EMLSAG00000000147, EMLSAG00000000147-682913 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000000147
Unique NameEMLSAG00000000147-682913
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: no visible phenotype
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
X F199 female
  1. PreAdult2
  2. Adult
 No visible phenotype
no visible phenotype 		17.03.2015 - 10:01
22.04.2015 - 00:00
Homology
[Close]
BLAST of EMLSAG00000000147 vs. C. finmarchicus
Match: gi|592865464|gb|GAXK01092098.1| (TSA: Calanus finmarchicus comp77098_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 73.9442 bits (180), Expect = 5.048e-16
Identity = 43/98 (43.88%), Postives = 59/98 (60.20%), Query Frame = 0 
Query:    1 MKLLLIFVFLASLGAVYGSQNWHALRTTFSLLPFHGF-WSQPRT--ERQARSKGYIKISDCNDINAFPGSRYIPNYDHPNIVFIYDVNGYIAGIQSIV 95
            + +L +   +AS  A   +Q W  LRTTF + PF GF + QPRT  E +A   G+ KIS C D   F G+RY+  + H +++ I+D  GYIAG QSIV
Sbjct:    3 LNVLSLACLVASATA---AQKWPGLRTTFGVNPFGGFFYPQPRTIAEAEAEGSGWHKISSCGDGGKFLGNRYVEQFGH-SLILIFDDAGYIAGSQSIV 284
[Close]
BLAST of EMLSAG00000000147 vs. C. finmarchicus
Match: gi|592865465|gb|GAXK01092097.1| (TSA: Calanus finmarchicus comp77098_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 73.9442 bits (180), Expect = 6.647e-16
Identity = 43/98 (43.88%), Postives = 59/98 (60.20%), Query Frame = 0 
Query:    1 MKLLLIFVFLASLGAVYGSQNWHALRTTFSLLPFHGF-WSQPRT--ERQARSKGYIKISDCNDINAFPGSRYIPNYDHPNIVFIYDVNGYIAGIQSIV 95
            + +L +   +AS  A   +Q W  LRTTF + PF GF + QPRT  E +A   G+ KIS C D   F G+RY+  + H +++ I+D  GYIAG QSIV
Sbjct:    3 LNVLSLACLVASATA---AQKWPGLRTTFGVNPFGGFFYPQPRTIAEAEAEGSGWHKISSCGDGGKFLGNRYVEQFGH-SLILIFDDAGYIAGSQSIV 284
[Close]
BLAST of EMLSAG00000000147 vs. C. finmarchicus
Match: gi|592908602|gb|GAXK01049773.1| (TSA: Calanus finmarchicus comp31018_c2_seq1 transcribed RNA sequence)

HSP 1 Score: 67.3958 bits (163), Expect = 3.387e-13
Identity = 36/77 (46.75%), Postives = 49/77 (63.64%), Query Frame = 0 
Query:   19 SQNWHALRTTFSLLPFHGFWSQPRTERQARSKGYIKISDCNDINAFPGSRYIPNYDHPNIVFIYDVNGYIAGIQSIV 95
            +Q W AL+TTFS+ PF GF SQPRT  +A + G+  ++ C+    F G RY    D  ++V IYD  GYIAG QS++
Sbjct: 1060 AQKWPALKTTFSINPFSGFNSQPRTSSEAEAAGWELLASCD--GKFLGHRYANPADF-SLVLIYDDAGYIAGSQSVI 1281
[Close]
BLAST of EMLSAG00000000147 vs. C. finmarchicus
Match: gi|592928774|gb|GAXK01029771.1| (TSA: Calanus finmarchicus comp932928_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 57.7658 bits (138), Expect = 4.376e-10
Identity = 37/94 (39.36%), Postives = 54/94 (57.45%), Query Frame = 0 
Query:   18 GSQNWHALRTTFSLLPFHGFWSQPRTERQARSKGYIKISDCNDINAFPGSRYIPNYDHPNIVFIYDVNGYIAGIQSIVDQVRGI--SNDLSSQP 109
             ++NW    TTF       F  +PRT  +AR  G++K+S C+    F G RY  + D P+ + IYD  GYIAG+QS+V  V+ +  S +L+ QP
Sbjct:   65 ATENWPNFSTTFP-----HFHLEPRTTSEAREAGWMKLSSCD--GKFLGHRYAKHSD-PSKILIYDDAGYIAGVQSVV-PVKNVHPSVNLTLQP 319
[Close]
BLAST of EMLSAG00000000147 vs. C. finmarchicus
Match: gi|592865463|gb|GAXK01092099.1| (TSA: Calanus finmarchicus comp77098_c1_seq3 transcribed RNA sequence)

