EMLSAG00000000259, EMLSAG00000000259-683025 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000000259
Unique NameEMLSAG00000000259-683025
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000000259 vs. GO
Match: - (symbol:AN0138 species:162425 "Aspergillus nidulans" [GO:0006289 "nucleotide-excision repair" evidence=IEA] [GO:0000439 "core TFIIH complex" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0003674 "molecular_function" evidence=ND] InterPro:IPR004600 Pfam:PF03850 GO:GO:0006355 EMBL:BN001308 GO:GO:0006289 GO:GO:0000439 HOGENOM:HOG000175900 PANTHER:PTHR12831 OMA:MVMGNSH OrthoDB:EOG7GXPNJ EnsemblFungi:CADANIAT00002608 Uniprot:C8VQI5)

HSP 1 Score: 81.2629 bits (199), Expect = 1.159e-16
Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = 0 
Query:  153 QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
            Q +D T G+Y ++ +   LLQ+L+  FLP    R  L LP+   VDFRAACFCHR++VDIGFVCSI
Sbjct:  268 QASDATKGIYMSLSEPRGLLQYLMMAFLPDQRSRKHLILPTRVDVDFRAACFCHRRVVDIGFVCSI 333

HSP 2 Score: 58.151 bits (139), Expect = 8.555e-9
Identity = 44/158 (27.85%), Postives = 70/158 (44.30%), Query Frame = 0 
Query:    9 SGGDSKAQLLIIVMDMNPNQKLFLHXPTA----LTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAA------------DNEIRQLDG--------QYELFTLVETTVRSKFIELLQS--EAGISSQTDSPLSGSLAMALSYINRR 140
            S  D    LL +++D NP+    L          ++ L N+L F NAHL  + +N +A + S    + +LYP P+ P              +N +    G        +Y  F +VE  V S    L+ S     + S   + ++G+L +ALS+INRR
Sbjct:   13 SAHDPAPSLLTVIIDTNPHAWALLEQNEKNQLPFSTALANILVFLNAHLACNYANEVAVVASHTHKAAWLYPSPNSPTTSADSDGDVTMSNNNHMSTGGGSGKPSQVNKYRPFRIVEEQVTSNLRHLVDSTNRDDLDSGASTMMAGALTLALSHINRR 170
[Close]
BLAST of EMLSAG00000000259 vs. GO
Match: - (symbol:An18g03180 "Putative uncharacterized protein An18g03180" species:425011 "Aspergillus niger CBS 513.88" [GO:0003674 "molecular_function" evidence=ND] InterPro:IPR004600 Pfam:PF03850 GO:GO:0006355 EMBL:AM270401 GO:GO:0006289 GO:GO:0000439 HOGENOM:HOG000175900 KO:K03143 PANTHER:PTHR12831 OrthoDB:EOG7GXPNJ RefSeq:XP_001398778.1 STRING:5061.CADANGAP00013696 EnsemblFungi:CADANGAT00013953 GeneID:4989880 KEGG:ang:ANI_1_400164 Uniprot:A2RAH6)

HSP 1 Score: 80.4925 bits (197), Expect = 2.298e-16
Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = 0 
Query:  153 QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
            Q +D T G+Y  + +   LLQ+L+  FLP    R  L LP+   VDFRAACFCHR++VD+GFVCSI
Sbjct:  253 QASDATKGVYMALDEPKGLLQYLMMAFLPDQRSRRHLVLPTRVDVDFRAACFCHRRVVDVGFVCSI 318

HSP 2 Score: 60.4622 bits (145), Expect = 1.293e-9
Identity = 44/153 (28.76%), Postives = 71/153 (46.41%), Query Frame = 0 
Query:    9 SGGDSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPD----------DPAADNEIRQLD---------GQYELFTLVETTVRSKFIELLQ--SEAGISSQTDSPLSGSLAMALSYINRR 140
            S  D    LL I++D NP+    L+    L++ + N+L F NAHL  + +N +A + S  S + +LYP             D   D  +R             +Y  F +VE  V +    L+   +   + S T + ++G+L +ALS+INRR
Sbjct:   13 SAHDRPPSLLTIILDTNPHAWALLNPSLPLSTAIANILVFINAHLACNYANEVAVVSSHTSQATWLYPVEKATTTTTANNLDSDGDISMRSQQPPPSTHTNINKYRPFRIVEEQVSTHLHNLMSQTTPETLQSTTSTMMAGALTLALSHINRR 165
[Close]
BLAST of EMLSAG00000000259 vs. GO
Match: - (symbol:ASPNIDRAFT_42792 "Putative uncharacterized protein" species:380704 "Aspergillus niger ATCC 1015" [GO:0003674 "molecular_function" evidence=ND] InterPro:IPR004600 Pfam:PF03850 GO:GO:0006355 GO:GO:0006289 GO:GO:0000439 PANTHER:PTHR12831 OrthoDB:EOG7GXPNJ EMBL:ACJE01000020 Uniprot:G3YDV8)

HSP 1 Score: 80.4925 bits (197), Expect = 2.367e-16
Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = 0 
Query:  153 QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
            Q +D T G+Y  + +   LLQ+L+  FLP    R  L LP+   VDFRAACFCHR++VD+GFVCSI
Sbjct:  254 QASDATKGVYMALDEPKGLLQYLMMAFLPDQRSRRHLVLPTRVDVDFRAACFCHRRVVDVGFVCSI 319

HSP 2 Score: 61.2326 bits (147), Expect = 8.349e-10
Identity = 43/154 (27.92%), Postives = 69/154 (44.81%), Query Frame = 0 
Query:    9 SGGDSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLD--------------------GQYELFTLVETTVRSKFIELLQ--SEAGISSQTDSPLSGSLAMALSYINRR 140
            S  D    LL I++D NP+    L+    L++ + N+L F NAHL  + +N +A + S  S + +LYP             LD                     +Y  F +VE  V +    L+   +   + S T + ++G+L +ALS+INRR
Sbjct:   13 SAHDRPPSLLTIILDTNPHAWALLNPSLPLSTAIANILVFINAHLACNYANEVAVVSSHTSQATWLYPVEKAATTTTAANNLDSDGDISMRSQQPPPSTHTNVNKYRPFRIVEEQVSTHLHNLMSQTTPETLQSTTSTMMAGALTLALSHINRR 166
[Close]
BLAST of EMLSAG00000000259 vs. GO
Match: - (symbol:An18g03180 species:5061 "Aspergillus niger" [GO:0006289 "nucleotide-excision repair" evidence=IEA] [GO:0000439 "core TFIIH complex" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0003674 "molecular_function" evidence=ND] InterPro:IPR004600 Pfam:PF03850 GO:GO:0006355 GO:GO:0006289 GO:GO:0000439 PANTHER:PTHR12831 OrthoDB:EOG7GXPNJ EMBL:ACJE01000020 Uniprot:G3YDV8)

HSP 1 Score: 80.4925 bits (197), Expect = 2.367e-16
Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = 0 
Query:  153 QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
            Q +D T G+Y  + +   LLQ+L+  FLP    R  L LP+   VDFRAACFCHR++VD+GFVCSI
Sbjct:  254 QASDATKGVYMALDEPKGLLQYLMMAFLPDQRSRRHLVLPTRVDVDFRAACFCHRRVVDVGFVCSI 319

HSP 2 Score: 61.2326 bits (147), Expect = 8.349e-10
Identity = 43/154 (27.92%), Postives = 69/154 (44.81%), Query Frame = 0 
Query:    9 SGGDSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLD--------------------GQYELFTLVETTVRSKFIELLQ--SEAGISSQTDSPLSGSLAMALSYINRR 140
            S  D    LL I++D NP+    L+    L++ + N+L F NAHL  + +N +A + S  S + +LYP             LD                     +Y  F +VE  V +    L+   +   + S T + ++G+L +ALS+INRR
Sbjct:   13 SAHDRPPSLLTIILDTNPHAWALLNPSLPLSTAIANILVFINAHLACNYANEVAVVSSHTSQATWLYPVEKAATTTTAANNLDSDGDISMRSQQPPPSTHTNVNKYRPFRIVEEQVSTHLHNLMSQTTPETLQSTTSTMMAGALTLALSHINRR 166
[Close]
BLAST of EMLSAG00000000259 vs. GO
Match: - (symbol:AFUA_5G11580 "Transcription factor TFIIH subunit Tfb4, putative" species:330879 "Aspergillus fumigatus Af293" [GO:0003674 "molecular_function" evidence=ND] InterPro:IPR004600 Pfam:PF03850 GO:GO:0006355 EMBL:AAHF01000003 GO:GO:0006289 GO:GO:0000439 HOGENOM:HOG000175900 KO:K03143 PANTHER:PTHR12831 OMA:MVMGNSH OrthoDB:EOG7GXPNJ RefSeq:XP_753492.1 STRING:5085.CADAFUAP00006341 EnsemblFungi:CADAFUAT00006341 GeneID:3511234 KEGG:afm:AFUA_5G11580 Uniprot:Q4WVC2)

