EMLSAG00000000060, EMLSAG00000000060-682826 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000060 vs. C. finmarchicus
Match: gi|592939839|gb|GAXK01018714.1| (TSA: Calanus finmarchicus comp33055_c0_seq6 transcribed RNA sequence) HSP 1 Score: 50.0618 bits (118), Expect = 2.661e-5 Identity = 33/91 (36.26%), Postives = 49/91 (53.85%), Query Frame = 0 Query: 448 IALTEEEY--RSQXPSIPVVIFGRGSSAIRDWTSKSENFEFGFEINETLLAMSSSDSSHQKQTPVQNRSPPEKENENIPLDRIDRAILSFG 536 + +E+E+ R S VVIF S A +DW S F FGF++NE L+A +++ + P Q + P + P+D +D AILSFG Sbjct: 2817 VVTSEDEFNKRKADNSAAVVIF---SEADQDWGSAE--FTFGFDVNEDLVANTNTVPMVENSHPQQMWAMPGSMGQLTPIDTVDGAILSFG 3074
BLAST of EMLSAG00000000060 vs. C. finmarchicus
Match: gi|592939840|gb|GAXK01018713.1| (TSA: Calanus finmarchicus comp33055_c0_seq5 transcribed RNA sequence) HSP 1 Score: 50.0618 bits (118), Expect = 2.662e-5 Identity = 33/91 (36.26%), Postives = 49/91 (53.85%), Query Frame = 0 Query: 448 IALTEEEY--RSQXPSIPVVIFGRGSSAIRDWTSKSENFEFGFEINETLLAMSSSDSSHQKQTPVQNRSPPEKENENIPLDRIDRAILSFG 536 + +E+E+ R S VVIF S A +DW S F FGF++NE L+A +++ + P Q + P + P+D +D AILSFG Sbjct: 2817 VVTSEDEFNKRKADNSAAVVIF---SEADQDWGSAE--FTFGFDVNEDLVANTNTVPMVENSHPQQMWAMPGSMGQLTPIDTVDGAILSFG 3074
BLAST of EMLSAG00000000060 vs. C. finmarchicus
Match: gi|592939841|gb|GAXK01018712.1| (TSA: Calanus finmarchicus comp33055_c0_seq4 transcribed RNA sequence) HSP 1 Score: 50.0618 bits (118), Expect = 2.662e-5 Identity = 33/91 (36.26%), Postives = 49/91 (53.85%), Query Frame = 0 Query: 448 IALTEEEY--RSQXPSIPVVIFGRGSSAIRDWTSKSENFEFGFEINETLLAMSSSDSSHQKQTPVQNRSPPEKENENIPLDRIDRAILSFG 536 + +E+E+ R S VVIF S A +DW S F FGF++NE L+A +++ + P Q + P + P+D +D AILSFG Sbjct: 2817 VVTSEDEFNKRKADNSAAVVIF---SEADQDWGSAE--FTFGFDVNEDLVANTNTVPMVENSHPQQMWAMPGSMGQLTPIDTVDGAILSFG 3074
BLAST of EMLSAG00000000060 vs. C. finmarchicus
Match: gi|592939842|gb|GAXK01018711.1| (TSA: Calanus finmarchicus comp33055_c0_seq3 transcribed RNA sequence) HSP 1 Score: 50.0618 bits (118), Expect = 2.663e-5 Identity = 33/91 (36.26%), Postives = 49/91 (53.85%), Query Frame = 0 Query: 448 IALTEEEY--RSQXPSIPVVIFGRGSSAIRDWTSKSENFEFGFEINETLLAMSSSDSSHQKQTPVQNRSPPEKENENIPLDRIDRAILSFG 536 + +E+E+ R S VVIF S A +DW S F FGF++NE L+A +++ + P Q + P + P+D +D AILSFG Sbjct: 2817 VVTSEDEFNKRKADNSAAVVIF---SEADQDWGSAE--FTFGFDVNEDLVANTNTVPMVENSHPQQMWAMPGSMGQLTPIDTVDGAILSFG 3074
BLAST of EMLSAG00000000060 vs. C. finmarchicus
