EMLSAG00000000402, EMLSAG00000000402-683168 (gene) Lepeophtheirus salmonis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000402 vs. GO
Match: - (symbol:SNRPB "Small nuclear ribonucleoprotein-associated protein B'" species:9315 "Macropus eugenii" [GO:0000387 "spliceosomal snRNP assembly" evidence=ISS] [GO:0005683 "U7 snRNP" evidence=ISS] [GO:0005685 "U1 snRNP" evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034709 "methylosome" evidence=ISS] [GO:0034719 "SMN-Sm protein complex" evidence=ISS] INTERPRO:IPR001163 GO:GO:0005829 GO:GO:0005681 GO:GO:0003723 GO:GO:0034709 GO:GO:0000387 InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0034719 GO:GO:0005687 Pfam:PF01423 GO:GO:0005685 InterPro:IPR006649 SMART:SM00651 GO:GO:0005683 HOGENOM:HOG000188899 HOVERGEN:HBG001019 InterPro:IPR017131 PIRSF:PIRSF037187 GeneTree:ENSGT00670000098029 OrthoDB:EOG7J70HT EMBL:AF176323 ProteinModelPortal:Q9N1Q0 SMR:Q9N1Q0 PRIDE:Q9N1Q0 Uniprot:Q9N1Q0) HSP 1 Score: 167.933 bits (424), Expect = 2.947e-50 Identity = 95/136 (69.85%), Postives = 105/136 (77.21%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLPGA--GPGIGRAAGXGMIPPGGPGGPAP-GLAGPVRGXGGPXPQMMXPGG 133
MR ILQD R FIGTFKAFDKHMNLI+ DC+EFRK++PKN + EREEKRVLGLVLLRGEN+VSMTVEGPPP + G+ RVPL GA GPGIGRAAG G +P G P AP GLAGPVRG GGP Q+M P G
Sbjct: 17 MRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQA-----EREEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLSGAAGGPGIGRAAGRG-VPAGVPMPQAPAGLAGPVRGVGGPSQQVMTPQG 146
BLAST of EMLSAG00000000402 vs. GO
Match: - (symbol:SmB "Small ribonucleoprotein particle protein SmB" species:7227 "Drosophila melanogaster" [GO:0030532 "small nuclear ribonucleoprotein complex" evidence=ISS;NAS] [GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0016070 "RNA metabolic process" evidence=NAS] [GO:0007052 "mitotic spindle organization" evidence=IMP] [GO:0071013 "catalytic step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0045495 "pole plasm" evidence=IDA] [GO:0007281 "germ cell development" evidence=IMP] [GO:0008406 "gonad development" evidence=IMP] [GO:0015030 "Cajal body" evidence=IDA] INTERPRO:IPR001163 EMBL:AE014134 GO:GO:0007052 GO:GO:0003723 GO:GO:0007281 GO:GO:0015030 GO:GO:0008406 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0030532 GO:GO:0045495 Pfam:PF01423 InterPro:IPR006649 SMART:SM00651 eggNOG:COG1958 KO:K11086 InterPro:IPR017131 PIRSF:PIRSF037187 GeneTree:ENSGT00670000098029 OMA:KNNKMIQ OrthoDB:EOG7J70HT EMBL:L02919 EMBL:AY061171 PIR:JN0574 RefSeq:NP_001188780.1 UniGene:Dm.3699 ProteinModelPortal:Q05856 SMR:Q05856 BioGrid:60507 DIP:DIP-18712N IntAct:Q05856 MINT:MINT-283074 STRING:7227.FBpp0079635 PaxDb:Q05856 PRIDE:Q05856 EnsemblMetazoa:FBtr0304118 GeneID:34426 KEGG:dme:Dmel_CG5352 CTD:34426 FlyBase:FBgn0262601 InParanoid:Q05856 PhylomeDB:Q05856 GenomeRNAi:34426 NextBio:788434 Bgee:Q05856 Uniprot:Q05856) HSP 1 Score: 154.451 bits (389), Expect = 1.480e-45 Identity = 112/167 (67.07%), Postives = 120/167 (71.86%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLPGA--GPGIGRAAGXGMIPPGGPGGPAPGLAGPVRGXGGPXPQMMXPGGMAVSAPPQMRGPPPGR---GAPPMP-LIGRGA 161
+RI+LQD RTFIGTFKAFDKHMNLI+GDCEEFRK+R KN P EREEKRVLG VLLRGENIVS+TVEGPPP EEG+PRVP+PGA GPGIGR AG GM P PA GL GPVRG GGP Q M P G V P M PPPG G P MP +GRGA
Sbjct: 17 VRIVLQDSRTFIGTFKAFDKHMNLILGDCEEFRKIRSKN----SKVP-EREEKRVLGFVLLRGENIVSLTVEGPPPPEEGLPRVPIPGAAPGPGIGRVAGRGM-PINLSAVPA-GLQGPVRGVGGPAQQHMAPMGRGVPRAPMMGAPPPGMIPGGMPSMPGNMGRGA 176
BLAST of EMLSAG00000000402 vs. GO
Match: - (symbol:snrpb "small nuclear ribonucleoprotein polypeptides B and B1" species:7955 "Danio rerio" [GO:0019012 "virion" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0019013 "viral nucleocapsid" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA] INTERPRO:IPR001163 ZFIN:ZDB-GENE-040426-1819 GO:GO:0005634 GO:GO:0003723 GO:GO:0030529 InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0019013 Pfam:PF01423 InterPro:IPR006649 SMART:SM00651 eggNOG:COG1958 CTD:6628 HOGENOM:HOG000188899 HOVERGEN:HBG001019 KO:K11086 InterPro:IPR017131 PIRSF:PIRSF037187 GeneTree:ENSGT00670000098029 OMA:KNNKMIQ OrthoDB:EOG7J70HT TreeFam:TF314232 EMBL:CU929339 EMBL:AF259079 EMBL:BC065601 RefSeq:NP_991230.1 UniGene:Dr.30320 STRING:7955.ENSDARP00000023337 Ensembl:ENSDART00000011663 GeneID:402966 KEGG:dre:402966 InParanoid:Q9I9E5 NextBio:20816775 Uniprot:Q9I9E5) HSP 1 Score: 155.221 bits (391), Expect = 2.284e-45 Identity = 92/136 (67.65%), Postives = 103/136 (75.74%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPL--PGAGPGIGRAAGXGMIPPGGPGGPAP-GLAGPVRGXGGPXPQMMXPGG 133
MR ILQD R FIGTFKAFDKHMNLI+ DC+EFRK++PKN + EREEKRVLGLVLLRGEN+VSMTVEGPPP + G+ RVPL GPG+GRAAG G +P G P AP GLAGPVRG GGP Q+M P G
Sbjct: 17 MRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQP-----EREEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGVAGGPGVGRAAGRG-VPAGAPMAQAPAGLAGPVRGVGGPSQQVMTPQG 146
BLAST of EMLSAG00000000402 vs. GO
Match: - (symbol:SNRPB "Small nuclear ribonucleoprotein-associated protein" species:9913 "Bos taurus" [GO:0005683 "U7 snRNP" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA] [GO:0071204 "histone pre-mRNA 3'end processing complex" evidence=IEA] [GO:0071208 "histone pre-mRNA DCP binding" evidence=IEA] INTERPRO:IPR001163 GO:GO:0005737 GO:GO:0071013 InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0005689 GO:GO:0071204 Pfam:PF01423 InterPro:IPR006649 SMART:SM00651 GO:GO:0005683 GO:GO:0071208 InterPro:IPR017131 PIRSF:PIRSF037187 GeneTree:ENSGT00670000098029 OrthoDB:EOG7J70HT TreeFam:TF314232 EMBL:DAAA02036194 Ensembl:ENSBTAT00000001379 OMA:STEAWAR Uniprot:G1K134) HSP 1 Score: 149.828 bits (377), Expect = 3.098e-43 Identity = 89/135 (65.93%), Postives = 98/135 (72.59%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLPGAGPGIGRAAGXGM-IPPGGPGGPAP-GLAGPVRGXGGPXPQMMXPGG 133