HSP 1 Score: 80.1073 bits (196), Expect = 2.767e-16
Identity = 35/66 (53.03%), Postives = 46/66 (69.70%), Query Frame = 0 
Query:  153 QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
            Q +D T G+Y ++ +   LLQ+L+  FLP    R  L +P+   VDFRAACFCHR++VDIGFVCSI
Sbjct:  259 QASDATKGVYMSLSEPRGLLQYLMMAFLPDQRSRRHLVIPTRVDVDFRAACFCHRRVVDIGFVCSI 324

HSP 2 Score: 66.6254 bits (161), Expect = 1.104e-11
Identity = 47/159 (29.56%), Postives = 77/159 (48.43%), Query Frame = 0 
Query:    9 SGGDSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYP---PPDDPAADNEI-RQLDG---------------------QYELFTLVETTVRSKFIELLQSEAG--ISSQTDSPLSGSLAMALSYINRR 140
            S  D    LL IV+D NP+    L     L++ + N+L F NAHL  + +N +A + S +  + +LYP     D+  + ++  R  DG                     +Y  F +VE  V     EL+ S +G  +++ T + ++G+L +ALS+INRR
Sbjct:   13 SASDPAPSLLTIVLDTNPHAWALLEDSLPLSTAIANILVFVNAHLACNYANEVAVVASHSQKATWLYPCETKEDNGKSTSKTGRDEDGDVAMNGSGAGAGAGFAAAQVNKYRPFRIVEEQVTRNLRELMDSTSGADVAATTSTMMAGALTLALSHINRR 171
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BLAST of EMLSAG00000000259 vs. C. finmarchicus
Match: gi|592796352|gb|GAXK01158216.1| (TSA: Calanus finmarchicus comp66659_c2_seq1 transcribed RNA sequence)

HSP 1 Score: 172.94 bits (437), Expect = 5.961e-51
Identity = 95/250 (38.00%), Postives = 140/250 (56.00%), Query Frame = 0 
Query:   16 QLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNE-IRQLDGQYELFTLVETTVRSKF-IELLQSEAGISSQTDSPLSGSLAMALSYINRR---RKENMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
            QLL++VMD+NP+Q LF   P + + +L++++   N HLML+P+N +A + + A+   +LYP   DP+   + +RQ DGQYE F  VET ++ +  + L +   G  + ++S LSG+LAMAL+YIN++   R  +   S R++                                          QG+DITGG+Y  V     LLQ+L W+FLP   +R  LG P   +VD+RAACFCHRQLVD+GFVCS+
Sbjct:   60 QLLVVVMDINPHQLLFARQPGSFSQLLNSVMSLLNQHLMLNPTNQVALVAAHATDCSYLYP---DPSGGGQLLRQQDGQYEEFYQVETVIKERVGLVLAKDREGGQASSESLLSGALAMALAYINKQQASRVASEKFSPRLMVMSATGDSAAQYMNYMNVFFTAQKLNIPLDTCMILQDSGLLQQGSDITGGLYVKVEQLTGLLQYLTWLFLPGPSLRKMLGAPPPVRVDYRAACFCHRQLVDVGFVCSV 800
[Close]
BLAST of EMLSAG00000000259 vs. C. finmarchicus
Match: gi|592935676|gb|GAXK01022877.1| (TSA: Calanus finmarchicus comp946102_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 30.4166 bits (67), Expect = 5.689e+0
Identity = 19/67 (28.36%), Postives = 36/67 (53.73%), Query Frame = 0 
Query:  105 RSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRKENMDLSARILQGADITGGMYFNVPDNAAL 171
            R + + +  +   ISS   + L G+  MA+  + R+ ++ +DL++R+    D  GG+   VPD  +L
Sbjct:  980 RQQRVVICCTSCRISSDLHNDLEGNGVMAM--VLRKVEDQVDLTSRMSVWLDNPGGVPLLVPDEVSL 1174
[Close]
BLAST of EMLSAG00000000259 vs. L. salmonis peptides
Match: EMLSAP00000000259 (pep:novel supercontig:LSalAtl2s:LSalAtl2s103:1015218:1016337:1 gene:EMLSAG00000000259 transcript:EMLSAT00000000259 description:"snap_masked-LSalAtl2s103-processed-gene-10.11")

HSP 1 Score: 448.743 bits (1153), Expect = 1.280e-161
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0 
Query:    1 MSPSESTGSGGDSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRKENMDLSARILQGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSIK 219
            MSPSESTGSGGDSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRKENMDLSARILQGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSIK
Sbjct:    1 MSPSESTGSGGDSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRKENMDLSARILQGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSIK 219
[Close]
BLAST of EMLSAG00000000259 vs. SwissProt
Match: gi|50403772|sp|Q13889.2|TF2H3_HUMAN (RecName: Full=General transcription factor IIH subunit 3; AltName: Full=Basic transcription factor 2 34 kDa subunit; Short=BTF2 p34; AltName: Full=General transcription factor IIH polypeptide 3; AltName: Full=TFIIH basal transcription factor complex p34 subunit)

HSP 1 Score: 144.05 bits (362), Expect = 7.126e-41
Identity = 88/266 (33.08%), Postives = 125/266 (46.99%), Query Frame = 0 
Query:   12 DSKAQLLIIVMDMNP---NQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYP-----------PPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRKE---NMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
            + +  LL+IV+D NP    ++        L+  +D ++   N+HL ++ SN LA + S    S FLYP            P +P   N     DG+YEL T     +  +  +L+         T++ L+GSLA AL YI+R  KE   N ++ +RIL                                          Q  DITGG+Y  VP   +LLQ+LLW+FLP  + R QL LP    VD+RAACFCHR L++IG+VCS+
Sbjct:    5 EDELNLLVIVVDANPIWWGKQALKESQFTLSKCIDAVMVLGNSHLFMNRSNKLAVIASHIQESRFLYPGKNGRLGDFFGDPGNPPEFNPSGSKDGKYELLTSANEVIVEEIKDLMTKSDIKGQHTETLLAGSLAKALCYIHRMNKEVKDNQEMKSRILVIKAAEDSALQYMNFMNVIFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQRSQLILPPPVHVDYRAACFCHRNLIEIGYVCSV 270
[Close]
BLAST of EMLSAG00000000259 vs. SwissProt
Match: gi|81888006|sp|Q561R7.1|TF2H3_RAT (RecName: Full=General transcription factor IIH subunit 3; AltName: Full=General transcription factor IIH polypeptide 3)

HSP 1 Score: 142.124 bits (357), Expect = 5.150e-40
Identity = 87/270 (32.22%), Postives = 126/270 (46.67%), Query Frame = 0 
Query:    9 SGGDSKAQLLIIVMDMNP---NQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAAD------------NEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRK---ENMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
            +  + +  LL+I++D NP    ++        L+  +D ++  ANAHL ++ SN LA + S    S FLYP  +    D            N     DG+YEL T     +  +  +L+         T++ L+GSLA AL YI+R  K   +N ++ +RIL                                          Q  DITGG+Y  VP   +LLQ+LLW+FLP  + R QL LP    VD+RAACFCHR L++IG+VCS+
Sbjct:    2 AADEDELNLLVIIVDTNPIWWGKQALKESQFTLSKCMDAVMVLANAHLFMNRSNQLAVIASHIQESRFLYPGKNGRLGDFFGDPGNALPDCNPSGSKDGKYELLTAANEVIAEEIKDLMTKSDIKGQHTETLLAGSLAKALCYIHRASKAVKDNQEMKSRILVIKAAEDSALQYMNFMNVIFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQRSQLILPPPIHVDYRAACFCHRSLIEIGYVCSV 271
[Close]
BLAST of EMLSAG00000000259 vs. SwissProt
Match: gi|122131719|sp|Q05B56.1|TF2H3_BOVIN (RecName: Full=General transcription factor IIH subunit 3; AltName: Full=General transcription factor IIH polypeptide 3)