Match: gi|592939843|gb|GAXK01018710.1| (TSA: Calanus finmarchicus comp33055_c0_seq2 transcribed RNA sequence) HSP 1 Score: 50.0618 bits (118), Expect = 2.664e-5 Identity = 33/91 (36.26%), Postives = 49/91 (53.85%), Query Frame = 0 Query: 448 IALTEEEY--RSQXPSIPVVIFGRGSSAIRDWTSKSENFEFGFEINETLLAMSSSDSSHQKQTPVQNRSPPEKENENIPLDRIDRAILSFG 536 + +E+E+ R S VVIF S A +DW S F FGF++NE L+A +++ + P Q + P + P+D +D AILSFG Sbjct: 2817 VVTSEDEFNKRKADNSAAVVIF---SEADQDWGSAE--FTFGFDVNEDLVANTNTVPMVENSHPQQMWAMPGSMGQLTPIDTVDGAILSFG 3074
BLAST of EMLSAG00000000060 vs. C. finmarchicus
Match: gi|592939844|gb|GAXK01018709.1| (TSA: Calanus finmarchicus comp33055_c0_seq1 transcribed RNA sequence) HSP 1 Score: 50.0618 bits (118), Expect = 2.665e-5 Identity = 33/91 (36.26%), Postives = 49/91 (53.85%), Query Frame = 0 Query: 448 IALTEEEY--RSQXPSIPVVIFGRGSSAIRDWTSKSENFEFGFEINETLLAMSSSDSSHQKQTPVQNRSPPEKENENIPLDRIDRAILSFG 536 + +E+E+ R S VVIF S A +DW S F FGF++NE L+A +++ + P Q + P + P+D +D AILSFG Sbjct: 2817 VVTSEDEFNKRKADNSAAVVIF---SEADQDWGSAE--FTFGFDVNEDLVANTNTVPMVENSHPQQMWAMPGSMGQLTPIDTVDGAILSFG 3074
BLAST of EMLSAG00000000060 vs. C. finmarchicus
Match: gi|592792548|gb|GAXK01162020.1| (TSA: Calanus finmarchicus comp34622_c1_seq2 transcribed RNA sequence) HSP 1 Score: 41.2022 bits (95), Expect = 1.111e-2 Identity = 31/95 (32.63%), Postives = 43/95 (45.26%), Query Frame = 0 Query: 437 ASTILKSGDIAIALTEEEYRSQXPSI---PVVIFGRGSSAIRDWTSKSENFEFGFEINETLLAMSSSDSSHQKQTPVQN--RSPPEKENENIPLD 526 S + +S I + E + P I PVVI RD F FGFE+NE+LLAMS +D +N +S PEK ++ +D Sbjct: 3496 GSKVARSSQSNIKPSSTEVKQSSPEINLPPVVILNSS----RDNLETEGGFTFGFEVNESLLAMSCADKCQISDKVSENGDKSEPEKVGKSDSID 3768
BLAST of EMLSAG00000000060 vs. C. finmarchicus
Match: gi|592792549|gb|GAXK01162019.1| (TSA: Calanus finmarchicus comp34622_c1_seq1 transcribed RNA sequence) HSP 1 Score: 41.2022 bits (95), Expect = 1.111e-2 Identity = 31/95 (32.63%), Postives = 43/95 (45.26%), Query Frame = 0 Query: 437 ASTILKSGDIAIALTEEEYRSQXPSI---PVVIFGRGSSAIRDWTSKSENFEFGFEINETLLAMSSSDSSHQKQTPVQN--RSPPEKENENIPLD 526 S + +S I + E + P I PVVI RD F FGFE+NE+LLAMS +D +N +S PEK ++ +D Sbjct: 3517 GSKVARSSQSNIKPSSTEVKQSSPEINLPPVVILNSS----RDNLETEGGFTFGFEVNESLLAMSCADKCQISDKVSENGDKSEPEKVGKSDSID 3789
BLAST of EMLSAG00000000060 vs. L. salmonis peptides
Match: EMLSAP00000000060 (pep:novel supercontig:LSalAtl2s:LSalAtl2s100:152706:156735:1 gene:EMLSAG00000000060 transcript:EMLSAT00000000060 description:"augustus_masked-LSalAtl2s100-processed-gene-1.9") HSP 1 Score: 1216.83 bits (3147), Expect = 0.000e+0 Identity = 608/608 (100.00%), Postives = 608/608 (100.00%), Query Frame = 0 Query: 1 