HSP 1 Score: 39.2762 bits (90), Expect = 2.859e-4
Identity = 21/42 (50.00%), Postives = 27/42 (64.29%), Query Frame = 0 
Query:   54 KISDCNDINAFPGSRYIPNYDHPNIVFIYDVNGYIAGIQSIV 95
            KIS C D   F G+RY+  Y   +++ I+D  GYIAG QSIV
Sbjct:    1 KISSCGDGGKFLGNRYV-TYFGASLILIFDDAGYIAGSQSIV 123
[Close]
BLAST of EMLSAG00000000147 vs. C. finmarchicus
Match: gi|592764598|gb|GAXK01189970.1| (TSA: Calanus finmarchicus comp263214_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 30.8018 bits (68), Expect = 7.860e-1
Identity = 15/49 (30.61%), Postives = 23/49 (46.94%), Query Frame = 0 
Query:   23 HALRTTFSLLPFHGFWSQPRTERQARSKGYIKISDCNDINAFPGSRYIP 71
            H L TT +  PF   WS+   E + R K    +S+ ND+  +     +P
Sbjct:   84 HRLYTTMAYTPFPLKWSEITPEEKRRVKAAWPVSNINDLVRYENGMVLP 230
[Close]
BLAST of EMLSAG00000000147 vs. C. finmarchicus
Match: gi|592764594|gb|GAXK01189974.1| (TSA: Calanus finmarchicus comp263214_c1_seq6 transcribed RNA sequence)

HSP 1 Score: 30.0314 bits (66), Expect = 1.304e+0
Identity = 15/49 (30.61%), Postives = 23/49 (46.94%), Query Frame = 0 
Query:   23 HALRTTFSLLPFHGFWSQPRTERQARSKGYIKISDCNDINAFPGSRYIP 71
            H L TT +  PF   WS+   E + R K    +S+ ND+  +     +P
Sbjct:   84 HRLYTTMAYTPFPLKWSEITPEEKRRVKAAWPVSNINDLVRYENGMVLP 230
[Close]
BLAST of EMLSAG00000000147 vs. C. finmarchicus
Match: gi|592764596|gb|GAXK01189972.1| (TSA: Calanus finmarchicus comp263214_c1_seq4 transcribed RNA sequence)

HSP 1 Score: 30.0314 bits (66), Expect = 1.364e+0
Identity = 15/49 (30.61%), Postives = 23/49 (46.94%), Query Frame = 0 
Query:   23 HALRTTFSLLPFHGFWSQPRTERQARSKGYIKISDCNDINAFPGSRYIP 71
            H L TT +  PF   WS+   E + R K    +S+ ND+  +     +P
Sbjct:   84 HRLYTTMAYTPFPLKWSEITPEEKRRVKAAWPVSNINDLVRYENGMVLP 230
[Close]
BLAST of EMLSAG00000000147 vs. C. finmarchicus
Match: gi|592883730|gb|GAXK01074645.1| (TSA: Calanus finmarchicus comp2284731_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 27.7202 bits (60), Expect = 8.806e+0
Identity = 11/32 (34.38%), Postives = 18/32 (56.25%), Query Frame = 0 
Query:   35 HGFWSQPRTERQARSKGYIKISDCNDINAFPG 66
            H  W  PR   +  S GYI+  + +++NA+ G
Sbjct:  179 HEKWETPRDSWKTTSDGYIEAFEIDNLNAYTG 274
[Close]
BLAST of EMLSAG00000000147 vs. L. salmonis peptides
Match: EMLSAP00000000147 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1022:45727:49241:1 gene:EMLSAG00000000147 transcript:EMLSAT00000000147 description:"snap_masked-LSalAtl2s1022-processed-gene-0.19")