HSP 1 Score: 140.969 bits (354), Expect = 1.111e-39
Identity = 86/267 (32.21%), Postives = 127/267 (47.57%), Query Frame = 0 
Query:   12 DSKAQLLIIVMDMNP---NQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYP-----------PPDDPAAD-NEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRKE---NMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
            + +  LL+I++D NP    ++        L+  +D ++   N+HL ++ SN LA + S    S FLYP            P +P+++       DG+YEL T     +  +  +L+         T++ L+GSLA AL YI+R  KE   N ++ +RIL                                          Q  DITGG+Y  VP   +LLQ+LLW+FLP  + R QL LP    VD+RAACFCHR L++IG+VCS+
Sbjct:    5 EDELNLLVIIVDTNPIWWGKQALKESQFTLSKCIDAVMVLGNSHLFMNRSNKLAVIASHIQESRFLYPGKNGRLGDFFGDPGNPSSEFTPSGSKDGKYELLTAANEVIAEEIKDLMTKSDIEGQHTETLLAGSLAKALCYIHRMNKEVKDNQEMKSRILVIKAAEDSALQYMNFMNVIFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQRSQLILPPPVHVDYRAACFCHRNLIEIGYVCSV 271
[Close]
BLAST of EMLSAG00000000259 vs. SwissProt
Match: gi|22654149|sp|Q8VD76.1|TF2H3_MOUSE (RecName: Full=General transcription factor IIH subunit 3; AltName: Full=Basic transcription factor 2 34 kDa subunit; Short=BTF2 p34; AltName: Full=General transcription factor IIH polypeptide 3; AltName: Full=TFIIH basal transcription factor complex p34 subunit)

HSP 1 Score: 139.428 bits (350), Expect = 4.540e-39
Identity = 85/270 (31.48%), Postives = 126/270 (46.67%), Query Frame = 0 
Query:    9 SGGDSKAQLLIIVMDMNP---NQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAAD------------NEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYI---NRRRKENMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
            +  + +  LL+I++D NP    ++        L+  +D ++  AN+HL ++ SN LA + S    S  LYP  +    D            N     DG+YEL T+    +  +  +L+         T++ L+GSLA AL YI   N+  K+N ++ +RIL                                          Q  DITGG+Y  VP   +LLQ+LLW+FLP  + R QL LP    VD+RAACFCHR L++IG+VCS+
Sbjct:    2 AADEDELNLLVIIVDTNPIWWGKQALKESQFTLSKCMDAVMVLANSHLFMNRSNQLAVIASHIQESRLLYPGKNGGLGDFFGDPGNALPDCNPSGSKDGKYELLTVANEVIAEEIKDLMTKSDIKGQHTETLLAGSLAKALCYIHRVNKAVKDNQEMKSRILVIKAAEDSALQYMNFMNVIFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQRSQLILPPPIHVDYRAACFCHRSLIEIGYVCSV 271
[Close]
BLAST of EMLSAG00000000259 vs. SwissProt
Match: gi|62901129|sp|O74366.1|TFB4_SCHPO (RecName: Full=RNA polymerase II transcription factor B subunit 4; AltName: Full=RNA polymerase II transcription factor B 34 kDa subunit; AltName: Full=RNA polymerase II transcription factor B p34 subunit)

HSP 1 Score: 122.479 bits (306), Expect = 1.248e-32
Identity = 77/246 (31.30%), Postives = 115/246 (46.75%), Query Frame = 0 
Query:   17 LLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYP--PPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRKENMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
            LL++++D NP     L     ++ VL ++  F NAHL  H  N +A L S +    +LYP   P+   A+ +  +    Y  F  V+  V S    L+ S   +S +T   +SG+L+ AL+YIN+ + +N  L +RIL                                          Q AD TGG+Y  V +   LLQ+L+    P   +R  L  P+   VDFRA CFCH++++DIGFVCS+
Sbjct:   25 LLVVILDANPASWYSLSKKVPVSKVLADITVFLNAHLAFHHDNRVAVLASHSDKVEYLYPSIAPEQKVAEVDPTKEANTYRKFREVDDLVLSGMKRLMSSTDKVSRKT--MISGALSRALAYINQVQNKNT-LRSRILIFSLTGDVALQYIPTMNCIFCAQKKNIPINVCNIEGGTLFLEQAADATGGIYLKVDNPKGLLQYLMMSLFPDQNLRKHLNTPNQANVDFRATCFCHKKVLDIGFVCSV 267
[Close]
BLAST of EMLSAG00000000259 vs. SwissProt
Match: gi|62901295|sp|Q6CD24.1|TFB4_YARLI (RecName: Full=RNA polymerase II transcription factor B subunit 4; AltName: Full=RNA polymerase II transcription factor B 34 kDa subunit; AltName: Full=RNA polymerase II transcription factor B p34 subunit)

HSP 1 Score: 98.9821 bits (245), Expect = 1.771e-23
Identity = 73/277 (26.35%), Postives = 121/277 (43.68%), Query Frame = 0 
Query:   12 DSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPD--------------DPAADNE---IRQLDGQYELFTLVETTVRSKFIELLQSEAGIS--SQTDSPLSGSLAMALSYINRRR-KENMDLSARIL---------------------------------------------QGADITGGMYFNVPDN-----AALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
            D    LL I++D +      +    +++  + ++L F NAHL LH SN++  +G  ASG+  LYPP                +  +D E    ++    Y  F  V+  V+++   +L     +    Q +S +SG+L++AL +IN+    +   + ARIL                                             Q  D T G+Y ++ +        L+Q+LL  F+    +RP + LP+ + VDFRAACF  +Q+VDIG+VCS+
Sbjct:   20 DDTPSLLSIIIDAHVPSWEEIKSQISISEAVASILVFINAHLALHNSNSVNVIGYNASGARILYPPKSGVESTRSKEREERSESVSDGEQAPSKKDHSMYRQFKTVDEVVQTELWNMLNHTNYVEEEKQHNSAISGALSLALGFINKHVFVDESRMRARILLLTVGHKNETIQYIPTMNCIFAAQKLKIPVDVCKLGPGSDQVFLQQACDSTHGIYMDISEKNSKTPKGLVQYLLSGFISDPSLRPHIVLPTQSNVDFRAACFLTKQVVDIGYVCSV 296
[Close]
BLAST of EMLSAG00000000259 vs. SwissProt
Match: gi|62901307|sp|Q6FWA7.1|TFB4_CANGA (RecName: Full=RNA polymerase II transcription factor B subunit 4; AltName: Full=RNA polymerase II transcription factor B 34 kDa subunit; AltName: Full=RNA polymerase II transcription factor B p34 subunit)

HSP 1 Score: 85.1149 bits (209), Expect = 1.889e-18
Identity = 66/264 (25.00%), Postives = 113/264 (42.80%), Query Frame = 0 
Query:   17 LLIIVMDMNPN-QKLFLH---XPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLD------GQYELFTLVETTVRSKFIELLQSEAGISSQ--TDSPLSGSLAMALSYINRRRK--ENMDLSARIL------------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
            LL +V+D++P     F H      ++T+VL +L+ F N+HL  + +N +A + + + G  +LYP   D +  N     D        Y  F  V+ T+  +F +L Q E  +  +    S LSG++A AL+Y NR  K  E++ L +R+L                                                Q  D T G+Y ++     ++Q+L         +R  +  P+   VDFR +C+   ++V IG++CS+
Sbjct:   25 LLTVVLDISPRLWAEFDHRSGEKQSVTTVLKSLIVFLNSHLAFNSANQVAVIAAFSQGIQYLYPRSSDTSEQNAGNSKDLSIISSHMYRRFRNVDETLIEEFYKLYQREESLIDKPVQKSTLSGAMAAALTYTNRLTKEFESISLRSRLLVITCGSSREKDEIFQYIPIMNCIFSATKLKCPIDVIKIGGNKQSTFLQQTTDATNGVYIHLESTNGIIQYLSTAMSIDPSLRQIIVRPTQGSVDFRTSCYLTGKVVAIGYICSV 288
[Close]
BLAST of EMLSAG00000000259 vs. SwissProt
Match: gi|62901344|sp|Q75B93.1|TFB4_ASHGO (RecName: Full=RNA polymerase II transcription factor B subunit 4; AltName: Full=RNA polymerase II transcription factor B 34 kDa subunit; AltName: Full=RNA polymerase II transcription factor B p34 subunit)

