAP00000005372 (pep:novel supercontig:LSalAtl2s:LSalAtl2s28:136065:140303:1 gene:EMLSAG00000005372 transcript:EMLSAT00000005372 description:"maker-LSalAtl2s28-snap-gene-1.60") HSP 1 Score: 71.633 bits (174), Expect = 3.682e-14 Identity = 58/213 (27.23%), Postives = 111/213 (52.11%), Query Frame = 0 Query: 79 HDSQMEQLSKEDKIENLTDIKKKLSKSNLPKGIN--ENSNEDYIILSELSTQDLVPTILYGLKVNSDLTYSIFSKGLPLPIIEIKHICSSKHLSRFSDVNKILSYLKNRSDESKQAS--------NIKYAIELLEESLYQQDFYSQNHLGFLIEQLHLHSVSAKGRRYSPEFLGISTLWHNTSPALYNQIRESGMIYMPTESRIRRITNSKEE 281 H+ + E+ + D+I ++ D + K+ K+ LP G+ ++ Y L +D I + L++ + Y+ F G+ + +IK ++K +++ S++ +L YLK++S+ +S N++ IE+ +E S+ L FL EQ L + +K +YS L ++ +WH +P LY QIR+ G++ +P+ S +RR T+ E Sbjct: 203 HNIKKEKWEEGDEIVSMYDFEYKIEKAQLPSGVKIFRKDSKYYFYLPNFQ-EDGNAKIGFSLELLDNFKYNAFVNGIKILRDDIKLSFNAK-ITKISELILLLEYLKSKSEGMPNSSFLICQAKKNLEKCIEISDEG--HSSLISK--LLFLKEQCDL--LLSKSHKYSDSLLSVALMWHQQAPTLYEQIRKDGVMTLPSASHLRRFTSFNAE 407
BLAST of EMLSAG00000012741 vs. L. salmonis peptides
Match: EMLSAP00000012721 (pep:novel supercontig:LSalAtl2s:LSalAtl2s965:308987:310501:-1 gene:EMLSAG00000012721 transcript:EMLSAT00000012721 description:"augustus-LSalAtl2s965-processed-gene-3.12") HSP 1 Score: 70.4774 bits (171), Expect = 6.389e-14 Identity = 52/196 (26.53%), Postives = 103/196 (52.55%), Query Frame = 0 Query: 89 EDKIENLTDIKKKLSKSNLPKGINENSNEDYIILSELSTQDLVPTILYGLKVNSDLTYSIFSKGLPLPIIEIKHICSSKHLSRFSDVNKILSYLKN-RSDESKQASNIKYAIELLEESLYQQDFYSQNHL-----GFLIEQLHLHSVSAKGRRYSPEFLGISTLWHNTSPALYNQIRESGMIYMPTESRIRRITNS 278 ED+I++ ++ KLS LP + +D ++ LS + + V DL++ ++SK + + + H+ S+K + S + K+L+Y+ + +S E +++ N AI L+ + +Q +Q L F+I+QL + V RRY+PE L + +W+N SP LY +++E ++ +P + + ++ S Sbjct: 270 EDRIDSYDELIVKLSSECLPPNVILKKLDDRLLFYSLSYDRGPVQPYFTVIVKLDLSFELYSKEIFIDNNAVNHLTSNK-IKSVSSLLKVLAYMNSFKSLELEKSVN--EAINTLKVVIDKQHATNQQKLTRKKLNFIIQQLEILEVKPSRRRYTPELLATAMIWNNISPVLYKKLQEDQVLTLPLQKHLSKLAKS 462
BLAST of EMLSAG00000012741 vs. L. salmonis peptides
Match: EMLSAP00000002470 (pep:novel supercontig:LSalAtl2s:LSalAtl2s147:30711:37893:-1 gene:EMLSAG00000002470 transcript:EMLSAT00000002470 description:"maker-LSalAtl2s147-augustus-gene-0.11") HSP 1 Score: 61.6178 bits (148), Expect = 7.874e-11 Identity = 63/195 (32.31%), Postives = 93/195 (47.69%), Query Frame = 0 Query: 92 IENLTDIKKKLSKSNLPKGINENSNED---YIILSELSTQDLVPTILYGLKVNSDLTYSIFSKGLPLPIIEIKHICSSK--HLSRFSDVNKILSYLKNRSDESKQASN----------IKYAIELLEESLYQQDFYSQNHLGFLIEQLH--LHSVSAKGRRYSPEFLGISTLWHNTSPALYNQIR---ESGMIYM 266 +E++ D KKL S LPK + S E + + + P I Y L V SDLTYS+ + +I+ +++C S H+S F +N L+ LKN ESK IK ++ LL ES ++ N L F++EQL LHS +YS + + LW+N +P LY + ES M+ M Sbjct: 1227 LEDIQDELKKLGHSTLPKDVFVISKEGESLHFLGLTFDKSSIAPKINYSLNVFSDLTYSMM---VGEQMIQ-ENLCKSSRSHISSFMALNDALNLLKNSFLESKPHKGTKELEMTLIRIKKSVSLLPESDKRR-----NKLLFILEQLDCILHS----REKYSKSLIMLGVLWNNVAPRLYRSLSNSYESEMLLM 1408