MR ILQD R FIGTFKAFDKHMNLI+ DC+EFRK++PKN + EREEKRVLGLVLLRGEN+VSMTVEGPPP + G+ RVPL GA G G G IP G P AP GLAGPVRG GGP Q+M P G
Sbjct: 17 MRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQA-----EREEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGIGRAAGRGIPAGVPMPQAPAGLAGPVRGVGGPSQQVMTPQG 146
BLAST of EMLSAG00000000402 vs. GO
Match: - (symbol:Snrpb "small nuclear ribonucleoprotein B" species:10090 "Mus musculus" [GO:0000387 "spliceosomal snRNP assembly" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005683 "U7 snRNP" evidence=ISO] [GO:0005685 "U1 snRNP" evidence=ISO] [GO:0005687 "U4 snRNP" evidence=ISO] [GO:0005689 "U12-type spliceosomal complex" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0034709 "methylosome" evidence=ISO] [GO:0034719 "SMN-Sm protein complex" evidence=ISO] [GO:0044822 "poly(A) RNA binding" evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome" evidence=ISO] [GO:0071204 "histone pre-mRNA 3'end processing complex" evidence=IDA] [GO:0071208 "histone pre-mRNA DCP binding" evidence=IDA] MGI:MGI:98342 INTERPRO:IPR001163 GO:GO:0005829 GO:GO:0034709 GO:GO:0000387 GO:GO:0071013 InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0034719 GO:GO:0005689 GO:GO:0005687 GO:GO:0071204 Pfam:PF01423 GO:GO:0005685 InterPro:IPR006649 SMART:SM00651 GO:GO:0005683 GO:GO:0071208 eggNOG:COG1958 CTD:6628 HOGENOM:HOG000188899 HOVERGEN:HBG001019 KO:K11086 InterPro:IPR017131 PIRSF:PIRSF037187 GeneTree:ENSGT00670000098029 OMA:KNNKMIQ OrthoDB:EOG7J70HT TreeFam:TF314232 ChiTaRS:SNRPB EMBL:M58761 EMBL:AK146319 PIR:I53659 RefSeq:NP_033251.1 UniGene:Mm.88216 ProteinModelPortal:P27048 SMR:P27048 BioGrid:203377 IntAct:P27048 MINT:MINT-1851409 PhosphoSite:P27048 PaxDb:P27048 PRIDE:P27048 DNASU:20638 Ensembl:ENSMUST00000103199 GeneID:20638 KEGG:mmu:20638 UCSC:uc008mij.1 InParanoid:P27048 NextBio:299039 PMAP-CutDB:P27048 Bgee:P27048 CleanEx:MM_SNRPB Genevestigator:P27048 Uniprot:P27048) HSP 1 Score: 148.288 bits (373), Expect = 8.092e-43 Identity = 89/135 (65.93%), Postives = 98/135 (72.59%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLPGAGPGIGRAAGXGM-IPPGGPGGPAP-GLAGPVRGXGGPXPQMMXPGG 133
MR ILQD R FIGTFKAFDKHMNLI+ DC+EFRK++PKN + EREEKRVLGLVLLRGEN+VSMTVEGPPP + G+ RVPL GA G G G IP G P AP GLAGPVRG GGP Q+M P G
Sbjct: 17 MRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQA-----EREEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGIGRAAGRGIPAGVPMPQAPAGLAGPVRGVGGPSQQVMTPQG 146
BLAST of EMLSAG00000000402 vs. GO
Match: - (symbol:SNRPB "Small nuclear ribonucleoprotein-associated protein" species:9615 "Canis lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071204 "histone pre-mRNA 3'end processing complex" evidence=IEA] [GO:0071208 "histone pre-mRNA DCP binding" evidence=IEA] INTERPRO:IPR001163 GO:GO:0005634 GO:GO:0003723 GO:GO:0030529 InterPro:IPR010920 SUPFAM:SSF50182 Pfam:PF01423 InterPro:IPR006649 SMART:SM00651 CTD:6628 KO:K11086 InterPro:IPR017131 PIRSF:PIRSF037187 GeneTree:ENSGT00670000098029 OMA:KNNKMIQ OrthoDB:EOG7J70HT TreeFam:TF314232 EMBL:AAEX03013840 RefSeq:XP_542930.2 ProteinModelPortal:E2R1C4 SMR:E2R1C4 PRIDE:E2R1C4 Ensembl:ENSCAFT00000030343 GeneID:485806 KEGG:cfa:485806 Uniprot:E2R1C4) HSP 1 Score: 148.288 bits (373), Expect = 8.092e-43 Identity = 89/135 (65.93%), Postives = 98/135 (72.59%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLPGAGPGIGRAAGXGM-IPPGGPGGPAP-GLAGPVRGXGGPXPQMMXPGG 133
MR ILQD R FIGTFKAFDKHMNLI+ DC+EFRK++PKN + EREEKRVLGLVLLRGEN+VSMTVEGPPP + G+ RVPL GA G G G IP G P AP GLAGPVRG GGP Q+M P G
Sbjct: 17 MRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQA-----EREEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGIGRAAGRGIPAGVPMPQAPAGLAGPVRGVGGPSQQVMTPQG 146
BLAST of EMLSAG00000000402 vs. GO
Match: - (symbol:SNRPB "Small nuclear ribonucleoprotein-associated protein B'" species:9365 "Erinaceus europaeus" [GO:0000387 "spliceosomal snRNP assembly" evidence=ISS] [GO:0005683 "U7 snRNP" evidence=ISS] [GO:0005685 "U1 snRNP" evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034709 "methylosome" evidence=ISS] [GO:0034719 "SMN-Sm protein complex" evidence=ISS] INTERPRO:IPR001163 GO:GO:0005829 GO:GO:0005681 GO:GO:0003723 GO:GO:0034709 GO:GO:0000387 InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0034719 GO:GO:0005687 Pfam:PF01423 GO:GO:0005685 InterPro:IPR006649 SMART:SM00651 GO:GO:0005683 HOGENOM:HOG000188899 HOVERGEN:HBG001019 InterPro:IPR017131 PIRSF:PIRSF037187 EMBL:AF134826 EMBL:AF134829 ProteinModelPortal:Q9TU67 SMR:Q9TU67 PRIDE:Q9TU67 Uniprot:Q9TU67) HSP 1 Score: 148.288 bits (373), Expect = 1.051e-42 Identity = 89/135 (65.93%), Postives = 98/135 (72.59%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLPGAGPGIGRAAGXGM-IPPGGPGGPAP-GLAGPVRGXGGPXPQMMXPGG 133
MR ILQD R FIGTFKAFDKHMNLI+ DC+EFRK++PKN + EREEKRVLGLVLLRGEN+VSMTVEGPPP + G+ RVPL GA G G G IP G P AP GLAGPVRG GGP Q+M P G
Sbjct: 17 MRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQA-----EREEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGIGRAAGRGIPAGVPMPQAPAGLAGPVRGVGGPSQQVMTPQG 146
BLAST of EMLSAG00000000402 vs. GO
