EMLSAG00000000259, EMLSAG00000000259-683025 (gene) Lepeophtheirus salmonis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000259 vs. GO
Match: - (symbol:GTF2H3 "cDNA FLJ53013, highly similar to TFIIH basal transcription factor complex p34 subunit" species:9606 "Homo sapiens" [GO:0000439 "core TFIIH complex" evidence=IEA] [GO:0006289 "nucleotide-excision repair" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] InterPro:IPR004600 Pfam:PF03850 GO:GO:0006355 GO:GO:0006289 EMBL:AC117503 GO:GO:0000439 CTD:2967 HOVERGEN:HBG054271 KO:K03143 PANTHER:PTHR12831 TIGRFAMs:TIGR00627 RefSeq:NP_001258796.1 UniGene:Hs.355348 GeneID:2967 KEGG:hsa:2967 HGNC:HGNC:4657 GenomeRNAi:2967 EMBL:AK298128 PRIDE:B4DNZ6 Ensembl:ENST00000228955 NextBio:35473744 ArrayExpress:B4DNZ6 Uniprot:B4DNZ6) HSP 1 Score: 132.109 bits (331), Expect = 1.534e-35 Identity = 79/229 (34.50%), Postives = 107/229 (46.72%), Query Frame = 0
Query: 46 LCFANAHLMLHPSNALATLGSMASGSYFLYP-----------PPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRKE---NMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
+ N+HL ++ SN LA + S S FLYP P +P N DG+YEL T + + +L+ T++ L+GSLA AL YI+R KE N ++ +RIL Q DITGG+Y VP +LLQ+LLW+FLP + R QL LP VD+RAACFCHR L++IG+VCS+
Sbjct: 1 MVLGNSHLFMNRSNKLAVIASHIQESRFLYPGKNGRLGDFFGDPGNPPEFNPSGSKDGKYELLTSANEVIVEEIKDLMTKSDIKGQHTETLLAGSLAKALCYIHRMNKEVKDNQEMKSRILVIKAAEDSALQYMNFMNVIFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQRSQLILPPPVHVDYRAACFCHRNLIEIGYVCSV 229
BLAST of EMLSAG00000000259 vs. GO
Match: - (symbol:GTF2H3 "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0000439 "core TFIIH complex" evidence=IEA] [GO:0006289 "nucleotide-excision repair" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0006366 "transcription from RNA polymerase II promoter" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity" evidence=IEA] [GO:0008353 "RNA polymerase II carboxy-terminal domain kinase activity" evidence=IEA] [GO:0047485 "protein N-terminus binding" evidence=IEA] InterPro:IPR004600 Pfam:PF03850 GO:GO:0006355 GO:GO:0006289 GO:GO:0000439 PANTHER:PTHR12831 TIGRFAMs:TIGR00627 TreeFam:TF314336 GeneTree:ENSGT00390000013143 OrthoDB:EOG7MKW6M EMBL:AADN03007126 Ensembl:ENSGALT00000039540 Uniprot:F1NGC7) HSP 1 Score: 127.487 bits (319), Expect = 1.389e-33 Identity = 79/236 (33.47%), Postives = 109/236 (46.19%), Query Frame = 0
Query: 38 LTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAAD-----------NEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYI--NRRRKENMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
L+ +D + N+HL + +N LA + S S FLYP +AD N DG+YEL T + + + +L+ + QT++ L+GSLA AL I K N ++ +RIL Q DITGG+Y VP +LLQ+LLW+FLP E R QL LP VD+RAACFCHR L++IG+VCS+
Sbjct: 12 LSKCMDAAMVLGNSHLFMSRTNRLALIASHTQESRFLYPGKRWASADLLGDGGNSVESNCSGSKDGKYELLTAINDAIAEEIKDLMTKTDMMGQQTETLLAGSLAKALCCILLMEVLKANQEMKSRILVIKAAEDSALQYMNFMNVIFAAQKQSILIDACVLDSDSGLLQQACDITGGIYLKVPHLPSLLQYLLWVFLPDQEQRSQLVLPPPVHVDYRAACFCHRNLIEIGYVCSV 247
BLAST of EMLSAG00000000259 vs. GO
Match: - (symbol:GTF2H3 "General transcription factor IIH subunit 3" species:9606 "Homo sapiens" [GO:0000439 "core TFIIH complex" evidence=IEA] [GO:0006289 "nucleotide-excision repair" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] InterPro:IPR004600 Pfam:PF03850 GO:GO:0006355 GO:GO:0006289 EMBL:AC117503 GO:GO:0000439 PANTHER:PTHR12831 HGNC:HGNC:4657 ProteinModelPortal:H0YFF7 Ensembl:ENST00000543154 NextBio:35522714 ArrayExpress:H0YFF7 Bgee:H0YFF7 Uniprot:H0YFF7) HSP 1 Score: 122.094 bits (305), Expect = 2.166e-32 Identity = 63/155 (40.65%), Postives = 85/155 (54.84%), Query Frame = 0
Query: 91 DGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRKE---NMDLSARIL------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
DG+YEL T + + +L+ T++ L+GSLA AL YI+R KE N ++ +RIL Q DITGG+Y VP +LLQ+LLW+FLP + R QL LP VD+RAACFCHR L++IG+VCS+
Sbjct: 2 DGKYELLTSANEVIVEEIKDLMTKSDIKGQHTETLLAGSLAKALCYIHRMNKEVKDNQEMKSRILVIKAAEDSALQYMNFMNVIFAAQKQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQRSQLILPPPVHVDYRAACFCHRNLIEIGYVCSV 156
BLAST of EMLSAG00000000259 vs. GO
Match: - (symbol:tfb4 "transcription factor TFIIH complex subunit Tfb4" species:4896 "Schizosaccharomyces pombe" [GO:0005675 "holo TFIIH complex" evidence=ISO] [GO:0000991 "core RNA polymerase II binding transcription factor activity" evidence=ISO] [GO:0006367 "transcription initiation from RNA polymerase II promoter" evidence=ISO] [GO:0006289 "nucleotide-excision repair" evidence=ISO] [GO:0000439 "core TFIIH complex" evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:2001141 "regulation of RNA biosynthetic process" evidence=ISO] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR004600 Pfam:PF03850 PomBase:SPBC30B4.07c GO:GO:0005829 GO:GO:0006355 GO:GO:0046872 EMBL:CU329671 GO:GO:0006367 GO:GO:0000991 GO:GO:0006289 GO:GO:0005675 EMBL:AB004539 GO:GO:0000439 eggNOG:COG5242 HOGENOM:HOG000175900 KO:K03143 PANTHER:PTHR12831 TIGRFAMs:TIGR00627 OMA:MVMGNSH OrthoDB:EOG7GXPNJ PIR:T40173 RefSeq:NP_595532.1 BioGrid:276872 IntAct:O74366 MINT:MINT-4678512 STRING:4896.SPBC30B4.07c-1 EnsemblFungi:SPBC30B4.07c.1 GeneID:2540343 KEGG:spo:SPBC30B4.07c NextBio:20801471 PRO:PR:O74366 Uniprot:O74366) HSP 1 Score: 122.479 bits (306), Expect = 1.205e-31 Identity = 77/246 (31.30%), Postives = 115/246 (46.75%), Query Frame = 0
Query: 17 LLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYP--PPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRKENMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
LL++++D NP L ++ VL ++ F NAHL H N +A L S + +LYP P+ A+ + + Y F V+ V S L+ S +S +T +SG+L+ AL+YIN+ + +N L +RIL Q AD TGG+Y V + LLQ+L+ P +R L P+ VDFRA CFCH++++DIGFVCS+
