EMLSAG00000004759, EMLSAG00000004759-687525 (gene) Lepeophtheirus salmonis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000004759 vs. GO
Match: - (symbol:CRABP2 "Cellular retinoic acid-binding protein 2" species:9606 "Homo sapiens" [GO:0001972 "retinoic acid binding" evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA] [GO:0005501 "retinoid binding" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS] [GO:0008544 "epidermis development" evidence=TAS] [GO:0016918 "retinal binding" evidence=IEA] [GO:0019841 "retinol binding" evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis" evidence=IEA] [GO:0042573 "retinoic acid metabolic process" evidence=IEA] [GO:0070062 "extracellular vesicular exosome" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000463 PRINTS:PR00178 PROSITE:PS00214 InterPro:IPR000566 EMBL:M68867 GO:GO:0005783 GO:GO:0005634 GO:GO:0005737 GO:GO:0070062 GO:GO:0007165 GO:GO:0006355 Gene3D:2.40.128.20 InterPro:IPR012674 InterPro:IPR011038 Pfam:PF00061 SUPFAM:SSF50814 GO:GO:0005215 GO:GO:0042573 GO:GO:0019841 GO:GO:0016918 GO:GO:0035115 GO:GO:0008544 EMBL:CH471121 GO:GO:0001972 HOVERGEN:HBG005633 OrthoDB:EOG7NW6BZ TreeFam:TF316894 EMBL:AL590666 GO:GO:0005501 HOGENOM:HOG000004831 DrugBank:DB00523 CTD:1382 eggNOG:NOG300013 KO:K17289 EMBL:M97815 EMBL:M97814 EMBL:CR450357 EMBL:BT019827 EMBL:AK312007 EMBL:AB593017 EMBL:BC001109 PIR:A45057 RefSeq:NP_001186652.1 RefSeq:NP_001869.1 UniGene:Hs.405662 PDB:1BLR PDB:1BM5 PDB:1CBQ PDB:1CBS PDB:1XCA PDB:2CBS PDB:2FR3 PDB:2FRS PDB:2FS6 PDB:2FS7 PDB:2G78 PDB:2G79 PDB:2G7B PDB:3CBS PDB:3CR6 PDB:3CWK PDB:3D95 PDB:3D96 PDB:3D97 PDB:3F8A PDB:3F9D PDB:3FA6 PDB:3FA7 PDB:3FA8 PDB:3FA9 PDB:3FEK PDB:3FEL PDB:3FEN PDB:3FEP PDB:3I17 PDB:4I9R PDB:4I9S PDB:4M6S PDB:4M7M PDBsum:1BLR PDBsum:1BM5 PDBsum:1CBQ PDBsum:1CBS PDBsum:1XCA PDBsum:2CBS PDBsum:2FR3 PDBsum:2FRS PDBsum:2FS6 PDBsum:2FS7 PDBsum:2G78 PDBsum:2G79 PDBsum:2G7B PDBsum:3CBS PDBsum:3CR6 PDBsum:3CWK PDBsum:3D95 PDBsum:3D96 PDBsum:3D97 PDBsum:3F8A PDBsum:3F9D PDBsum:3FA6 PDBsum:3FA7 PDBsum:3FA8 PDBsum:3FA9 PDBsum:3FEK PDBsum:3FEL PDBsum:3FEN PDBsum:3FEP PDBsum:3I17 PDBsum:4I9R PDBsum:4I9S PDBsum:4M6S PDBsum:4M7M ProteinModelPortal:P29373 SMR:P29373 BioGrid:107773 STRING:9606.ENSP00000357204 ChEMBL:CHEMBL2221342 PhosphoSite:P29373 DMDM:132401 DOSAC-COBS-2DPAGE:P29373 PaxDb:P29373 PeptideAtlas:P29373 PRIDE:P29373 DNASU:1382 Ensembl:ENST00000368221 Ensembl:ENST00000368222 GeneID:1382 KEGG:hsa:1382 UCSC:uc001fpr.3 GeneCards:GC01M156669 HGNC:HGNC:2339 HPA:HPA004135 MIM:180231 neXtProt:NX_P29373 PharmGKB:PA26859 InParanoid:P29373 OMA:NMMLRKI PhylomeDB:P29373 EvolutionaryTrace:P29373 GeneWiki:CRABP2 GenomeRNAi:1382 NextBio:5615 PRO:PR:P29373 ArrayExpress:P29373 Bgee:P29373 CleanEx:HS_CRABP2 Genevestigator:P29373 Uniprot:P29373) HSP 1 Score: 44.2838 bits (103), Expect = 7.154e-6 Identity = 27/77 (35.06%), Postives = 42/77 (54.55%), Query Frame = 0
Query: 2 ELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQ-ITKKDGQKNTKTGRDFKDGKYIQIIKVVGSDVQYTQVFVK 77
E+ F+VG++FEE T DGRP +L + EQ + K +G K + T DG+ I+ + DV T+V+V+
Sbjct: 63 EINFKVGEEFEEQTVDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTRELTNDGEL--ILTMTADDVVCTRVYVR 137
BLAST of EMLSAG00000004759 vs. GO
Match: - (symbol:CRABP2 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0001972 "retinoic acid binding" evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis" evidence=IEA] [GO:0042573 "retinoic acid metabolic process" evidence=IEA] InterPro:IPR000463 PRINTS:PR00178 PROSITE:PS00214 InterPro:IPR000566 GO:GO:0005634 GO:GO:0005737 Gene3D:2.40.128.20 InterPro:IPR012674 InterPro:IPR011038 Pfam:PF00061 SUPFAM:SSF50814 GO:GO:0005215 GO:GO:0042573 GO:GO:0035115 GO:GO:0001972 OrthoDB:EOG7NW6BZ TreeFam:TF316894 GeneTree:ENSGT00560000076799 CTD:1382 KO:K17289 OMA:NMMLRKI RefSeq:XP_854915.1 ProteinModelPortal:E2QS58 Ensembl:ENSCAFT00000026528 GeneID:612093 KEGG:cfa:612093 NextBio:20897626 Uniprot:E2QS58) HSP 1 Score: 44.2838 bits (103), Expect = 7.298e-6 Identity = 26/77 (33.77%), Postives = 42/77 (54.55%), Query Frame = 0