Match: - (symbol:SNRPB "Small nuclear ribonucleoprotein-associated proteins B and B'" species:9606 "Homo sapiens" [GO:0000387 "spliceosomal snRNP assembly" evidence=IDA;TAS] [GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;TAS] [GO:0005515 "protein binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS] [GO:0005683 "U7 snRNP" evidence=IDA] [GO:0005685 "U1 snRNP" evidence=IDA] [GO:0005687 "U4 snRNP" evidence=IDA] [GO:0005689 "U12-type spliceosomal complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA;TAS] [GO:0006366 "transcription from RNA polymerase II promoter" evidence=TAS] [GO:0006369 "termination of RNA polymerase II transcription" evidence=TAS] [GO:0008334 "histone mRNA metabolic process" evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0030532 "small nuclear ribonucleoprotein complex" evidence=TAS] [GO:0031124 "mRNA 3'-end processing" evidence=TAS] [GO:0034660 "ncRNA metabolic process" evidence=TAS] [GO:0034709 "methylosome" evidence=IDA] [GO:0034719 "SMN-Sm protein complex" evidence=IDA] [GO:0044822 "poly(A) RNA binding" evidence=IDA] [GO:0071013 "catalytic step 2 spliceosome" evidence=IDA] [GO:0071204 "histone pre-mRNA 3'end processing complex" evidence=IEA] [GO:0071208 "histone pre-mRNA DCP binding" evidence=IEA] Reactome:REACT_71 Reactome:REACT_21257 INTERPRO:IPR001163 GO:GO:0005829 GO:GO:0005654 EMBL:CH471133 GO:GO:0034709 GO:GO:0000387 GO:GO:0034660 GO:GO:0071013 InterPro:IPR010920 SUPFAM:SSF50182 Reactome:REACT_1788 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78 GO:GO:0034719 GO:GO:0005689 GO:GO:0005687 GO:GO:0071204 Pfam:PF01423 GO:GO:0008334 GO:GO:0005685 InterPro:IPR006649 SMART:SM00651 GO:GO:0005683 GO:GO:0071208 eggNOG:COG1958 CTD:6628 HOGENOM:HOG000188899 HOVERGEN:HBG001019 KO:K11086 InterPro:IPR017131 PIRSF:PIRSF037187 OMA:KNNKMIQ OrthoDB:EOG7J70HT TreeFam:TF314232 EMBL:X17567 EMBL:X17568 EMBL:X15893 EMBL:AF134825 EMBL:AF134822 EMBL:AF134823 EMBL:AF134824 EMBL:AL049650 EMBL:CR456969 EMBL:M34081 EMBL:M34082 EMBL:X52979 PIR:S09377 RefSeq:NP_003082.1 RefSeq:NP_937859.1 UniGene:Hs.83753 PDB:1D3B PDB:2Y9A PDB:2Y9B PDB:2Y9C PDB:2Y9D PDB:3CW1 PDB:3PGW PDBsum:1D3B PDBsum:2Y9A PDBsum:2Y9B PDBsum:2Y9C PDBsum:2Y9D PDBsum:3CW1 PDBsum:3PGW ProteinModelPortal:P14678 SMR:P14678 BioGrid:112512 DIP:DIP-31239N IntAct:P14678 MINT:MINT-124876 STRING:9606.ENSP00000412566 PhosphoSite:P14678 DMDM:134037 PaxDb:P14678 PRIDE:P14678 DNASU:6628 Ensembl:ENST00000381342 Ensembl:ENST00000438552 GeneID:6628 KEGG:hsa:6628 UCSC:uc002wfz.1 GeneCards:GC20M002442 HGNC:HGNC:11153 HPA:CAB009610 HPA:HPA003482 MIM:182282 neXtProt:NX_P14678 PharmGKB:PA35995 ChiTaRS:SNRPB EvolutionaryTrace:P14678 GeneWiki:SNRPB GenomeRNAi:6628 NextBio:25817 PRO:PR:P14678 ArrayExpress:P14678 Bgee:P14678 CleanEx:HS_SNRPB Genevestigator:P14678 Uniprot:P14678) HSP 1 Score: 148.288 bits (373), Expect = 1.051e-42 Identity = 89/135 (65.93%), Postives = 98/135 (72.59%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLPGAGPGIGRAAGXGM-IPPGGPGGPAP-GLAGPVRGXGGPXPQMMXPGG 133
MR ILQD R FIGTFKAFDKHMNLI+ DC+EFRK++PKN + EREEKRVLGLVLLRGEN+VSMTVEGPPP + G+ RVPL GA G G G IP G P AP GLAGPVRG GGP Q+M P G
Sbjct: 17 MRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQA-----EREEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGIGRAAGRGIPAGVPMPQAPAGLAGPVRGVGGPSQQVMTPQG 146
BLAST of EMLSAG00000000402 vs. GO
Match: - (symbol:SNRPB "Small nuclear ribonucleoprotein-associated protein B'" species:9913 "Bos taurus" [GO:0000387 "spliceosomal snRNP assembly" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005683 "U7 snRNP" evidence=ISS] [GO:0005685 "U1 snRNP" evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034709 "methylosome" evidence=ISS] [GO:0034719 "SMN-Sm protein complex" evidence=ISS] [GO:0042802 "identical protein binding" evidence=ISS] INTERPRO:IPR001163 GO:GO:0005829 GO:GO:0005681 GO:GO:0003723 GO:GO:0042802 GO:GO:0034709 GO:GO:0000387 InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0034719 GO:GO:0005687 Pfam:PF01423 GO:GO:0005685 InterPro:IPR006649 SMART:SM00651 GO:GO:0005683 eggNOG:COG1958 EMBL:BT021483 RefSeq:NP_001029903.1 UniGene:Bt.57435 ProteinModelPortal:Q58DW4 SMR:Q58DW4 STRING:9913.ENSBTAP00000010856 PRIDE:Q58DW4 GeneID:613304 KEGG:bta:613304 CTD:6628 HOGENOM:HOG000188899 HOVERGEN:HBG001019 InParanoid:Q58DW4 KO:K11086 NextBio:20898510 InterPro:IPR017131 PIRSF:PIRSF037187 Uniprot:Q58DW4) HSP 1 Score: 148.288 bits (373), Expect = 1.157e-42 Identity = 89/135 (65.93%), Postives = 98/135 (72.59%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLPGAGPGIGRAAGXGM-IPPGGPGGPAP-GLAGPVRGXGGPXPQMMXPGG 133
MR ILQD R FIGTFKAFDKHMNLI+ DC+EFRK++PKN + EREEKRVLGLVLLRGEN+VSMTVEGPPP + G+ RVPL GA G G G IP G P AP GLAGPVRG GGP Q+M P G
Sbjct: 17 MRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQA-----EREEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGIGRAAGRGIPAGVPMPQAPAGLAGPVRGVGGPSQQVMTPQG 146
BLAST of EMLSAG00000000402 vs. GO
Match: - (symbol:SNRPB "Small nuclear ribonucleoprotein-associated protein B'" species:13616 "Monodelphis domestica" [GO:0000387 "spliceosomal snRNP assembly" evidence=ISS] [GO:0005683 "U7 snRNP" evidence=ISS] [GO:0005685 "U1 snRNP" evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0034709 "methylosome" evidence=ISS] [GO:0034719 "SMN-Sm protein complex" evidence=ISS] INTERPRO:IPR001163 GO:GO:0005829 GO:GO:0005681 GO:GO:0003723 GO:GO:0034709 GO:GO:0000387 InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0034719 GO:GO:0005687 Pfam:PF01423 GO:GO:0005685 InterPro:IPR006649 SMART:SM00651 GO:GO:0005683 eggNOG:COG1958 CTD:6628 HOGENOM:HOG000188899 HOVERGEN:HBG001019 KO:K11086 InterPro:IPR017131 PIRSF:PIRSF037187 EMBL:AF134827 RefSeq:NP_001029144.1 UniGene:Mdm.222 ProteinModelPortal:Q9TU66 SMR:Q9TU66 PRIDE:Q9TU66 GeneID:554245 KEGG:mdo:554245 InParanoid:Q9TU66 Uniprot:Q9TU66) HSP 1 Score: 147.132 bits (370), Expect = 2.551e-42 Identity = 87/135 (64.44%), Postives = 98/135 (72.59%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLPGAGPGIGRAAGXGM-IPPGGPGGPAP-GLAGPVRGXGGPXPQMMXPGG 133
MR ILQD R FIGTFKAFDKHMNLI+ DC+EFRK++PKN + EREEKRVLGLVLLRGEN+VSMTVEGPPP + G+ RVPL GA G G G +P G P AP GLAGP+RG GGP Q+M P G
Sbjct: 17 MRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQA-----EREEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGIGRAAGRGVPAGVPMPQAPAGLAGPIRGVGGPSQQVMTPQG 146
BLAST of EMLSAG00000000402 vs. C. finmarchicus