Sbjct: 25 LLVVILDANPASWYSLSKKVPVSKVLADITVFLNAHLAFHHDNRVAVLASHSDKVEYLYPSIAPEQKVAEVDPTKEANTYRKFREVDDLVLSGMKRLMSSTDKVSRKT--MISGALSRALAYINQVQNKNT-LRSRILIFSLTGDVALQYIPTMNCIFCAQKKNIPINVCNIEGGTLFLEQAADATGGIYLKVDNPKGLLQYLMMSLFPDQNLRKHLNTPNQANVDFRATCFCHKKVLDIGFVCSV 267
BLAST of EMLSAG00000000259 vs. GO
Match: - (symbol:TFB4 "RNA polymerase II transcription factor B subunit 4" species:284593 "Candida glabrata CBS 138" [GO:0003674 "molecular_function" evidence=ND] InterPro:IPR004600 Pfam:PF03850 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351 EMBL:CR380950 GO:GO:0006289 GO:GO:0000439 HOGENOM:HOG000175900 KO:K03143 PANTHER:PTHR12831 OMA:MVMGNSH RefSeq:XP_445487.1 GeneID:2887225 KEGG:cgr:CAGL0D01650g OrthoDB:EOG7GXPNJ Uniprot:Q6FWA7) HSP 1 Score: 85.1149 bits (209), Expect = 2.746e-18 Identity = 66/264 (25.00%), Postives = 113/264 (42.80%), Query Frame = 0
Query: 17 LLIIVMDMNPN-QKLFLH---XPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLD------GQYELFTLVETTVRSKFIELLQSEAGISSQ--TDSPLSGSLAMALSYINRRRK--ENMDLSARIL------------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
LL +V+D++P F H ++T+VL +L+ F N+HL + +N +A + + + G +LYP D + N D Y F V+ T+ +F +L Q E + + S LSG++A AL+Y NR K E++ L +R+L Q D T G+Y ++ ++Q+L +R + P+ VDFR +C+ ++V IG++CS+
Sbjct: 25 LLTVVLDISPRLWAEFDHRSGEKQSVTTVLKSLIVFLNSHLAFNSANQVAVIAAFSQGIQYLYPRSSDTSEQNAGNSKDLSIISSHMYRRFRNVDETLIEEFYKLYQREESLIDKPVQKSTLSGAMAAALTYTNRLTKEFESISLRSRLLVITCGSSREKDEIFQYIPIMNCIFSATKLKCPIDVIKIGGNKQSTFLQQTTDATNGVYIHLESTNGIIQYLSTAMSIDPSLRQIIVRPTQGSVDFRTSCYLTGKVVAIGYICSV 288
BLAST of EMLSAG00000000259 vs. GO
Match: - (symbol:CAGL0D01650g species:5478 "Candida glabrata" [GO:0005675 "holo TFIIH complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000439 "core TFIIH complex" evidence=IEA] [GO:0000112 "nucleotide-excision repair factor 3 complex" evidence=IEA] [GO:0003674 "molecular_function" evidence=ND] [GO:0070816 "phosphorylation of RNA polymerase II C-terminal domain" evidence=IEA] [GO:0006366 "transcription from RNA polymerase II promoter" evidence=IEA] [GO:0006289 "nucleotide-excision repair" evidence=IEA] InterPro:IPR004600 Pfam:PF03850 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351 EMBL:CR380950 GO:GO:0006289 GO:GO:0000439 HOGENOM:HOG000175900 KO:K03143 PANTHER:PTHR12831 OMA:MVMGNSH RefSeq:XP_445487.1 GeneID:2887225 KEGG:cgr:CAGL0D01650g OrthoDB:EOG7GXPNJ Uniprot:Q6FWA7) HSP 1 Score: 85.1149 bits (209), Expect = 2.746e-18 Identity = 66/264 (25.00%), Postives = 113/264 (42.80%), Query Frame = 0
Query: 17 LLIIVMDMNPN-QKLFLH---XPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLD------GQYELFTLVETTVRSKFIELLQSEAGISSQ--TDSPLSGSLAMALSYINRRRK--ENMDLSARIL------------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
LL +V+D++P F H ++T+VL +L+ F N+HL + +N +A + + + G +LYP D + N D Y F V+ T+ +F +L Q E + + S LSG++A AL+Y NR K E++ L +R+L Q D T G+Y ++ ++Q+L +R + P+ VDFR +C+ ++V IG++CS+
Sbjct: 25 LLTVVLDISPRLWAEFDHRSGEKQSVTTVLKSLIVFLNSHLAFNSANQVAVIAAFSQGIQYLYPRSSDTSEQNAGNSKDLSIISSHMYRRFRNVDETLIEEFYKLYQREESLIDKPVQKSTLSGAMAAALTYTNRLTKEFESISLRSRLLVITCGSSREKDEIFQYIPIMNCIFSATKLKCPIDVIKIGGNKQSTFLQQTTDATNGVYIHLESTNGIIQYLSTAMSIDPSLRQIIVRPTQGSVDFRTSCYLTGKVVAIGYICSV 288
BLAST of EMLSAG00000000259 vs. GO
Match: - (symbol:AO090026000670 "RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH" species:510516 "Aspergillus oryzae RIB40" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150 "biological_process" evidence=ND] InterPro:IPR004600 Pfam:PF03850 GO:GO:0006355 EMBL:AP007159 GO:GO:0006289 GO:GO:0000439 HOGENOM:HOG000175900 KO:K03143 PANTHER:PTHR12831 OMA:MVMGNSH OrthoDB:EOG7GXPNJ RefSeq:XP_001822088.1 STRING:5062.CADAORAP00008504 EnsemblFungi:CADAORAT00008679 GeneID:5994116 KEGG:aor:AOR_1_1202014 Uniprot:Q2UEC9) HSP 1 Score: 81.6481 bits (200), Expect = 8.757e-17 Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = 0
Query: 153 QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
Q +D T G+Y ++ + LLQ+L+ FLP R L LP+ VDFRAACFCHR++VDIGFVCSI
Sbjct: 251 QASDATKGIYMSLTEPRGLLQYLMMAFLPDQRSRRHLVLPTRVDVDFRAACFCHRRVVDIGFVCSI 316 HSP 2 Score: 65.0846 bits (157), Expect = 4.061e-11 Identity = 46/154 (29.87%), Postives = 74/154 (48.05%), Query Frame = 0
Query: 9 SGGDSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPA-----------------ADNEIRQLDGQ---YELFTLVETTVRSKFIELLQSEAG--ISSQTDSPLSGSLAMALSYINRR 140
S D LL +V+D NP+ L L+ + N+L F NAHL + +N +A + S + + +LY P ++PA +N + GQ Y F +VE V EL+ S +G + + + ++G+L +ALS+INRR
Sbjct: 13 SARDPAPALLTVVLDTNPHAWALLEDSLPLSKAIANILVFLNAHLACNYANEVAVVASHSQKAAWLY-PHENPATKISHDADGDVSMNGSSTNNNTTEGPGQVNKYRPFRIVEEQVTHNLRELMASTSGPDVKANNSTMMAGALTLALSHINRR 165
BLAST of EMLSAG00000000259 vs. GO
Match: - (symbol:AO090026000670 species:5062 "Aspergillus oryzae" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] InterPro:IPR004600 Pfam:PF03850 GO:GO:0006355 EMBL:AP007159 GO:GO:0006289 GO:GO:0000439 HOGENOM:HOG000175900 KO:K03143 PANTHER:PTHR12831 OMA:MVMGNSH OrthoDB:EOG7GXPNJ RefSeq:XP_001822088.1 STRING:5062.CADAORAP00008504 EnsemblFungi:CADAORAT00008679 GeneID:5994116 KEGG:aor:AOR_1_1202014 Uniprot:Q2UEC9) HSP 1 Score: 81.6481 bits (200), Expect = 8.757e-17 Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = 0
Query: 153 QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
Q +D T G+Y ++ + LLQ+L+ FLP R L LP+ VDFRAACFCHR++VDIGFVCSI
Sbjct: 251 QASDATKGIYMSLTEPRGLLQYLMMAFLPDQRSRRHLVLPTRVDVDFRAACFCHRRVVDIGFVCSI 316 HSP 2 Score: 65.0846 bits (157), Expect = 4.061e-11 Identity = 46/154 (29.87%), Postives = 74/154 (48.05%), Query Frame = 0
Query: 9 SGGDSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPA-----------------ADNEIRQLDGQ---YELFTLVETTVRSKFIELLQSEAG--ISSQTDSPLSGSLAMALSYINRR 140