HSP 1 Score: 83.9593 bits (206), Expect = 5.344e-18
Identity = 67/270 (24.81%), Postives = 110/270 (40.74%), Query Frame = 0 
Query:   17 LLIIVMDMNPNQKLF------LHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQ-------YELFTLVETTVRSKFIELLQSEA-----GISSQTDSPLSGSLAMALSYINR--RRKENMDLSARIL------------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
            LL +V+D NP  KL+      +     L  VL + + F NAHL  + SN ++ + + + G  +LYP  DD     + ++ + +       Y  F  V+  V  +   + Q E+     G+     S LSG+++  L+YINR     E + L +R+L                                                Q  D T G Y +V +   L+Q+L         +R  +  P+ + VDFR +C+   ++V IGFVCS+
Sbjct:   25 LLTLVIDTNP--KLWAEFDREVGKKGQLMQVLKSTIVFLNAHLSFNNSNQVSVIAACSRGIKYLYPQADDKEGSTKKKKSEDRSIINRNMYRGFRNVDEAVVEELYRVFQQESKQLEDGVPQPFRSTLSGAMSAGLTYINRITHETEGVSLKSRLLVITCGSSASKDEVFQYIPIMNCIFSATKMKCPIDVVKVGGVKESTFLQQATDATNGNYLHVANTDGLIQYLSTAMFIDPSLRQWVVKPNQSSVDFRTSCYLTGKVVAIGFVCSV 292
[Close]
BLAST of EMLSAG00000000259 vs. SwissProt
Match: gi|62901298|sp|Q6CVX9.1|TFB4_KLULA (RecName: Full=RNA polymerase II transcription factor B subunit 4; AltName: Full=RNA polymerase II transcription factor B 34 kDa subunit; AltName: Full=RNA polymerase II transcription factor B p34 subunit)

HSP 1 Score: 77.411 bits (189), Expect = 1.089e-15
Identity = 58/234 (24.79%), Postives = 96/234 (41.03%), Query Frame = 0 
Query:   38 LTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSE-AGISSQT--DSPLSGSLAMALSYINR--RRKENMDLSARIL------------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
            L   L +++ F NAHL  +  N +  + + + G  +LYP  D   + + +      Y  F  V+  V  ++  L + E  G  S+    S LSG+++ AL+Y+NR  +  EN  L +R+L                                                Q  D T G+Y +V +   L+Q+L         +R  +  P+   VDFR +CF   ++V +GFVCS+
Sbjct:   58 LIEALKSIVVFLNAHLAFNSGNQVCLIAAHSEGMKYLYPSADSKPSMSMVS--SDMYRGFRNVDEIVVEQWYRLFKEELEGQESKVSMKSSLSGAMSSALTYVNRILKENENTSLRSRLLVITCGTSQGKDEIFQYIPIMNCIFSATKMKCSIDVVKIGGGIESTFLQQATDATSGVYLHVENTRGLIQYLSTAMFIDPSLRNVIIKPNQGSVDFRTSCFLTGKVVAVGFVCSV 289
[Close]
BLAST of EMLSAG00000000259 vs. SwissProt
Match: gi|62901135|sp|Q12004.1|TFB4_YEAST (RecName: Full=RNA polymerase II transcription factor B subunit 4; AltName: Full=General transcription and DNA repair factor IIH subunit TFB4; Short=TFIIH subunit TFB4; AltName: Full=RNA polymerase II transcription factor B 34 kDa subunit; AltName: Full=RNA polymerase II transcription factor B p34 subunit)

HSP 1 Score: 77.0258 bits (188), Expect = 1.926e-15
Identity = 62/269 (23.05%), Postives = 112/269 (41.64%), Query Frame = 0 
Query:   17 LLIIVMDMNPNQKLFL------HXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDP----AADNEIRQ-----LDGQYELFTLVETTVRSKFIELLQSEAGISSQTD--SPLSGSLAMALSYINRRRKENM--DLSARIL------------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
            LL +++++ P  KL+       +   ++  VL+ L+ F NAHL  + +N +A + + + G  +LYP          ++N+ R          Y  F  V+ T+  +  +L + E     Q    S L+G+++  L+Y+NR  KE++   L +R+L                                                Q  D T G+Y +V     L+Q+L         +RP +  P+   VDFR +C+   ++V +GF+CS+
Sbjct:   25 LLTVIIEIAP--KLWTTFDEEGNEKGSIIKVLEALIVFLNAHLAFNSANKVAVIAAYSQGIKYLYPESTSALKASESENKTRSDLKIINSDMYRRFRNVDETLVEEIYKLFELEKKQIEQNSQRSTLAGAMSAGLTYVNRISKESVTTSLKSRLLVLTCGSGSSKDEIFQYIPIMNCIFSATKMKCPIDVVKIGGSKESTFLQQTTDATNGVYLHVESTEGLIQYLATAMFIDPSLRPIIVKPNHGSVDFRTSCYLTGRVVAVGFICSV 291
[Close]
BLAST of EMLSAG00000000259 vs. Select Arthropod Genomes
Match: EAA12181.5 (AGAP008522-PA, partial [Anopheles gambiae str. PEST])

HSP 1 Score: 190.274 bits (482), Expect = 2.414e-59
Identity = 99/252 (39.29%), Postives = 139/252 (55.16%), Query Frame = 0 
Query:   12 DSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSY---INRRRKENMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
            +  A LL+IV+D NP+Q++    P  LT  LD+++ FANAHLM    N LA L      + FLYP P  P    +IRQ+DGQYE+FTLVE T++ K   ++ +   +++ T+S L+GS++MAL Y   INR +     +++R+L                                          QG DITGG Y  +      LQ+LLW+FLP  +MR +L LP   KVD+RAACFCHR+L+DIG+VCS+
Sbjct:    4 NKDASLLVIVLDTNPSQRIIREKPHNLTQCLDSIVAFANAHLMQKAQNKLAVLACHHHATQFLYPTPGKPL---DIRQVDGQYEVFTLVEKTIKQKLAHMINTAPPLTTPTESLLAGSMSMALCYIARINRNKAPGSKINSRVLVVTGSNECASQYMTYMNVFFTAQKQGVVVDVCALDKALSLLQQGCDITGGQYLRLEQLEGFLQYLLWVFLPDPQMRCKLVLPPPVKVDYRAACFCHRELIDIGYVCSV 252
[Close]
BLAST of EMLSAG00000000259 vs. Select Arthropod Genomes
Match: XP_016768486.1 (PREDICTED: general transcription factor IIH subunit 3 isoform X2 [Apis mellifera])

HSP 1 Score: 173.326 bits (438), Expect = 1.111e-52
Identity = 101/254 (39.76%), Postives = 135/254 (53.15%), Query Frame = 0 
Query:   14 KAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQT----DSPLSGSLAMALSYINRRRKENM---DLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
            +  LLII++D+NP Q++       LT  LD+ + FANAHLM   +N LA +   + G+ FLYP  D      EIRQ+DGQYE FT++E TVR +  +++     I+S      +S +SG+L MAL YI R  +E +    L +RIL                                          QG DITGG Y  VP    LLQ+LLWIFLP   +R +L  P   KVD+RAACFCH++L+DIG+VCSI
Sbjct:    4 ETSLLIIILDVNPVQRIIKQETRILTQCLDSTIVFANAHLMQSSNNQLAVIACHSHGAKFLYPCEDAL----EIRQIDGQYEKFTMIELTVRQQLQKVINE---ITSNKILNGESLISGALTMALCYIARLEREKIAGEKLYSRILVITASNDSATQYMNYMNIFFTAQKMGVILDVCSLDQELTLLQQGCDITGGNYLKVPQLNGLLQYLLWIFLPDPNVRSKLVFPPPVKVDYRAACFCHQELIDIGYVCSI 250
[Close]
BLAST of EMLSAG00000000259 vs. Select Arthropod Genomes
Match: gb|KYB25378.1| (General transcription factor IIH subunit 3-like protein [Tribolium castaneum])