Match: gi|592778498|gb|GAXK01176070.1| (TSA: Calanus finmarchicus comp3004_c1_seq1 transcribed RNA sequence) HSP 1 Score: 135.576 bits (340), Expect = 7.312e-39 Identity = 66/84 (78.57%), Postives = 72/84 (85.71%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRV 84
MR+ILQD RTFIG FKAFDKHMN+I+GDCEEFRKL+PK+ EREEKRVLGLVLLRGENIVSMTVEGPPP +EGMPRV
Sbjct: 81 MRVILQDSRTFIGQFKAFDKHMNVILGDCEEFRKLKPKSAKS-----AEREEKRVLGLVLLRGENIVSMTVEGPPPNDEGMPRV 317
BLAST of EMLSAG00000000402 vs. C. finmarchicus
Match: gi|592807290|gb|GAXK01147278.1| (TSA: Calanus finmarchicus comp42710_c1_seq1 transcribed RNA sequence) HSP 1 Score: 43.1282 bits (100), Expect = 1.292e-4 Identity = 25/66 (37.88%), Postives = 38/66 (57.58%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENI 66
+ +I D R FIGT K FD+ +NLI+ + E R + ++G E+ VLGL ++RG+NI
Sbjct: 77 VSVITADGRNFIGTLKGFDQTINLILDETHE----RVFSASQGV-------EQVVLGLHIVRGDNI 241
BLAST of EMLSAG00000000402 vs. C. finmarchicus
Match: gi|592779282|gb|GAXK01175286.1| (TSA: Calanus finmarchicus comp3807_c2_seq1 transcribed RNA sequence) HSP 1 Score: 35.8094 bits (81), Expect = 2.866e-2 Identity = 16/63 (25.40%), Postives = 35/63 (55.56%), Query Frame = 0
Query: 5 LQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIV 67
+++ R G A+D+H+N+I+G+ EE + + + V R KR + ++ +RG+ ++
Sbjct: 135 MRNERELKGRLHAYDQHLNMILGEVEE--TVTTAEIDEETYEEVFRSTKRNIPMLFVRGDGVI 317
BLAST of EMLSAG00000000402 vs. C. finmarchicus
Match: gi|592779283|gb|GAXK01175285.1| (TSA: Calanus finmarchicus comp3807_c1_seq1 transcribed RNA sequence) HSP 1 Score: 35.8094 bits (81), Expect = 2.866e-2 Identity = 16/63 (25.40%), Postives = 35/63 (55.56%), Query Frame = 0
Query: 5 LQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIV 67
+++ R G A+D+H+N+I+G+ EE + + + V R KR + ++ +RG+ ++
Sbjct: 121 MRNERELKGRLHAYDQHLNMILGEVEE--TVTTAEIDEETYEEVFRSTKRNIPMLFVRGDGVI 303
BLAST of EMLSAG00000000402 vs. C. finmarchicus
Match: gi|592892152|gb|GAXK01066223.1| (TSA: Calanus finmarchicus comp5076_c1_seq1 transcribed RNA sequence) HSP 1 Score: 31.187 bits (69), Expect = 1.176e+0 Identity = 16/55 (29.09%), Postives = 26/55 (47.27%), Query Frame = 0
Query: 13 GTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIV 67
G FD++MNL++ D E +R +R LG ++L+G+NI
Sbjct: 160 GHIVGFDEYMNLVLDDSSEIH--------------TKRHTERKLGRIMLKGDNIT 282
BLAST of EMLSAG00000000402 vs. C. finmarchicus
Match: gi|592892153|gb|GAXK01066222.1| (TSA: Calanus finmarchicus comp4573_c0_seq4 transcribed RNA sequence) HSP 1 Score: 28.8758 bits (63), Expect = 7.567e+0 Identity = 20/76 (26.32%), Postives = 41/76 (53.95%), Query Frame = 0
Query: 3 IILQDXRTFIGTFKAFDKHMNLIM-GDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPA 77
I ++ + +G KAFD+H N+++ G E + +L K PV ++ R + + LRG++++ + ++ P A
Sbjct: 154 INCRNNKKLLGRVKAFDRHCNMVLEGVKEMWTELPKTGKGKKKAKPVNKD--RFISKMFLRGDSVI-LVLKNPLAA 372
BLAST of EMLSAG00000000402 vs. C. finmarchicus
Match: gi|592892155|gb|GAXK01066220.1| (TSA: Calanus finmarchicus comp4573_c0_seq2 transcribed RNA sequence) HSP 1 Score: 28.8758 bits (63), Expect = 8.114e+0 Identity = 20/76 (26.32%), Postives = 41/76 (53.95%), Query Frame = 0
Query: 3 IILQDXRTFIGTFKAFDKHMNLIM-GDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPA 77
I ++ + +G KAFD+H N+++ G E + +L K PV ++ R + + LRG++++ + ++ P A
Sbjct: 154 INCRNNKKLLGRVKAFDRHCNMVLEGVKEMWTELPKTGKGKKKAKPVNKD--RFISKMFLRGDSVI-LVLKNPLAA 372
BLAST of EMLSAG00000000402 vs. C. finmarchicus
Match: gi|592892156|gb|GAXK01066219.1| (TSA: Calanus finmarchicus comp4573_c0_seq1 transcribed RNA sequence) HSP 1 Score: 28.8758 bits (63), Expect = 8.136e+0 Identity = 20/76 (26.32%), Postives = 41/76 (53.95%), Query Frame = 0
Query: 3 IILQDXRTFIGTFKAFDKHMNLIM-GDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPA 77
I ++ + +G KAFD+H N+++ G E + +L K PV ++ R + + LRG++++ + ++ P A
Sbjct: 156 INCRNNKKLLGRVKAFDRHCNMVLEGVKEMWTELPKTGKGKKKAKPVNKD--RFISKMFLRGDSVI-LVLKNPLAA 374
BLAST of EMLSAG00000000402 vs. L. salmonis peptides
Match: EMLSAP00000000402 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1063:89051:89620:1 gene:EMLSAG00000000402 transcript:EMLSAT00000000402 description:"augustus_masked-LSalAtl2s1063-processed-gene-0.5") HSP 1 Score: 300.442 bits (768), Expect = 9.062e-105 Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLPGAGPGIGRAAGXGMIPPGGPGGPAPGLAGPVRGXGGPXPQMMXPGGMAVSAPPQMRGPPPGRGAPPMPLIGRGAGGVPRF 167
MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLPGAGPGIGRAAGXGMIPPGGPGGPAPGLAGPVRGXGGPXPQMMXPGGMAVSAPPQMRGPPPGRGAPPMPLIGRGAGGVPRF
Sbjct: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLPGAGPGIGRAAGXGMIPPGGPGGPAPGLAGPVRGXGGPXPQMMXPGGMAVSAPPQMRGPPPGRGAPPMPLIGRGAGGVPRF 167
BLAST of EMLSAG00000000402 vs. SwissProt
Match: gi|75057373|sp|Q9N1Q0.1|RSMB_MACEU (RecName: Full=Small nuclear ribonucleoprotein-associated protein B'; Short=snRNP-B'; Short=snRPB'; AltName: Full=Sm protein B'; Short=Sm-B'; Short=SmB') HSP 1 Score: 167.933 bits (424), Expect = 1.170e-51 Identity = 95/136 (69.85%), Postives = 105/136 (77.21%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLPGA--GPGIGRAAGXGMIPPGGPGGPAP-GLAGPVRGXGGPXPQMMXPGG 133
MR ILQD R FIGTFKAFDKHMNLI+ DC+EFRK++PKN + EREEKRVLGLVLLRGEN+VSMTVEGPPP + G+ RVPL GA GPGIGRAAG G +P G P AP GLAGPVRG GGP Q+M P G
Sbjct: 17 MRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQA-----EREEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLSGAAGGPGIGRAAGRG-VPAGVPMPQAPAGLAGPVRGVGGPSQQVMTPQG 146
BLAST of EMLSAG00000000402 vs. SwissProt
Match: gi|10720262|sp|Q05856.1|RSMB_DROME (RecName: Full=Small nuclear ribonucleoprotein-associated protein B; Short=snRNP-B; AltName: Full=Sm protein B; Short=Sm-B; Short=SmB) HSP 1 Score: 154.451 bits (389), Expect = 6.292e-47 Identity = 112/167 (67.07%), Postives = 120/167 (71.86%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLPGA--GPGIGRAAGXGMIPPGGPGGPAPGLAGPVRGXGGPXPQMMXPGGMAVSAPPQMRGPPPGR---GAPPMP-LIGRGA 161