S D LL +V+D NP+ L L+ + N+L F NAHL + +N +A + S + + +LY P ++PA +N + GQ Y F +VE V EL+ S +G + + + ++G+L +ALS+INRR
Sbjct: 13 SARDPAPALLTVVLDTNPHAWALLEDSLPLSKAIANILVFLNAHLACNYANEVAVVASHSQKAAWLY-PHENPATKISHDADGDVSMNGSSTNNNTTEGPGQVNKYRPFRIVEEQVTHNLRELMASTSGPDVKANNSTMMAGALTLALSHINRR 165
BLAST of EMLSAG00000000259 vs. GO
Match: - (symbol:AN0138.2 "Putative uncharacterized protein" species:227321 "Aspergillus nidulans FGSC A4" [GO:0003674 "molecular_function" evidence=ND] InterPro:IPR004600 Pfam:PF03850 GO:GO:0006355 EMBL:AACD01000004 GO:GO:0006289 GO:GO:0000439 eggNOG:COG5242 KO:K03143 PANTHER:PTHR12831 RefSeq:XP_657742.1 STRING:162425.CADANIAP00002608 GeneID:2875918 KEGG:ani:AN0138.2 Uniprot:Q5BH42) HSP 1 Score: 81.2629 bits (199), Expect = 1.000e-16 Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = 0
Query: 153 QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
Q +D T G+Y ++ + LLQ+L+ FLP R L LP+ VDFRAACFCHR++VDIGFVCSI
Sbjct: 260 QASDATKGIYMSLSEPRGLLQYLMMAFLPDQRSRKHLILPTRVDVDFRAACFCHRRVVDIGFVCSI 325 HSP 2 Score: 54.299 bits (129), Expect = 1.997e-7 Identity = 40/147 (27.21%), Postives = 66/147 (44.90%), Query Frame = 0
Query: 20 IVMDMNPNQKLFLHXPTA----LTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAA------------DNEIRQLDG--------QYELFTLVETTVRSKFIELLQS--EAGISSQTDSPLSGSLAMALSYINRR 140
+++D NP+ L ++ L N+L F NAHL + +N +A + S + +LYP P+ P +N + G +Y F +VE V S L+ S + S + ++G+L +ALS+INRR
Sbjct: 16 VIIDTNPHAWALLEQNEKNQLPFSTALANILVFLNAHLACNYANEVAVVASHTHKAAWLYPSPNSPTTSADSDGDVTMSNNNHMSTGGGSGKPSQVNKYRPFRIVEEQVTSNLRHLVDSTNRDDLDSGASTMMAGALTLALSHINRR 162
BLAST of EMLSAG00000000259 vs. GO
Match: - (symbol:ANIA_00138 "Transcription factor TFIIH complex subunit (Eurofung)" species:227321 "Aspergillus nidulans FGSC A4" [GO:0003674 "molecular_function" evidence=ND] InterPro:IPR004600 Pfam:PF03850 GO:GO:0006355 EMBL:BN001308 GO:GO:0006289 GO:GO:0000439 HOGENOM:HOG000175900 PANTHER:PTHR12831 OMA:MVMGNSH OrthoDB:EOG7GXPNJ EnsemblFungi:CADANIAT00002608 Uniprot:C8VQI5) HSP 1 Score: 81.2629 bits (199), Expect = 1.159e-16 Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = 0
Query: 153 QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
Q +D T G+Y ++ + LLQ+L+ FLP R L LP+ VDFRAACFCHR++VDIGFVCSI
Sbjct: 268 QASDATKGIYMSLSEPRGLLQYLMMAFLPDQRSRKHLILPTRVDVDFRAACFCHRRVVDIGFVCSI 333 HSP 2 Score: 58.151 bits (139), Expect = 8.555e-9 Identity = 44/158 (27.85%), Postives = 70/158 (44.30%), Query Frame = 0
Query: 9 SGGDSKAQLLIIVMDMNPNQKLFLHXPTA----LTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAA------------DNEIRQLDG--------QYELFTLVETTVRSKFIELLQS--EAGISSQTDSPLSGSLAMALSYINRR 140
S D LL +++D NP+ L ++ L N+L F NAHL + +N +A + S + +LYP P+ P +N + G +Y F +VE V S L+ S + S + ++G+L +ALS+INRR
Sbjct: 13 SAHDPAPSLLTVIIDTNPHAWALLEQNEKNQLPFSTALANILVFLNAHLACNYANEVAVVASHTHKAAWLYPSPNSPTTSADSDGDVTMSNNNHMSTGGGSGKPSQVNKYRPFRIVEEQVTSNLRHLVDSTNRDDLDSGASTMMAGALTLALSHINRR 170
BLAST of EMLSAG00000000259 vs. C. finmarchicus
Match: gi|592796352|gb|GAXK01158216.1| (TSA: Calanus finmarchicus comp66659_c2_seq1 transcribed RNA sequence) HSP 1 Score: 172.94 bits (437), Expect = 5.961e-51 Identity = 95/250 (38.00%), Postives = 140/250 (56.00%), Query Frame = 0
Query: 16 QLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNE-IRQLDGQYELFTLVETTVRSKF-IELLQSEAGISSQTDSPLSGSLAMALSYINRR---RKENMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
QLL++VMD+NP+Q LF P + + +L++++ N HLML+P+N +A + + A+ +LYP DP+ + +RQ DGQYE F VET ++ + + L + G + ++S LSG+LAMAL+YIN++ R + S R++ QG+DITGG+Y V LLQ+L W+FLP +R LG P +VD+RAACFCHRQLVD+GFVCS+
Sbjct: 60 QLLVVVMDINPHQLLFARQPGSFSQLLNSVMSLLNQHLMLNPTNQVALVAAHATDCSYLYP---DPSGGGQLLRQQDGQYEEFYQVETVIKERVGLVLAKDREGGQASSESLLSGALAMALAYINKQQASRVASEKFSPRLMVMSATGDSAAQYMNYMNVFFTAQKLNIPLDTCMILQDSGLLQQGSDITGGLYVKVEQLTGLLQYLTWLFLPGPSLRKMLGAPPPVRVDYRAACFCHRQLVDVGFVCSV 800
BLAST of EMLSAG00000000259 vs. C. finmarchicus
Match: gi|592935676|gb|GAXK01022877.1| (TSA: Calanus finmarchicus comp946102_c0_seq1 transcribed RNA sequence) HSP 1 Score: 30.4166 bits (67), Expect = 5.689e+0 Identity = 19/67 (28.36%), Postives = 36/67 (53.73%), Query Frame = 0
Query: 105 RSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRKENMDLSARILQGADITGGMYFNVPDNAAL 171
R + + + + ISS + L G+ MA+ + R+ ++ +DL++R+ D GG+ VPD +L
Sbjct: 980 RQQRVVICCTSCRISSDLHNDLEGNGVMAM--VLRKVEDQVDLTSRMSVWLDNPGGVPLLVPDEVSL 1174
BLAST of EMLSAG00000000259 vs. L. salmonis peptides
Match: EMLSAP00000000259 (pep:novel supercontig:LSalAtl2s:LSalAtl2s103:1015218:1016337:1 gene:EMLSAG00000000259 transcript:EMLSAT00000000259 description:"snap_masked-LSalAtl2s103-processed-gene-10.11") HSP 1 Score: 448.743 bits (1153), Expect = 1.280e-161 Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0
Query: 1 MSPSESTGSGGDSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRKENMDLSARILQGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSIK 219
MSPSESTGSGGDSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRKENMDLSARILQGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSIK
Sbjct: 1 MSPSESTGSGGDSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRKENMDLSARILQGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSIK 219
BLAST of EMLSAG00000000259 vs. SwissProt
Match: gi|50403772|sp|Q13889.2|TF2H3_HUMAN (RecName: Full=General transcription factor IIH subunit 3; AltName: Full=Basic transcription factor 2 34 kDa subunit; Short=BTF2 p34; AltName: Full=General transcription factor IIH polypeptide 3; AltName: Full=TFIIH basal transcription factor complex p34 subunit) HSP 1 Score: 144.05 bits (362), Expect = 7.126e-41 Identity = 88/266 (33.08%), Postives = 125/266 (46.99%), Query Frame = 0