HSP 1 Score: 173.326 bits (438), Expect = 1.268e-52
Identity = 98/251 (39.04%), Postives = 140/251 (55.78%), Query Frame = 0 
Query:   13 SKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSY---INRRRKENMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
            S+  LL++++D NP+QK+    P  LT  +D+++ FAN+HLM    N LA +   +  S F+YP P+ P    ++RQ+DGQYE+FT VE T++    +LL +E   +  T+S L+G++AMAL Y   I R +     L++RIL                                          QG DITGG+Y  VP    LLQ+LLW+FLP   +R +L LP   KVD+RAACFCHR+L+DIG+VCS+
Sbjct:   18 SETSLLVVIVDSNPSQKMLRDNPHVLTHCIDSVIAFANSHLMQKAQNKLAVMACHSKTSEFIYPGPNKPL---DVRQIDGQYEVFTAVEKTIKQNLAKLLATEKS-TLVTESLLAGAIAMALCYIARIQRTKPPGCVLNSRILVVTGSGDSASQYMNYMNVFFTAQKQGIVIDVCALDQHLSLLQQGCDITGGLYLKVPQLQGLLQYLLWVFLPEPPIRQKLVLPPPVKVDYRAACFCHRELIDIGYVCSV 264
[Close]
BLAST of EMLSAG00000000259 vs. Select Arthropod Genomes
Match: XP_394705.3 (PREDICTED: general transcription factor IIH subunit 3 isoform X1 [Apis mellifera])

HSP 1 Score: 173.326 bits (438), Expect = 1.294e-52
Identity = 101/258 (39.15%), Postives = 136/258 (52.71%), Query Frame = 0 
Query:   10 GGDSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQT----DSPLSGSLAMALSYINRRRKENM---DLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
              + +  LLII++D+NP Q++       LT  LD+ + FANAHLM   +N LA +   + G+ FLYP  D      EIRQ+DGQYE FT++E TVR +  +++     I+S      +S +SG+L MAL YI R  +E +    L +RIL                                          QG DITGG Y  VP    LLQ+LLWIFLP   +R +L  P   KVD+RAACFCH++L+DIG+VCSI
Sbjct:    2 SNEIETSLLIIILDVNPVQRIIKQETRILTQCLDSTIVFANAHLMQSSNNQLAVIACHSHGAKFLYPCEDAL----EIRQIDGQYEKFTMIELTVRQQLQKVINE---ITSNKILNGESLISGALTMALCYIARLEREKIAGEKLYSRILVITASNDSATQYMNYMNIFFTAQKMGVILDVCSLDQELTLLQQGCDITGGNYLKVPQLNGLLQYLLWIFLPDPNVRSKLVFPPPVKVDYRAACFCHQELIDIGYVCSI 252
[Close]
BLAST of EMLSAG00000000259 vs. Select Arthropod Genomes
Match: AAF51411.2 (transcription factor B4 [Drosophila melanogaster])

HSP 1 Score: 171.4 bits (433), Expect = 9.178e-52
Identity = 94/263 (35.74%), Postives = 137/263 (52.09%), Query Frame = 0 
Query:    1 MSPSESTGSGGDSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRKE---NMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
            M   ++     +S   LL+IV+D NP+Q      P  LT +L+ ++ F NAHLM    N LA +      + FLYP P       E+RQ+DGQYE F LVE TV+ +   +L +   +S+  +S L+GS++MAL YI+R ++     + + +RIL                                          QG DIT G +  V     LLQ+LLW+FLP+ ++R +L LP   KVD+RA+CFCHR+L+DIG+VCS+
Sbjct:    1 MEADQAASKEAESCIDLLVIVLDTNPSQHFVRQNPQNLTQILEAVIAFGNAHLMQKAQNKLAVVSCSHHATNFLYPLPRRQV---ELRQVDGQYEAFNLVEKTVKQQLGSILMNAPRLSAPCESLLAGSMSMALCYISRLQRNLAPGVKMHSRILVVTGSNECASQYMTFMNVFFTAQKLGITIDTCALDKTLSLLQQGCDITSGQFLKVTQLDGLLQYLLWVFLPAPQIRHKLVLPPPPKVDYRASCFCHRELIDIGYVCSV 260
[Close]
BLAST of EMLSAG00000000259 vs. Select Arthropod Genomes
Match: EFX81722.1 (hypothetical protein DAPPUDRAFT_224195 [Daphnia pulex])

HSP 1 Score: 135.576 bits (340), Expect = 6.513e-38
Identity = 83/254 (32.68%), Postives = 124/254 (48.82%), Query Frame = 0 
Query:   17 LLIIVMDMNPNQK-----LFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEA--GISSQTDSPLSGSLAMALSYINRRRKE---NMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
            L+ IV+D  P +K     +  +  T +  + D L+ F NAHLM    N LA +   +  + FLYP  +  +     R   GQY++F  V++ +R    EL+  ++    S+ +DS L G++A AL +I++ ++E   +  L  RIL                                          QG DITGG Y  +P    LL++LLW+FLP    R ++ LP   KVD+RAACFCH +LVDIG+VCS+
Sbjct:   12 LVAIVIDATPAKKFASQAIIDNGSTMMNRIFDALIGFGNAHLMQGSHNKLAVIACNSKSTKFLYPSENGDSKSYHNRP--GQYDMFAKVDSDIRHGLSELILKDSIDHDSTTSDSLLGGAMARALCHIHKIQRELSLSHQLKPRILVVSGSSDSALQYMTFMNVFFTAQKENVVIDCCMMDSDSGLLQQGCDITGGQYLRIPTVVGLLEYLLWVFLPGPSCRSKIVLPPPTKVDYRAACFCHHKLVDIGWVCSV 263
[Close]
BLAST of EMLSAG00000000259 vs. Select Arthropod Genomes
Match: gb|KFM79973.1| (General transcription factor IIH subunit 3, partial [Stegodyphus mimosarum])

HSP 1 Score: 102.449 bits (254), Expect = 6.082e-27
Identity = 44/71 (61.97%), Postives = 55/71 (77.46%), Query Frame = 0 
Query:  148 SARILQGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
            S  + QG DITGGMY  V + AALLQ+LLW+FLP A+ R Q+ LPS   VD+RAACFCHR L++IG+VCS+
Sbjct:   48 SGLLQQGCDITGGMYLKVQNVAALLQYLLWVFLPGAQTRKQMILPSRVHVDYRAACFCHRNLIEIGYVCSV 118
[Close]
BLAST of EMLSAG00000000259 vs. Select Arthropod Genomes
Match: gb|EEC10143.1| (RNA polymerase II transcription initiation factor, putative, partial [Ixodes scapularis])

HSP 1 Score: 102.064 bits (253), Expect = 2.899e-25
Identity = 65/204 (31.86%), Postives = 97/204 (47.55%), Query Frame = 0 
Query:   12 DSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRKENM---DLSARIL------------------------------------------QGADITGGMYFNVPDNAA 170
            + +  LL+ ++D NP   L       ++ +LD L  F N+HLML+P N LA + S +  S F+YP P + ++D     +DGQYELFT V   ++    EL+ S+   S+  +S L+G L++AL YINR  KE+     +++RIL                                          QG DITGG Y  VP++A 
Sbjct:    3 EDEGSLLVAIIDTNPCASLLESDQGIVSKLLDALSVFCNSHLMLNPCNKLAIIASHSHKSTFIYPKPQESSSDT--YSVDGQYELFTEVTGAIKDGVKELVLSDDSESAAGESLLTGGLSLALCYINRIEKESSSQNKIASRILVLSASGESASQYLNFMNVFFTAQKKNVIIDACVLEKDSGLLQQGCDITGGKYMKVPNHAG 204
[Close]
BLAST of EMLSAG00000000259 vs. Select Arthropod Genomes
Match: gb|KFM79972.1| (General transcription factor IIH subunit 3, partial [Stegodyphus mimosarum])

HSP 1 Score: 78.1814 bits (191), Expect = 8.341e-18
Identity = 43/120 (35.83%), Postives = 68/120 (56.67%), Query Frame = 0 
Query:   12 DSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNE-IRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSL 130
            D    L+++V+D+NP+ ++       +   LD ++ F N+HLML P N LA +G     S FLYP P  P++D E IR  DGQYELF+ V+  V +    L+   +     T+S ++G++
Sbjct:    6 DEDGSLVVVVIDLNPSPQMIKDGECIIPRSLDAIISFCNSHLMLSPLNKLAIIGCHTRQSCFLYPLP--PSSDVEDIRPADGQYELFSCVKNAVHTNVKNLILQSSQDEIYTESLIAGAM 123
[Close]
BLAST of EMLSAG00000000259 vs. nr
Match: gi|225712364|gb|ACO12028.1| (General transcription factor IIH subunit 3 [Lepeophtheirus salmonis] >gi|290562788|gb|ADD38789.1| General transcription factor IIH subunit 3 [Lepeophtheirus salmonis])

