cellular retinoic acid-binding protein 2, maker-scaffold25_size650667-snap-gene-0.20 (gene) Tigriopus kingsejongensis

Overview


Name	cellular retinoic acid-binding protein 2
Unique Name	maker-scaffold25_size650667-snap-gene-0.20
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of cellular retinoic acid-binding protein 2 vs. L. salmonis genes
Match: EMLSAG00000004641 (supercontig:LSalAtl2s:LSalAtl2s2426:5738:7142:1 gene:EMLSAG00000004641 transcript:EMLSAT00000004641 description:"maker-LSalAtl2s2426-augustus-gene-0.3")

HSP 1 Score: 150.214 bits (378), Expect = 4.074e-48
Identity = 77/134 (57.46%), Postives = 100/134 (74.63%), Query Frame = 0

Query:    2 SFQGKYQRTSSDNYEEFLKALEVSYLLRKAATVSTPTLEVSEADGVWTFKTSTTLKSMELKFKLGEEFDETTPDGREVKAVVVQEG-NSFISTQTAKKDGQKSTKSVREFKGDEVIQTMEVLGTDIVCTQTFKR 134
            +F GKY R SS+ YE+ LK L V+ LLRKAA VSTP+ EVS+   VW+FKTST  KSMELKF+ G++F+ETT DGR V  +V  +G  +F+S Q AKKDGQKSTK+VR+FK  +  Q  EV+G+D+ CTQ F++
Sbjct:    3 AFMGKYNRISSEKYEDLLKELGVNVLLRKAALVSTPSFEVSKEGEVWSFKTSTVAKSMELKFEXGKKFEETTSDGRTVDTLVTLDGPTTFVSEQMAKKDGQKSTKTVRDFKEGKCTQITEVVGSDVKCTQVFEK 136

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BLAST of cellular retinoic acid-binding protein 2 vs. L. salmonis genes
Match: EMLSAG00000005888 (supercontig:LSalAtl2s:LSalAtl2s319:158357:158776:1 gene:EMLSAG00000005888 transcript:EMLSAT00000005888 description:"augustus_masked-LSalAtl2s319-processed-gene-1.4")

HSP 1 Score: 101.679 bits (252), Expect = 6.681e-29
Identity = 53/135 (39.26%), Postives = 83/135 (61.48%), Query Frame = 0

Query:    3 FQGKYQRTSSDNYEEFLKALEVSYLLRKAATVSTPTLEVSEADGVWTFKTSTTLKSMELKFKLGEEFDETTPDGREVKAVVVQEG-NSFISTQTAKKDGQKSTKSVREFKGD-EVIQTMEVLGTDIVCTQTFKRV 135
            + GKYQR S +N+E  L  L +++ LRKAA  S+P +E+S  +  WT   ST +KS+++ F  G  F+E +PDGR  K VV +EG   +I+ Q A ++G+K    +R+F  D ++I  M  +G D+   Q FK++
Sbjct:    5 YAGKYQRVSEENFESTLNELGLNFFLRKAALFSSPIMEISGKEDKWTIANSTLIKSIKMDFVFGVPFEEVSPDGRRCKTVVRREGLTRWITEQKALEEGKKDVVVIRDFSEDGKIINVMMTVG-DVTSRQKFKKI 138

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BLAST of cellular retinoic acid-binding protein 2 vs. L. salmonis genes
Match: EMLSAG00000004244 (supercontig:LSalAtl2s:LSalAtl2s222:241073:242209:-1 gene:EMLSAG00000004244 transcript:EMLSAT00000004244 description:"snap_masked-LSalAtl2s222-processed-gene-2.5")

HSP 1 Score: 94.7449 bits (234), Expect = 9.240e-27
Identity = 52/98 (53.06%), Postives = 68/98 (69.39%), Query Frame = 0

Query:   27 LLRKAATVSTPTLEVSEADGVWTFKTSTTLKSMELKFKLGEEFDETTPDGREVKAVVVQEG-NSFISTQTAKKDGQKSTKSVREFKGDEVIQTMEVLG 123
            +  + A VSTP+ EVS+   V +FKTST  KSMELKFK+G+EF+ET  DGR V  +V  +G  +F+  QTAK DGQKSTK+VR+ K  +  Q  EV+G
Sbjct:    1 MRNQTALVSTPSFEVSKEGKVSSFKTSTVAKSMELKFKVGKEFEETXSDGRTVDTLVTMDGPTTFVPEQTAKNDGQKSTKTVRDIKDGKCTQVTEVVG 98

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BLAST of cellular retinoic acid-binding protein 2 vs. L. salmonis genes
Match: EMLSAG00000001021 (supercontig:LSalAtl2s:LSalAtl2s116:235262:235669:-1 gene:EMLSAG00000001021 transcript:EMLSAT00000001021 description:"snap-LSalAtl2s116-processed-gene-2.25")

HSP 1 Score: 91.2781 bits (225), Expect = 7.405e-25
Identity = 50/135 (37.04%), Postives = 82/135 (60.74%), Query Frame = 0

Query:    1 MSFQGKYQRTSSDNYEEFLKALEVSYLLRKAATVSTPTLEVSEA-DGVWTFKTSTTLKSMELKFKLGEEFDETTPDGREVKAVVVQEGNSFISTQTAKKDGQKSTKSVREFKGDEVIQTMEVLGTDIVCTQTFKR 134
            +S +G Y+RT SDNY+ FL  + +++L+RKAA +++ TL +S++ +  +TFKT TT+++  L+FK+GE++ ET P   +V      EGN+    Q  +   +K    VREF  + +  TM +    +VC Q F R
Sbjct:    2 VSIEGVYKRTKSDNYDAFLAEIGLNFLIRKAACMASSTLTISKSPEDKYTFKTETTMRTTSLEFKVGEDWVETMPGDNKVNCSATLEGNTLTIIQRPQDAPEKMITIVREFSDEGISVTMTI--EKVVCKQFFTR 134

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BLAST of cellular retinoic acid-binding protein 2 vs. L. salmonis genes
Match: EMLSAG00000009662 (supercontig:LSalAtl2s:LSalAtl2s623:100839:101246:-1 gene:EMLSAG00000009662 transcript:EMLSAT00000009662 description:"augustus_masked-LSalAtl2s623-processed-gene-1.0")