+RI+LQD RTFIGTFKAFDKHMNLI+GDCEEFRK+R KN P EREEKRVLG VLLRGENIVS+TVEGPPP EEG+PRVP+PGA GPGIGR AG GM P PA GL GPVRG GGP Q M P G V P M PPPG G P MP +GRGA
Sbjct: 17 VRIVLQDSRTFIGTFKAFDKHMNLILGDCEEFRKIRSKN----SKVP-EREEKRVLGFVLLRGENIVSLTVEGPPPPEEGLPRVPIPGAAPGPGIGRVAGRGM-PINLSAVPA-GLQGPVRGVGGPAQQHMAPMGRGVPRAPMMGAPPPGMIPGGMPSMPGNMGRGA 176
BLAST of EMLSAG00000000402 vs. SwissProt
Match: gi|134038|sp|P27048.1|RSMB_MOUSE (RecName: Full=Small nuclear ribonucleoprotein-associated protein B; Short=snRNP-B; Short=snRPB; AltName: Full=Sm protein B; Short=Sm-B; Short=SmB) HSP 1 Score: 148.288 bits (373), Expect = 3.933e-44 Identity = 89/135 (65.93%), Postives = 98/135 (72.59%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLPGAGPGIGRAAGXGM-IPPGGPGGPAP-GLAGPVRGXGGPXPQMMXPGG 133
MR ILQD R FIGTFKAFDKHMNLI+ DC+EFRK++PKN + EREEKRVLGLVLLRGEN+VSMTVEGPPP + G+ RVPL GA G G G IP G P AP GLAGPVRG GGP Q+M P G
Sbjct: 17 MRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQA-----EREEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGIGRAAGRGIPAGVPMPQAPAGLAGPVRGVGGPSQQVMTPQG 146
BLAST of EMLSAG00000000402 vs. SwissProt
Match: gi|134037|sp|P14678.2|RSMB_HUMAN (RecName: Full=Small nuclear ribonucleoprotein-associated proteins B and B'; Short=snRNP-B; AltName: Full=Sm protein B/B'; Short=Sm-B/B'; Short=SmB/B') HSP 1 Score: 148.288 bits (373), Expect = 5.210e-44 Identity = 89/135 (65.93%), Postives = 98/135 (72.59%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLPGAGPGIGRAAGXGM-IPPGGPGGPAP-GLAGPVRGXGGPXPQMMXPGG 133
MR ILQD R FIGTFKAFDKHMNLI+ DC+EFRK++PKN + EREEKRVLGLVLLRGEN+VSMTVEGPPP + G+ RVPL GA G G G IP G P AP GLAGPVRG GGP Q+M P G
Sbjct: 17 MRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQA-----EREEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGIGRAAGRGIPAGVPMPQAPAGLAGPVRGVGGPSQQVMTPQG 146
BLAST of EMLSAG00000000402 vs. SwissProt
Match: gi|12643865|sp|Q9TU67.1|RSMB_ERIEU (RecName: Full=Small nuclear ribonucleoprotein-associated protein B'; Short=snRNP-B'; Short=snRPB'; AltName: Full=Sm protein B'; Short=Sm-B'; Short=SmB') HSP 1 Score: 148.288 bits (373), Expect = 5.210e-44 Identity = 89/135 (65.93%), Postives = 98/135 (72.59%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLPGAGPGIGRAAGXGM-IPPGGPGGPAP-GLAGPVRGXGGPXPQMMXPGG 133
MR ILQD R FIGTFKAFDKHMNLI+ DC+EFRK++PKN + EREEKRVLGLVLLRGEN+VSMTVEGPPP + G+ RVPL GA G G G IP G P AP GLAGPVRG GGP Q+M P G
Sbjct: 17 MRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQA-----EREEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGIGRAAGRGIPAGVPMPQAPAGLAGPVRGVGGPSQQVMTPQG 146
BLAST of EMLSAG00000000402 vs. SwissProt
Match: gi|75056662|sp|Q58DW4.1|RSMB_BOVIN (RecName: Full=Small nuclear ribonucleoprotein-associated protein B'; Short=snRNP-B'; Short=snRPB'; AltName: Full=Sm protein B'; Short=Sm-B'; Short=SmB') HSP 1 Score: 148.288 bits (373), Expect = 5.744e-44 Identity = 89/135 (65.93%), Postives = 98/135 (72.59%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLPGAGPGIGRAAGXGM-IPPGGPGGPAP-GLAGPVRGXGGPXPQMMXPGG 133
MR ILQD R FIGTFKAFDKHMNLI+ DC+EFRK++PKN + EREEKRVLGLVLLRGEN+VSMTVEGPPP + G+ RVPL GA G G G IP G P AP GLAGPVRG GGP Q+M P G
Sbjct: 17 MRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQA-----EREEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGIGRAAGRGIPAGVPMPQAPAGLAGPVRGVGGPSQQVMTPQG 146
BLAST of EMLSAG00000000402 vs. SwissProt
Match: gi|10720265|sp|Q9TU66.1|RSMB_MONDO (RecName: Full=Small nuclear ribonucleoprotein-associated protein B'; Short=snRNP-B'; Short=snRPB'; AltName: Full=Sm protein B'; Short=Sm-B'; Short=SmB') HSP 1 Score: 147.132 bits (370), Expect = 1.280e-43 Identity = 87/135 (64.44%), Postives = 98/135 (72.59%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLPGAGPGIGRAAGXGM-IPPGGPGGPAP-GLAGPVRGXGGPXPQMMXPGG 133
MR ILQD R FIGTFKAFDKHMNLI+ DC+EFRK++PKN + EREEKRVLGLVLLRGEN+VSMTVEGPPP + G+ RVPL GA G G G +P G P AP GLAGP+RG GGP Q+M P G
Sbjct: 17 MRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQA-----EREEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGIGRAAGRGVPAGVPMPQAPAGLAGPIRGVGGPSQQVMTPQG 146
BLAST of EMLSAG00000000402 vs. SwissProt
Match: gi|10720263|sp|Q9PV94.1|RSMB_CHICK (RecName: Full=Small nuclear ribonucleoprotein-associated protein B'; Short=snRNP-B'; Short=snRPB'; AltName: Full=Sm protein B'; Short=Sm-B'; Short=SmB') HSP 1 Score: 147.132 bits (370), Expect = 1.678e-43 Identity = 88/135 (65.19%), Postives = 98/135 (72.59%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLPGAGPGIGRAAGXGM-IPPGGPGGPAP-GLAGPVRGXGGPXPQMMXPGG 133
MR ILQD R FIGTFKAFDKHMNLI+ DC+EFRK++PKN + EREEKRVLGLVLLRGEN+VSMTVEGPPP + G+ RVPL GA G G G +P G P AP GLAGPVRG GGP Q+M P G
Sbjct: 17 MRCILQDGRVFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQP-----EREEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGVGRAAGRGVPAGAPMPQAPAGLAGPVRGVGGPSQQVMTPQG 146
BLAST of EMLSAG00000000402 vs. SwissProt
Match: gi|115311861|sp|Q17QN3.1|RSMN_BOVIN (RecName: Full=Small nuclear ribonucleoprotein-associated protein N; Short=snRNP-N; AltName: Full=Sm protein N; Short=Sm-N; Short=SmN) HSP 1 Score: 146.362 bits (368), Expect = 3.111e-43 Identity = 98/171 (57.31%), Postives = 109/171 (63.74%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLPGAGPGIGRAAGXGM-IPPGGPGGPAP-GLAGPVRGXGGPXPQMMXPGG-------------MAVSAPPQMRGPPPGRGAPPMPL 156
MR ILQD R FIGTFKAFDKHMNLI+ DC+EFRK++PKN + EREEKRVLGLVLLRGEN+VSMTVEGPPP + G+ RVPL GA G G G +P G P AP GLAGPVRG GGP Q+M P G AP Q PPGRG P P+
Sbjct: 17 MRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNAKQP-----EREEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGVGRAAGRGVPAGVPIPQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAVAATASIAGAPTQY---PPGRGTAPTPV 179