HSP 1 Score: 228.794 bits (582), Expect = 2.679e-78
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 
Query:    1 MKLLLIFVFLASLGAVYGSQNWHALRTTFSLLPFHGFWSQPRTERQARSKGYIKISDCNDINAFPGSRYIPNYDHPNIVFIYDVNGYIAGIQSIVDQVRGISNDLSSQPY 110
            MKLLLIFVFLASLGAVYGSQNWHALRTTFSLLPFHGFWSQPRTERQARSKGYIKISDCNDINAFPGSRYIPNYDHPNIVFIYDVNGYIAGIQSIVDQVRGISNDLSSQPY
Sbjct:    1 MKLLLIFVFLASLGAVYGSQNWHALRTTFSLLPFHGFWSQPRTERQARSKGYIKISDCNDINAFPGSRYIPNYDHPNIVFIYDVNGYIAGIQSIVDQVRGISNDLSSQPY 110
[Close]
BLAST of EMLSAG00000000147 vs. L. salmonis peptides
Match: EMLSAP00000009656 (pep:novel supercontig:LSalAtl2s:LSalAtl2s620:108361:109875:1 gene:EMLSAG00000009656 transcript:EMLSAT00000009656 description:"augustus_masked-LSalAtl2s620-processed-gene-1.1")

HSP 1 Score: 164.081 bits (414), Expect = 7.891e-51
Identity = 75/97 (77.32%), Postives = 86/97 (88.66%), Query Frame = 0 
Query:    1 MKLLLIFVFLASLGAVYGSQNWHALRTTFSLLPFHGFWSQPRTERQARSKGYIKISDCNDINAFPGSRYIPNYDHPNIVFIYDVNGYIAGIQSIVDQ 97
            MKLLL F FL SLGAV  +++W++LRTTFSLLPF GFWSQPR E++ARS+GY KISDC+D  +FPG+RYIPNYDHPNIV IYDVNGYIAGIQSIVDQ
Sbjct:    1 MKLLLTFSFLVSLGAVNAAZDWYSLRTTFSLLPFTGFWSQPRLEKEARSEGYTKISDCSDGESFPGNRYIPNYDHPNIVLIYDVNGYIAGIQSIVDQ 97
[Close]
BLAST of EMLSAG00000000147 vs. L. salmonis peptides
Match: EMLSAP00000001381 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1231:63552:64820:1 gene:EMLSAG00000001381 transcript:EMLSAT00000001381 description:"maker-LSalAtl2s1231-snap-gene-0.11")

HSP 1 Score: 51.6026 bits (122), Expect = 3.154e-9
Identity = 27/67 (40.30%), Postives = 40/67 (59.70%), Query Frame = 0 
Query:   51 GYIKISDCNDIN-AFPGSRYIPNYDHPNIVFIYDVNGYIAGIQSIVDQ------VRGISNDLSSQPY 110
            G++++  CN  +  +PG R+I N  + NI+ IYD+NG IAGIQS+V++       R   ND   Q Y
Sbjct:    1 GWLQVGXCNQSDRTYPGERFIRNVKYNNIILIYDINGKIAGIQSVVEKRFDNNPFRNYENDSMYQHY 67
[Close]
BLAST of EMLSAG00000000147 vs. nr
Match: gi|908444415|ref|XP_013080143.1| (PREDICTED: uncharacterized protein LOC106065788 [Biomphalaria glabrata])

HSP 1 Score: 77.0258 bits (188), Expect = 8.969e-15
Identity = 40/89 (44.94%), Postives = 58/89 (65.17%), Query Frame = 0 
Query:   19 SQNWHALRTTFSLLPFHG--FWSQPRTERQARSKGYIKISDCNDINAFPGSRYIPNYDHPNIVFIYDVNGYIAGIQSIVDQVRGISNDL 105
             + W+AL+TT+   PF    F   PRTE +A  +G++KIS CN+ +AF GSRY+ + D+  +V ++D NGYIAGIQ+      G+SN L
Sbjct:   28 EKTWNALKTTWGANPFSSDNFVEMPRTEEKAIKEGFVKISGCNESSAFRGSRYVKSGDYA-VVLLFDANGYIAGIQT------GVSNHL 109
[Close]
BLAST of EMLSAG00000000147 vs. nr
Match: gi|871210918|ref|XP_012944492.1| (PREDICTED: uncharacterized protein LOC101862243 [Aplysia californica])