HSP 1 Score: 86.6557 bits (213), Expect = 4.444e-23
Identity = 49/137 (35.77%), Postives = 83/137 (60.58%), Query Frame = 0

Query:    1 MSFQGKYQRTSSDNYEEFLKALEVSYLLRKAATVSTPTLEVSE-ADGVWTFKTSTTLKSMELKFKLGEEFDETTPDGREVKAVVVQEGNSFISTQTAKKDGQKSTKSVREF--KGDEVIQTMEVLGTDIVCTQTFKR 134
            +S +G Y+RT SDNY+ FL  + +++L+RKAA +++ TL +S+ ++G W FKT TT+++ E++F +GE++ ET   G +V      E N+    Q  +    K    VR+F  +G +V  T+E    ++VC Q + R
Sbjct:    2 VSIEGIYKRTKSDNYDAFLAKIGLNFLIRKAACLASATLTISKTSEGKWHFKTETTMRTTEIEFNVGEDWVETMSGGYKVDCSATLEDNTLTIIQKPQDAEGKMITLVRKFSEEGIDVTMTIE----EVVCKQFYTR 134

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BLAST of cellular retinoic acid-binding protein 2 vs. L. salmonis genes
Match: EMLSAG00000009128 (supercontig:LSalAtl2s:LSalAtl2s574:644895:646059:1 gene:EMLSAG00000009128 transcript:EMLSAT00000009128 description:"maker-LSalAtl2s574-augustus-gene-6.28")

HSP 1 Score: 73.1738 bits (178), Expect = 5.876e-18
Identity = 44/134 (32.84%), Postives = 73/134 (54.48%), Query Frame = 0

Query:    1 MSFQGKYQRTSSDNYEEFLKALEVSYLLRKAATVSTPTLEVSEADGVWTFKTSTTLKSMELKFKLGEEFDETTPDGREVKAVVVQEGNSFISTQTAKKDGQKSTKSVREFKGDEVIQTMEVLGTDIVCTQTFKR 134
            ++  G Y   S DN++++L A  V  + R A T S P + V  +   +TF T T LK +++ F LG+E++     GR  K V  ++G++ I+ + +  D    + + R+F  DE+I TM   G  +  T+TFKR
Sbjct:    2 VAMAGTYNFVSQDNFDKYLSASGVGTIHRMAITKSKPDIVVECSGDNYTFTTKTALKDIKISFTLGQEYECDPGTGRVAKYVTTKDGDTLITKEVSDPD----SVATRKFTDDELIMTMTAKG--VTGTRTFKR 129

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BLAST of cellular retinoic acid-binding protein 2 vs. L. salmonis genes
Match: EMLSAG00000012827 (supercontig:LSalAtl2s:LSalAtl2s979:205282:205689:1 gene:EMLSAG00000012827 transcript:EMLSAT00000012827 description:"augustus_masked-LSalAtl2s979-processed-gene-1.2")

HSP 1 Score: 68.1662 bits (165), Expect = 6.979e-16
Identity = 44/137 (32.12%), Postives = 74/137 (54.01%), Query Frame = 0

Query:    1 MSFQGKYQRTSSDNYEEFLKALEVSYLLRKAATVSTPTLEVSE-ADGVWTFKTSTTLKSMELKFKLGEEFDETTPDGREVKAVVVQEGNSFISTQTAKKDGQKSTKSVREF--KGDEVIQTMEVLGTDIVCTQTFKR 134
            +S +G Y+RT S+NY+ FL+ + +++L+R  A +S+ T  +S   +G   FKT T L++ E +F +GE++ ET      +      + N     QT +    K    VREF  +G ++  T+E    D+VC Q + R
Sbjct:    2 VSLEGIYKRTKSENYDAFLEKIGLNFLVRPVACLSSSTFTISYIIEGKLRFKTETPLQTTEFEFCVGEDWVETLSGDYMLDCSATLKDNILTIIQTPRDAPDKEITFVREFSEEGMDLTITIE----DVVCKQYYTR 134

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BLAST of cellular retinoic acid-binding protein 2 vs. L. salmonis genes
Match: EMLSAG00000004759 (supercontig:LSalAtl2s:LSalAtl2s250:476390:476626:1 gene:EMLSAG00000004759 transcript:EMLSAT00000004759 description:"augustus_masked-LSalAtl2s250-processed-gene-4.0")

HSP 1 Score: 66.2402 bits (160), Expect = 8.158e-16
Identity = 35/75 (46.67%), Postives = 52/75 (69.33%), Query Frame = 0

Query:   59 MELKFKLGEEFDETTPDGREVKAVVVQEG-NSFISTQTAKKDGQKSTKSVREFKGDEVIQTMEVLGTDIVCTQTF 132
            MELKF++G++F+E T DGR V  +   +G  +F   Q  KKDGQK+TK+ R+FK  + IQ ++V+G+D+  TQ F
Sbjct:    1 MELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQITKKDGQKNTKTGRDFKDGKYIQIIKVVGSDVQYTQVF 75

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BLAST of cellular retinoic acid-binding protein 2 vs. L. salmonis genes
Match: EMLSAG00000008820 (supercontig:LSalAtl2s:LSalAtl2s549:632112:633454:-1 gene:EMLSAG00000008820 transcript:EMLSAT00000008820 description:"maker-LSalAtl2s549-snap-gene-6.7")

HSP 1 Score: 65.0846 bits (157), Expect = 3.947e-15
Identity = 42/112 (37.50%), Postives = 63/112 (56.25%), Query Frame = 0

Query:   22 LEVSYLLRKAATVSTPTLEVSEADGVWTFKTSTTLKSMELKFKLGEEFDETTPDGREVKAVVVQEGNSFISTQTAKKDGQKSTKSVREFKGDEVIQTMEVLGTDIVCTQTFK 133
            L  + LLR AA VSTP+ EVS+       ++  +L+ +             T + R V  +V     +F+S Q A+KDGQKSTK+VR+FK  +  Q  EV+G+D+ C+Q F+
Sbjct:    4 LGANVLLRNAALVSTPSFEVSKEG-----ESERSLRKLH------------TSNVRTVNTLV----TTFVSEQIAEKDGQKSTKTVRDFKDGKCTQATEVVGSDVKCSQVFE 94