BLAST of EMLSAG00000012741 vs. Select Arthropod Genomes
Match: gb|KFM60107.1| (Transposable element P transposase, partial [Stegodyphus mimosarum]) HSP 1 Score: 63.929 bits (154), Expect = 1.705e-10 Identity = 54/211 (25.59%), Postives = 106/211 (50.24%), Query Frame = 0 Query: 83 MEQLSKEDKIENLTDIKKKL----SKSNLPKGINENSNEDYIILSELSTQDLVPTILYGLKVNSDLTYSIFSKGLPLPIIEIKHICSS-KHLSRFSDVNKILSYLKNRSDESKQASNIKYAIELL----EESLYQ--------QDFYSQNHLGFLIEQLHLHSVSAKGRRYSPEFLGISTLWHNTSPALYNQIRESGMIYMPTESRIRRIT 276 ++Q +D+I++ +D ++L + NL N D++ L L+ P +L +K+N+D++ ++F + +P+ K I ++ HL R+S++ ILS++KN + E+L E+S+Y +D Y F++EQ++L S RRYS E L + + S + Y+ + +SG++ +P+ + +IT Sbjct: 125 LQQFLDKDRIKSFSDFCEQLDLRVNSFNLISKPIVIKNSDHVFLINLNLLS-APRVLSSIKINNDMSLNVFFGDISVPVSHFKIILNNPDHLLRWSELENILSFIKNMQKDDLN--------EVLPSEKEKSVYHWKKCISPDEDMYDNKK--FILEQMNLCDKSKMARRYSSELLIFAYSLYMKSSSCYSLLYDSGLLSVPSTDHLGKIT 324
BLAST of EMLSAG00000012741 vs. nr
Match: gi|675367205|gb|KFM60107.1| (Transposable element P transposase, partial [Stegodyphus mimosarum]) HSP 1 Score: 63.929 bits (154), Expect = 8.342e-8 Identity = 54/211 (25.59%), Postives = 106/211 (50.24%), Query Frame = 0 Query: 83 MEQLSKEDKIENLTDIKKKL----SKSNLPKGINENSNEDYIILSELSTQDLVPTILYGLKVNSDLTYSIFSKGLPLPIIEIKHICSS-KHLSRFSDVNKILSYLKNRSDESKQASNIKYAIELL----EESLYQ--------QDFYSQNHLGFLIEQLHLHSVSAKGRRYSPEFLGISTLWHNTSPALYNQIRESGMIYMPTESRIRRIT 276 ++Q +D+I++ +D ++L + NL N D++ L L+ P +L +K+N+D++ ++F + +P+ K I ++ HL R+S++ ILS++KN + E+L E+S+Y +D Y F++EQ++L S RRYS E L + + S + Y+ + +SG++ +P+ + +IT Sbjct: 125 LQQFLDKDRIKSFSDFCEQLDLRVNSFNLISKPIVIKNSDHVFLINLNLLS-APRVLSSIKINNDMSLNVFFGDISVPVSHFKIILNNPDHLLRWSELENILSFIKNMQKDDLN--------EVLPSEKEKSVYHWKKCISPDEDMYDNKK--FILEQMNLCDKSKMARRYSSELLIFAYSLYMKSSSCYSLLYDSGLLSVPSTDHLGKIT 324 The following BLAST results are available for this feature:
BLAST of EMLSAG00000012741 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000012741 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 0
BLAST of EMLSAG00000012741 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 12
Pagesback to top
BLAST of EMLSAG00000012741 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000012741 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 1
BLAST of EMLSAG00000012741 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 1
BLAST of EMLSAG00000012741 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s967:28852..32667- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000012741-695507 ID=EMLSAG00000012741-695507|Name=EMLSAG00000012741|organism=Lepeophtheirus salmonis|type=gene|length=3816bp|location=Sequence derived from alignment at LSalAtl2s967:28852..32667- (Lepeophtheirus salmonis)back to top Add to Basket
|