Query: 2 ELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQ-ITKKDGQKNTKTGRDFKDGKYIQIIKVVGSDVQYTQVFVK 77
E+ F+VG++FEE T DGRP +L + EQ + K DG K + T DG+ ++ + D+ T+V+V+
Sbjct: 63 EVNFKVGEEFEEQTVDGRPCKSLVKWESENKMVCEQRLLKGDGPKTSWTRELTNDGEL--VLTMTADDIVCTRVYVR 137
BLAST of EMLSAG00000004759 vs. GO
Match: - (symbol:CRABP2 "Cellular retinoic acid-binding protein 2" species:9913 "Bos taurus" [GO:0005215 "transporter activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0016918 "retinal binding" evidence=IEA] [GO:0019841 "retinol binding" evidence=IEA] InterPro:IPR000463 PRINTS:PR00178 PROSITE:PS00214 InterPro:IPR000566 GO:GO:0005783 GO:GO:0005634 GO:GO:0005737 Gene3D:2.40.128.20 InterPro:IPR012674 InterPro:IPR011038 Pfam:PF00061 SUPFAM:SSF50814 GO:GO:0005215 GO:GO:0019841 GO:GO:0016918 HOVERGEN:HBG005633 HOGENOM:HOG000004831 EMBL:AY821680 RefSeq:NP_001008670.1 UniGene:Bt.1151 ProteinModelPortal:Q5PXY7 SMR:Q5PXY7 PRIDE:Q5PXY7 GeneID:493998 KEGG:bta:493998 CTD:1382 eggNOG:NOG300013 InParanoid:Q5PXY7 KO:K17289 NextBio:20865527 Uniprot:Q5PXY7) HSP 1 Score: 43.5134 bits (101), Expect = 1.481e-5 Identity = 25/77 (32.47%), Postives = 42/77 (54.55%), Query Frame = 0
Query: 2 ELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQ-ITKKDGQKNTKTGRDFKDGKYIQIIKVVGSDVQYTQVFVK 77
E+ F++G++FEE T DGRP +L + EQ + K +G K + T DG+ I+ + D+ T+V+V+
Sbjct: 63 EINFKIGEEFEEQTVDGRPCKSLVKWESENKMVCEQRLLKGEGPKTSWTRELTNDGEL--ILTMTADDIVCTRVYVR 137
BLAST of EMLSAG00000004759 vs. GO
Match: - (symbol:CRABP2 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0001972 "retinoic acid binding" evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis" evidence=IEA] [GO:0042573 "retinoic acid metabolic process" evidence=IEA] InterPro:IPR000463 PRINTS:PR00178 PROSITE:PS00214 InterPro:IPR000566 GO:GO:0005634 GO:GO:0005737 Gene3D:2.40.128.20 InterPro:IPR012674 InterPro:IPR011038 Pfam:PF00061 SUPFAM:SSF50814 GO:GO:0005215 GO:GO:0042573 GO:GO:0035115 GO:GO:0001972 OrthoDB:EOG7NW6BZ TreeFam:TF316894 GeneTree:ENSGT00560000076799 OMA:NMMLRKI EMBL:CU582900 Ensembl:ENSSSCT00000007089 ArrayExpress:F1RHI8 Uniprot:F1RHI8) HSP 1 Score: 43.1282 bits (100), Expect = 1.687e-5 Identity = 25/77 (32.47%), Postives = 42/77 (54.55%), Query Frame = 0
Query: 2 ELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQ-ITKKDGQKNTKTGRDFKDGKYIQIIKVVGSDVQYTQVFVK 77
E+ F++G++FEE T DGRP +L + EQ + K +G K + T DG+ I+ + D+ T+V+V+
Sbjct: 63 EINFKIGEEFEEQTVDGRPCKSLVKWESENKMVCEQRLLKGEGPKTSWTRELTNDGEL--ILTMTADDIVCTRVYVR 137
BLAST of EMLSAG00000004759 vs. GO
Match: - (symbol:CRABP2 "Cellular retinoic acid-binding protein 2" species:9913 "Bos taurus" [GO:0001972 "retinoic acid binding" evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis" evidence=IEA] [GO:0042573 "retinoic acid metabolic process" evidence=IEA] InterPro:IPR000463 PRINTS:PR00178 PROSITE:PS00214 InterPro:IPR000566 GO:GO:0005634 GO:GO:0005737 Gene3D:2.40.128.20 InterPro:IPR012674 InterPro:IPR011038 Pfam:PF00061 SUPFAM:SSF50814 GO:GO:0005215 GO:GO:0042573 GO:GO:0035115 GO:GO:0001972 HOVERGEN:HBG005633 OrthoDB:EOG7NW6BZ TreeFam:TF316894 GeneTree:ENSGT00560000076799 UniGene:Bt.1151 OMA:NMMLRKI EMBL:DAAA02007121 EMBL:BC142037 SMR:A5PJB5 STRING:9913.ENSBTAP00000007515 Ensembl:ENSBTAT00000007515 InParanoid:A5PJB5 Uniprot:A5PJB5) HSP 1 Score: 42.743 bits (99), Expect = 2.191e-5 Identity = 24/77 (31.17%), Postives = 42/77 (54.55%), Query Frame = 0
Query: 2 ELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQ-ITKKDGQKNTKTGRDFKDGKYIQIIKVVGSDVQYTQVFVK 77
E+ F++G++FEE T DGRP +L + EQ + K +G K + T DG+ I+ + D+ T+V+++
Sbjct: 63 EINFKIGEEFEEQTVDGRPCKSLVKWESENKMVCEQRLLKGEGPKTSWTRELTNDGEL--ILTMTADDIVCTRVYIR 137
BLAST of EMLSAG00000004759 vs. GO