Query: 12 DSKAQLLIIVMDMNP---NQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYP-----------PPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRKE---NMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
+ + LL+IV+D NP ++ L+ +D ++ N+HL ++ SN LA + S S FLYP P +P N DG+YEL T + + +L+ T++ L+GSLA AL YI+R KE N ++ +RIL Q DITGG+Y VP +LLQ+LLW+FLP + R QL LP VD+RAACFCHR L++IG+VCS+
Sbjct: 5 EDELNLLVIVVDANPIWWGKQALKESQFTLSKCIDAVMVLGNSHLFMNRSNKLAVIASHIQESRFLYPGKNGRLGDFFGDPGNPPEFNPSGSKDGKYELLTSANEVIVEEIKDLMTKSDIKGQHTETLLAGSLAKALCYIHRMNKEVKDNQEMKSRILVIKAAEDSALQYMNFMNVIFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQRSQLILPPPVHVDYRAACFCHRNLIEIGYVCSV 270
BLAST of EMLSAG00000000259 vs. SwissProt
Match: gi|81888006|sp|Q561R7.1|TF2H3_RAT (RecName: Full=General transcription factor IIH subunit 3; AltName: Full=General transcription factor IIH polypeptide 3) HSP 1 Score: 142.124 bits (357), Expect = 5.150e-40 Identity = 87/270 (32.22%), Postives = 126/270 (46.67%), Query Frame = 0
Query: 9 SGGDSKAQLLIIVMDMNP---NQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAAD------------NEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRK---ENMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
+ + + LL+I++D NP ++ L+ +D ++ ANAHL ++ SN LA + S S FLYP + D N DG+YEL T + + +L+ T++ L+GSLA AL YI+R K +N ++ +RIL Q DITGG+Y VP +LLQ+LLW+FLP + R QL LP VD+RAACFCHR L++IG+VCS+
Sbjct: 2 AADEDELNLLVIIVDTNPIWWGKQALKESQFTLSKCMDAVMVLANAHLFMNRSNQLAVIASHIQESRFLYPGKNGRLGDFFGDPGNALPDCNPSGSKDGKYELLTAANEVIAEEIKDLMTKSDIKGQHTETLLAGSLAKALCYIHRASKAVKDNQEMKSRILVIKAAEDSALQYMNFMNVIFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQRSQLILPPPIHVDYRAACFCHRSLIEIGYVCSV 271
BLAST of EMLSAG00000000259 vs. SwissProt
Match: gi|122131719|sp|Q05B56.1|TF2H3_BOVIN (RecName: Full=General transcription factor IIH subunit 3; AltName: Full=General transcription factor IIH polypeptide 3) HSP 1 Score: 140.969 bits (354), Expect = 1.111e-39 Identity = 86/267 (32.21%), Postives = 127/267 (47.57%), Query Frame = 0
Query: 12 DSKAQLLIIVMDMNP---NQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYP-----------PPDDPAAD-NEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRKE---NMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
+ + LL+I++D NP ++ L+ +D ++ N+HL ++ SN LA + S S FLYP P +P+++ DG+YEL T + + +L+ T++ L+GSLA AL YI+R KE N ++ +RIL Q DITGG+Y VP +LLQ+LLW+FLP + R QL LP VD+RAACFCHR L++IG+VCS+
Sbjct: 5 EDELNLLVIIVDTNPIWWGKQALKESQFTLSKCIDAVMVLGNSHLFMNRSNKLAVIASHIQESRFLYPGKNGRLGDFFGDPGNPSSEFTPSGSKDGKYELLTAANEVIAEEIKDLMTKSDIEGQHTETLLAGSLAKALCYIHRMNKEVKDNQEMKSRILVIKAAEDSALQYMNFMNVIFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQRSQLILPPPVHVDYRAACFCHRNLIEIGYVCSV 271
BLAST of EMLSAG00000000259 vs. SwissProt
Match: gi|22654149|sp|Q8VD76.1|TF2H3_MOUSE (RecName: Full=General transcription factor IIH subunit 3; AltName: Full=Basic transcription factor 2 34 kDa subunit; Short=BTF2 p34; AltName: Full=General transcription factor IIH polypeptide 3; AltName: Full=TFIIH basal transcription factor complex p34 subunit) HSP 1 Score: 139.428 bits (350), Expect = 4.540e-39 Identity = 85/270 (31.48%), Postives = 126/270 (46.67%), Query Frame = 0
Query: 9 SGGDSKAQLLIIVMDMNP---NQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAAD------------NEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYI---NRRRKENMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
+ + + LL+I++D NP ++ L+ +D ++ AN+HL ++ SN LA + S S LYP + D N DG+YEL T+ + + +L+ T++ L+GSLA AL YI N+ K+N ++ +RIL Q DITGG+Y VP +LLQ+LLW+FLP + R QL LP VD+RAACFCHR L++IG+VCS+
Sbjct: 2 AADEDELNLLVIIVDTNPIWWGKQALKESQFTLSKCMDAVMVLANSHLFMNRSNQLAVIASHIQESRLLYPGKNGGLGDFFGDPGNALPDCNPSGSKDGKYELLTVANEVIAEEIKDLMTKSDIKGQHTETLLAGSLAKALCYIHRVNKAVKDNQEMKSRILVIKAAEDSALQYMNFMNVIFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQRSQLILPPPIHVDYRAACFCHRSLIEIGYVCSV 271
BLAST of EMLSAG00000000259 vs. SwissProt
Match: gi|62901129|sp|O74366.1|TFB4_SCHPO (RecName: Full=RNA polymerase II transcription factor B subunit 4; AltName: Full=RNA polymerase II transcription factor B 34 kDa subunit; AltName: Full=RNA polymerase II transcription factor B p34 subunit) HSP 1 Score: 122.479 bits (306), Expect = 1.248e-32 Identity = 77/246 (31.30%), Postives = 115/246 (46.75%), Query Frame = 0
Query: 17 LLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYP--PPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRKENMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
LL++++D NP L ++ VL ++ F NAHL H N +A L S + +LYP P+ A+ + + Y F V+ V S L+ S +S +T +SG+L+ AL+YIN+ + +N L +RIL Q AD TGG+Y V + LLQ+L+ P +R L P+ VDFRA CFCH++++DIGFVCS+
Sbjct: 25 LLVVILDANPASWYSLSKKVPVSKVLADITVFLNAHLAFHHDNRVAVLASHSDKVEYLYPSIAPEQKVAEVDPTKEANTYRKFREVDDLVLSGMKRLMSSTDKVSRKT--MISGALSRALAYINQVQNKNT-LRSRILIFSLTGDVALQYIPTMNCIFCAQKKNIPINVCNIEGGTLFLEQAADATGGIYLKVDNPKGLLQYLMMSLFPDQNLRKHLNTPNQANVDFRATCFCHKKVLDIGFVCSV 267
BLAST of EMLSAG00000000259 vs. SwissProt
Match: gi|62901295|sp|Q6CD24.1|TFB4_YARLI (RecName: Full=RNA polymerase II transcription factor B subunit 4; AltName: Full=RNA polymerase II transcription factor B 34 kDa subunit; AltName: Full=RNA polymerase II transcription factor B p34 subunit) HSP 1 Score: 98.9821 bits (245), Expect = 1.771e-23 Identity = 73/277 (26.35%), Postives = 121/277 (43.68%), Query Frame = 0
Query: 12 DSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPD--------------DPAADNE---IRQLDGQYELFTLVETTVRSKFIELLQSEAGIS--SQTDSPLSGSLAMALSYINRRR-KENMDLSARIL---------------------------------------------QGADITGGMYFNVPDN-----AALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
D LL I++D + + +++ + ++L F NAHL LH SN++ +G ASG+ LYPP + +D E ++ Y F V+ V+++ +L + Q +S +SG+L++AL +IN+ + + ARIL Q D T G+Y ++ + L+Q+LL F+ +RP + LP+ + VDFRAACF +Q+VDIG+VCS+