HSP 1 Score: 69.707 bits (169), Expect = 5.524e-12
Identity = 40/100 (40.00%), Postives = 59/100 (59.00%), Query Frame = 0 
Query:    1 MKLLLIFVFLASLGAVYGSQN---WHALRTTFSLLPFHG--FWSQPRTERQARSKGYIKISDCNDINAFPGSRYIPNYDHPNIVFIYDVNGYIAGIQSIV 95
            ++L ++   L S  A+  S +   W+ L+ T+ L PF    F   PRTE QA S+G+ KIS C+    F G+RY+   D+  +V +YDV GYIAGIQ+ +
Sbjct:    2 LRLAVLVCALCSSHALLFSTSGGLWNNLKVTWGLNPFSSSTFVGMPRTETQAISQGFKKISSCSTTGTFRGNRYVKGNDYA-VVLLYDVKGYIAGIQASI 100
[Close]
BLAST of EMLSAG00000000147 vs. nr
Match: gi|762098513|ref|XP_011431649.1| (PREDICTED: uncharacterized protein LOC105331236 [Crassostrea gigas])

HSP 1 Score: 69.707 bits (169), Expect = 6.222e-12
Identity = 41/95 (43.16%), Postives = 57/95 (60.00%), Query Frame = 0 
Query:    3 LLLIFVFLASLGAVYGSQN--WHALRTTFSLLPFHG--FWSQPRTERQARSKGYIKISDCNDINAFPGSRYIPNYDHPNIVFIYDVNGYIAGIQS 93
            ++LI       G + GS++  W  L+ T+ + PF    F + PRTE +A+S G+  IS C   N F G RY+ N D P ++ IYDVNGYIAGIQ+
Sbjct:    9 VILIVNITICHGWLLGSKSHPWDGLKVTWGINPFSSSSFVNMPRTESEAKSSGFTMISGCGHAN-FLGKRYMKNND-PAVILIYDVNGYIAGIQA 101
[Close]
BLAST of EMLSAG00000000147 vs. nr
Match: gi|1040778374|gb|JAS04240.1| (hypothetical protein [Pinctada fucata] >gi|1040778376|gb|JAS04241.1| hypothetical protein [Pinctada fucata])

HSP 1 Score: 68.5514 bits (166), Expect = 1.567e-11
Identity = 40/87 (45.98%), Postives = 52/87 (59.77%), Query Frame = 0 
Query:   22 WHALRTTFSLLPF--HGFWSQPRTERQARSKGYIKISDCNDINAFPGSRYIPNYDHPNIVFIYDVNGYIAGIQSIVDQVRGISNDLS 106
            W  L+ T+ L PF  + F + PRTE  A+ + ++KI DC+  N F G RY+ + D   IV IYD NGYIAGIQ+      GI NDL 
Sbjct:   32 WDGLKVTWGLNPFNKYNFDNLPRTESDAKHQKFVKIGDCSTTNKFLGRRYVKDNDLSAIV-IYDNNGYIAGIQA------GIPNDLK 111
[Close]
BLAST of EMLSAG00000000147 vs. nr
Match: gi|472403387|gb|AGI41318.1| (hypothetical protein [Cerebratulus lacteus])

HSP 1 Score: 67.781 bits (164), Expect = 2.385e-11
Identity = 38/92 (41.30%), Postives = 54/92 (58.70%), Query Frame = 0 
Query:    3 LLLIFVFLASLGAVYGSQNWHALRTTFSLLPFHG--FWSQPRTERQARSKGYIKISDCNDINAFPGSRYIPNYDHPNIVFIYDVNGYIAGIQ 92
            LLL FV  +    ++G  +W  L  T+   PF    F   PRTE  A+S G+ K+SDC++ + F G +Y+ N D   +V ++D NGYIAGIQ
Sbjct:    6 LLLTFVACSRAWDLFGGPSWDGLAVTWGPNPFSSVYFDQLPRTESAAQSDGWTKVSDCSENSFFRGKQYMKNNDAAAVV-LFDKNGYIAGIQ 96
[Close]
BLAST of EMLSAG00000000147 vs. nr
Match: gi|871213961|ref|XP_012934569.1| (PREDICTED: uncharacterized protein LOC101848024 [Aplysia californica])

HSP 1 Score: 66.2402 bits (160), Expect = 8.374e-11
Identity = 37/100 (37.00%), Postives = 59/100 (59.00%), Query Frame = 0 
Query:    3 LLLIFVFLASLGAV-------YGSQNWHALRTTFSLLPF--HGFWSQPRTERQARSKGYIKISDCNDINAFPGSRYIPNYDHPNIVFIYDVNGYIAGIQS 93
            +L     LA LGA        +  + W AL+ T++  PF  + F S PRTE  A+ +G+ KIS+C+    + G RY+   D+ ++V ++DVNG+IAG+Q+
Sbjct:    1 MLTWVALLALLGASQAFLLDSFRQEKWDALKVTWNANPFASNAFNSMPRTEADAQKQGFRKISECDTSAQWRGRRYVKGDDY-SVVLLFDVNGFIAGMQT 99
[Close]
BLAST of EMLSAG00000000147 vs. nr
Match: gi|871219897|ref|XP_005094269.2| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101854855 [Aplysia californica])