BLAST of EMLSAG00000000402 vs. SwissProt
Match: gi|52783793|sp|P63164.1|RSMN_RAT (RecName: Full=Small nuclear ribonucleoprotein-associated protein N; Short=snRNP-N; AltName: Full=Sm protein D; Short=Sm-D; AltName: Full=Sm protein N; Short=Sm-N; Short=SmN >gi|52783794|sp|P63162.1|RSMN_HUMAN RecName: Full=Small nuclear ribonucleoprotein-associated protein N; Short=snRNP-N; AltName: Full=Sm protein D; Short=Sm-D; AltName: Full=Sm protein N; Short=Sm-N; Short=SmN; AltName: Full=Tissue-specific-splicing protein >gi|52783795|sp|P63163.1|RSMN_MOUSE RecName: Full=Small nuclear ribonucleoprotein-associated protein N; Short=snRNP-N; AltName: Full=Sm protein D; Short=Sm-D; AltName: Full=Sm protein N; Short=Sm-N; Short=SmN; AltName: Full=Tissue-specific-splicing protein >gi|75070532|sp|Q5R6I0.1|RSMN_PONAB RecName: Full=Small nuclear ribonucleoprotein-associated protein N; Short=snRNP-N; AltName: Full=Sm protein N; Short=Sm-N; Short=SmN >gi|75071163|sp|Q60HD3.1|RSMN_MACFA RecName: Full=Small nuclear ribonucleoprotein-associated protein N; Short=snRNP-N; AltName: Full=Sm protein N; Short=Sm-N; Short=SmN) HSP 1 Score: 144.821 bits (364), Expect = 1.217e-42 Identity = 88/135 (65.19%), Postives = 98/135 (72.59%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLPGAGPGIGRAAGXGM-IPPGGPGGPAP-GLAGPVRGXGGPXPQMMXPGG 133
MR ILQD R FIGTFKAFDKHMNLI+ DC+EFRK++PKN + EREEKRVLGLVLLRGEN+VSMTVEGPPP + G+ RVPL GA G G G +P G P AP GLAGPVRG GGP Q+M P G
Sbjct: 17 MRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNAKQP-----EREEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGVGRAAGRGVPAGVPIPQAPAGLAGPVRGVGGPSQQVMTPQG 146
BLAST of EMLSAG00000000402 vs. Select Arthropod Genomes
Match: gb|EFA04762.1| (Small nuclear ribonucleoprotein-associated protein B-like Protein [Tribolium castaneum]) HSP 1 Score: 164.466 bits (415), Expect = 6.333e-51 Identity = 103/145 (71.03%), Postives = 115/145 (79.31%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLPGA--GPGIGRAAGXGMIPPGGPGGPAPGLAGPVRGXGGPXPQMMXPGGM-AVSAPPQM 142
+RI LQD RTFIGTFKAFDKHMN+I+GDCEEFRK++PKN + VEREEKRVLG VLLRGE+IVS+TVEGPPP EEG+PRVP+PGA GPGIGRAAG GM P G GG GL GPVRG GGP Q+M PGG V+A PQM
Sbjct: 17 VRITLQDSRTFIGTFKAFDKHMNMILGDCEEFRKIKPKN------SKVEREEKRVLGFVLLRGESIVSLTVEGPPPPEEGLPRVPIPGAAPGPGIGRAAGRGM--PAGMGGVPVGLQGPVRGVGGPSQQVMTPGGRGQVAAAPQM 153
BLAST of EMLSAG00000000402 vs. Select Arthropod Genomes
Match: NP_001155181.1 (small ribonucleoprotein particle protein B [Apis mellifera]) HSP 1 Score: 163.696 bits (413), Expect = 1.344e-50 Identity = 103/146 (70.55%), Postives = 114/146 (78.08%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLPGA--GPGIGRAAGXGMIPPGGPGGPAPGLAGPVRGXGGPXPQMMXPGGM-AVSAPPQMR 143
+RIILQD RTFIGTFKAFDKHMNLI+GDCEEFRK++PKN + ERE+KRVLG VLLRGENIVS+TVEGPPP EEG+PRVP+PGA GPG+GRAAG GM P G GL GPVRG GGP Q+M PGG VSAPPQM
Sbjct: 17 VRIILQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKPKNTKQP-----EREDKRVLGFVLLRGENIVSLTVEGPPPPEEGLPRVPIPGAAPGPGMGRAAGRGM--PANVAGVPAGLQGPVRGVGGPSQQIMTPGGRGQVSAPPQMH 155
BLAST of EMLSAG00000000402 vs. Select Arthropod Genomes
Match: EFX77059.1 (hypothetical protein DAPPUDRAFT_305959 [Daphnia pulex]) HSP 1 Score: 160.614 bits (405), Expect = 3.164e-49 Identity = 107/161 (66.46%), Postives = 116/161 (72.05%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPR--VPLPGAGPGIGRAAGXGMIPPGGPGGPAPGLAGPVRGXGGPXPQMM-----XPGGMAVSAPPQMRGPPPGRGAPPM 154
+R+ LQD RTFIGTFKAFDKHMNLI+GDCEEFRK++ K + K EREEKRVLGLVLLRGENIVSMTVEGPPP EE MPR +P GPG+GRAAG G +P P G GL GPVRG GGP PQMM GG AVSAPPQMR P APPM
Sbjct: 17 VRVTLQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKAK-INKSGVGATEREEKRVLGLVLLRGENIVSMTVEGPPPTEESMPRVPMPGVVPGPGVGRAAGRG-VPVNAPMGAPAGLQGPVRGVGGPAPQMMVPGGRGAGGPAVSAPPQMRPQVP---APPM 172
BLAST of EMLSAG00000000402 vs. Select Arthropod Genomes
Match: ADV37030.1 (small ribonucleoprotein particle protein SmB [Drosophila melanogaster]) HSP 1 Score: 154.451 bits (389), Expect = 3.049e-47 Identity = 112/167 (67.07%), Postives = 120/167 (71.86%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLPGA--GPGIGRAAGXGMIPPGGPGGPAPGLAGPVRGXGGPXPQMMXPGGMAVSAPPQMRGPPPGR---GAPPMP-LIGRGA 161
+RI+LQD RTFIGTFKAFDKHMNLI+GDCEEFRK+R KN P EREEKRVLG VLLRGENIVS+TVEGPPP EEG+PRVP+PGA GPGIGR AG GM P PA GL GPVRG GGP Q M P G V P M PPPG G P MP +GRGA
Sbjct: 17 VRIVLQDSRTFIGTFKAFDKHMNLILGDCEEFRKIRSKN----SKVP-EREEKRVLGFVLLRGENIVSLTVEGPPPPEEGLPRVPIPGAAPGPGIGRVAGRGM-PINLSAVPA-GLQGPVRGVGGPAQQHMAPMGRGVPRAPMMGAPPPGMIPGGMPSMPGNMGRGA 176
BLAST of EMLSAG00000000402 vs. Select Arthropod Genomes
Match: gb|EEC09351.1| (flagelliform silk protein, putative [Ixodes scapularis]) HSP 1 Score: 145.591 bits (366), Expect = 3.566e-43 Identity = 97/135 (71.85%), Postives = 107/135 (79.26%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLPGA--GPGIGRAAGXGMIPPGGPGGPAPGLAGPVRGXGGPXPQMMXPGG 133
MR+ILQD R FIGTFKAFDKHMNLI+GDCEEFRK++ KN AK +REEKRVLGLVLLRGENIVS+TVEGPPP EEG+PRVP+PGA GPGIGRAAG G+ P G GL GPVRG GGP PQ+M P G
Sbjct: 17 MRVILQDSRIFIGTFKAFDKHMNLILGDCEEFRKVKGKNQAKQG----DREEKRVLGLVLLRGENIVSLTVEGPPPPEEGLPRVPIPGATPGPGIGRAAGRGV-PAAPVGAAPAGLQGPVRGVGGPSPQVMAPQG 146
BLAST of EMLSAG00000000402 vs. Select Arthropod Genomes
Match: EAA11463.4 (AGAP005523-PA [Anopheles gambiae str. PEST]) HSP 1 Score: 136.732 bits (343), Expect = 2.844e-40 Identity = 97/147 (65.99%), Postives = 106/147 (72.11%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRV--PLPGAGPGIGRAAGXGMIPPGGPGGPAPGLAGPVRGXGGPXPQMMXP--GGMAVSAPPQMR 143
+RI+LQD RTFIGTFKAFDKHMNLI+GDCEEFRK++PKN P EREEKRVLG VLLRG NIVS+T+EGPPP EEG+PRV P GPG+GR G GM P G GL GPVRG GGP Q M P G VSAPPQMR
Sbjct: 17 VRIVLQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKPKNTK--LP---EREEKRVLGFVLLRGGNIVSLTIEGPPPPEEGLPRVPIPGGAGGPGMGRVTGRGM--PANIAGVPAGLQGPVRGVGGPSQQHMAPVGRGQQVSAPPQMR 156
BLAST of EMLSAG00000000402 vs. Select Arthropod Genomes