Sbjct: 20 DDTPSLLSIIIDAHVPSWEEIKSQISISEAVASILVFINAHLALHNSNSVNVIGYNASGARILYPPKSGVESTRSKEREERSESVSDGEQAPSKKDHSMYRQFKTVDEVVQTELWNMLNHTNYVEEEKQHNSAISGALSLALGFINKHVFVDESRMRARILLLTVGHKNETIQYIPTMNCIFAAQKLKIPVDVCKLGPGSDQVFLQQACDSTHGIYMDISEKNSKTPKGLVQYLLSGFISDPSLRPHIVLPTQSNVDFRAACFLTKQVVDIGYVCSV 296
BLAST of EMLSAG00000000259 vs. SwissProt
Match: gi|62901307|sp|Q6FWA7.1|TFB4_CANGA (RecName: Full=RNA polymerase II transcription factor B subunit 4; AltName: Full=RNA polymerase II transcription factor B 34 kDa subunit; AltName: Full=RNA polymerase II transcription factor B p34 subunit) HSP 1 Score: 85.1149 bits (209), Expect = 1.889e-18 Identity = 66/264 (25.00%), Postives = 113/264 (42.80%), Query Frame = 0
Query: 17 LLIIVMDMNPN-QKLFLH---XPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLD------GQYELFTLVETTVRSKFIELLQSEAGISSQ--TDSPLSGSLAMALSYINRRRK--ENMDLSARIL------------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
LL +V+D++P F H ++T+VL +L+ F N+HL + +N +A + + + G +LYP D + N D Y F V+ T+ +F +L Q E + + S LSG++A AL+Y NR K E++ L +R+L Q D T G+Y ++ ++Q+L +R + P+ VDFR +C+ ++V IG++CS+
Sbjct: 25 LLTVVLDISPRLWAEFDHRSGEKQSVTTVLKSLIVFLNSHLAFNSANQVAVIAAFSQGIQYLYPRSSDTSEQNAGNSKDLSIISSHMYRRFRNVDETLIEEFYKLYQREESLIDKPVQKSTLSGAMAAALTYTNRLTKEFESISLRSRLLVITCGSSREKDEIFQYIPIMNCIFSATKLKCPIDVIKIGGNKQSTFLQQTTDATNGVYIHLESTNGIIQYLSTAMSIDPSLRQIIVRPTQGSVDFRTSCYLTGKVVAIGYICSV 288
BLAST of EMLSAG00000000259 vs. SwissProt
Match: gi|62901344|sp|Q75B93.1|TFB4_ASHGO (RecName: Full=RNA polymerase II transcription factor B subunit 4; AltName: Full=RNA polymerase II transcription factor B 34 kDa subunit; AltName: Full=RNA polymerase II transcription factor B p34 subunit) HSP 1 Score: 83.9593 bits (206), Expect = 5.344e-18 Identity = 67/270 (24.81%), Postives = 110/270 (40.74%), Query Frame = 0
Query: 17 LLIIVMDMNPNQKLF------LHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQ-------YELFTLVETTVRSKFIELLQSEA-----GISSQTDSPLSGSLAMALSYINR--RRKENMDLSARIL------------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
LL +V+D NP KL+ + L VL + + F NAHL + SN ++ + + + G +LYP DD + ++ + + Y F V+ V + + Q E+ G+ S LSG+++ L+YINR E + L +R+L Q D T G Y +V + L+Q+L +R + P+ + VDFR +C+ ++V IGFVCS+
Sbjct: 25 LLTLVIDTNP--KLWAEFDREVGKKGQLMQVLKSTIVFLNAHLSFNNSNQVSVIAACSRGIKYLYPQADDKEGSTKKKKSEDRSIINRNMYRGFRNVDEAVVEELYRVFQQESKQLEDGVPQPFRSTLSGAMSAGLTYINRITHETEGVSLKSRLLVITCGSSASKDEVFQYIPIMNCIFSATKMKCPIDVVKVGGVKESTFLQQATDATNGNYLHVANTDGLIQYLSTAMFIDPSLRQWVVKPNQSSVDFRTSCYLTGKVVAIGFVCSV 292
BLAST of EMLSAG00000000259 vs. SwissProt
Match: gi|62901298|sp|Q6CVX9.1|TFB4_KLULA (RecName: Full=RNA polymerase II transcription factor B subunit 4; AltName: Full=RNA polymerase II transcription factor B 34 kDa subunit; AltName: Full=RNA polymerase II transcription factor B p34 subunit) HSP 1 Score: 77.411 bits (189), Expect = 1.089e-15 Identity = 58/234 (24.79%), Postives = 96/234 (41.03%), Query Frame = 0
Query: 38 LTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSE-AGISSQT--DSPLSGSLAMALSYINR--RRKENMDLSARIL------------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
L L +++ F NAHL + N + + + + G +LYP D + + + Y F V+ V ++ L + E G S+ S LSG+++ AL+Y+NR + EN L +R+L Q D T G+Y +V + L+Q+L +R + P+ VDFR +CF ++V +GFVCS+
Sbjct: 58 LIEALKSIVVFLNAHLAFNSGNQVCLIAAHSEGMKYLYPSADSKPSMSMVS--SDMYRGFRNVDEIVVEQWYRLFKEELEGQESKVSMKSSLSGAMSSALTYVNRILKENENTSLRSRLLVITCGTSQGKDEIFQYIPIMNCIFSATKMKCSIDVVKIGGGIESTFLQQATDATSGVYLHVENTRGLIQYLSTAMFIDPSLRNVIIKPNQGSVDFRTSCFLTGKVVAVGFVCSV 289
BLAST of EMLSAG00000000259 vs. SwissProt
Match: gi|62901135|sp|Q12004.1|TFB4_YEAST (RecName: Full=RNA polymerase II transcription factor B subunit 4; AltName: Full=General transcription and DNA repair factor IIH subunit TFB4; Short=TFIIH subunit TFB4; AltName: Full=RNA polymerase II transcription factor B 34 kDa subunit; AltName: Full=RNA polymerase II transcription factor B p34 subunit) HSP 1 Score: 77.0258 bits (188), Expect = 1.926e-15 Identity = 62/269 (23.05%), Postives = 112/269 (41.64%), Query Frame = 0
Query: 17 LLIIVMDMNPNQKLFL------HXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDP----AADNEIRQ-----LDGQYELFTLVETTVRSKFIELLQSEAGISSQTD--SPLSGSLAMALSYINRRRKENM--DLSARIL------------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
LL +++++ P KL+ + ++ VL+ L+ F NAHL + +N +A + + + G +LYP ++N+ R Y F V+ T+ + +L + E Q S L+G+++ L+Y+NR KE++ L +R+L Q D T G+Y +V L+Q+L +RP + P+ VDFR +C+ ++V +GF+CS+
Sbjct: 25 LLTVIIEIAP--KLWTTFDEEGNEKGSIIKVLEALIVFLNAHLAFNSANKVAVIAAYSQGIKYLYPESTSALKASESENKTRSDLKIINSDMYRRFRNVDETLVEEIYKLFELEKKQIEQNSQRSTLAGAMSAGLTYVNRISKESVTTSLKSRLLVLTCGSGSSKDEIFQYIPIMNCIFSATKMKCPIDVVKIGGSKESTFLQQTTDATNGVYLHVESTEGLIQYLATAMFIDPSLRPIIVKPNHGSVDFRTSCYLTGRVVAVGFICSV 291
BLAST of EMLSAG00000000259 vs. Select Arthropod Genomes
Match: EAA12181.5 (AGAP008522-PA, partial [Anopheles gambiae str. PEST]) HSP 1 Score: 190.274 bits (482), Expect = 2.414e-59 Identity = 99/252 (39.29%), Postives = 139/252 (55.16%), Query Frame = 0
Query: 12 DSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSY---INRRRKENMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
+ A LL+IV+D NP+Q++ P LT LD+++ FANAHLM N LA L + FLYP P P +IRQ+DGQYE+FTLVE T++ K ++ + +++ T+S L+GS++MAL Y INR + +++R+L QG DITGG Y + LQ+LLW+FLP +MR +L LP KVD+RAACFCHR+L+DIG+VCS+
Sbjct: 4 NKDASLLVIVLDTNPSQRIIREKPHNLTQCLDSIVAFANAHLMQKAQNKLAVLACHHHATQFLYPTPGKPL---DIRQVDGQYEVFTLVEKTIKQKLAHMINTAPPLTTPTESLLAGSMSMALCYIARINRNKAPGSKINSRVLVVTGSNECASQYMTYMNVFFTAQKQGVVVDVCALDKALSLLQQGCDITGGQYLRLEQLEGFLQYLLWVFLPDPQMRCKLVLPPPVKVDYRAACFCHRELIDIGYVCSV 252
BLAST of EMLSAG00000000259 vs. Select Arthropod Genomes
Match: XP_016768486.1 (PREDICTED: general transcription factor IIH subunit 3 isoform X2 [Apis mellifera]) HSP 1 Score: 173.326 bits (438), Expect = 1.111e-52 Identity = 101/254 (39.76%), Postives = 135/254 (53.15%), Query Frame = 0