Match: - (symbol:Crabp2 "Cellular retinoic acid-binding protein 2" species:10116 "Rattus norvegicus" [GO:0005215 "transporter activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0016918 "retinal binding" evidence=IEA] [GO:0019841 "retinol binding" evidence=IEA] InterPro:IPR000463 PRINTS:PR00178 PROSITE:PS00214 InterPro:IPR000566 RGD:62070 GO:GO:0005783 GO:GO:0005829 GO:GO:0005634 Gene3D:2.40.128.20 InterPro:IPR012674 InterPro:IPR011038 Pfam:PF00061 SUPFAM:SSF50814 GO:GO:0006869 GO:GO:0005215 GO:GO:0019841 GO:GO:0002138 GO:GO:0016918 GO:GO:0001972 HOVERGEN:HBG005633 OrthoDB:EOG7NW6BZ TreeFam:TF316894 GeneTree:ENSGT00560000076799 HOGENOM:HOG000004831 CTD:1382 eggNOG:NOG300013 KO:K17289 EMBL:U23407 PIR:I53298 RefSeq:NP_058940.1 RefSeq:XP_003749365.1 UniGene:Rn.11333 ProteinModelPortal:P51673 SMR:P51673 STRING:10116.ENSRNOP00000015134 ChEMBL:CHEMBL4345 PRIDE:P51673 Ensembl:ENSRNOT00000025183 GeneID:100911902 GeneID:29563 KEGG:rno:100911902 KEGG:rno:29563 UCSC:RGD:62070 InParanoid:P51673 OMA:FPKWETD NextBio:609622 PRO:PR:P51673 ArrayExpress:P51673 Genevestigator:P51673 Uniprot:P51673) HSP 1 Score: 42.743 bits (99), Expect = 2.378e-5 Identity = 25/77 (32.47%), Postives = 42/77 (54.55%), Query Frame = 0
Query: 2 ELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQ-ITKKDGQKNTKTGRDFKDGKYIQIIKVVGSDVQYTQVFVK 77
E+ F++G++FEE T DGRP +L + EQ + K +G K + + DG+ I+ + DV T+V+V+
Sbjct: 64 EINFKIGEEFEEQTVDGRPCKSLVKWESENKMVCEQRLLKGEGPKTSWSRELTNDGEL--ILTMTADDVVCTRVYVR 138
BLAST of EMLSAG00000004759 vs. GO
Match: - (symbol:Crabp2 "cellular retinoic acid binding protein 2" species:10116 "Rattus norvegicus" [GO:0001972 "retinoic acid binding" evidence=ISO;IDA] [GO:0002138 "retinoic acid biosynthetic process" evidence=IEP] [GO:0005215 "transporter activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006869 "lipid transport" evidence=NAS] [GO:0008289 "lipid binding" evidence=TAS] [GO:0016918 "retinal binding" evidence=IEA] [GO:0019841 "retinol binding" evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis" evidence=ISO] [GO:0042573 "retinoic acid metabolic process" evidence=ISO;NAS] [GO:0070062 "extracellular vesicular exosome" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000463 PRINTS:PR00178 PROSITE:PS00214 InterPro:IPR000566 RGD:62070 GO:GO:0005783 GO:GO:0005829 GO:GO:0005634 Gene3D:2.40.128.20 InterPro:IPR012674 InterPro:IPR011038 Pfam:PF00061 SUPFAM:SSF50814 GO:GO:0006869 GO:GO:0005215 GO:GO:0019841 GO:GO:0002138 GO:GO:0016918 GO:GO:0001972 HOVERGEN:HBG005633 OrthoDB:EOG7NW6BZ TreeFam:TF316894 GeneTree:ENSGT00560000076799 HOGENOM:HOG000004831 CTD:1382 eggNOG:NOG300013 KO:K17289 EMBL:U23407 PIR:I53298 RefSeq:NP_058940.1 RefSeq:XP_003749365.1 UniGene:Rn.11333 ProteinModelPortal:P51673 SMR:P51673 STRING:10116.ENSRNOP00000015134 ChEMBL:CHEMBL4345 PRIDE:P51673 Ensembl:ENSRNOT00000025183 GeneID:100911902 GeneID:29563 KEGG:rno:100911902 KEGG:rno:29563 UCSC:RGD:62070 InParanoid:P51673 OMA:FPKWETD NextBio:609622 PRO:PR:P51673 ArrayExpress:P51673 Genevestigator:P51673 Uniprot:P51673) HSP 1 Score: 42.743 bits (99), Expect = 2.378e-5 Identity = 25/77 (32.47%), Postives = 42/77 (54.55%), Query Frame = 0
Query: 2 ELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQ-ITKKDGQKNTKTGRDFKDGKYIQIIKVVGSDVQYTQVFVK 77
E+ F++G++FEE T DGRP +L + EQ + K +G K + + DG+ I+ + DV T+V+V+
Sbjct: 64 EINFKIGEEFEEQTVDGRPCKSLVKWESENKMVCEQRLLKGEGPKTSWSRELTNDGEL--ILTMTADDVVCTRVYVR 138
BLAST of EMLSAG00000004759 vs. GO
Match: - (symbol:Crabp2 "cellular retinoic acid binding protein II" species:10090 "Mus musculus" [GO:0001972 "retinoic acid binding" evidence=ISO;IDA] [GO:0005215 "transporter activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005829 "cytosol" evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0016918 "retinal binding" evidence=IEA] [GO:0019841 "retinol binding" evidence=IEA] [GO:0030332 "cyclin binding" evidence=ISO] [GO:0035115 "embryonic forelimb morphogenesis" evidence=IMP] [GO:0042573 "retinoic acid metabolic process" evidence=IDA] [GO:0070062 "extracellular vesicular exosome" evidence=ISO] InterPro:IPR000463 PRINTS:PR00178 PROSITE:PS00214 InterPro:IPR000566 MGI:MGI:88491 GO:GO:0005783 GO:GO:0005634 GO:GO:0005737 Gene3D:2.40.128.20 InterPro:IPR012674 InterPro:IPR011038 Pfam:PF00061 SUPFAM:SSF50814 GO:GO:0005215 GO:GO:0042573 GO:GO:0019841 GO:GO:0016918 GO:GO:0035115 GO:GO:0001972 HOVERGEN:HBG005633 OrthoDB:EOG7NW6BZ TreeFam:TF316894 GeneTree:ENSGT00560000076799 HOGENOM:HOG000004831 CTD:1382 eggNOG:NOG300013 KO:K17289 OMA:NMMLRKI EMBL:M35523 EMBL:M87539 EMBL:M87538 EMBL:BC018397 PIR:A42495 RefSeq:NP_031785.1 UniGene:Mm.4757 ProteinModelPortal:P22935 SMR:P22935 STRING:10090.ENSMUSP00000005019 BindingDB:P22935 ChEMBL:CHEMBL4172 PhosphoSite:P22935 PaxDb:P22935 PRIDE:P22935 Ensembl:ENSMUST00000005019 GeneID:12904 KEGG:mmu:12904 UCSC:uc008ptk.1 InParanoid:P22935 NextBio:282524 PRO:PR:P22935 Bgee:P22935 CleanEx:MM_CRABP2 Genevestigator:P22935 Uniprot:P22935) HSP 1 Score: 42.3578 bits (98), Expect = 3.741e-5 Identity = 25/77 (32.47%), Postives = 42/77 (54.55%), Query Frame = 0