HSP 1 Score: 65.855 bits (159), Expect = 1.457e-10
Identity = 40/101 (39.60%), Postives = 61/101 (60.40%), Query Frame = 0 
Query:    1 MKLLLIFVFL-----ASLGAVYGSQNWHALRTTFSL-LPFHGFWSQPRTERQARSKGYIKISDCNDINAFPGSRYIPNYDHPNIVFIYDVNGYIAGIQSIV 95
            ++L+L+   L     A +  + G + W+ LR T+ L +P H F + PRT   A   G+ KIS CN   A+ G+RY+ + D+  +V +YDVNGYIAGIQ+ +
Sbjct:    2 LRLMLLVCMLSVSAHALIDTILGDK-WNNLRVTWGLNIPKH-FNAMPRTSSDAVEAGFKKISSCNRHAAWRGNRYVKDNDYA-VVLLYDVNGYIAGIQTSI 99
[Close]
BLAST of EMLSAG00000000147 vs. nr
Match: gi|871211157|ref|XP_005091074.2| (PREDICTED: uncharacterized protein LOC101846787 [Aplysia californica])

HSP 1 Score: 65.0846 bits (157), Expect = 2.154e-10
Identity = 39/95 (41.05%), Postives = 60/95 (63.16%), Query Frame = 0 
Query:    3 LLLIFVFLASLGAVYGSQN-WHALRTTFSL-LPFHGFWSQPRTERQARSKGYIKISDCNDINAFPGSRYIPNYDHPNIVFIYDVNGYIAGIQSIV 95
            +LL+ +F  S  A++ S N W+ LR T+ L +P H F + PRT   A  + + KIS C+    + G+RY+ + D+  +V +YDVNGYIAGIQ+ +
Sbjct:    5 VLLVCLFCVSAHALFISGNKWNNLRVTWGLNIPKH-FNAMPRTVSDAVKQNFKKISSCDKNAKWRGNRYVKDNDYA-VVLLYDVNGYIAGIQTSI 97
[Close]
BLAST of EMLSAG00000000147 vs. nr
Match: gi|908496327|ref|XP_013060572.1| (PREDICTED: uncharacterized protein LOC106050172 [Biomphalaria glabrata])

HSP 1 Score: 63.1586 bits (152), Expect = 7.648e-10
Identity = 40/89 (44.94%), Postives = 52/89 (58.43%), Query Frame = 0 
Query:    7 FVFLASLGAVYGSQNWHALRTTF--SLLPFHGFWSQPRTERQARSKGYIKISDCNDINAFPGSRYIPNYDHPNIVFIYDVNGYIAGIQS 93
             +F  S  AV     W  LRTT+  S+   + F SQPRT   A ++G+ K+S C   + + G RYI N DH  IV IYDV+G IAGIQ+
Sbjct:    4 LIFTCSADAVV----WDILRTTYGPSMTGVY-FQSQPRTRSDALAQGWTKLSGCEQGSKWRGERYIRNDDH-TIVLIYDVSGNIAGIQT 86
[Close]
BLAST of EMLSAG00000000147 vs. nr
Match: gi|919022695|ref|XP_013395237.1| (PREDICTED: uncharacterized protein LOC106162480 [Lingula anatina])

HSP 1 Score: 61.2326 bits (147), Expect = 5.980e-9
Identity = 39/101 (38.61%), Postives = 55/101 (54.46%), Query Frame = 0 
Query:    4 LLIFVFLASLGA--VYGSQNWHALRTTFSLLPF-HGFWSQPRTERQARSKGYIKISDCNDINAFPGSRYIPNYDHPNIVFIYDVNGYIAGIQSIVDQVRGI 101
            +L F  LAS  A    G   W  L+ TF + PF + F S PRT + A S G+   S C   + F G+RYI + D   ++ ++D NGYIAGIQ+ + +  G 
Sbjct:    7 VLAFGLLASGNAWLFGGGPQWDDLKVTFGINPFGNSFSSMPRTTKDAVSDGWKLDSKCGSNSQFMGNRYIKDGDTA-VMLLFDKNGYIAGIQAGIPKKAGT 106
[Close]
BLAST of EMLSAG00000000147 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold735_size104922-snap-gene-0.23 (protein:Tk08155 transcript:maker-scaffold735_size104922-snap-gene-0.23-mRNA-1 annotation:"protein gooseberry-like isoform x2")