Query: 14 KAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQT----DSPLSGSLAMALSYINRRRKENM---DLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
+ LLII++D+NP Q++ LT LD+ + FANAHLM +N LA + + G+ FLYP D EIRQ+DGQYE FT++E TVR + +++ I+S +S +SG+L MAL YI R +E + L +RIL QG DITGG Y VP LLQ+LLWIFLP +R +L P KVD+RAACFCH++L+DIG+VCSI
Sbjct: 4 ETSLLIIILDVNPVQRIIKQETRILTQCLDSTIVFANAHLMQSSNNQLAVIACHSHGAKFLYPCEDAL----EIRQIDGQYEKFTMIELTVRQQLQKVINE---ITSNKILNGESLISGALTMALCYIARLEREKIAGEKLYSRILVITASNDSATQYMNYMNIFFTAQKMGVILDVCSLDQELTLLQQGCDITGGNYLKVPQLNGLLQYLLWIFLPDPNVRSKLVFPPPVKVDYRAACFCHQELIDIGYVCSI 250
BLAST of EMLSAG00000000259 vs. Select Arthropod Genomes
Match: gb|KYB25378.1| (General transcription factor IIH subunit 3-like protein [Tribolium castaneum]) HSP 1 Score: 173.326 bits (438), Expect = 1.268e-52 Identity = 98/251 (39.04%), Postives = 140/251 (55.78%), Query Frame = 0
Query: 13 SKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSY---INRRRKENMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
S+ LL++++D NP+QK+ P LT +D+++ FAN+HLM N LA + + S F+YP P+ P ++RQ+DGQYE+FT VE T++ +LL +E + T+S L+G++AMAL Y I R + L++RIL QG DITGG+Y VP LLQ+LLW+FLP +R +L LP KVD+RAACFCHR+L+DIG+VCS+
Sbjct: 18 SETSLLVVIVDSNPSQKMLRDNPHVLTHCIDSVIAFANSHLMQKAQNKLAVMACHSKTSEFIYPGPNKPL---DVRQIDGQYEVFTAVEKTIKQNLAKLLATEKS-TLVTESLLAGAIAMALCYIARIQRTKPPGCVLNSRILVVTGSGDSASQYMNYMNVFFTAQKQGIVIDVCALDQHLSLLQQGCDITGGLYLKVPQLQGLLQYLLWVFLPEPPIRQKLVLPPPVKVDYRAACFCHRELIDIGYVCSV 264
BLAST of EMLSAG00000000259 vs. Select Arthropod Genomes
Match: XP_394705.3 (PREDICTED: general transcription factor IIH subunit 3 isoform X1 [Apis mellifera]) HSP 1 Score: 173.326 bits (438), Expect = 1.294e-52 Identity = 101/258 (39.15%), Postives = 136/258 (52.71%), Query Frame = 0
Query: 10 GGDSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQT----DSPLSGSLAMALSYINRRRKENM---DLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
+ + LLII++D+NP Q++ LT LD+ + FANAHLM +N LA + + G+ FLYP D EIRQ+DGQYE FT++E TVR + +++ I+S +S +SG+L MAL YI R +E + L +RIL QG DITGG Y VP LLQ+LLWIFLP +R +L P KVD+RAACFCH++L+DIG+VCSI
Sbjct: 2 SNEIETSLLIIILDVNPVQRIIKQETRILTQCLDSTIVFANAHLMQSSNNQLAVIACHSHGAKFLYPCEDAL----EIRQIDGQYEKFTMIELTVRQQLQKVINE---ITSNKILNGESLISGALTMALCYIARLEREKIAGEKLYSRILVITASNDSATQYMNYMNIFFTAQKMGVILDVCSLDQELTLLQQGCDITGGNYLKVPQLNGLLQYLLWIFLPDPNVRSKLVFPPPVKVDYRAACFCHQELIDIGYVCSI 252
BLAST of EMLSAG00000000259 vs. Select Arthropod Genomes
Match: AAF51411.2 (transcription factor B4 [Drosophila melanogaster]) HSP 1 Score: 171.4 bits (433), Expect = 9.178e-52 Identity = 94/263 (35.74%), Postives = 137/263 (52.09%), Query Frame = 0
Query: 1 MSPSESTGSGGDSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRKE---NMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
M ++ +S LL+IV+D NP+Q P LT +L+ ++ F NAHLM N LA + + FLYP P E+RQ+DGQYE F LVE TV+ + +L + +S+ +S L+GS++MAL YI+R ++ + + +RIL QG DIT G + V LLQ+LLW+FLP+ ++R +L LP KVD+RA+CFCHR+L+DIG+VCS+
Sbjct: 1 MEADQAASKEAESCIDLLVIVLDTNPSQHFVRQNPQNLTQILEAVIAFGNAHLMQKAQNKLAVVSCSHHATNFLYPLPRRQV---ELRQVDGQYEAFNLVEKTVKQQLGSILMNAPRLSAPCESLLAGSMSMALCYISRLQRNLAPGVKMHSRILVVTGSNECASQYMTFMNVFFTAQKLGITIDTCALDKTLSLLQQGCDITSGQFLKVTQLDGLLQYLLWVFLPAPQIRHKLVLPPPPKVDYRASCFCHRELIDIGYVCSV 260
BLAST of EMLSAG00000000259 vs. Select Arthropod Genomes
Match: EFX81722.1 (hypothetical protein DAPPUDRAFT_224195 [Daphnia pulex]) HSP 1 Score: 135.576 bits (340), Expect = 6.513e-38 Identity = 83/254 (32.68%), Postives = 124/254 (48.82%), Query Frame = 0
Query: 17 LLIIVMDMNPNQK-----LFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEA--GISSQTDSPLSGSLAMALSYINRRRKE---NMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
L+ IV+D P +K + + T + + D L+ F NAHLM N LA + + + FLYP + + R GQY++F V++ +R EL+ ++ S+ +DS L G++A AL +I++ ++E + L RIL QG DITGG Y +P LL++LLW+FLP R ++ LP KVD+RAACFCH +LVDIG+VCS+
Sbjct: 12 LVAIVIDATPAKKFASQAIIDNGSTMMNRIFDALIGFGNAHLMQGSHNKLAVIACNSKSTKFLYPSENGDSKSYHNRP--GQYDMFAKVDSDIRHGLSELILKDSIDHDSTTSDSLLGGAMARALCHIHKIQRELSLSHQLKPRILVVSGSSDSALQYMTFMNVFFTAQKENVVIDCCMMDSDSGLLQQGCDITGGQYLRIPTVVGLLEYLLWVFLPGPSCRSKIVLPPPTKVDYRAACFCHHKLVDIGWVCSV 263
BLAST of EMLSAG00000000259 vs. Select Arthropod Genomes
Match: gb|KFM79973.1| (General transcription factor IIH subunit 3, partial [Stegodyphus mimosarum]) HSP 1 Score: 102.449 bits (254), Expect = 6.082e-27 Identity = 44/71 (61.97%), Postives = 55/71 (77.46%), Query Frame = 0
Query: 148 SARILQGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
S + QG DITGGMY V + AALLQ+LLW+FLP A+ R Q+ LPS VD+RAACFCHR L++IG+VCS+
Sbjct: 48 SGLLQQGCDITGGMYLKVQNVAALLQYLLWVFLPGAQTRKQMILPSRVHVDYRAACFCHRNLIEIGYVCSV 118
BLAST of EMLSAG00000000259 vs. Select Arthropod Genomes
Match: gb|EEC10143.1| (RNA polymerase II transcription initiation factor, putative, partial [Ixodes scapularis]) HSP 1 Score: 102.064 bits (253), Expect = 2.899e-25 Identity = 65/204 (31.86%), Postives = 97/204 (47.55%), Query Frame = 0
Query: 12 DSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRKENM---DLSARIL------------------------------------------QGADITGGMYFNVPDNAA 170
+ + LL+ ++D NP L ++ +LD L F N+HLML+P N LA + S + S F+YP P + ++D +DGQYELFT V ++ EL+ S+ S+ +S L+G L++AL YINR KE+ +++RIL QG DITGG Y VP++A
Sbjct: 3 EDEGSLLVAIIDTNPCASLLESDQGIVSKLLDALSVFCNSHLMLNPCNKLAIIASHSHKSTFIYPKPQESSSDT--YSVDGQYELFTEVTGAIKDGVKELVLSDDSESAAGESLLTGGLSLALCYINRIEKESSSQNKIASRILVLSASGESASQYLNFMNVFFTAQKKNVIIDACVLEKDSGLLQQGCDITGGKYMKVPNHAG 204
BLAST of EMLSAG00000000259 vs. Select Arthropod Genomes
Match: gb|KFM79972.1| (General transcription factor IIH subunit 3, partial [Stegodyphus mimosarum]) HSP 1 Score: 78.1814 bits (191), Expect = 8.341e-18 Identity = 43/120 (35.83%), Postives = 68/120 (56.67%), Query Frame = 0