Query: 2 ELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQ-ITKKDGQKNTKTGRDFKDGKYIQIIKVVGSDVQYTQVFVK 77
E+ F++G++FEE T DGRP +L + EQ + K +G K + + DG+ I+ + DV T+V+V+
Sbjct: 63 EINFKIGEEFEEQTVDGRPCKSLVKWESGNKMVCEQRLLKGEGPKTSWSRELTNDGEL--ILTMTADDVVCTRVYVR 137
BLAST of EMLSAG00000004759 vs. GO
Match: - (symbol:Fabp3 "Fatty acid-binding protein, heart" species:10116 "Rattus norvegicus" [GO:0008092 "cytoskeletal protein binding" evidence=IEA] InterPro:IPR000463 PRINTS:PR00178 PROSITE:PS00214 InterPro:IPR000566 RGD:69048 GO:GO:0005829 GO:GO:0042493 GO:GO:0070542 Gene3D:2.40.128.20 InterPro:IPR012674 InterPro:IPR011038 Pfam:PF00061 SUPFAM:SSF50814 GO:GO:0032868 GO:GO:0006635 GO:GO:0005324 GO:GO:0016528 HOVERGEN:HBG005633 OrthoDB:EOG7NW6BZ HOGENOM:HOG000004829 TreeFam:TF316894 GeneTree:ENSGT00740000115180 CTD:2170 eggNOG:NOG281572 KO:K08752 OMA:GSVVCTR GO:GO:0050543 EMBL:M18034 EMBL:J02773 EMBL:AF144090 PIR:A28458 RefSeq:NP_077076.1 UniGene:Rn.32566 ProteinModelPortal:P07483 SMR:P07483 STRING:10116.ENSRNOP00000017325 PhosphoSite:P07483 PaxDb:P07483 PRIDE:P07483 Ensembl:ENSRNOT00000017325 GeneID:79131 KEGG:rno:79131 UCSC:RGD:69048 InParanoid:P07483 NextBio:614582 PRO:PR:P07483 Genevestigator:P07483 Uniprot:P07483) HSP 1 Score: 41.9726 bits (97), Expect = 3.985e-5 Identity = 24/58 (41.38%), Postives = 35/58 (60.34%), Query Frame = 0
Query: 2 ELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQITKKDGQKNTKTGRDFKDGKYI 59
E+ FQ+G +F+E T+D R V ++ T+DG + K DGQ+ T T R+ DGK I
Sbjct: 62 EISFQLGVEFDEVTADDRKVKSVVTLDGG---KLVHVQKWDGQETTLT-RELSDGKLI 115
BLAST of EMLSAG00000004759 vs. GO
Match: - (symbol:Fabp3 "fatty acid binding protein 3, muscle and heart" species:10116 "Rattus norvegicus" [GO:0005324 "long-chain fatty acid transporter activity" evidence=IPI] [GO:0005504 "fatty acid binding" evidence=TAS;IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006631 "fatty acid metabolic process" evidence=IEP] [GO:0006635 "fatty acid beta-oxidation" evidence=NAS] [GO:0008092 "cytoskeletal protein binding" evidence=IEA;ISO] [GO:0015909 "long-chain fatty acid transport" evidence=IDA] [GO:0016528 "sarcoplasm" evidence=IDA] [GO:0032868 "response to insulin" evidence=IEP] [GO:0042493 "response to drug" evidence=IEP] [GO:0050543 "icosatetraenoic acid binding" evidence=IPI] [GO:0070062 "extracellular vesicular exosome" evidence=ISO] [GO:0070542 "response to fatty acid" evidence=IEP] [GO:2001245 "regulation of phosphatidylcholine biosynthetic process" evidence=ISO] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0016529 "sarcoplasmic reticulum" evidence=IDA] InterPro:IPR000463 PRINTS:PR00178 PROSITE:PS00214 InterPro:IPR000566 RGD:69048 GO:GO:0005829 GO:GO:0042493 GO:GO:0070542 Gene3D:2.40.128.20 InterPro:IPR012674 InterPro:IPR011038 Pfam:PF00061 SUPFAM:SSF50814 GO:GO:0032868 GO:GO:0006635 GO:GO:0005324 GO:GO:0016528 HOVERGEN:HBG005633 OrthoDB:EOG7NW6BZ HOGENOM:HOG000004829 TreeFam:TF316894 GeneTree:ENSGT00740000115180 CTD:2170 eggNOG:NOG281572 KO:K08752 OMA:GSVVCTR GO:GO:0050543 EMBL:M18034 EMBL:J02773 EMBL:AF144090 PIR:A28458 RefSeq:NP_077076.1 UniGene:Rn.32566 ProteinModelPortal:P07483 SMR:P07483 STRING:10116.ENSRNOP00000017325 PhosphoSite:P07483 PaxDb:P07483 PRIDE:P07483 Ensembl:ENSRNOT00000017325 GeneID:79131 KEGG:rno:79131 UCSC:RGD:69048 InParanoid:P07483 NextBio:614582 PRO:PR:P07483 Genevestigator:P07483 Uniprot:P07483) HSP 1 Score: 41.9726 bits (97), Expect = 3.985e-5 Identity = 24/58 (41.38%), Postives = 35/58 (60.34%), Query Frame = 0
Query: 2 ELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQITKKDGQKNTKTGRDFKDGKYI 59