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BLAST of cellular retinoic acid-binding protein 2 vs. L. salmonis genes
Match: EMLSAG00000004823 (supercontig:LSalAtl2s:LSalAtl2s254:346296:346535:1 gene:EMLSAG00000004823 transcript:EMLSAT00000004823 description:"augustus_masked-LSalAtl2s254-processed-gene-3.2")

HSP 1 Score: 62.3882 bits (150), Expect = 2.709e-14
Identity = 32/77 (41.56%), Postives = 50/77 (64.94%), Query Frame = 0

Query:   59 MELKFKLGEEFDETTPDGREVKAVVVQEG-NSFISTQTAKKDGQKSTKSVREFKGDEVIQTMEVLGTDIVCTQTFKR 134
            M+LKF++G++F ET  +G  V  ++  +G  +FIS +  K D QKSTK++  FK  +  Q  EV+G+ + CTQ F+R
Sbjct:    1 MQLKFEVGKKFKETPSEGCTVDTLIAMDGATTFISEKILKLDSQKSTKTICHFKDPKCTQVSEVVGSGVKCTQVFER 77

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BLAST of cellular retinoic acid-binding protein 2 vs. SwissProt
Match: gi|14423698|sp|Q17284.1|FABP_BLOTA (RecName: Full=Fatty acid-binding protein; AltName: Full=Bt6; AltName: Allergen=Blo t 13)

HSP 1 Score: 107.842 bits (268), Expect = 6.241e-30
Identity = 59/136 (43.38%), Postives = 85/136 (62.50%), Query Frame = 0

Query:    1 MSFQGKYQRTSSDNYEEFLKALEVSYLLRKAATVSTPTLEVSEADGVWTFKTSTTLKSMELKFKLGEEFDETTPDGREVKAVVVQEG-NSFISTQTAKKDGQKSTKSVREFKGDEVIQTMEVLGTDIVCTQTFKRV 135
            M  +GKY+   SDN+++FL  L V ++++ AA    PTLEV      + F++ +T K+ E+KFKLGEEF+E   DG+ VK VV +EG N FI TQ     G K  K VR+F+GD+V+ T  V   D+   +T+KR+
Sbjct:    1 MPIEGKYKLEKSDNFDKFLDELGVGFMVKTAAKTLKPTLEVDVQGDTYVFRSLSTFKNTEIKFKLGEEFEEDRADGKRVKTVVNKEGDNKFIQTQY----GDKEVKIVRDFQGDDVVVTASV--GDVTSVRTYKRI 130

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BLAST of cellular retinoic acid-binding protein 2 vs. SwissProt
Match: gi|14423714|sp|Q9U5P1.1|FABP_LEPDS (RecName: Full=Fatty acid-binding protein; AltName: Allergen=Lep d 13)

HSP 1 Score: 101.679 bits (252), Expect = 1.259e-27
Identity = 57/134 (42.54%), Postives = 83/134 (61.94%), Query Frame = 0

Query:    2 SFQGKYQRTSSDNYEEFLKALEVSYLLRKAATVSTPTLEVSEADGVWTFKTSTTLKSMELKFKLGEEFDETTPDGREVKAVVVQEG-NSFISTQTAKKDGQKSTKSVREFKGDEVIQTMEVLGTDIVCTQTFKR 134
            +  G+Y+   S+N+++FL  L V +L++ AA    PTLEV+     + F++ +T K+ E+KFKLGEEF+E   DG+ VK V+V++G N F+ TQ     G K  K VREFKGDEV  T  V G  +   + +KR
Sbjct:    3 NIAGQYKLDKSENFDQFLDKLGVGFLVKTAAKTVKPTLEVAVDGDTYIFRSLSTFKNTEIKFKLGEEFEEDRADGKRVKTVIVKDGDNKFVQTQY----GDKEVKVVREFKGDEVEVTASVDG--VTSVRPYKR 130

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BLAST of cellular retinoic acid-binding protein 2 vs. SwissProt
Match: gi|47115571|sp|O01812.1|FABP6_CAEEL (RecName: Full=Fatty acid-binding protein homolog 6)

HSP 1 Score: 97.8265 bits (242), Expect = 5.306e-26
Identity = 51/118 (43.22%), Postives = 71/118 (60.17%), Query Frame = 0

Query:    3 FQGKYQRTSSDNYEEFLKALEVSYLLRKAATVSTPTLEVSEADGVWTFKTSTTLKSMELKFKLGEEFDETTPDGREVKAVVVQEGNSFISTQTAKKDGQKSTKSVREFKGDEVIQTME 120
            F G+++   S+N+EE++K + V  + RKAA    PTLE+     +W     +T K+  L FKLG+EFDETTPDGR VK+VV  E   FI  Q   KD  K +   R  +GD++I T+E
Sbjct:    5 FVGRWKLIHSENFEEYMKEVGVGLITRKAAANLKPTLEIKVEGDLWYSNQYSTFKNTTLSFKLGQEFDETTPDGRTVKSVVNFENGKFIHIQKKIKDSDKESIITRWLEGDKLITTLE 122

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BLAST of cellular retinoic acid-binding protein 2 vs. SwissProt
Match: gi|47115572|sp|O01814.1|FABP5_CAEEL (RecName: Full=Fatty acid-binding protein homolog 5)

HSP 1 Score: 91.2781 bits (225), Expect = 1.911e-23
Identity = 45/118 (38.14%), Postives = 69/118 (58.47%), Query Frame = 0

Query:    3 FQGKYQRTSSDNYEEFLKALEVSYLLRKAATVSTPTLEVSEADGVWTFKTSTTLKSMELKFKLGEEFDETTPDGREVKAVVVQEGNSFISTQTAKKDGQKSTKSVREFKGDEVIQTME 120
            F G+++   S+N+E++LK + V  LLRKAA  + PTLE+      W     +T K+  L+F LG EFDETTPDGR+ K+ +  E    +  Q   KD    +   R F+G+++I T++
Sbjct:    6 FVGRWKLVESENFEDYLKEVGVGLLLRKAACAAKPTLEIKVNGNKWHVNQLSTFKNTTLEFTLGVEFDETTPDGRQFKSTITIEDGKVVHVQKRIKDSDHDSVITRWFEGEKLITTLQ 123