Query: 12 DSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNE-IRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSL 130
D L+++V+D+NP+ ++ + LD ++ F N+HLML P N LA +G S FLYP P P++D E IR DGQYELF+ V+ V + L+ + T+S ++G++
Sbjct: 6 DEDGSLVVVVIDLNPSPQMIKDGECIIPRSLDAIISFCNSHLMLSPLNKLAIIGCHTRQSCFLYPLP--PSSDVEDIRPADGQYELFSCVKNAVHTNVKNLILQSSQDEIYTESLIAGAM 123
BLAST of EMLSAG00000000259 vs. nr
Match: gi|225712364|gb|ACO12028.1| (General transcription factor IIH subunit 3 [Lepeophtheirus salmonis] >gi|290562788|gb|ADD38789.1| General transcription factor IIH subunit 3 [Lepeophtheirus salmonis]) HSP 1 Score: 426.017 bits (1094), Expect = 2.958e-149 Identity = 216/260 (83.08%), Postives = 217/260 (83.46%), Query Frame = 0
Query: 1 MSPSESTGSGGDSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRKENMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
MSPSESTGSGGDSKAQLLIIVMDMNPNQKLFLH PTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRKENMDLSARIL QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCS+
Sbjct: 1 MSPSESTGSGGDSKAQLLIIVMDMNPNQKLFLHDPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRKENMDLSARILVITASGDTASQYMNYMNVFFTAQKLDVLLDTCMLQIDSPLLQQGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSV 260
BLAST of EMLSAG00000000259 vs. nr
Match: gi|225717796|gb|ACO14744.1| (General transcription factor IIH subunit 3 [Caligus clemensi]) HSP 1 Score: 300.442 bits (768), Expect = 8.574e-100 Identity = 156/251 (62.15%), Postives = 180/251 (71.71%), Query Frame = 0
Query: 10 GGDSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRKENMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
GG+ AQLLI+VMDMNPNQ+L L PT LTSVLD+LLCF+NAHL+LHPSNALA +GS++SGSYFLYP E+RQLDGQYELFTLVET+VR+KF +LL++E S DSPLSGSLAMAL+YINR+RKE+ +L ARIL QGADITGG+YFNVPD AALLQFLLWIFLPSAE+RPQLGLP+ KVDFRAACFCHRQLV +GFVCS+
Sbjct: 12 GGE--AQLLILVMDMNPNQRLLLEEPTRLTSVLDSLLCFSNAHLLLHPSNALAAIGSLSSGSYFLYPSSCIDDTSPELRQLDGQYELFTLVETSVRNKFSQLLEAET--SGSEDSPLSGSLAMALAYINRKRKESPELRARILILTASGDTASQYMNYMNVFFTAQKLNVLLDACMLQSDSPLLQQGADITGGLYFNVPDLAALLQFLLWIFLPSAEIRPQLGLPTGVKVDFRAACFCHRQLVGVGFVCSV 258
BLAST of EMLSAG00000000259 vs. nr
Match: gi|1121090506|ref|XP_019535831.1| (PREDICTED: general transcription factor IIH subunit 3-like [Aedes albopictus] >gi|1121162220|ref|XP_019526668.1| PREDICTED: general transcription factor IIH subunit 3-like [Aedes albopictus] >gi|1000206479|gb|KXJ77389.1| hypothetical protein RP20_CCG007693 [Aedes albopictus]) HSP 1 Score: 190.66 bits (483), Expect = 7.331e-57 Identity = 103/252 (40.87%), Postives = 137/252 (54.37%), Query Frame = 0
Query: 12 DSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYI---NRRRKENMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
+ A LL+IVMD NP+Q++ P LT LD+++ FANAHLM N LA L + FLYP P P +IRQ+DGQYE FTLVE T++ K +++ +S T+S L+GS+AMAL YI NR + + +++RIL QG DITGG Y +P LQ+LLW+FLP R +L LP KVD+RAACFCHR+L+DIG+VCS+
Sbjct: 4 NKDASLLVIVMDTNPSQRIIRENPHHLTQCLDSIVAFANAHLMQKAQNKLAVLACHHHATEFLYPTPGKPL---DIRQVDGQYEAFTLVEKTIKQKLAKVIGEAPRLSVPTESLLAGSMAMALCYIARVNRNKPAGVKINSRILVVTGSNECASQYMTYMNVFFTAQKQNVTLDVCALDKPLSLLQQGCDITGGQYLKLPQLDGFLQYLLWVFLPEPLTRCKLVLPPPVKVDYRAACFCHRELIDIGYVCSV 252
BLAST of EMLSAG00000000259 vs. nr
Match: gi|158296528|ref|XP_316918.4| (AGAP008522-PA [Anopheles gambiae str. PEST] >gi|157014753|gb|EAA12181.5| AGAP008522-PA [Anopheles gambiae str. PEST]) HSP 1 Score: 190.274 bits (482), Expect = 1.181e-56 Identity = 99/252 (39.29%), Postives = 139/252 (55.16%), Query Frame = 0
Query: 12 DSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSY---INRRRKENMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
+ A LL+IV+D NP+Q++ P LT LD+++ FANAHLM N LA L + FLYP P P +IRQ+DGQYE+FTLVE T++ K ++ + +++ T+S L+GS++MAL Y INR + +++R+L QG DITGG Y + LQ+LLW+FLP +MR +L LP KVD+RAACFCHR+L+DIG+VCS+
Sbjct: 4 NKDASLLVIVLDTNPSQRIIREKPHNLTQCLDSIVAFANAHLMQKAQNKLAVLACHHHATQFLYPTPGKPL---DIRQVDGQYEVFTLVEKTIKQKLAHMINTAPPLTTPTESLLAGSMSMALCYIARINRNKAPGSKINSRVLVVTGSNECASQYMTYMNVFFTAQKQGVVVDVCALDKALSLLQQGCDITGGQYLRLEQLEGFLQYLLWVFLPDPQMRCKLVLPPPVKVDYRAACFCHRELIDIGYVCSV 252
BLAST of EMLSAG00000000259 vs. nr
Match: gi|1134464134|gb|JAV21604.1| (putative transcription factor tfb4 [Culex tarsalis]) HSP 1 Score: 189.889 bits (481), Expect = 1.652e-56 Identity = 101/252 (40.08%), Postives = 139/252 (55.16%), Query Frame = 0
Query: 12 DSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSY---INRRRKENMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
++ LL+IV+D NP+Q++ P LT LD+++ FANAHLM N LA L + FLYP P P +IRQ+DGQYE FTLVE T++ K ++ +++ T+S L+GS+AMAL Y INR + + +++RIL QG DITGG Y +P LQ+LLW+FLP +MR +L LP KVD+RAACFCHR+L+DIG+VCS+
Sbjct: 4 NNDTSLLVIVLDTNPSQRIIRDNPHHLTQCLDSIVGFANAHLMQKAQNKLAVLACHHHATEFLYPNPGKPL---DIRQVDGQYEQFTLVEKTIKQKLARMINEAPRLAAPTESLLAGSMAMALCYIARINRNKPAGVKINSRILVVTGSNECASQYMTYMNVFFTAQKQNVTLDVCALDKPLSLLQQGCDITGGQYLKLPQLDGFLQYLLWVFLPDPQMRCKLVLPPPVKVDYRAACFCHRELIDIGYVCSV 252
BLAST of EMLSAG00000000259 vs. nr
Match: gi|157132766|ref|XP_001662634.1| (AAEL012523-PA [Aedes aegypti] >gi|108871079|gb|EAT35304.1| AAEL012523-PA [Aedes aegypti]) HSP 1 Score: 189.119 bits (479), Expect = 3.931e-56 Identity = 101/252 (40.08%), Postives = 137/252 (54.37%), Query Frame = 0
Query: 12 DSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYI---NRRRKENMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
+ A LL+IVMD NP+Q++ P LT LD+++ FANAHLM N LA L + FLYP P P +IRQ+DGQYE FTLVE T++ K +++ ++ T+S L+GS+AMAL YI +R + + +++RIL QG DITGG Y +P LQ+LLW+FLP R +L LP KVD+RAACFCHR+L+DIG+VCS+
Sbjct: 4 NKDASLLVIVMDTNPSQRIIRENPHHLTQCLDSIVAFANAHLMQKAQNKLAVLACHHHATEFLYPTPGKPL---DIRQVDGQYEAFTLVEKTIKQKLAKVISEAPRLTVPTESLLAGSMAMALCYIARVHRNKPAGVKINSRILVVTGSNECASQYMTYMNVFFTAQKQNVSLDVCALDKPLSLLQQGCDITGGQYLKLPQLDGFLQYLLWVFLPEPLTRCKLVLPPPVKVDYRAACFCHRELIDIGYVCSV 252