HSP 1 Score: 426.017 bits (1094), Expect = 2.958e-149
Identity = 216/260 (83.08%), Postives = 217/260 (83.46%), Query Frame = 0 
Query:    1 MSPSESTGSGGDSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRKENMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
            MSPSESTGSGGDSKAQLLIIVMDMNPNQKLFLH PTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRKENMDLSARIL                                          QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCS+
Sbjct:    1 MSPSESTGSGGDSKAQLLIIVMDMNPNQKLFLHDPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRKENMDLSARILVITASGDTASQYMNYMNVFFTAQKLDVLLDTCMLQIDSPLLQQGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSV 260
[Close]
BLAST of EMLSAG00000000259 vs. nr
Match: gi|225717796|gb|ACO14744.1| (General transcription factor IIH subunit 3 [Caligus clemensi])

HSP 1 Score: 300.442 bits (768), Expect = 8.574e-100
Identity = 156/251 (62.15%), Postives = 180/251 (71.71%), Query Frame = 0 
Query:   10 GGDSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRKENMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
            GG+  AQLLI+VMDMNPNQ+L L  PT LTSVLD+LLCF+NAHL+LHPSNALA +GS++SGSYFLYP         E+RQLDGQYELFTLVET+VR+KF +LL++E   S   DSPLSGSLAMAL+YINR+RKE+ +L ARIL                                          QGADITGG+YFNVPD AALLQFLLWIFLPSAE+RPQLGLP+  KVDFRAACFCHRQLV +GFVCS+
Sbjct:   12 GGE--AQLLILVMDMNPNQRLLLEEPTRLTSVLDSLLCFSNAHLLLHPSNALAAIGSLSSGSYFLYPSSCIDDTSPELRQLDGQYELFTLVETSVRNKFSQLLEAET--SGSEDSPLSGSLAMALAYINRKRKESPELRARILILTASGDTASQYMNYMNVFFTAQKLNVLLDACMLQSDSPLLQQGADITGGLYFNVPDLAALLQFLLWIFLPSAEIRPQLGLPTGVKVDFRAACFCHRQLVGVGFVCSV 258
[Close]
BLAST of EMLSAG00000000259 vs. nr
Match: gi|1121090506|ref|XP_019535831.1| (PREDICTED: general transcription factor IIH subunit 3-like [Aedes albopictus] >gi|1121162220|ref|XP_019526668.1| PREDICTED: general transcription factor IIH subunit 3-like [Aedes albopictus] >gi|1000206479|gb|KXJ77389.1| hypothetical protein RP20_CCG007693 [Aedes albopictus])

HSP 1 Score: 190.66 bits (483), Expect = 7.331e-57
Identity = 103/252 (40.87%), Postives = 137/252 (54.37%), Query Frame = 0 
Query:   12 DSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYI---NRRRKENMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
            +  A LL+IVMD NP+Q++    P  LT  LD+++ FANAHLM    N LA L      + FLYP P  P    +IRQ+DGQYE FTLVE T++ K  +++     +S  T+S L+GS+AMAL YI   NR +   + +++RIL                                          QG DITGG Y  +P     LQ+LLW+FLP    R +L LP   KVD+RAACFCHR+L+DIG+VCS+
Sbjct:    4 NKDASLLVIVMDTNPSQRIIRENPHHLTQCLDSIVAFANAHLMQKAQNKLAVLACHHHATEFLYPTPGKPL---DIRQVDGQYEAFTLVEKTIKQKLAKVIGEAPRLSVPTESLLAGSMAMALCYIARVNRNKPAGVKINSRILVVTGSNECASQYMTYMNVFFTAQKQNVTLDVCALDKPLSLLQQGCDITGGQYLKLPQLDGFLQYLLWVFLPEPLTRCKLVLPPPVKVDYRAACFCHRELIDIGYVCSV 252
[Close]
BLAST of EMLSAG00000000259 vs. nr
Match: gi|158296528|ref|XP_316918.4| (AGAP008522-PA [Anopheles gambiae str. PEST] >gi|157014753|gb|EAA12181.5| AGAP008522-PA [Anopheles gambiae str. PEST])

HSP 1 Score: 190.274 bits (482), Expect = 1.181e-56
Identity = 99/252 (39.29%), Postives = 139/252 (55.16%), Query Frame = 0 
Query:   12 DSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSY---INRRRKENMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
            +  A LL+IV+D NP+Q++    P  LT  LD+++ FANAHLM    N LA L      + FLYP P  P    +IRQ+DGQYE+FTLVE T++ K   ++ +   +++ T+S L+GS++MAL Y   INR +     +++R+L                                          QG DITGG Y  +      LQ+LLW+FLP  +MR +L LP   KVD+RAACFCHR+L+DIG+VCS+
Sbjct:    4 NKDASLLVIVLDTNPSQRIIREKPHNLTQCLDSIVAFANAHLMQKAQNKLAVLACHHHATQFLYPTPGKPL---DIRQVDGQYEVFTLVEKTIKQKLAHMINTAPPLTTPTESLLAGSMSMALCYIARINRNKAPGSKINSRVLVVTGSNECASQYMTYMNVFFTAQKQGVVVDVCALDKALSLLQQGCDITGGQYLRLEQLEGFLQYLLWVFLPDPQMRCKLVLPPPVKVDYRAACFCHRELIDIGYVCSV 252
[Close]
BLAST of EMLSAG00000000259 vs. nr
Match: gi|1134464134|gb|JAV21604.1| (putative transcription factor tfb4 [Culex tarsalis])

HSP 1 Score: 189.889 bits (481), Expect = 1.652e-56
Identity = 101/252 (40.08%), Postives = 139/252 (55.16%), Query Frame = 0 
Query:   12 DSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSY---INRRRKENMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
            ++   LL+IV+D NP+Q++    P  LT  LD+++ FANAHLM    N LA L      + FLYP P  P    +IRQ+DGQYE FTLVE T++ K   ++     +++ T+S L+GS+AMAL Y   INR +   + +++RIL                                          QG DITGG Y  +P     LQ+LLW+FLP  +MR +L LP   KVD+RAACFCHR+L+DIG+VCS+
Sbjct:    4 NNDTSLLVIVLDTNPSQRIIRDNPHHLTQCLDSIVGFANAHLMQKAQNKLAVLACHHHATEFLYPNPGKPL---DIRQVDGQYEQFTLVEKTIKQKLARMINEAPRLAAPTESLLAGSMAMALCYIARINRNKPAGVKINSRILVVTGSNECASQYMTYMNVFFTAQKQNVTLDVCALDKPLSLLQQGCDITGGQYLKLPQLDGFLQYLLWVFLPDPQMRCKLVLPPPVKVDYRAACFCHRELIDIGYVCSV 252
[Close]
BLAST of EMLSAG00000000259 vs. nr
Match: gi|157132766|ref|XP_001662634.1| (AAEL012523-PA [Aedes aegypti] >gi|108871079|gb|EAT35304.1| AAEL012523-PA [Aedes aegypti])

HSP 1 Score: 189.119 bits (479), Expect = 3.931e-56
Identity = 101/252 (40.08%), Postives = 137/252 (54.37%), Query Frame = 0 
Query:   12 DSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYI---NRRRKENMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
            +  A LL+IVMD NP+Q++    P  LT  LD+++ FANAHLM    N LA L      + FLYP P  P    +IRQ+DGQYE FTLVE T++ K  +++     ++  T+S L+GS+AMAL YI   +R +   + +++RIL                                          QG DITGG Y  +P     LQ+LLW+FLP    R +L LP   KVD+RAACFCHR+L+DIG+VCS+
Sbjct:    4 NKDASLLVIVMDTNPSQRIIRENPHHLTQCLDSIVAFANAHLMQKAQNKLAVLACHHHATEFLYPTPGKPL---DIRQVDGQYEAFTLVEKTIKQKLAKVISEAPRLTVPTESLLAGSMAMALCYIARVHRNKPAGVKINSRILVVTGSNECASQYMTYMNVFFTAQKQNVSLDVCALDKPLSLLQQGCDITGGQYLKLPQLDGFLQYLLWVFLPEPLTRCKLVLPPPVKVDYRAACFCHRELIDIGYVCSV 252
[Close]
BLAST of EMLSAG00000000259 vs. nr
Match: gi|1108470734|emb|CRL01457.1| (CLUMA_CG014347, isoform A [Clunio marinus])