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BLAST of cellular retinoic acid-binding protein 2 vs. SwissProt
Match: gi|132402|sp|P22935.2|RABP2_MOUSE (RecName: Full=Cellular retinoic acid-binding protein 2; AltName: Full=Cellular retinoic acid-binding protein II; Short=CRABP-II)

HSP 1 Score: 91.2781 bits (225), Expect = 2.295e-23
Identity = 54/137 (39.42%), Postives = 80/137 (58.39%), Query Frame = 0

Query:    2 SFQGKYQRTSSDNYEEFLKALEVSYLLRK--AATVSTPTLEVSEADGVWTFKTSTTLKSMELKFKLGEEFDETTPDGREVKAVVVQE-GNSFISTQTAKKDGQKSTKSVREFKGD-EVIQTMEVLGTDIVCTQTFKR 134
            +F G ++   S+N+EE LKAL V+ ++RK   A  S P +E+ + +  +  KTSTT+++ E+ FK+GEEF+E T DGR  K++V  E GN  +  Q   K     T   RE   D E+I TM     D+VCT+ + R
Sbjct:    3 NFSGNWKIIRSENFEEMLKALGVNMMMRKIAVAAASKPAVEIKQENDTFYIKTSTTVRTTEINFKIGEEFEEQTVDGRPCKSLVKWESGNKMVCEQRLLKGEGPKTSWSRELTNDGELILTM--TADDVVCTRVYVR 137

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BLAST of cellular retinoic acid-binding protein 2 vs. SwissProt
Match: gi|81905989|sp|Q9DAK4.1|FBP12_MOUSE (RecName: Full=Fatty acid-binding protein 12)

HSP 1 Score: 88.9669 bits (219), Expect = 1.348e-22
Identity = 47/133 (35.34%), Postives = 78/133 (58.65%), Query Frame = 0

Query:    3 FQGKYQRTSSDNYEEFLKALEVSYLLRKAATVSTPTLEVSEADGVWTFKTSTTLKSMELKFKLGEEFDETTPDGREVKAVVVQEGNSFISTQTAKKDGQKSTKSVREFKGDEVIQTMEVLGTDIVCTQTFKRV 135
             QG ++  S DN+E ++K L V    RK   ++ PT+ +S    + T KT +  K+ E+ FKLGEEF+ETTP GR+ K+ V+ + +S +  Q    DG+++T   R   G  V+++      ++ CT+T++RV
Sbjct:    5 LQGTWKSVSCDNFENYMKELGVGRASRKLGCLAKPTVTISTDGDLITIKTKSIFKNKEISFKLGEEFEETTPSGRKSKSTVILDNDSLVQVQDW--DGKEATICRRLVDGKMVVESAV---NNVTCTRTYQRV 132

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BLAST of cellular retinoic acid-binding protein 2 vs. SwissProt
Match: gi|1710094|sp|P50568.2|RABP2_XENLA (RecName: Full=Cellular retinoic acid-binding protein 2; AltName: Full=Cellular retinoic acid-binding protein; Short=CRABP; Short=xCRABP; Short=xCRABP-b)

HSP 1 Score: 88.9669 bits (219), Expect = 1.758e-22
Identity = 56/138 (40.58%), Postives = 79/138 (57.25%), Query Frame = 0

Query:    2 SFQGKYQRTSSDNYEEFLKALEVSYLLRK--AATVSTPTLEVSEADGVWTFKTSTTLKSMELKFKLGEEFDETTPDGREVKAVV--VQEGNSFISTQTAKKDGQKSTKSVREFKGD-EVIQTMEVLGTDIVCTQTFKR 134
            +F G ++   S+N+EE LKAL V+ +LRK   A  S P +E+ +    +  KTSTT+++ E+ FK+GEEFDE T DGR  K++   V E       +  K DG K T   RE   D E+I TM     D+VCT+ + R
Sbjct:    3 NFSGHWKMKQSENFEEMLKALGVNLMLRKIAVAAASKPAVEIKQEGETFYIKTSTTVRTTEINFKIGEEFDEQTVDGRPCKSLAKWVSENKMACEQKLLKGDGPK-TAWTREMTNDGELILTM--TADDVVCTRIYIR 137

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BLAST of cellular retinoic acid-binding protein 2 vs. SwissProt
Match: gi|462065|sp|Q05423.2|FABP7_CHICK (RecName: Full=Fatty acid-binding protein, brain; AltName: Full=Brain-type fatty acid-binding protein; Short=B-FABP; AltName: Full=Fatty acid-binding protein 7; AltName: Full=Fatty acid-binding protein, retina; AltName: Full=R-FABP)

HSP 1 Score: 88.1965 bits (217), Expect = 2.610e-22
Identity = 49/119 (41.18%), Postives = 73/119 (61.34%), Query Frame = 0

Query:    2 SFQGKYQRTSSDNYEEFLKALEVSYLLRKAATVSTPTLEVS-EADGVWTFKTSTTLKSMELKFKLGEEFDETTPDGREVKAVVVQEGNSFISTQTAKKDGQKSTKSVREFKGDEVIQTM 119
            +F   ++   S N++E++KAL V + +R+   V+ PT+ +S E D V   +T +T K+ E+ FKLGEEFDETTPD R  K+VV  +G+  +  Q  K DG K T  VRE K   ++ T+
Sbjct:    4 AFCATWKLADSHNFDEYMKALGVGFAMRQVGNVTKPTVIISSEGDKV-VIRTQSTFKNTEISFKLGEEFDETTPDDRNCKSVVTLDGDKLVHVQ--KWDG-KETNFVREIKDGRMVMTL 118