BLAST of EMLSAG00000000259 vs. nr
Match: gi|1108470734|emb|CRL01457.1| (CLUMA_CG014347, isoform A [Clunio marinus]) HSP 1 Score: 188.734 bits (478), Expect = 4.882e-56 Identity = 99/247 (40.08%), Postives = 135/247 (54.66%), Query Frame = 0
Query: 17 LLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRKEN---MDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
LL+I +D NP+Q + P LT++L+++ F N+HLM P N LA +G S FLYP D E+RQ+DGQYE FTLVE ++++ +++ + ++S +S L+G LAMAL YI R +K +L+ RIL QG DITGG Y VP LL++LLWIFLP +R +L LP KVD+RAACFCHR+L+DIGFVCS+
Sbjct: 11 LLVIALDTNPSQSILKRKPNLLTNILNSISAFGNSHLMQKPQNKLAVIGCHHHTSKFLYPSTDKSL---EVRQIDGQYEYFTLVEKSIKTNLADMITNAPKVASNNESMLAGCLAMALCYITRIKKSQPPGCNLNTRILVITGSEDSAHQYMTYMNVFFTAQKEKVVIDICALDNTLVLLQQGCDITGGQYLKVPQIEGLLEYLLWIFLPDPAIRSKLALPPPVKVDYRAACFCHRELIDIGFVCSV 254
BLAST of EMLSAG00000000259 vs. nr
Match: gi|357624804|gb|EHJ75440.1| (putative transcription factor TFIIH-subunit [Danaus plexippus]) HSP 1 Score: 188.734 bits (478), Expect = 5.494e-56 Identity = 98/251 (39.04%), Postives = 138/251 (54.98%), Query Frame = 0
Query: 13 SKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRKEN---MDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
S + LL+I++D NPNQ+ P LT LD ++ FAN+HLM N LA +G S +LYP P P ++RQ+DGQYELFTLVE T++ + + L++S+ +S L+G++AM L +I R R+E + + +R+L QG DITGG+Y VP LLQ+LLW+FLP A R +L LP +VD+RAACFCHR+L+ IG+VCS+
Sbjct: 8 SDSSLLVIIVDTNPNQRYITEDPKVLTGCLDAVIAFANSHLMQKSRNQLAVIGCHFHKSEYLYPSPGKPL---DVRQIDGQYELFTLVEKTIKMRLVNLIKSQPQEERPGESLLAGAMAMGLCFIARMRREQPPGLRMVSRMLVVTGSSDTAAQYINYMNVFFTAQKQQVLLDVCSLDKHLSLLQQGCDITGGLYLKVPSLEGLLQYLLWVFLPEASERRELVLPGRGRVDYRAACFCHRELLTIGYVCSV 255
BLAST of EMLSAG00000000259 vs. nr
Match: gi|546681611|gb|ERL91675.1| (hypothetical protein D910_09003 [Dendroctonus ponderosae]) HSP 1 Score: 187.578 bits (475), Expect = 1.685e-55 Identity = 101/247 (40.89%), Postives = 139/247 (56.28%), Query Frame = 0
Query: 17 LLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRKEN---MDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
LL++++D NP QK+ LT+++D+++ F+N+HLM N LA + + S F+YP P ++RQ+DGQYE F LVE TV+ ELL SE+ ++ T+S L+G++AMAL YI R ++ L++RIL QG DITGGMY VP ALLQFLLW+FLP +R +L LP KVD+RAACFCHR+L+DIGFVCS+
Sbjct: 22 LLVVILDTNPTQKMLRDKQNQLTNIVDSVVAFSNSHLMQKAQNKLAVMACHSKTSQFIYPGAKKPL---DVRQVDGQYEAFLLVEKTVKQNLAELLASESS-TAVTESLLAGAIAMALCYIARLQRTKPPGSKLNSRILVVSGSGDSASQYMNYMNVFFTAQKLNVVLDVCALDQHLSLLQQGCDITGGMYLKVPQITALLQFLLWVFLPEPPIREKLVLPPPVKVDYRAACFCHRELIDIGFVCSV 264
BLAST of EMLSAG00000000259 vs. nr
Match: gi|170028289|ref|XP_001842028.1| (TFIIH basal transcription factor complex p34 subunit [Culex quinquefasciatus] >gi|167874183|gb|EDS37566.1| TFIIH basal transcription factor complex p34 subunit [Culex quinquefasciatus]) HSP 1 Score: 187.193 bits (474), Expect = 2.073e-55 Identity = 102/256 (39.84%), Postives = 139/256 (54.30%), Query Frame = 0
Query: 12 DSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSY---INRRRKENMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQ----LGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
++ LL+IV+D NP+Q++ P LT LD+++ FANAHLM N LA L + FLYP P P +IRQ+DGQYE FTLVE T++ K ++ +++ T+S L+GS+AMAL Y INR + + +++RIL QG DITGG Y +P LQ+LLW+FLP +M PQ L LP KVD+RAACFCHR+L+DIG+VCS+
Sbjct: 4 NNDTSLLVIVLDTNPSQRIIRENPHHLTQCLDSIVGFANAHLMQKAHNKLAVLACHHHATEFLYPNPGKPL---DIRQVDGQYEQFTLVEKTIKQKLARMINEAPRLAAPTESLLAGSMAMALCYIARINRNKPAGVKINSRILVVTGSNECASQYMTYMNVFFTAQKQNVTLDVCALDKPLSLLQQGCDITGGQYLKLPQLDGFLQYLLWVFLPDPQMHPQMRCKLVLPPPVKVDYRAACFCHRELIDIGYVCSV 256
BLAST of EMLSAG00000000259 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold297_size217559-snap-gene-0.27 (protein:Tk11578 transcript:maker-scaffold297_size217559-snap-gene-0.27-mRNA-1 annotation:"general transcription factor iih subunit 3") HSP 1 Score: 196.052 bits (497), Expect = 2.272e-62 Identity = 108/260 (41.54%), Postives = 146/260 (56.15%), Query Frame = 0
Query: 8 GSGGDSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISS--QTDSPLSGSLAMALSYINRRRKE---NMDLSARIL------------------------------------------QGADITGGMYFNVPDNA--ALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
G + + QLL++V+DMNPNQ F P +L LD+ + AN+HLMLHP+NA+A + S + FLYP D + +RQ DGQ+E F VE T+R + +L++E ++ +S LSG+L+MALSYI+RRR+E L++R+L QGADITGG+Y V ALLQFL WIFLP +R L LPS ++VD+RAACFCHR L+DIGFVCS+
Sbjct: 17 GVLAEPQGQLLVLVLDMNPNQVFFTKQPESLFHWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQDESDNLRQRDGQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCMLEKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSV 276 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000259 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 25
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BLAST of EMLSAG00000000259 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 2
BLAST of EMLSAG00000000259 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000000259 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 13
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BLAST of EMLSAG00000000259 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 9
BLAST of EMLSAG00000000259 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000000259 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s103:1015218..1016337+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000259-683025 ID=EMLSAG00000000259-683025|Name=EMLSAG00000000259|organism=Lepeophtheirus salmonis|type=gene|length=1120bp|location=Sequence derived from alignment at LSalAtl2s103:1015218..1016337+ (Lepeophtheirus salmonis)back to top Add to Basket
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