Match: EEB17351.1 (Small nuclear ribonucleoprotein-associated protein B, putative [Pediculus humanus corporis]) HSP 1 Score: 131.724 bits (330), Expect = 2.089e-38 Identity = 94/144 (65.28%), Postives = 110/144 (76.39%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLP--GAGPGIGRAAGXGMIPPGGPGGPAPGLAGPVRGXGGPXPQMMXPGGMAVSAPPQM 142
+RI LQD RTFIGTFKAFDKHMNLI+GDCEEFR+ +PKN + ER+EKR LG VLLRG+NIVS+TVEGPPP EEG+PRVP+P G GPGIG+AAG G+ P G PA GL GPVRG GGP Q+M PG ++APP +
Sbjct: 9 IRITLQDSRTFIGTFKAFDKHMNLILGDCEEFRRTKPKNSKEA-----ERDEKRSLGFVLLRGQNIVSLTVEGPPPPEEGLPRVPIPGAGPGPGIGKAAGRGL--PMGQIIPA-GLQGPVRGVGGPSQQVMTPGQGQMAAPPHL 144
BLAST of EMLSAG00000000402 vs. Select Arthropod Genomes
Match: gb|KPM11644.1| (MOB1-like protein [Sarcoptes scabiei]) HSP 1 Score: 126.716 bits (317), Expect = 1.364e-33 Identity = 95/162 (58.64%), Postives = 108/162 (66.67%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLPGAGPGIGRAAGX--GMIPPGGPGGPAPGLAGPVRGXGGPXPQM-------MXPGGMAVSAPPQMRGPPPGRGAPP 153
MRIILQD RTFIGTFKAFDKHMN+I+ DCEEFRK+R K KG +EREEKRVLG VLLRG+NIVS+TVEGPPP EEG+PRVP GPG+GRAAG + G PGL GP+RG GGP + P G+A A P + PP G PP
Sbjct: 17 MRIILQDSRTFIGTFKAFDKHMNIILSDCEEFRKIRGKGT-KG----IEREEKRVLGFVLLRGQNIVSLTVEGPPPPEEGLPRVPGVIPGPGLGRAAGRGVPAVAVPPVVGAPPGLQGPIRGIGGPAAAAMAPQARGIPPVGLA--ARPGIPIMPP--GLPP 169
BLAST of EMLSAG00000000402 vs. Select Arthropod Genomes
Match: gb|KFM74614.1| (Small nuclear ribonucleoprotein-associated protein B, partial [Stegodyphus mimosarum]) HSP 1 Score: 92.0485 bits (227), Expect = 2.704e-24 Identity = 42/60 (70.00%), Postives = 47/60 (78.33%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVL 60
MR+ LQD R FIGTFKAFDKHMNLI+GDCEEFRK++PK E+EEKRVLGLVL
Sbjct: 17 MRVTLQDSRIFIGTFKAFDKHMNLILGDCEEFRKIKPKK-----NKDSEKEEKRVLGLVL 71
BLAST of EMLSAG00000000402 vs. Select Arthropod Genomes
Match: gb|KFM60815.1| (Small nuclear ribonucleoprotein-associated protein B, partial [Stegodyphus mimosarum]) HSP 1 Score: 61.2326 bits (147), Expect = 5.026e-12 Identity = 34/71 (47.89%), Postives = 49/71 (69.01%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTV 71
MR+IL D RTFIG F A+DKHMNL++ +C E++K +P P V K+ LG+V+LRGE+++S+ V
Sbjct: 17 MRVILCDKRTFIGEFVAYDKHMNLVLINCTEYKKYKPSKSKSKEPIEV----KKNLGVVILRGESVMSIIV 83
BLAST of EMLSAG00000000402 vs. nr
Match: gi|1026567822|gb|OAD56398.1| (Small nuclear ribonucleoprotein-associated protein B, partial [Eufriesea mexicana]) HSP 1 Score: 181.8 bits (460), Expect = 4.043e-55 Identity = 102/146 (69.86%), Postives = 113/146 (77.40%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLPGA--GPGIGRAAGXGMIPPGGPGGPAPGLAGPVRGXGGPXPQMMXPGGM-AVSAPPQMR 143
+RIILQD RTFIGTFKAFDKHMNLI+GDCEEFRK++PKN + ERE+KRVLG VLLRGENIVS+TVEGPP EEG+PRVP+PGA GPG+GRAAG GM P G GL GPVRG GGP Q+M PGG VSAPPQM
Sbjct: 16 VRIILQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKPKNTKQP-----EREDKRVLGFVLLRGENIVSLTVEGPPAPEEGLPRVPIPGAAPGPGMGRAAGRGM--PANVAGVPAGLQGPVRGVGGPSQQIMTPGGRGQVSAPPQMH 154
BLAST of EMLSAG00000000402 vs. nr
Match: gi|1059225417|ref|XP_017758257.1| (PREDICTED: small nuclear ribonucleoprotein-associated protein B [Eufriesea mexicana]) HSP 1 Score: 181.415 bits (459), Expect = 5.758e-55 Identity = 102/146 (69.86%), Postives = 113/146 (77.40%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLPGA--GPGIGRAAGXGMIPPGGPGGPAPGLAGPVRGXGGPXPQMMXPGGM-AVSAPPQMR 143
+RIILQD RTFIGTFKAFDKHMNLI+GDCEEFRK++PKN + ERE+KRVLG VLLRGENIVS+TVEGPP EEG+PRVP+PGA GPG+GRAAG GM P G GL GPVRG GGP Q+M PGG VSAPPQM
Sbjct: 17 VRIILQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKPKNTKQP-----EREDKRVLGFVLLRGENIVSLTVEGPPAPEEGLPRVPIPGAAPGPGMGRAAGRGM--PANVAGVPAGLQGPVRGVGGPSQQIMTPGGRGQVSAPPQMH 155
BLAST of EMLSAG00000000402 vs. nr
Match: gi|1009597836|ref|XP_015927412.1| (PREDICTED: small nuclear ribonucleoprotein-associated protein B-like [Parasteatoda tepidariorum]) HSP 1 Score: 175.637 bits (444), Expect = 2.157e-52 Identity = 96/136 (70.59%), Postives = 107/136 (78.68%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLPGA--GPGIGRAAGXGMIPPGGPGGPAP-GLAGPVRGXGGPXPQMMXPGG 133
MR+ LQD R FIGTFKAFDKHMNLI+GDCEEFRK++PK E+EEKRVLG VLLRGENIVS+TVEGPPPAEEG+PRVP+PGA GPG+GRAAG G+ P P G AP GL GPVRG GGP PQ+M P G
Sbjct: 17 MRVTLQDSRIFIGTFKAFDKHMNLILGDCEEFRKIKPKKNKDA-----EKEEKRVLGFVLLRGENIVSLTVEGPPPAEEGIPRVPIPGAAPGPGLGRAAGRGV--PAAPVGAAPVGLQGPVRGVGGPSPQVMTPQG 145
BLAST of EMLSAG00000000402 vs. nr
Match: gi|957816224|ref|XP_014665708.1| (PREDICTED: small nuclear ribonucleoprotein-associated protein B-like [Priapulus caudatus]) HSP 1 Score: 172.94 bits (437), Expect = 1.107e-51 Identity = 105/147 (71.43%), Postives = 115/147 (78.23%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPL--PGAGPGIGRAAGXGMIPPGG--PGGPAPGLAGPVRGXGGPXPQMMXPG--GMAVSAPPQ 141
MR+ LQD R FIGTFKAFDKHMNLI+GDCEEFRKL+PK +KG EREEKRVLGLVLLRGENIVSMTVEGPPPA++G+PRVP+ GPG+GRAAG G +P GG G APGL GPVRG GGP PQMM P G VSAPPQ
Sbjct: 17 MRVTLQDSRIFIGTFKAFDKHMNLILGDCEEFRKLKPK--SKGT----EREEKRVLGLVLLRGENIVSMTVEGPPPADDGVPRVPIPGAMGGPGMGRAAGRG-VPMGGAATSGAAPGLQGPVRGVGGPSPQMMTPQARGAQVSAPPQ 156
BLAST of EMLSAG00000000402 vs. nr
Match: gi|440586625|emb|CCK33034.1| (RNA-binding protein SmB [Platynereis dumerilii]) HSP 1 Score: 171.4 bits (433), Expect = 3.834e-51 Identity = 105/146 (71.92%), Postives = 115/146 (78.77%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLPG-AGPGIGRAAGXGMIPPGGPGGPAPGLAGPVRGXGGPXPQMMXPG--GMAVSAPPQMR 143
MR LQD R FIGTFKAFDKHMNLI+GDC+EFRK++PK + EREEKRVLGLVLLRGEN+VSMTVEGPPPA+EGM RVPLPG AGPG+GRAAG G +P GG G PGL GPVRG GGP QMM PG G VSAPPQ+R
Sbjct: 17 MRCTLQDGRIFIGTFKAFDKHMNLILGDCDEFRKIKPKKAKE------EREEKRVLGLVLLRGENLVSMTVEGPPPADEGMARVPLPGSAGPGMGRAAGRG-VPSGGAAGAMPGLQGPVRGVGGPSSQMMQPGGRGSTVSAPPQIR 155
BLAST of EMLSAG00000000402 vs. nr