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BLAST of cellular retinoic acid-binding protein 2 vs. SwissProt
Match: gi|119802|sp|P05413.4|FABPH_HUMAN (RecName: Full=Fatty acid-binding protein, heart; AltName: Full=Fatty acid-binding protein 3; AltName: Full=Heart-type fatty acid-binding protein; Short=H-FABP; AltName: Full=Mammary-derived growth inhibitor; Short=MDGI; AltName: Full=Muscle fatty acid-binding protein; Short=M-FABP)

HSP 1 Score: 87.4261 bits (215), Expect = 5.418e-22
Identity = 50/133 (37.59%), Postives = 84/133 (63.16%), Query Frame = 0

Query:    2 SFQGKYQRTSSDNYEEFLKALEVSYLLRKAATVSTPTLEVSEADGVWTFKTSTTLKSMELKFKLGEEFDETTPDGREVKAVVVQEGNSFISTQTAKKDGQKSTKSVREFKGDEVIQTMEVLGTDIVCTQTFKR 134
            +F G ++   S N+++++K+L V +  R+ A+++ PT  + +   + T KT +T K+ E+ FKLG EFDETT D R+VK++V  +G   +  Q  K DGQ++T  VRE    ++I T+   GT  VCT+T+++
Sbjct:    4 AFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTFKNTEISFKLGVEFDETTADDRKVKSIVTLDGGKLVHLQ--KWDGQETT-LVRELIDGKLILTL-THGT-AVCTRTYEK 131

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BLAST of cellular retinoic acid-binding protein 2 vs. SwissProt
Match: gi|1710095|sp|P51673.2|RABP2_RAT (RecName: Full=Cellular retinoic acid-binding protein 2; AltName: Full=Cellular retinoic acid-binding protein II; Short=CRABP-II)

HSP 1 Score: 87.0409 bits (214), Expect = 1.042e-21
Identity = 55/138 (39.86%), Postives = 79/138 (57.25%), Query Frame = 0

Query:    2 SFQGKYQRTSSDNYEEFLKALEVSYLLRK--AATVSTPTLEV-SEADGVWTFKTSTTLKSMELKFKLGEEFDETTPDGREVKAVVVQEG-NSFISTQTAKKDGQKSTKSVREFKGD-EVIQTMEVLGTDIVCTQTFKR 134
            +F G ++   S+N+EE LKAL V+ ++RK   A  S P +E+  E D  +  KTSTT+++ E+ FK+GEEF+E T DGR  K++V  E  N  +  Q   K     T   RE   D E+I TM     D+VCT+ + R
Sbjct:    3 NFSGNWKIIRSENFEEMLKALGVNMMMRKIAVAAASKPAVEIKQENDDTFYIKTSTTVRTTEINFKIGEEFEEQTVDGRPCKSLVKWESENKMVCEQRLLKGEGPKTSWSRELTNDGELILTM--TADDVVCTRVYVR 138

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BLAST of cellular retinoic acid-binding protein 2 vs. nr
Match: gi|961375138|gb|ALS04313.1| (cellular retinoic acid-binding protein 2 [Acartia pacifica] >gi|961375142|gb|ALS04315.1| cellular retinoic acid-binding protein 2 [Acartia pacifica])

HSP 1 Score: 210.69 bits (535), Expect = 4.847e-68
Identity = 99/134 (73.88%), Postives = 116/134 (86.57%), Query Frame = 0

Query:    2 SFQGKYQRTSSDNYEEFLKALEVSYLLRKAATVSTPTLEVSEADGVWTFKTSTTLKSMELKFKLGEEFDETTPDGREVKAVVVQEGNSFISTQTAKKDGQKSTKSVREFKGDEVIQTMEVLGTDIVCTQTFKRV 135
            SF+GKY+R S++NYEEFLKAL+V++LLRKAATVSTP +EVSE DGVWT KTSTTLK+MELKFK+GEEFDETTPDGREVKA+V  +GN F+  Q AKK+GQKSTKS+REF GDE I TM + G D+VC Q FKRV
Sbjct:    3 SFKGKYERVSAENYEEFLKALDVNFLLRKAATVSTPVMEVSEEDGVWTIKTSTTLKTMELKFKVGEEFDETTPDGREVKAIVTLDGNKFVCEQKAKKEGQKSTKSIREFNGDECIYTMTIDGMDLVCVQKFKRV 136

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BLAST of cellular retinoic acid-binding protein 2 vs. nr
Match: gi|961375140|gb|ALS04314.1| (cellular retinoic acid-binding protein 2 [Acartia pacifica])

HSP 1 Score: 206.068 bits (523), Expect = 3.413e-66
Identity = 97/134 (72.39%), Postives = 115/134 (85.82%), Query Frame = 0

Query:    2 SFQGKYQRTSSDNYEEFLKALEVSYLLRKAATVSTPTLEVSEADGVWTFKTSTTLKSMELKFKLGEEFDETTPDGREVKAVVVQEGNSFISTQTAKKDGQKSTKSVREFKGDEVIQTMEVLGTDIVCTQTFKRV 135
            SF+GKY+R  ++NYEEFLKAL+V++LLRKAATVSTP +EVSE DGVWT KTSTTLK+MELKFK+GEEFDETTPDGREVKA+V  +GN F+  Q AKK+GQKSTKS+REF G+E I TM + G D+VC Q FKRV
Sbjct:    3 SFKGKYERVFAENYEEFLKALDVNFLLRKAATVSTPVMEVSEEDGVWTIKTSTTLKTMELKFKVGEEFDETTPDGREVKAIVTLDGNKFVCEQKAKKEGQKSTKSIREFNGEECIYTMTIDGMDLVCVQKFKRV 136

[Close]

BLAST of cellular retinoic acid-binding protein 2 vs. nr
Match: gi|961375136|gb|ALS04312.1| (cellular retinoic acid-binding protein 2 [Acartia pacifica])

HSP 1 Score: 204.527 bits (519), Expect = 1.420e-65
Identity = 96/134 (71.64%), Postives = 114/134 (85.07%), Query Frame = 0