HSP 1 Score: 74.3294 bits (181), Expect = 4.100e-17
Identity = 38/95 (40.00%), Postives = 59/95 (62.11%), Query Frame = 0 
Query:   21 NWHALRTTFSLLP-FHGFWSQPRTERQARSKGYIKISDCNDINA-FPGSRYIPNYDHPNIVFIYDVNGYIAGIQSIVDQVRGISND---LSSQPY 110
             W  LRTT++ +P   GF  QPRT+ +   +G++++S C D N  FPG R++ + D  +IV ++D NG+IAGIQ+IV   + + +     SS PY
Sbjct:  505 EWPHLRTTWAPVPGLGGFHPQPRTDAELAEEGWVQLSSCGDSNPNFPGDRFVTSADDNDIVLVFDGNGFIAGIQTIVPMDKAMDDKYFGFSSSPY 599
The following BLAST results are available for this feature:
BLAST of EMLSAG00000000147 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of EMLSAG00000000147 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 9
Match NameE-valueIdentityDescription
gi|592865464|gb|GAXK01092098.1|5.048e-1643.88TSA: Calanus finmarchicus comp77098_c1_seq2 transc... [more]
gi|592865465|gb|GAXK01092097.1|6.647e-1643.88TSA: Calanus finmarchicus comp77098_c1_seq1 transc... [more]
gi|592908602|gb|GAXK01049773.1|3.387e-1346.75TSA: Calanus finmarchicus comp31018_c2_seq1 transc... [more]
gi|592928774|gb|GAXK01029771.1|4.376e-1039.36TSA: Calanus finmarchicus comp932928_c0_seq1 trans... [more]
gi|592865463|gb|GAXK01092099.1|2.859e-450.00TSA: Calanus finmarchicus comp77098_c1_seq3 transc... [more]
gi|592764598|gb|GAXK01189970.1|7.860e-130.61TSA: Calanus finmarchicus comp263214_c1_seq2 trans... [more]
gi|592764594|gb|GAXK01189974.1|1.304e+030.61TSA: Calanus finmarchicus comp263214_c1_seq6 trans... [more]
gi|592764596|gb|GAXK01189972.1|1.364e+030.61TSA: Calanus finmarchicus comp263214_c1_seq4 trans... [more]
gi|592883730|gb|GAXK01074645.1|8.806e+034.38TSA: Calanus finmarchicus comp2284731_c0_seq1 tran... [more]
back to top
BLAST of EMLSAG00000000147 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 3
Match NameE-valueIdentityDescription
EMLSAP000000001472.679e-78100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1022:4572... [more]
EMLSAP000000096567.891e-5177.32pep:novel supercontig:LSalAtl2s:LSalAtl2s620:10836... [more]
EMLSAP000000013813.154e-940.30pep:novel supercontig:LSalAtl2s:LSalAtl2s1231:6355... [more]
back to top
BLAST of EMLSAG00000000147 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of EMLSAG00000000147 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of EMLSAG00000000147 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 11
Match NameE-valueIdentityDescription
gi|908444415|ref|XP_013080143.1|8.969e-1544.94PREDICTED: uncharacterized protein LOC106065788 [B... [more]
gi|871210918|ref|XP_012944492.1|5.524e-1240.00PREDICTED: uncharacterized protein LOC101862243 [A... [more]
gi|762098513|ref|XP_011431649.1|6.222e-1243.16PREDICTED: uncharacterized protein LOC105331236 [C... [more]
gi|1040778374|gb|JAS04240.1|1.567e-1145.98hypothetical protein [Pinctada fucata] >gi|1040778... [more]
gi|472403387|gb|AGI41318.1|2.385e-1141.30hypothetical protein [Cerebratulus lacteus][more]
gi|871213961|ref|XP_012934569.1|8.374e-1137.00PREDICTED: uncharacterized protein LOC101848024 [A... [more]
gi|871219897|ref|XP_005094269.2|1.457e-1039.60PREDICTED: LOW QUALITY PROTEIN: uncharacterized pr... [more]
gi|871211157|ref|XP_005091074.2|2.154e-1041.05PREDICTED: uncharacterized protein LOC101846787 [A... [more]
gi|908496327|ref|XP_013060572.1|7.648e-1044.94PREDICTED: uncharacterized protein LOC106050172 [B... [more]
gi|919022695|ref|XP_013395237.1|5.980e-938.61PREDICTED: uncharacterized protein LOC106162480 [L... [more]