Match: gi|524888446|ref|XP_005100794.1| (PREDICTED: small nuclear ribonucleoprotein-associated protein B'-like [Aplysia californica]) HSP 1 Score: 168.318 bits (425), Expect = 4.437e-50 Identity = 95/134 (70.90%), Postives = 103/134 (76.87%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLPGA--GPGIGRAAGXGMIPPGGPGGP-APGLAGPVRGXGGPXPQMMXP 131
MR LQD R FIGTFKAFDKHMNLI+GDC+EFRK++PKNV EREEKRVLGLVLLRGE++VSMTVEGPP AEEG+ RVPL GA GPG+GRAAG GM G G P APGL GP RG GGP QMM P
Sbjct: 19 MRCQLQDGRIFIGTFKAFDKHMNLILGDCDEFRKIKPKNVKSN-----EREEKRVLGLVLLRGEHLVSMTVEGPPAAEEGVARVPLAGASSGPGVGRAAGRGMA--GATGMPAAPGLQGPARGVGGPSQQMMTP 145
BLAST of EMLSAG00000000402 vs. nr
Match: gi|585698065|ref|XP_006822502.1| (PREDICTED: small nuclear ribonucleoprotein-associated protein B'-like [Saccoglossus kowalevskii]) HSP 1 Score: 166.777 bits (421), Expect = 6.795e-50 Identity = 93/135 (68.89%), Postives = 106/135 (78.52%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLPGA--GPGIGRAAGXGMIPPGGPGGPAPGLAGPVRGXGGPXPQMMXPGG 133
MRI +QD R FIGTF AFDKHMNLI+GDCEEFRK++PKN + EREEKRVLGLVLLRGE++VSMTVEGPPPA EG+PRVP+PGA GPG+GRAAG G +P PA GL+GPVRG GGP Q+M P G
Sbjct: 17 MRIAIQDGRIFIGTFLAFDKHMNLILGDCEEFRKIKPKNTKQP-----EREEKRVLGLVLLRGEHLVSMTVEGPPPAVEGLPRVPIPGAAPGPGMGRAAGRG-VPAPSSHAPA-GLSGPVRGIGGPSQQIMTPQG 144
BLAST of EMLSAG00000000402 vs. nr
Match: gi|405960791|gb|EKC26669.1| (Small nuclear ribonucleoprotein-associated protein B' [Crassostrea gigas]) HSP 1 Score: 166.007 bits (419), Expect = 8.519e-50 Identity = 94/135 (69.63%), Postives = 105/135 (77.78%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLPGAGP--GIGRAAGXGMIPPGGPGGPAPGLAGPVRGXGGPXPQMMXPGG 133
MR LQD RTFIGTFKAFDKHMNLI+GDC+EFRK++PK+ +G EREEKRVLGLVLLRGE++VSMTVEGPPPAEEG+ RVPL GA P G+GRAAG G+ P PGL GP RG GGP PQMM PGG
Sbjct: 17 MRCALQDGRTFIGTFKAFDKHMNLILGDCDEFRKIKPKSSKQG-----EREEKRVLGLVLLRGEHLVSMTVEGPPPAEEGVARVPLAGAAPGQGMGRAAGRGISGP--GASGGPGLQGPARGVGGPSPQMMAPGG 144
BLAST of EMLSAG00000000402 vs. nr
Match: gi|952513400|gb|KRT79984.1| (hypothetical protein AMK59_7915, partial [Oryctes borbonicus]) HSP 1 Score: 167.162 bits (422), Expect = 1.358e-49 Identity = 105/145 (72.41%), Postives = 116/145 (80.00%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLPGA--GPGIGRAAGXGMIPPGGPGGPAPGLAGPVRGXGGPXPQMMXPGGM-AVSAPPQM 142
+RI LQD RTFIGTFKAFDKHMN+I+GDCEEFRK++PKN + VEREEKRVLG VLLRGE+IVS+TVEGPPP EEG+PRVP+PGA GPGIGRAAG GM P G GG GL GPVRG GGP Q+M PGG VSAPPQM
Sbjct: 17 VRITLQDSRTFIGTFKAFDKHMNMILGDCEEFRKIKPKN------SKVEREEKRVLGFVLLRGESIVSLTVEGPPPPEEGLPRVPIPGAAPGPGIGRAAGRGM--PAGIGGVPVGLQGPVRGIGGPSQQVMTPGGRGQVSAPPQM 153
BLAST of EMLSAG00000000402 vs. nr
Match: gi|260819010|ref|XP_002604675.1| (hypothetical protein BRAFLDRAFT_94837 [Branchiostoma floridae] >gi|229290003|gb|EEN60686.1| hypothetical protein BRAFLDRAFT_94837 [Branchiostoma floridae]) HSP 1 Score: 167.933 bits (424), Expect = 1.547e-49 Identity = 100/144 (69.44%), Postives = 111/144 (77.08%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRV--PLPGAGPGIGRAAGXGMIPPGGPGGPAPGLAGPVRGXGGPXPQMMXPGG-MAVSAPPQ 141
MR+ LQD R FIGTFKAFDKHMNLI+ DC+EFRK+RPK+ + EREEKRVLGLVLLRGENIVSMTVEGPPPA+EG+ RV P G GPG+GRAAG G+ GP PA GLAGPVRG GGP Q+M P G AVSAPPQ
Sbjct: 17 MRVTLQDSRVFIGTFKAFDKHMNLILVDCDEFRKIRPKSQKQE-----EREEKRVLGLVLLRGENIVSMTVEGPPPADEGVARVPIPGAGPGPGMGRAAGRGVANVAGPSAPA-GLAGPVRGVGGPSQQVMTPQGRAAVSAPPQ 154
BLAST of EMLSAG00000000402 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold2255_size18018-processed-gene-0.0 (protein:Tk05957 transcript:snap_masked-scaffold2255_size18018-processed-gene-0.0-mRNA-1 annotation:"rna-binding protein") HSP 1 Score: 202.601 bits (514), Expect = 1.554e-67 Identity = 111/143 (77.62%), Postives = 120/143 (83.92%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGPPPAEEGMPRVPLPGA-GPGIGRAAGXGMIPPGGPGGPAPGLAGPVRGXGGPXPQMMXPGGMAVSAPPQM 142
MR+ILQD RTFIGTFKAFDKHMNLI+GDCEEFRKL+PK+ EREEKRVLGLVLLRGENIVSMTVEGPPP++EGMPRVP+PGA GPG+GRAAG G +P GG APGLAGPVRG GGP P MM PGGMA SAPPQM
Sbjct: 17 MRVILQDSRTFIGTFKAFDKHMNLILGDCEEFRKLKPKSAKS-----TEREEKRVLGLVLLRGENIVSMTVEGPPPSDEGMPRVPIPGAGGPGLGRAAGRG-VP---MGGAAPGLAGPVRGVGGPAPSMMAPGGMAASAPPQM 150
BLAST of EMLSAG00000000402 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold349_size200065-snap-gene-1.25 (protein:Tk10552 transcript:maker-scaffold349_size200065-snap-gene-1.25-mRNA-1 annotation:"lsm domain-containing protein 1") HSP 1 Score: 45.8246 bits (107), Expect = 9.111e-7 Identity = 25/74 (33.78%), Postives = 39/74 (52.70%), Query Frame = 0
Query: 1 MRIILQDXRTFIGTFKAFDKHMNLIMGDCEEFRKLRPKNVAKGCPAPVEREEKRVLGLVLLRGENIVSMTVEGP 74
++I+L D R +G F D++ N+I+G C E P E E R+LGL ++ G +IVS+ V+ P
Sbjct: 122 LKIVLSDGRILVGVFLCTDQNANVILGSCTE-----------STPEQEEGSEPRILGLAMVPGRHIVSVHVDEP 184 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000402 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 25
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BLAST of EMLSAG00000000402 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 8
BLAST of EMLSAG00000000402 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000000402 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 15
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BLAST of EMLSAG00000000402 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 11
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BLAST of EMLSAG00000000402 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000000402 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 2
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1063:89051..89620+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000402-683168 ID=EMLSAG00000000402-683168|Name=EMLSAG00000000402|organism=Lepeophtheirus salmonis|type=gene|length=570bp|location=Sequence derived from alignment at LSalAtl2s1063:89051..89620+ (Lepeophtheirus salmonis)back to top Add to Basket
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