Query:    2 SFQGKYQRTSSDNYEEFLKALEVSYLLRKAATVSTPTLEVSEADGVWTFKTSTTLKSMELKFKLGEEFDETTPDGREVKAVVVQEGNSFISTQTAKKDGQKSTKSVREFKGDEVIQTMEVLGTDIVCTQTFKRV 135
            SF+GKY+R  ++NYEEFLKAL+V++LLRKAATVSTP +EVSE DGVWT KTST LK+ME+KFK+GEEFDETTPDGREVKA+V  +GN F+  Q AKK+GQKSTKS+REF GDE I TM + G D+VC Q FKRV
Sbjct:    3 SFKGKYERVFAENYEEFLKALDVNFLLRKAATVSTPVMEVSEEDGVWTIKTSTPLKTMEVKFKVGEEFDETTPDGREVKAIVTLDGNKFVCEQKAKKEGQKSTKSIREFNGDECIYTMTIDGMDLVCVQKFKRV 136

[Close]

BLAST of cellular retinoic acid-binding protein 2 vs. nr
Match: gi|1325273728|ref|XP_023321512.1| (fatty acid-binding protein-like [Eurytemora affinis])

HSP 1 Score: 199.134 bits (505), Expect = 1.971e-63
Identity = 96/135 (71.11%), Postives = 115/135 (85.19%), Query Frame = 0

Query:    2 SFQGKYQRTSSDNYEEFLKALEVSYLLRKAATVSTPTLEVSEADGVWTFKTSTTLKSMELKFKLGEEFDETTPDGREVKAVVVQEGNSFISTQTAKKDGQKSTKSVREFKGDEVIQTMEVLGTD-IVCTQTFKRV 135
            +F+GKY+R S++NYEEFLK L+V++LLRKAATVSTP +EVSE  GVWT KTSTTLKSMELKFK+GEEF+ETT DGREV A V+ +GN F+S Q AKKDGQKSTK++REF GDEV+QTM V G D +VC Q FKR+
Sbjct:    3 AFKGKYERVSAENYEEFLKELDVNFLLRKAATVSTPVMEVSEEGGVWTIKTSTTLKSMELKFKVGEEFEETTADGREVTAKVIVDGNKFVSEQKAKKDGQKSTKTIREFNGDEVVQTMTVDGNDSLVCVQKFKRI 137

[Close]

BLAST of cellular retinoic acid-binding protein 2 vs. nr
Match: gi|961375650|gb|ALS04569.1| (cellular retinoic acid-binding protein 2 [Pseudodiaptomus poplesia])

HSP 1 Score: 195.282 bits (495), Expect = 7.257e-62
Identity = 95/135 (70.37%), Postives = 110/135 (81.48%), Query Frame = 0

Query:    2 SFQGKYQRTSSDNYEEFLKALEVSYLLRKAATVSTPTLEVSEADGVWTFKTSTTLKSMELKFKLGEEFDETTPDGREVKAVVVQEGNSFISTQTAKKDGQKSTKSVREFKGDEVIQTMEVLGT-DIVCTQTFKRV 135
            SF+GKY+R S+DNYEEFLKAL V  LLRKAATVSTP +EVSE +G WT KTSTTLK+MELKFK+GEEFDETTPDGR+V A+V  +GN  ++ Q AKKDG  STKSVREF GDEV+ TM + G  D+VC Q FKRV
Sbjct:    3 SFKGKYERVSADNYEEFLKALGVGLLLRKAATVSTPVMEVSEENGTWTIKTSTTLKTMELKFKIGEEFDETTPDGRDVTALVTLDGNKLVTVQKAKKDGVASTKSVREFNGDEVVYTMTIDGNDDLVCVQKFKRV 137

[Close]

BLAST of cellular retinoic acid-binding protein 2 vs. nr
Match: gi|961376304|gb|ALS04896.1| (cellular retinoic acid-binding protein 2 [Pseudodiaptomus poplesia])

HSP 1 Score: 192.586 bits (488), Expect = 8.361e-61
Identity = 94/135 (69.63%), Postives = 109/135 (80.74%), Query Frame = 0

Query:    2 SFQGKYQRTSSDNYEEFLKALEVSYLLRKAATVSTPTLEVSEADGVWTFKTSTTLKSMELKFKLGEEFDETTPDGREVKAVVVQEGNSFISTQTAKKDGQKSTKSVREFKGDEVIQTMEVLGT-DIVCTQTFKRV 135
            SF+GKY+R S+DNYEEFLKAL V  LLRKAATVSTP +EVSE +G WT KTSTTLK+MELKFK+GEEFD TTPDGR+V A+V  +GN  ++ Q AKKDG  STKSVREF GDEV+ TM + G  D+VC Q FKRV
Sbjct:    3 SFKGKYERVSADNYEEFLKALGVGLLLRKAATVSTPVMEVSEENGTWTIKTSTTLKTMELKFKIGEEFDGTTPDGRDVTALVTLDGNKLVTVQKAKKDGVASTKSVREFNGDEVVYTMTIDGNDDLVCVQKFKRV 137

[Close]

BLAST of cellular retinoic acid-binding protein 2 vs. nr
Match: gi|961376200|gb|ALS04844.1| (cellular retinoic acid-binding protein 2 [Pseudodiaptomus poplesia])

HSP 1 Score: 192.2 bits (487), Expect = 1.041e-60
Identity = 94/135 (69.63%), Postives = 109/135 (80.74%), Query Frame = 0

Query:    2 SFQGKYQRTSSDNYEEFLKALEVSYLLRKAATVSTPTLEVSEADGVWTFKTSTTLKSMELKFKLGEEFDETTPDGREVKAVVVQEGNSFISTQTAKKDGQKSTKSVREFKGDEVIQTMEVLGT-DIVCTQTFKRV 135
            SF+GKY+R  +DNYEEFLKAL V  LLRKAATVSTP +EVSE +G WT KTSTTLK+MELKFK+GEEFDETTPDGR+V A+V  +GN  ++ Q AKKDG  STKSVREF GDEV+ TM + G  D+VC Q FKRV
Sbjct:    3 SFKGKYERVFADNYEEFLKALGVGLLLRKAATVSTPVMEVSEENGTWTIKTSTTLKTMELKFKIGEEFDETTPDGRDVTALVTLDGNKLVTVQKAKKDGVASTKSVREFNGDEVVYTMTIDGNDDLVCVQKFKRV 137