Pages

back to top
BLAST of EMLSAG00000000147 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 1
Match NameE-valueIdentityDescription
maker-scaffold735_size104922-snap-gene-0.234.100e-1740.00protein:Tk08155 transcript:maker-scaffold735_size1... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1022supercontigLSalAtl2s1022:45727..49241 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionsnap_masked-LSalAtl2s1022-processed-gene-0.19
Biotypeprotein_coding
EvidenceIEA
NotePREDICTED: uncharacterized protein LOC106065788 [Biomphalaria glabrata]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000000147 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000000147EMLSAT00000000147-695994Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1022:45727..49241+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000000147-682913 ID=EMLSAG00000000147-682913|Name=EMLSAG00000000147|organism=Lepeophtheirus salmonis|type=gene|length=3515bp|location=Sequence derived from alignment at LSalAtl2s1022:45727..49241+ (Lepeophtheirus salmonis)
TAAAAGTGCAGAATAATGAAACTCCTGCTTATATTCGTCTTTTTAGCCTC
CCTGGTAAGAAATAAATATTCAATACTTTTTATATTGTCTCATTAAATAA
ATGATATATAATTTCAGGGTGCAGTTTATGGCTCTCAAAACTGGCACGCC
CTAAGGACAACCTTTAGTCTTCTTCCCTTCCATGGATTCTGGAGTCAACC
TAGGACAGAGCGTCAAGCCAGATCCAAAGGATATATCAAGATCAGCGACT
GCAATGATATCAATGCGTATGTAACATACCTCTGAACATTAGTAGTTACA
TTATGGATTTAATCATTATTTTAGGTTCCCTGGGAGTCGTTACATTCCAA
ACTATGATCACCCCAACATTGTTTTCATTTATGATGTAAATGGATATATT
GCTGGAATTCAAAGTATTGTGGATCAGGTAAGAGGAATATCAAATGATTT
ATCATCACAGCCCTACTAATATGTATGTCGTCCTGATTTAACCAATAAAA
AAACTCAGGATCAGGGAAAAATCCCAACTTATTTTTTTAAAATCATGTAG
ATGTTACGAGGAGGCTGGAAAATCGGCCATTTTGCAAAATGCCCGGGCAA
TCTGTACAATTTCCAATAGAGTGGTCAATGTTTATTTTAAATTCCTTTAC
AATGTCATTTAAAATGATTCTGAGTAATATTATTACTAAACAATTCATTG
TAAGCAATTTGATCATTATGGATTTAATTAACATACAATTTCATTGAACT
TAAAGTAGAATTTCTAATTAAAATTGTTGCAAAATCCAAGCGCATAGAGC
GCTCATAATACGCACAAAGATTGAAATATATTTGAGAGTACCTCAATTTT
TCTCGGACTCTCAAAAGGATGGCAGTTTTGCTTTATTAAGCAGTTTGTCC
TTGAAAAATTATATTTATATTTAGTCATAAATTGGAATAAATTTGTATTT
AATGGTTTTCTTTTATATAGACATTTTCCTATTATTTTTTCTTAATAGAT
TATGTGGCCCATTCAAATATTTCAAGTTGCAATGCGGCCTATTATATTAA
AAGGCTTGCCATCCCTGATCTAGTATCTTTTTATTATATTCAGGCTATAA
AACTCGGCCTCAGGCAAAAGGTTTTGCAGGTGGACCAAAACCTATCGCTA
ACATTATCTTGAGTATTAACGACCCCTTCGAAAATATATTATAATTCGCC
CCAGCCCACAGATTATGCTAGTTAACCGCTTCTCCAGAAGGGGGATCAAA