HSP 1 Score: 188.734 bits (478), Expect = 4.882e-56
Identity = 99/247 (40.08%), Postives = 135/247 (54.66%), Query Frame = 0 
Query:   17 LLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRKEN---MDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
            LL+I +D NP+Q +    P  LT++L+++  F N+HLM  P N LA +G     S FLYP  D      E+RQ+DGQYE FTLVE ++++   +++ +   ++S  +S L+G LAMAL YI R +K      +L+ RIL                                          QG DITGG Y  VP    LL++LLWIFLP   +R +L LP   KVD+RAACFCHR+L+DIGFVCS+
Sbjct:   11 LLVIALDTNPSQSILKRKPNLLTNILNSISAFGNSHLMQKPQNKLAVIGCHHHTSKFLYPSTDKSL---EVRQIDGQYEYFTLVEKSIKTNLADMITNAPKVASNNESMLAGCLAMALCYITRIKKSQPPGCNLNTRILVITGSEDSAHQYMTYMNVFFTAQKEKVVIDICALDNTLVLLQQGCDITGGQYLKVPQIEGLLEYLLWIFLPDPAIRSKLALPPPVKVDYRAACFCHRELIDIGFVCSV 254
[Close]
BLAST of EMLSAG00000000259 vs. nr
Match: gi|357624804|gb|EHJ75440.1| (putative transcription factor TFIIH-subunit [Danaus plexippus])

HSP 1 Score: 188.734 bits (478), Expect = 5.494e-56
Identity = 98/251 (39.04%), Postives = 138/251 (54.98%), Query Frame = 0 
Query:   13 SKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRKEN---MDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
            S + LL+I++D NPNQ+     P  LT  LD ++ FAN+HLM    N LA +G     S +LYP P  P    ++RQ+DGQYELFTLVE T++ + + L++S+       +S L+G++AM L +I R R+E    + + +R+L                                          QG DITGG+Y  VP    LLQ+LLW+FLP A  R +L LP   +VD+RAACFCHR+L+ IG+VCS+
Sbjct:    8 SDSSLLVIIVDTNPNQRYITEDPKVLTGCLDAVIAFANSHLMQKSRNQLAVIGCHFHKSEYLYPSPGKPL---DVRQIDGQYELFTLVEKTIKMRLVNLIKSQPQEERPGESLLAGAMAMGLCFIARMRREQPPGLRMVSRMLVVTGSSDTAAQYINYMNVFFTAQKQQVLLDVCSLDKHLSLLQQGCDITGGLYLKVPSLEGLLQYLLWVFLPEASERRELVLPGRGRVDYRAACFCHRELLTIGYVCSV 255
[Close]
BLAST of EMLSAG00000000259 vs. nr
Match: gi|546681611|gb|ERL91675.1| (hypothetical protein D910_09003 [Dendroctonus ponderosae])

HSP 1 Score: 187.578 bits (475), Expect = 1.685e-55
Identity = 101/247 (40.89%), Postives = 139/247 (56.28%), Query Frame = 0 
Query:   17 LLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSYINRRRKEN---MDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
            LL++++D NP QK+       LT+++D+++ F+N+HLM    N LA +   +  S F+YP    P    ++RQ+DGQYE F LVE TV+    ELL SE+  ++ T+S L+G++AMAL YI R ++       L++RIL                                          QG DITGGMY  VP   ALLQFLLW+FLP   +R +L LP   KVD+RAACFCHR+L+DIGFVCS+
Sbjct:   22 LLVVILDTNPTQKMLRDKQNQLTNIVDSVVAFSNSHLMQKAQNKLAVMACHSKTSQFIYPGAKKPL---DVRQVDGQYEAFLLVEKTVKQNLAELLASESS-TAVTESLLAGAIAMALCYIARLQRTKPPGSKLNSRILVVSGSGDSASQYMNYMNVFFTAQKLNVVLDVCALDQHLSLLQQGCDITGGMYLKVPQITALLQFLLWVFLPEPPIREKLVLPPPVKVDYRAACFCHRELIDIGFVCSV 264
[Close]
BLAST of EMLSAG00000000259 vs. nr
Match: gi|170028289|ref|XP_001842028.1| (TFIIH basal transcription factor complex p34 subunit [Culex quinquefasciatus] >gi|167874183|gb|EDS37566.1| TFIIH basal transcription factor complex p34 subunit [Culex quinquefasciatus])

HSP 1 Score: 187.193 bits (474), Expect = 2.073e-55
Identity = 102/256 (39.84%), Postives = 139/256 (54.30%), Query Frame = 0 
Query:   12 DSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISSQTDSPLSGSLAMALSY---INRRRKENMDLSARIL------------------------------------------QGADITGGMYFNVPDNAALLQFLLWIFLPSAEMRPQ----LGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
            ++   LL+IV+D NP+Q++    P  LT  LD+++ FANAHLM    N LA L      + FLYP P  P    +IRQ+DGQYE FTLVE T++ K   ++     +++ T+S L+GS+AMAL Y   INR +   + +++RIL                                          QG DITGG Y  +P     LQ+LLW+FLP  +M PQ    L LP   KVD+RAACFCHR+L+DIG+VCS+
Sbjct:    4 NNDTSLLVIVLDTNPSQRIIRENPHHLTQCLDSIVGFANAHLMQKAHNKLAVLACHHHATEFLYPNPGKPL---DIRQVDGQYEQFTLVEKTIKQKLARMINEAPRLAAPTESLLAGSMAMALCYIARINRNKPAGVKINSRILVVTGSNECASQYMTYMNVFFTAQKQNVTLDVCALDKPLSLLQQGCDITGGQYLKLPQLDGFLQYLLWVFLPDPQMHPQMRCKLVLPPPVKVDYRAACFCHRELIDIGYVCSV 256
[Close]
BLAST of EMLSAG00000000259 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold297_size217559-snap-gene-0.27 (protein:Tk11578 transcript:maker-scaffold297_size217559-snap-gene-0.27-mRNA-1 annotation:"general transcription factor iih subunit 3")

HSP 1 Score: 196.052 bits (497), Expect = 2.272e-62
Identity = 108/260 (41.54%), Postives = 146/260 (56.15%), Query Frame = 0 
Query:    8 GSGGDSKAQLLIIVMDMNPNQKLFLHXPTALTSVLDNLLCFANAHLMLHPSNALATLGSMASGSYFLYPPPDDPAADNEIRQLDGQYELFTLVETTVRSKFIELLQSEAGISS--QTDSPLSGSLAMALSYINRRRKE---NMDLSARIL------------------------------------------QGADITGGMYFNVPDNA--ALLQFLLWIFLPSAEMRPQLGLPSANKVDFRAACFCHRQLVDIGFVCSI 218
            G   + + QLL++V+DMNPNQ  F   P +L   LD+ +  AN+HLMLHP+NA+A + S +    FLYP   D    + +RQ DGQ+E F  VE T+R +   +L++E   ++    +S LSG+L+MALSYI+RRR+E      L++R+L                                          QGADITGG+Y  V      ALLQFL WIFLP   +R  L LPS ++VD+RAACFCHR L+DIGFVCS+
Sbjct:   17 GVLAEPQGQLLVLVLDMNPNQVFFTKQPESLFHWLDSAISLANSHLMLHPNNAIAAIASHSQSCSFLYPSQTDQDESDNLRQRDGQFEGFYQVEATIRKQAAHILRAETQPTAPVHAESLLSGALSMALSYIHRRRQELSVAESLTSRVLVMSASGDTATQYMNYMNVFFSAQKMGVVIDTCMLEKDAGLLQQGADITGGVYRKVDSRHFPALLQFLTWIFLPDTRLREALSLPSMDRVDYRAACFCHRNLIDIGFVCSV 276
The following BLAST results are available for this feature:
BLAST of EMLSAG00000000259 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 25
Match NameE-valueIdentityDescription
-1.159e-1654.55symbol:AN0138 species:162425 "Aspergillus nidulans... [more]
-2.298e-1653.03symbol:An18g03180 "Putative uncharacterized protei... [more]
-2.367e-1653.03symbol:ASPNIDRAFT_42792 "Putative uncharacterized ... [more]
-2.367e-1653.03symbol:An18g03180 species:5061 "Aspergillus niger"... [more]
-2.767e-1653.03symbol:AFUA_5G11580 "Transcription factor TFIIH su... [more]