[Close]

BLAST of cellular retinoic acid-binding protein 2 vs. nr
Match: gi|961376306|gb|ALS04897.1| (cellular retinoic acid-binding protein 2 [Pseudodiaptomus poplesia])

HSP 1 Score: 186.037 bits (471), Expect = 2.636e-58
Identity = 91/135 (67.41%), Postives = 108/135 (80.00%), Query Frame = 0

Query:    2 SFQGKYQRTSSDNYEEFLKALEVSYLLRKAATVSTPTLEVSEADGVWTFKTSTTLKSMELKFKLGEEFDETTPDGREVKAVVVQEGNSFISTQTAKKDGQKSTKSVREFKGDEVIQTMEVLGT-DIVCTQTFKRV 135
            SF+GKY+R S+DNYEEFLKAL V  LLRKAATVSTP +EVSE  G WT KTST+LK+MELKFK+GEEF+ETT DGREV A+V  +GN  ++ Q AKKDG  STKS+REF GDEV+ T+ + G  D+VC Q FKRV
Sbjct:    3 SFKGKYERVSADNYEEFLKALGVGLLLRKAATVSTPVMEVSEESGTWTIKTSTSLKTMELKFKIGEEFEETTQDGREVTALVTLDGNKLVTVQKAKKDGVASTKSIREFNGDEVVCTLTIDGNDDLVCVQKFKRV 137

[Close]

BLAST of cellular retinoic acid-binding protein 2 vs. nr
Match: gi|225710890|gb|ACO11291.1| (Cellular retinoic acid-binding protein 2 [Caligus rogercresseyi])

HSP 1 Score: 153.295 bits (386), Expect = 2.582e-45
Identity = 77/134 (57.46%), Postives = 101/134 (75.37%), Query Frame = 0

Query:    2 SFQGKYQRTSSDNYEEFLKALEVSYLLRKAATVSTPTLEVSEADGVWTFKTSTTLKSMELKFKLGEEFDETTPDGREVKAVVVQEGNS-FISTQTAKKDGQKSTKSVREFKGDEVIQTMEVLGTDIVCTQTFKR 134
            +F GKY R  S+NYE+ LK L V+ LLRKAA VSTPT EVS+   VW+FKTST  KSMELKF++G++F+ETT DGR V  +V  EG + F+S QTAKKDG KSTK++R+F+  +  Q  EV+G+D+ CTQ F++
Sbjct:    3 AFMGKYNRVKSENYEDLLKELGVNVLLRKAALVSTPTFEVSKEGEVWSFKTSTVAKSMELKFEVGKKFEETTSDGRLVDTLVTLEGPTKFVSEQTAKKDGHKSTKTIRDFQDGKCTQITEVVGSDVKCTQVFEK 136

[Close]

BLAST of cellular retinoic acid-binding protein 2 vs. nr
Match: gi|225709644|gb|ACO10668.1| (Cellular retinoic acid-binding protein 2 [Caligus rogercresseyi])

HSP 1 Score: 151.754 bits (382), Expect = 1.234e-44
Identity = 76/134 (56.72%), Postives = 101/134 (75.37%), Query Frame = 0

Query:    2 SFQGKYQRTSSDNYEEFLKALEVSYLLRKAATVSTPTLEVSEADGVWTFKTSTTLKSMELKFKLGEEFDETTPDGREVKAVVVQEGNS-FISTQTAKKDGQKSTKSVREFKGDEVIQTMEVLGTDIVCTQTFKR 134
            +F GKY R  S+NYE+ LK L V+ LLRKAA VSTPT EVS+   VW+FKTST  KSM+LKF++G++F+ETT DGR V  +V  EG + F+S QTAKKDG KSTK++R+F+  +  Q  EV+G+D+ CTQ F++
Sbjct:    3 AFMGKYNRVKSENYEDLLKELGVNVLLRKAALVSTPTFEVSKEGEVWSFKTSTVAKSMKLKFEVGKKFEETTSDGRLVDTLVTLEGPTKFVSEQTAKKDGHKSTKTIRDFQDGKCTQITEVVGSDVKCTQVFEK 136

The following BLAST results are available for this feature:

BLAST of cellular retinoic acid-binding protein 2 vs. L. salmonis genes
BLAST of cellular retinoic acid-binding protein 2 vs. SwissProt
BLAST of cellular retinoic acid-binding protein 2 vs. nr

BLAST of cellular retinoic acid-binding protein 2 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 13


Match Name	E-value	Identity	Description
EMLSAG00000004641	4.074e-48	57.46	supercontig:LSalAtl2s:LSalAtl2s2426:5738:7142:1 ge...	[more]
EMLSAG00000005888	6.681e-29	39.26	supercontig:LSalAtl2s:LSalAtl2s319:158357:158776:1...	[more]
EMLSAG00000004244	9.240e-27	53.06	supercontig:LSalAtl2s:LSalAtl2s222:241073:242209:-...	[more]
EMLSAG00000001021	7.405e-25	37.04	supercontig:LSalAtl2s:LSalAtl2s116:235262:235669:-...	[more]
EMLSAG00000009662	4.444e-23	35.77	supercontig:LSalAtl2s:LSalAtl2s623:100839:101246:-...	[more]
EMLSAG00000009128	5.876e-18	32.84	supercontig:LSalAtl2s:LSalAtl2s574:644895:646059:1...	[more]
EMLSAG00000012827	6.979e-16	32.12	supercontig:LSalAtl2s:LSalAtl2s979:205282:205689:1...	[more]
EMLSAG00000004759	8.158e-16	46.67	supercontig:LSalAtl2s:LSalAtl2s250:476390:476626:1...	[more]
EMLSAG00000008820	3.947e-15	37.50	supercontig:LSalAtl2s:LSalAtl2s549:632112:633454:-...	[more]
EMLSAG00000004823	2.709e-14	41.56	supercontig:LSalAtl2s:LSalAtl2s254:346296:346535:1...	[more]