E+ FQ+G +F+E T+D R V ++ T+DG + K DGQ+ T T R+ DGK I
Sbjct: 62 EISFQLGVEFDEVTADDRKVKSVVTLDGG---KLVHVQKWDGQETTLT-RELSDGKLI 115
BLAST of EMLSAG00000004759 vs. C. finmarchicus
Match: gi|592926628|gb|GAXK01031820.1| (TSA: Calanus finmarchicus comp20956_c2_seq1 transcribed RNA sequence) HSP 1 Score: 50.0618 bits (118), Expect = 5.105e-8 Identity = 31/76 (40.79%), Postives = 44/76 (57.89%), Query Frame = 0
Query: 1 MELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQITKKDGQKNTKTGRDFK-DGKYIQIIKVVGSDVQYTQVF 75
MELKF++G+KF+E T DGR + + T D Q KK GQK+T++ R+ K + + + GSDV TQ F
Sbjct: 112 MELKFKLGEKFDETTPDGRETSAVVTYDEGKIVTV-QTAKKAGQKSTRSVRELTGQDKMVYTMMIEGSDVACTQTF 336
BLAST of EMLSAG00000004759 vs. C. finmarchicus
Match: gi|592775866|gb|GAXK01178702.1| (TSA: Calanus finmarchicus comp14576_c2_seq1 transcribed RNA sequence) HSP 1 Score: 47.3654 bits (111), Expect = 1.800e-7 Identity = 30/76 (39.47%), Postives = 45/76 (59.21%), Query Frame = 0
Query: 1 MELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQITKKDGQKNTKTGRDFKD-GKYIQIIKVVGSDVQYTQVF 75
MELKF++G+KF+E T+DGR +T+ +D Q KK GQK+T++ R+ + I + G+DV TQ F
Sbjct: 191 MELKFKLGEKFDEHTTDGRDTSTVVNVDNGKIVTV-QTAKKAGQKSTRSIREMTGPDTMLFTIMIEGTDVSCTQTF 415
BLAST of EMLSAG00000004759 vs. C. finmarchicus
Match: gi|592775867|gb|GAXK01178701.1| (TSA: Calanus finmarchicus comp14576_c1_seq1 transcribed RNA sequence) HSP 1 Score: 47.3654 bits (111), Expect = 2.132e-7 Identity = 30/76 (39.47%), Postives = 45/76 (59.21%), Query Frame = 0
Query: 1 MELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQITKKDGQKNTKTGRDFKD-GKYIQIIKVVGSDVQYTQVF 75
MELKF++G+KF+E T+DGR +T+ +D Q KK GQK+T++ R+ + I + G+DV TQ F
Sbjct: 96 MELKFKLGEKFDEHTTDGRDTSTVVNVDNGKIVTV-QTAKKAGQKSTRSIREMTGPDTMLFTIMIEGTDVSCTQTF 320
BLAST of EMLSAG00000004759 vs. C. finmarchicus
Match: gi|592892391|gb|GAXK01065984.1| (TSA: Calanus finmarchicus comp5093_c0_seq1 transcribed RNA sequence) HSP 1 Score: 45.8246 bits (107), Expect = 9.622e-7 Identity = 25/53 (47.17%), Postives = 36/53 (67.92%), Query Frame = 0
Query: 1 MELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQITKKDGQKNTKTGRDF 53
MELKF++G++FEE T+DGR V+ + T + Q KKDGQK+TK+ R+
Sbjct: 213 MELKFKLGEEFEETTADGRQVSAVVTFEDGKIITV-QKAKKDGQKSTKSIREM 368
BLAST of EMLSAG00000004759 vs. C. finmarchicus
Match: gi|592839066|gb|GAXK01118478.1| (TSA: Calanus finmarchicus comp124765_c0_seq1 transcribed RNA sequence) HSP 1 Score: 44.2838 bits (103), Expect = 3.803e-6 Identity = 29/77 (37.66%), Postives = 42/77 (54.55%), Query Frame = 0
Query: 1 MELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQITKKDGQKNTKTGRDFKDGKYIQIIKVVGSDVQYTQVFVK 77
+ELKF++G++FEE T+DGR T TM+G Q K G+K+ RDF D +K+ V TQV+ +
Sbjct: 242 IELKFKLGEEFEEDTTDGRKCKTTVTMEGNKLIT-NQKALKSGEKDVMVVRDFTDEGL--TMKMTTGGVTCTQVYAR 463
BLAST of EMLSAG00000004759 vs. C. finmarchicus
Match: gi|592856316|gb|GAXK01101228.1| (TSA: Calanus finmarchicus comp6189_c0_seq1 transcribed RNA sequence) HSP 1 Score: 44.2838 bits (103), Expect = 9.980e-6 Identity = 32/77 (41.56%), Postives = 44/77 (57.14%), Query Frame = 0
Query: 1 MELKFQVGKKFEEATSDGRP-VNTLDTMDGPTTFDFEQITKKDGQKNTKTGRDFKDG-KYIQIIKVVGSDVQYTQVF 75
MELKF++G+ F+E T DGR V T+ DG Q KK+GQK+TK+ R+ + + I V GSD+ Q F
Sbjct: 315 MELKFKLGEAFDETTPDGREVVATVTCEDGKIV--TVQKAKKEGQKSTKSVREMNGADEMVYTITVDGSDLVSVQKF 539
BLAST of EMLSAG00000004759 vs. C. finmarchicus
Match: gi|592785878|gb|GAXK01168690.1| (TSA: Calanus finmarchicus comp891_c0_seq1 transcribed RNA sequence) HSP 1 Score: 42.3578 bits (98), Expect = 1.839e-5 Identity = 24/53 (45.28%), Postives = 34/53 (64.15%), Query Frame = 0
Query: 1 MELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQITKKDGQKNTKTGRDF 53
MELKF++G++F+E T DGR V + T + Q KKDGQK+TK+ R+
Sbjct: 130 MELKFKLGEEFDETTPDGREVTAVVTCEDGKIVTV-QKAKKDGQKSTKSVREM 285
BLAST of EMLSAG00000004759 vs. C. finmarchicus
Match: gi|592882875|gb|GAXK01075500.1| (TSA: Calanus finmarchicus comp6348727_c0_seq1 transcribed RNA sequence) HSP 1 Score: 40.817 bits (94), Expect = 3.234e-5 Identity = 23/51 (45.10%), Postives = 34/51 (66.67%), Query Frame = 0
Query: 1 MELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQITKKDGQKNTKTGR 51
ME+KF++ + F+E T DGR V TL T + + F Q KK+G+K+TK+ R
Sbjct: 15 MEMKFKLKEPFDETTPDGREVTTLVTFEN-SRFITVQTAKKEGEKSTKSTR 164
BLAST of EMLSAG00000004759 vs. C. finmarchicus
Match: gi|592766264|gb|GAXK01188304.1| (TSA: Calanus finmarchicus comp11284_c1_seq2 transcribed RNA sequence) HSP 1 Score: 40.817 bits (94), Expect = 8.931e-5 Identity = 25/69 (36.23%), Postives = 40/69 (57.97%), Query Frame = 0
Query: 1 MELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQITKKDGQKNTKTGRDFK-DGKYIQIIKVVGSD 68
MELKF+VG +F+E ++DGR V ++ +G Q KK QK+T++ R+ + I + V G+D
Sbjct: 221 MELKFKVGVEFDETSADGRDVKSICNFEGGKIVTI-QTAKKASQKSTRSVREMNGPNELIYTLTVEGND 424
BLAST of EMLSAG00000004759 vs. C. finmarchicus
Match: gi|592766265|gb|GAXK01188303.1| (TSA: Calanus finmarchicus comp11284_c1_seq1 transcribed RNA sequence) HSP 1 Score: 40.817 bits (94), Expect = 1.127e-4 Identity = 25/69 (36.23%), Postives = 40/69 (57.97%), Query Frame = 0
Query: 1 MELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQITKKDGQKNTKTGRDFK-DGKYIQIIKVVGSD 68
MELKF+VG +F+E ++DGR V ++ +G Q KK QK+T++ R+ + I + V G+D
Sbjct: 221 MELKFKVGVEFDETSADGRDVKSICNFEGGKIVTI-QTAKKASQKSTRSVREMNGPNELIYTLTVEGND 424
BLAST of EMLSAG00000004759 vs. L. salmonis peptides
Match: EMLSAP00000004759 (pep:novel supercontig:LSalAtl2s:LSalAtl2s250:476390:476626:1 gene:EMLSAG00000004759 transcript:EMLSAT00000004759 description:"augustus_masked-LSalAtl2s250-processed-gene-4.0") HSP 1 Score: 155.606 bits (392), Expect = 1.244e-50 Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
Query: 1 MELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQITKKDGQKNTKTGRDFKDGKYIQIIKVVGSDVQYTQVFVKA 78
MELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQITKKDGQKNTKTGRDFKDGKYIQIIKVVGSDVQYTQVFVKA
Sbjct: 1 MELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQITKKDGQKNTKTGRDFKDGKYIQIIKVVGSDVQYTQVFVKA 78
BLAST of EMLSAG00000004759 vs. L. salmonis peptides
Match: EMLSAP00000004641 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2426:5738:7142:1 gene:EMLSAG00000004641 transcript:EMLSAT00000004641 description:"maker-LSalAtl2s2426-augustus-gene-0.3") HSP 1 Score: 111.694 bits (278), Expect = 1.092e-32 Identity = 57/78 (73.08%), Postives = 65/78 (83.33%), Query Frame = 0
Query: 1 MELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQITKKDGQKNTKTGRDFKDGKYIQIIKVVGSDVQYTQVFVKA 78
MELKF+ GKKFEE TSDGR V+TL T+DGPTTF EQ+ KKDGQK+TKT RDFK+GK QI +VVGSDV+ TQVF KA
Sbjct: 60 MELKFEXGKKFEETTSDGRTVDTLVTLDGPTTFVSEQMAKKDGQKSTKTVRDFKEGKCTQITEVVGSDVKCTQVFEKA 137
BLAST of EMLSAG00000004759 vs. L. salmonis peptides
Match: EMLSAP00000004244 (pep:novel supercontig:LSalAtl2s:LSalAtl2s222:241073:242209:-1 gene:EMLSAG00000004244 transcript:EMLSAT00000004244 description:"snap_masked-LSalAtl2s222-processed-gene-2.5") HSP 1 Score: 90.8929 bits (224), Expect = 5.408e-25 Identity = 46/66 (69.70%), Postives = 52/66 (78.79%), Query Frame = 0
Query: 1 MELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQITKKDGQKNTKTGRDFKDGKYIQIIKVVG 66
MELKF+VGK+FEE SDGR V+TL TMDGPTTF EQ K DGQK+TKT RD KDGK Q+ +VVG
Sbjct: 33 MELKFKVGKEFEETXSDGRTVDTLVTMDGPTTFVPEQTAKNDGQKSTKTVRDIKDGKCTQVTEVVG 98
BLAST of EMLSAG00000004759 vs. L. salmonis peptides
Match: EMLSAP00000004823 (pep:novel supercontig:LSalAtl2s:LSalAtl2s254:346296:346535:1 gene:EMLSAG00000004823 transcript:EMLSAT00000004823 description:"augustus_masked-LSalAtl2s254-processed-gene-3.2") HSP 1 Score: 80.8777 bits (198), Expect = 2.170e-21 Identity = 44/75 (58.67%), Postives = 54/75 (72.00%), Query Frame = 0
Query: 1 MELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQITKKDGQKNTKTGRDFKDGKYIQIIKVVGSDVQYTQVF 75
M+LKF+VGKKF+E S+G V+TL MDG TTF E+I K D QK+TKT FKD K Q+ +VVGS V+ TQVF
Sbjct: 1 MQLKFEVGKKFKETPSEGCTVDTLIAMDGATTFISEKILKLDSQKSTKTICHFKDPKCTQVSEVVGSGVKCTQVF 75
BLAST of EMLSAG00000004759 vs. L. salmonis peptides
Match: EMLSAP00000008820 (pep:novel supercontig:LSalAtl2s:LSalAtl2s549:632112:633454:-1 gene:EMLSAG00000008820 transcript:EMLSAT00000008820 description:"maker-LSalAtl2s549-snap-gene-6.7") HSP 1 Score: 68.9366 bits (167), Expect = 1.399e-16 Identity = 39/64 (60.94%), Postives = 46/64 (71.88%), Query Frame = 0