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BLAST of EMLSAG00000000259 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 2
Match NameE-valueIdentityDescription
gi|592796352|gb|GAXK01158216.1|5.961e-5138.00TSA: Calanus finmarchicus comp66659_c2_seq1 transc... [more]
gi|592935676|gb|GAXK01022877.1|5.689e+028.36TSA: Calanus finmarchicus comp946102_c0_seq1 trans... [more]
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BLAST of EMLSAG00000000259 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000002591.280e-161100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s103:10152... [more]
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BLAST of EMLSAG00000000259 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
gi|50403772|sp|Q13889.2|TF2H3_HUMAN7.126e-4133.08RecName: Full=General transcription factor IIH sub... [more]
gi|81888006|sp|Q561R7.1|TF2H3_RAT5.150e-4032.22RecName: Full=General transcription factor IIH sub... [more]
gi|122131719|sp|Q05B56.1|TF2H3_BOVIN1.111e-3932.21RecName: Full=General transcription factor IIH sub... [more]
gi|22654149|sp|Q8VD76.1|TF2H3_MOUSE4.540e-3931.48RecName: Full=General transcription factor IIH sub... [more]
gi|62901129|sp|O74366.1|TFB4_SCHPO1.248e-3231.30RecName: Full=RNA polymerase II transcription fact... [more]
gi|62901295|sp|Q6CD24.1|TFB4_YARLI1.771e-2326.35RecName: Full=RNA polymerase II transcription fact... [more]
gi|62901307|sp|Q6FWA7.1|TFB4_CANGA1.889e-1825.00RecName: Full=RNA polymerase II transcription fact... [more]
gi|62901344|sp|Q75B93.1|TFB4_ASHGO5.344e-1824.81RecName: Full=RNA polymerase II transcription fact... [more]
gi|62901298|sp|Q6CVX9.1|TFB4_KLULA1.089e-1524.79RecName: Full=RNA polymerase II transcription fact... [more]
gi|62901135|sp|Q12004.1|TFB4_YEAST1.926e-1523.05RecName: Full=RNA polymerase II transcription fact... [more]

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BLAST of EMLSAG00000000259 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 9
Match NameE-valueIdentityDescription
EAA12181.52.414e-5939.29AGAP008522-PA, partial [Anopheles gambiae str. PES... [more]
XP_016768486.11.111e-5239.76PREDICTED: general transcription factor IIH subuni... [more]
gb|KYB25378.1|1.268e-5239.04General transcription factor IIH subunit 3-like pr... [more]
XP_394705.31.294e-5239.15PREDICTED: general transcription factor IIH subuni... [more]
AAF51411.29.178e-5235.74transcription factor B4 [Drosophila melanogaster][more]
EFX81722.16.513e-3832.68hypothetical protein DAPPUDRAFT_224195 [Daphnia pu... [more]
gb|KFM79973.1|6.082e-2761.97General transcription factor IIH subunit 3, partia... [more]
gb|EEC10143.1|2.899e-2531.86RNA polymerase II transcription initiation factor,... [more]
gb|KFM79972.1|8.341e-1835.83General transcription factor IIH subunit 3, partia... [more]
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BLAST of EMLSAG00000000259 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25
Match NameE-valueIdentityDescription
gi|225712364|gb|ACO12028.1|2.958e-14983.08General transcription factor IIH subunit 3 [Lepeop... [more]
gi|225717796|gb|ACO14744.1|8.574e-10062.15General transcription factor IIH subunit 3 [Caligu... [more]
gi|1121090506|ref|XP_019535831.1|7.331e-5740.87PREDICTED: general transcription factor IIH subuni... [more]
gi|158296528|ref|XP_316918.4|1.181e-5639.29AGAP008522-PA [Anopheles gambiae str. PEST] >gi|15... [more]
gi|1134464134|gb|JAV21604.1|1.652e-5640.08putative transcription factor tfb4 [Culex tarsalis... [more]
gi|157132766|ref|XP_001662634.1|3.931e-5640.08AAEL012523-PA [Aedes aegypti] >gi|108871079|gb|EAT... [more]
gi|1108470734|emb|CRL01457.1|4.882e-5640.08CLUMA_CG014347, isoform A [Clunio marinus][more]
gi|357624804|gb|EHJ75440.1|5.494e-5639.04putative transcription factor TFIIH-subunit [Danau... [more]
gi|546681611|gb|ERL91675.1|1.685e-5540.89hypothetical protein D910_09003 [Dendroctonus pond... [more]
gi|170028289|ref|XP_001842028.1|2.073e-5539.84TFIIH basal transcription factor complex p34 subun... [more]

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BLAST of EMLSAG00000000259 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 1
Match NameE-valueIdentityDescription
maker-scaffold297_size217559-snap-gene-0.272.272e-6241.54protein:Tk11578 transcript:maker-scaffold297_size2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s103supercontigLSalAtl2s103:1015218..1016337 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionsnap_masked-LSalAtl2s103-processed-gene-10.11
Biotypeprotein_coding
EvidenceIEA
NoteGeneral transcription factor IIH subunit 3 [Lepeophtheirus salmonis]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000000259 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000000259EMLSAT00000000259-696106Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s103:1015218..1016337+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000000259-683025 ID=EMLSAG00000000259-683025|Name=EMLSAG00000000259|organism=Lepeophtheirus salmonis|type=gene|length=1120bp|location=Sequence derived from alignment at LSalAtl2s103:1015218..1016337+ (Lepeophtheirus salmonis)
ATGAGTCCATCAGAGTCCACGGGAAGCGGAGGAGACAGCAAAGCTCAACT
CCTCATTATCGTCATGGATATGAATCCAAACCAGAAGCTATTCCTCCACM
ATCCAACCGCCCTAACCTCTGTTCTGGACAATCTTCTCTGCTTCGCAAAT
GCACATCTCATGCTTCACCCGAGCAACGCACTAGCCACCCTTGGAAGCAT
GGCCTCCGGATCCTATTTCCTCTATCCKCCTCCGGATGATCCAGCAGCAG
ATAACGAAATACGACAGTTGGACGGACAATATGAGTTATTCACTCTTGTG
GAAACAACGGTTCGCTCAAAGTTCATTGAGCTTCTCCAGTCTGAAGCGGG
CATCTCCTCTCAAACAGATTCCCCACTCTCTGGATCCCTTGCCATGGCCC
TCTCATACATAAATCGCCGCAGAAAAGAAAATATGGATTTAAGCGCACGG
ATCCTGGTTATAACGGCTTRAGGGGACACGGCATCACAGMATATGAACTA
CATGAATGTGTTTTTTACTGCTCAAAAATTGGATGTCCTACTCGATACCT
GCATGCTTCAAATCGATTCTCCACTCTTACAGCAAGGAGCGGATATAACT
GGGGGCATGTATTTCAATGTTCCAGATAACGCGGCCTTGCTTCAATTCCT
TCTTTGGATCTTTCTGCCCTCTGCAGAAATGCGTCCACAACTGGGACTTC
CATCTGCTAACAAAGTTGACTTTAGGGCTGCTTGCTTCTGTCATCGTCAA
CTTGTGGATATTGGCTTTGTGTGCTCCGTTTGTTTATCCATCTTTTGTAA
ATTTAGTCCGATTTGCACTACATGCCAAACTATTTTCCGTGTTCCCCCAC
CTTTAATGGGAGSKAAAAGAAAAAAAGTCACGCACACGGTTCGTCGTCTG
TTTTAAAGAGAAAATAATCTGTTCAGTAGTACCTATTTTGTATTCTACAC
CGCATTTGGGGTATGAAGGAGACGGCGGAGAGAAGAATCAGGGAGTAAAT
TGATATGTTTTGGCTGGGCCTTCAAATCCCTGCATTTTTAAACAATGGAA
ATGGGATAGAAAAGTGAAATACATATATATATATGATATCTTAAGTTCAA
TATTTTTATAGATCAAATAA
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