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BLAST of cellular retinoic acid-binding protein 2 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|14423698\|sp\|Q17284.1\|FABP_BLOTA	6.241e-30	43.38	RecName: Full=Fatty acid-binding protein; AltName:...	[more]
gi\|14423714\|sp\|Q9U5P1.1\|FABP_LEPDS	1.259e-27	42.54	RecName: Full=Fatty acid-binding protein; AltName:...	[more]
gi\|47115571\|sp\|O01812.1\|FABP6_CAEEL	5.306e-26	43.22	RecName: Full=Fatty acid-binding protein homolog 6	[more]
gi\|47115572\|sp\|O01814.1\|FABP5_CAEEL	1.911e-23	38.14	RecName: Full=Fatty acid-binding protein homolog 5	[more]
gi\|132402\|sp\|P22935.2\|RABP2_MOUSE	2.295e-23	39.42	RecName: Full=Cellular retinoic acid-binding prote...	[more]
gi\|81905989\|sp\|Q9DAK4.1\|FBP12_MOUSE	1.348e-22	35.34	RecName: Full=Fatty acid-binding protein 12	[more]
gi\|1710094\|sp\|P50568.2\|RABP2_XENLA	1.758e-22	40.58	RecName: Full=Cellular retinoic acid-binding prote...	[more]
gi\|462065\|sp\|Q05423.2\|FABP7_CHICK	2.610e-22	41.18	RecName: Full=Fatty acid-binding protein, brain; A...	[more]
gi\|119802\|sp\|P05413.4\|FABPH_HUMAN	5.418e-22	37.59	RecName: Full=Fatty acid-binding protein, heart; A...	[more]
gi\|1710095\|sp\|P51673.2\|RABP2_RAT	1.042e-21	39.86	RecName: Full=Cellular retinoic acid-binding prote...	[more]

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BLAST of cellular retinoic acid-binding protein 2 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|961375138\|gb\|ALS04313.1\|	4.847e-68	73.88	cellular retinoic acid-binding protein 2 [Acartia ...	[more]
gi\|961375140\|gb\|ALS04314.1\|	3.413e-66	72.39	cellular retinoic acid-binding protein 2 [Acartia ...	[more]
gi\|961375136\|gb\|ALS04312.1\|	1.420e-65	71.64	cellular retinoic acid-binding protein 2 [Acartia ...	[more]
gi\|1325273728\|ref\|XP_023321512.1\|	1.971e-63	71.11	fatty acid-binding protein-like [Eurytemora affini...	[more]
gi\|961375650\|gb\|ALS04569.1\|	7.257e-62	70.37	cellular retinoic acid-binding protein 2 [Pseudodi...	[more]
gi\|961376304\|gb\|ALS04896.1\|	8.361e-61	69.63	cellular retinoic acid-binding protein 2 [Pseudodi...	[more]
gi\|961376200\|gb\|ALS04844.1\|	1.041e-60	69.63	cellular retinoic acid-binding protein 2 [Pseudodi...	[more]
gi\|961376306\|gb\|ALS04897.1\|	2.636e-58	67.41	cellular retinoic acid-binding protein 2 [Pseudodi...	[more]
gi\|225710890\|gb\|ACO11291.1\|	2.582e-45	57.46	Cellular retinoic acid-binding protein 2 [Caligus ...	[more]
gi\|225709644\|gb\|ACO10668.1\|	1.234e-44	56.72	Cellular retinoic acid-binding protein 2 [Caligus ...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold25_size650667	supercontig	scaffold25_size650667:4954..5887 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	F:lipid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold25_size650667-snap-gene-0.20-mRNA-1	maker-scaffold25_size650667-snap-gene-0.20-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold25_size650667:4954..5887-

gene from alignment at scaffold25_size650667:4954..5887-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold25_size650667-snap-gene-0.20 ID=maker-scaffold25_size650667-snap-gene-0.20|Name=cellular retinoic acid-binding protein 2|organism=Tigriopus kingsejongensis|type=gene|length=934bp|location=Sequence derived from alignment at scaffold25_size650667:4954..5887- (Tigriopus kingsejongensis)
TTTTCTTGTGATAAGCTCATCGGCCACCCTTCGTTTGGACAGACTTGAGC
AAAGAACTAGGGAAGAGCACGCGCAAGTCTGTTCAAGTGTGCAACGCCGA
CCAATATTTTAACAGTCGTTGTTTGATCTGTCCCTGTCCCAGAAGCACCG
AATTTCAGCCTCTATCTCATTCCATTTTTCACATTTGACTGTCCCGAACC
GAGACTTGACCTCTCCTCTGCAACATGTCTTTCCAAGGAAAATATCAACG
CACCTCGTCCGACAACTACGAAGAGTTCCTCAAGGCCCTGGAAGTGAGCT
ACTTGCTCCGGAAGGCCGCCACGGTCTCTACGCCCACTCTGGAGGTAAGG
TTCACCTTTTCCCGGCACATGTAGGCCCGCCGTGCTCTCTTAGTTCTTAT
CATGTCGTCCGCCATATGGAAGATGGCCACCGATAGGTTGCTGACCAATT
GTCTGCAGCCAATGAGGTGCGCTCATTTCAGGTAGACAGCCGGTACTCTC
TGTGAGGGCCATAGGGGGATTAGGCGGAAATGAGAGCTGGAGATTAGGGG
ATTACCATGTTGTCTCAAAGTAACATTTCTGTCTCTAGGTGAGCGAGGCT
GATGGTGTTTGGACCTTCAAGACCTCGACCACCCTCAAGTCCATGGAGCT
GAAGTTCAAGCTGGGCGAGGAGTTCGACGAAACGACCCCCGATGGTCGCG
AGGTGAAAGCTGTCGTGGTTCAAGAGGGCAACAGCTTCATCTCGACCCAG
ACGGCCAAGAAGGACGGTCAGAAGAGCACCAAGTCTGTGCGCGAGTTTAA
GGGCGACGAGGTCATTCAGACCATGGAGGTTCTTGGAACCGACATCGTTT
GCACTCAGACCTTCAAAAGGGTTTAGTAGAATCCCGTTTTATTGTATGAA
GCATTGCTAATCGTCAAGGAGGAATAAATTTCTT

Synonyms

The feature 'cellular retinoic acid-binding protein 2' has the following synonyms


Synonym
Tk06682

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