Query: 15 TSDGRPVNTLDTMDGPTTFDFEQITKKDGQKNTKTGRDFKDGKYIQIIKVVGSDVQYTQVFVKA 78
TS+ R VNTL TTF EQI +KDGQK+TKT RDFKDGK Q +VVGSDV+ +QVF +A
Sbjct: 38 TSNVRTVNTL-----VTTFVSEQIAEKDGQKSTKTVRDFKDGKCTQATEVVGSDVKCSQVFEEA 96
BLAST of EMLSAG00000004759 vs. nr
Match: gi|155966175|gb|ABU41042.1| (putative cellular retinoic acid/retinol binding protein [Lepeophtheirus salmonis] >gi|225713860|gb|ACO12776.1| Cellular retinoic acid-binding protein 2 [Lepeophtheirus salmonis] >gi|290463031|gb|ADD24563.1| Cellular retinoic acid-binding protein 2 [Lepeophtheirus salmonis] >gi|290561270|gb|ADD38037.1| Cellular retinoic acid-binding protein 2 [Lepeophtheirus salmonis]) HSP 1 Score: 114.005 bits (284), Expect = 7.339e-31 Identity = 58/78 (74.36%), Postives = 66/78 (84.62%), Query Frame = 0
Query: 1 MELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQITKKDGQKNTKTGRDFKDGKYIQIIKVVGSDVQYTQVFVKA 78
MELKF+VGKKFEE TSDGR V+TL T+DGPTTF EQ+ KKDGQK+TKT RDFK+GK QI +VVGSDV+ TQVF KA
Sbjct: 60 MELKFEVGKKFEETTSDGRTVDTLVTLDGPTTFVSEQMAKKDGQKSTKTVRDFKEGKCTQITEVVGSDVKCTQVFEKA 137
BLAST of EMLSAG00000004759 vs. nr
Match: gi|225712974|gb|ACO12333.1| (Cellular retinoic acid-binding protein 2 [Lepeophtheirus salmonis]) HSP 1 Score: 113.62 bits (283), Expect = 7.964e-31 Identity = 58/78 (74.36%), Postives = 66/78 (84.62%), Query Frame = 0
Query: 1 MELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQITKKDGQKNTKTGRDFKDGKYIQIIKVVGSDVQYTQVFVKA 78
MELKF+VGKKFEE TSDGR V+TL T+DGPTTF EQ+ KKDGQK+TKT RDFK+GK QI +VVGSDV+ TQVF KA
Sbjct: 56 MELKFEVGKKFEETTSDGRTVDTLVTLDGPTTFVSEQMAKKDGQKSTKTVRDFKEGKCTQITEVVGSDVKCTQVFEKA 133
BLAST of EMLSAG00000004759 vs. nr
Match: gi|225718480|gb|ACO15086.1| (Cellular retinoic acid-binding protein 2 [Caligus clemensi]) HSP 1 Score: 112.464 bits (280), Expect = 2.726e-30 Identity = 58/78 (74.36%), Postives = 65/78 (83.33%), Query Frame = 0
Query: 1 MELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQITKKDGQKNTKTGRDFKDGKYIQIIKVVGSDVQYTQVFVKA 78
MELKF+VGKKFEE TSDGR V+TL T+DGPTTF EQI KKDGQK+ KT RDFKDGK Q+ +VVGSDV+ TQVF KA
Sbjct: 60 MELKFEVGKKFEETTSDGRVVDTLVTLDGPTTFVSEQIAKKDGQKSAKTIRDFKDGKCTQMTEVVGSDVKCTQVFEKA 137
BLAST of EMLSAG00000004759 vs. nr
Match: gi|225710698|gb|ACO11195.1| (Cellular retinoic acid-binding protein 2 [Caligus rogercresseyi]) HSP 1 Score: 105.145 bits (261), Expect = 2.084e-27 Identity = 54/77 (70.13%), Postives = 62/77 (80.52%), Query Frame = 0
Query: 1 MELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQITKKDGQKNTKTGRDFKDGKYIQIIKVVGSDVQYTQVFVK 77
MELKF+VGKKFEE TSDGR V+TL T++GPT F EQ KKDG K+TKT RDF+DGK QI +VVGSDV+ TQVF K
Sbjct: 60 MELKFEVGKKFEETTSDGRLVDTLVTLEGPTKFVSEQTAKKDGHKSTKTIRDFQDGKCTQITEVVGSDVKCTQVFEK 136
BLAST of EMLSAG00000004759 vs. nr
Match: gi|225710890|gb|ACO11291.1| (Cellular retinoic acid-binding protein 2 [Caligus rogercresseyi]) HSP 1 Score: 105.145 bits (261), Expect = 2.509e-27 Identity = 54/77 (70.13%), Postives = 62/77 (80.52%), Query Frame = 0
Query: 1 MELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQITKKDGQKNTKTGRDFKDGKYIQIIKVVGSDVQYTQVFVK 77
MELKF+VGKKFEE TSDGR V+TL T++GPT F EQ KKDG K+TKT RDF+DGK QI +VVGSDV+ TQVF K
Sbjct: 60 MELKFEVGKKFEETTSDGRLVDTLVTLEGPTKFVSEQTAKKDGHKSTKTIRDFQDGKCTQITEVVGSDVKCTQVFEK 136
BLAST of EMLSAG00000004759 vs. nr
Match: gi|225709644|gb|ACO10668.1| (Cellular retinoic acid-binding protein 2 [Caligus rogercresseyi]) HSP 1 Score: 102.834 bits (255), Expect = 1.554e-26 Identity = 53/77 (68.83%), Postives = 62/77 (80.52%), Query Frame = 0
Query: 1 MELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQITKKDGQKNTKTGRDFKDGKYIQIIKVVGSDVQYTQVFVK 77
M+LKF+VGKKFEE TSDGR V+TL T++GPT F EQ KKDG K+TKT RDF+DGK QI +VVGSDV+ TQVF K
Sbjct: 60 MKLKFEVGKKFEETTSDGRLVDTLVTLEGPTKFVSEQTAKKDGHKSTKTIRDFQDGKCTQITEVVGSDVKCTQVFEK 136
BLAST of EMLSAG00000004759 vs. nr
Match: gi|961375138|gb|ALS04313.1| (cellular retinoic acid-binding protein 2 [Acartia pacifica] >gi|961375142|gb|ALS04315.1| cellular retinoic acid-binding protein 2 [Acartia pacifica]) HSP 1 Score: 60.077 bits (144), Expect = 1.110e-9 Identity = 34/75 (45.33%), Postives = 48/75 (64.00%), Query Frame = 0