MEKETHHGDSVIRSPPETPPSSSTFPAYLSMYPKGSGFDNIAAPARNTESEKLRKIRRRKELKEFRKYNKIHEYKTQGDDNSYNFDAVLESLGEQNGTLNNNNSNNNNNSGNSTSNNGNKDNRKDKRVRRPVTRRRSNNSGVSNNSVKTNNTNGASSSSEENVLKDFDKDEDEDELEDDKMSSSSLVGGGGGXVRDSEXTLFSKPSKIERGLSKSSENLSHYSSENLSSFTKVTNKKQKWKKKNAHSVEIPDNFNINNNNNNNSVTVNIINNNNIINTSSTSMSTSSANIGGKGGNLSSRYNGYNLRNREIEATRPDLDYNARDFPPLDTPIEDGAGSVVPTNGISPTWSKPGPSSSVSSSSSSVINERTEEEEPPSAAPQKVSVDLPDVSHCQPPPINSNAPNNHHLPDLTAQAVEAVTSSSGSITPQETKVELFASTILKSGDIAIALTEEEYRSQXPSIPVVIFGRGSSAIRDWTSKSENFEFGFEINETLLAMSSSDSSHQKQTPVQNRSPPEKENENIPLDRIDRAILSFGDSVTNLTVLGDEXXADSSPQLDNSIHLPPYVEEPITFNYNEVINYLENAWLDSLKDTQQQQQKRHPVASSAY 608 MEKETHHGDSVIRSPPETPPSSSTFPAYLSMYPKGSGFDNIAAPARNTESEKLRKIRRRKELKEFRKYNKIHEYKTQGDDNSYNFDAVLESLGEQNGTLNNNNSNNNNNSGNSTSNNGNKDNRKDKRVRRPVTRRRSNNSGVSNNSVKTNNTNGASSSSEENVLKDFDKDEDEDELEDDKMSSSSLVGGGGGXVRDSEXTLFSKPSKIERGLSKSSENLSHYSSENLSSFTKVTNKKQKWKKKNAHSVEIPDNFNINNNNNNNSVTVNIINNNNIINTSSTSMSTSSANIGGKGGNLSSRYNGYNLRNREIEATRPDLDYNARDFPPLDTPIEDGAGSVVPTNGISPTWSKPGPSSSVSSSSSSVINERTEEEEPPSAAPQKVSVDLPDVSHCQPPPINSNAPNNHHLPDLTAQAVEAVTSSSGSITPQETKVELFASTILKSGDIAIALTEEEYRSQXPSIPVVIFGRGSSAIRDWTSKSENFEFGFEINETLLAMSSSDSSHQKQTPVQNRSPPEKENENIPLDRIDRAILSFGDSVTNLTVLGDEXXADSSPQLDNSIHLPPYVEEPITFNYNEVINYLENAWLDSLKDTQQQQQKRHPVASSAY Sbjct: 1 MEKETHHGDSVIRSPPETPPSSSTFPAYLSMYPKGSGFDNIAAPARNTESEKLRKIRRRKELKEFRKYNKIHEYKTQGDDNSYNFDAVLESLGEQNGTLNNNNSNNNNNSGNSTSNNGNKDNRKDKRVRRPVTRRRSNNSGVSNNSVKTNNTNGASSSSEENVLKDFDKDEDEDELEDDKMSSSSLVGGGGGXVRDSEXTLFSKPSKIERGLSKSSENLSHYSSENLSSFTKVTNKKQKWKKKNAHSVEIPDNFNINNNNNNNSVTVNIINNNNIINTSSTSMSTSSANIGGKGGNLSSRYNGYNLRNREIEATRPDLDYNARDFPPLDTPIEDGAGSVVPTNGISPTWSKPGPSSSVSSSSSSVINERTEEEEPPSAAPQKVSVDLPDVSHCQPPPINSNAPNNHHLPDLTAQAVEAVTSSSGSITPQETKVELFASTILKSGDIAIALTEEEYRSQXPSIPVVIFGRGSSAIRDWTSKSENFEFGFEINETLLAMSSSDSSHQKQTPVQNRSPPEKENENIPLDRIDRAILSFGDSVTNLTVLGDEXXADSSPQLDNSIHLPPYVEEPITFNYNEVINYLENAWLDSLKDTQQQQQKRHPVASSAY 608 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000060 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000000060 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 8
BLAST of EMLSAG00000000060 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000000060 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000060 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000000060 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000000060 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s100:152706..156735+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000060-682826 ID=EMLSAG00000000060-682826|Name=EMLSAG00000000060|organism=Lepeophtheirus salmonis|type=gene|length=4030bp|location=Sequence derived from alignment at LSalAtl2s100:152706..156735+ (Lepeophtheirus salmonis)back to top Add to Basket
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