ATCTATCCCCACCACTTTCCTGAGTATCAAGGACCCTTTCTAATATCCTA
GTGCAAGTGGACCTCTGGTCCAAAAGGTGTAGCATTACCCACCACCACCG
CTGCCTTGATCACCAAGGACACCTTTCAATATCCTATAACTTACCCAGCC
CATAGGCTGTGCAAGTGAACCACRGGTCCCTGGAGCTTACTTGATACCCT
TAAATATTTTTCAATGTTTGTACGGATCATGAGCAGTTTACGCGTTTTTA
TGATAAGGTGACAATTTCAAATTACTCGCAATCCTTTTATCTGACAATGT
AAATGAAGTTGAAATGGTCATAGATCACCCTCTACTAGAGATGTTATAGA
TTCCCCGGGCATTTTGCACATTTCCCACTCTAACGTGCATTTGTACATTG
ACCAACTTTCCACATGGTCCGTAACATATGCATACCATAGACGTACTTGA
GTCACTAGTAGTCTCCGCATTCAGATTTTTCGTGATACCTATAAACATTA
GCTGGGTCATTCCACATCAAGTGTACAACCCCTCACGGCATGAACATCAC
CGATGTTCATGATTTTTGGTGAGCTGGCTTTTCTATATGACAGTGTGTGA
AATATTAGGGTTCTGTGKCTCACCTGGGTAGTTCTAGGCCCGCCACAAGT
TGGTCCTGATGCGTAAGACCTGTGTTGTTTAGAAGGCCATAATTCCGCTC
ATAGTGGCTCGATTTTAACACAAATTACGTTGAAAGATGCACGAGAACAC
AAACTTTAACTTATATTCGATCGTAATCTTATTTTAATCAAAAATAAAAG
TTTGGGGTTCTGGTGCGCCTTCAAAATGGCGCCCTGCCATGCAGCAACCC
CGATTTTGTTTTAATTTTCGTAGAATACGTATCAGTATATGTTTCGTAAC
ATATTCAAAATTCAGAGTGGGATCTTAATGGGATCTCTTCCAACAAGAGC
ATTATTTAGAGTATATAGAACCGCTTTCATAGCATATCGGTATGATTTTT
TTATATTTAAACTCGGTATTTACGGCCCTCATTTTATTTATGCAACTGTA
TTTGGCCCCAATAAGGCCTTTCAACTATATAGTTTATCACTTCTTAATTC
TGAGTCATTGTGACGATGCATTTTAACTACTTTAATTTGCAATTTGTGCA
GTCTCTAAAAAATTAATCAGAATAATTAGTTGTTGATAGAAACGGACGAC
TACAATTAGTTGCAGAATACAAATGGTGAATTCAGACTCCATCTTGAAAA
AAAGTCATTTTAGTTTGCTTTTGTATTGAAAAGACCACATATATACAATT
TTTTAAATATATTTATATAAAATTTATGACGTAGGCTGCCTGGGACAATG
GCTAKGTAAACTTCCACAACAAATCAATGTATCAGCCAAGTACTATTAAT
GGAAAAGATGTTTTCCTAACCACGGCTTATTTCGTGGACCCACAAATTAT
TTGCTCAACTGGAAGAACTCCTTCTCAATACAAAACCCAAGGAACAGGAT
ATACACTTATTTTCCAAAATGGAGAAGATATTTCCCAAAAGAACTTGATG
GAAATACCTCTAATAGAAGAAAATTTGAAGGACTCTGTAAGTGTGCCACT
ATAATTAGAGTAGTAAATAATTTTAGGCACTATTAGAATGTTTTAAAAAA
TAACAACATAATATAAATAGACGCAATATCTAAACAGCTTTAGGGGGAGA
AAAAAAACTCAGACGCTAGAAAATGCTTATAATTTACAATTTTCACTATA
ATGTCCAAACTATTGTTATACTTGTATTATTTAGGATTTTTGGAACGAAC
ATCTTTGTTTCATCAACATGGGCCAGCATTATTTTAATCTTCATTAAGAT
CCCGAGGAGTCCTGTGAAAATCTTTTCCCTGTTCAACTCATTTATAAAGA
AGGACTTCTCCATGGATTTGTTTGGCAACACTTTGGAACTCTTCCAGGAG
ATTTGTAAGTAGTTGATATATTTGGGTGTTTCTGTTGGTGCTAACATGAT
TTCTATTTAATTTCAACTCTAGCMGGGASCARCCRCCAGCWCTAGCCATT
AGCAAAATCATTAAGGATCCTCCAACCTATATTTTGGATGCCATTGGTAC
TGTTGGACTCAGCACCATGCACATTTACTTTAAAAACTACCTGTCTATTT
GTAATTAATTTTACATTACATAATTGTAACAGACTGACATTTTAAATAAA
TCAATGATTTTTTTTTAATCATCGTTTCTATTTATAATGCATATATCTAT
TTGATGTCATATTTT
back to top
Add to Basket