Query: 1 MELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQITKKDGQKNTKTGRDFKDGKYIQIIKVVGSDVQYTQVF 75
MELKF+VG++F+E T DGR V + T+DG F EQ KK+GQK+TK+ R+F + I + + G D+ Q F
Sbjct: 60 MELKFKVGEEFDETTPDGREVKAIVTLDG-NKFVCEQKAKKEGQKSTKSIREFNGDECIYTMTIDGMDLVCVQKF 133
BLAST of EMLSAG00000004759 vs. nr
Match: gi|961375140|gb|ALS04314.1| (cellular retinoic acid-binding protein 2 [Acartia pacifica]) HSP 1 Score: 59.6918 bits (143), Expect = 1.362e-9 Identity = 34/75 (45.33%), Postives = 48/75 (64.00%), Query Frame = 0
Query: 1 MELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQITKKDGQKNTKTGRDFKDGKYIQIIKVVGSDVQYTQVF 75
MELKF+VG++F+E T DGR V + T+DG F EQ KK+GQK+TK+ R+F + I + + G D+ Q F
Sbjct: 60 MELKFKVGEEFDETTPDGREVKAIVTLDG-NKFVCEQKAKKEGQKSTKSIREFNGEECIYTMTIDGMDLVCVQKF 133
BLAST of EMLSAG00000004759 vs. nr
Match: gi|961375136|gb|ALS04312.1| (cellular retinoic acid-binding protein 2 [Acartia pacifica]) HSP 1 Score: 58.151 bits (139), Expect = 4.545e-9 Identity = 33/75 (44.00%), Postives = 48/75 (64.00%), Query Frame = 0
Query: 1 MELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQITKKDGQKNTKTGRDFKDGKYIQIIKVVGSDVQYTQVF 75
ME+KF+VG++F+E T DGR V + T+DG F EQ KK+GQK+TK+ R+F + I + + G D+ Q F
Sbjct: 60 MEVKFKVGEEFDETTPDGREVKAIVTLDG-NKFVCEQKAKKEGQKSTKSIREFNGDECIYTMTIDGMDLVCVQKF 133
BLAST of EMLSAG00000004759 vs. nr
Match: gi|961376306|gb|ALS04897.1| (cellular retinoic acid-binding protein 2 [Pseudodiaptomus poplesia]) HSP 1 Score: 52.7582 bits (125), Expect = 5.529e-7 Identity = 28/68 (41.18%), Postives = 43/68 (63.24%), Query Frame = 0
Query: 1 MELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQITKKDGQKNTKTGRDFKDGKYIQIIKVVGSD 68
MELKF++G++FEE T DGR V L T+DG ++ KKDG +TK+ R+F + + + + G+D
Sbjct: 60 MELKFKIGEEFEETTQDGREVTALVTLDGNKLVTVQK-AKKDGVASTKSIREFNGDEVVCTLTIDGND 126
BLAST of EMLSAG00000004759 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold747_size103044-snap-gene-0.14 (protein:Tk12097 transcript:maker-scaffold747_size103044-snap-gene-0.14-mRNA-1 annotation:"cellular retinoic acid-binding protein 2") HSP 1 Score: 66.2402 bits (160), Expect = 5.201e-16 Identity = 35/75 (46.67%), Postives = 52/75 (69.33%), Query Frame = 0
Query: 1 MELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQITKKDGQKNTKTGRDFKDGKYIQIIKVVGSDVQYTQVF 75
MELKF++G++F+E T DGR V + +G +F Q KKDGQK+TK+ R+FK + IQ ++V+G+D+ TQ F
Sbjct: 59 MELKFKLGEEFDETTPDGREVKAVVVQEG-NSFISTQTAKKDGQKSTKSVREFKGDEVIQTMEVLGTDIVCTQTF 132
BLAST of EMLSAG00000004759 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold25_size650667-snap-gene-0.20 (protein:Tk06682 transcript:maker-scaffold25_size650667-snap-gene-0.20-mRNA-1 annotation:"cellular retinoic acid-binding protein 2") HSP 1 Score: 66.2402 bits (160), Expect = 5.201e-16 Identity = 35/75 (46.67%), Postives = 52/75 (69.33%), Query Frame = 0
Query: 1 MELKFQVGKKFEEATSDGRPVNTLDTMDGPTTFDFEQITKKDGQKNTKTGRDFKDGKYIQIIKVVGSDVQYTQVF 75
MELKF++G++F+E T DGR V + +G +F Q KKDGQK+TK+ R+FK + IQ ++V+G+D+ TQ F
Sbjct: 59 MELKFKLGEEFDETTPDGREVKAVVVQEG-NSFISTQTAKKDGQKSTKSVREFKGDEVIQTMEVLGTDIVCTQTF 132 The following BLAST results are available for this feature:
BLAST of EMLSAG00000004759 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 13
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BLAST of EMLSAG00000004759 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000004759 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 5
BLAST of EMLSAG00000004759 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000004759 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000004759 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 10
BLAST of EMLSAG00000004759 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 2
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s250:476390..476626+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000004759-687525 ID=EMLSAG00000004759-687525|Name=EMLSAG00000004759|organism=Lepeophtheirus salmonis|type=gene|length=237bp|location=Sequence derived from alignment at LSalAtl2s250:476390..476626+ (Lepeophtheirus salmonis)back to top Add to Basket
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