EMLSAG00000000422, EMLSAG00000000422-683188 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000422 vs. C. finmarchicus
Match: gi|592955870|gb|GAXK01002686.1| (TSA: Calanus finmarchicus comp1011463_c0_seq4 transcribed RNA sequence) HSP 1 Score: 32.3426 bits (72), Expect = 3.815e+0 Identity = 22/75 (29.33%), Postives = 33/75 (44.00%), Query Frame = 0 Query: 108 IFQNIKREKDTSNALRFDLNNDIPSTSSSNLKEIFDSLNTKKQTDRIIVDRPDLLTISEFLPGPVIVTNNQDKIL 182 QN+ EK S FD +++ + + K IFD Q + D D+L F PVI+ N+D+ L Sbjct: 872 CLQNLDAEKIVSQVRVFDHEDNVMQNAPNPWKPIFDGHFLSTQVPFLSSDPLDILEDGNFSDIPVIIGENKDEGL 1096
BLAST of EMLSAG00000000422 vs. C. finmarchicus
Match: gi|592955871|gb|GAXK01002685.1| (TSA: Calanus finmarchicus comp1011463_c0_seq3 transcribed RNA sequence) HSP 1 Score: 32.3426 bits (72), Expect = 3.901e+0 Identity = 22/75 (29.33%), Postives = 33/75 (44.00%), Query Frame = 0 Query: 108 IFQNIKREKDTSNALRFDLNNDIPSTSSSNLKEIFDSLNTKKQTDRIIVDRPDLLTISEFLPGPVIVTNNQDKIL 182 QN+ EK S FD +++ + + K IFD Q + D D+L F PVI+ N+D+ L Sbjct: 959 CLQNLDAEKIVSQVRVFDHEDNVMQNAPNPWKPIFDGHFLSTQVPFLSSDPLDILEDGNFSDIPVIIGENKDEGL 1183
BLAST of EMLSAG00000000422 vs. C. finmarchicus
Match: gi|592774249|gb|GAXK01180319.1| (TSA: Calanus finmarchicus comp1632033_c0_seq1 transcribed RNA sequence) HSP 1 Score: 30.8018 bits (68), Expect = 4.522e+0 Identity = 17/35 (48.57%), Postives = 22/35 (62.86%), Query Frame = 0 Query: 25 SVFINPDSPFLVKQTANGEILLRKSPTFVSSRPTF 59 SVFI+ L +T N +ILLR SP+ S+RP F Sbjct: 110 SVFISMLPTCLTSKTLNWKILLRSSPSI*STRPNF 214
BLAST of EMLSAG00000000422 vs. C. finmarchicus
Match: gi|592955872|gb|GAXK01002684.1| (TSA: Calanus finmarchicus comp1011463_c0_seq2 transcribed RNA sequence) HSP 1 Score: 31.9574 bits (71), Expect = 5.127e+0 Identity = 22/75 (29.33%), Postives = 33/75 (44.00%), Query Frame = 0 Query: 108 IFQNIKREKDTSNALRFDLNNDIPSTSSSNLKEIFDSLNTKKQTDRIIVDRPDLLTISEFLPGPVIVTNNQDKIL 182 QN+ EK S FD +++ + + K IFD Q + D D+L F PVI+ N+D+ L Sbjct: 872 CLQNLDAEKIVSQVRVFDHEDNVMQNAPNPWKPIFDGHFLSTQVPFLSSDPLDILEDGNFSDIPVIIGENKDEGL 1096
BLAST of EMLSAG00000000422 vs. C. finmarchicus
Match: gi|592955873|gb|GAXK01002683.1| (TSA: Calanus finmarchicus comp1011463_c0_seq1 transcribed RNA sequence) HSP 1 Score: 31.9574 bits (71), Expect = 5.170e+0 Identity = 22/75 (29.33%), Postives = 33/75 (44.00%), Query Frame = 0 Query: 108 IFQNIKREKDTSNALRFDLNNDIPSTSSSNLKEIFDSLNTKKQTDRIIVDRPDLLTISEFLPGPVIVTNNQDKIL 182 QN+ EK S FD +++ + + K IFD Q + D D+L F PVI+ N+D+ L Sbjct: 959 CLQNLDAEKIVSQVRVFDHEDNVMQNAPNPWKPIFDGHFLSTQVPFLSSDPLDILEDGNFSDIPVIIGENKDEGL 1183
BLAST of EMLSAG00000000422 vs. L. salmonis peptides
Match: EMLSAP00000000422 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1067:99048:103528:-1 gene:EMLSAG00000000422 transcript:EMLSAT00000000422 description:"augustus_masked-LSalAtl2s1067-processed-gene-0.2") HSP 1 Score: 874.389 bits (2258), Expect = 0.000e+0 Identity = 437/437 (100.00%), Postives = 437/437 (100.00%), Query Frame = 0 Query: 1 MNINLQAMMFIIMMGLFHFANSKTSVFINPDSPFLVKQTANGEILLRKSPTFVSSRPTFNALNELLDLYLNNQTFINSRTSTERPPYYPIFSSTTHGPFFTFSSTDFIFQNIKREKDTSNALRFDLNNDIPSTSSSNLKEIFDSLNTKKQTDRIIVDRPDLLTISEFLPGPVIVTNNQDKILDSSDSMNTIIPGATISSTSTMTTSTTRRGVISSAFSLAPLIXPDSIEIVPEITTAKTTTTTTTTTTTTTMMTTTTTEPIITTESSQFGLSSIFSMISHQMEFISNSFLQTKSSTTSSESALTQSSTSNNGNGLDASAALIPAVLGGVIGVGLFVSELAKSSSTSASKKRRRGGGPPRRTYAQTKAVEFLRKQQQEKQDKRHKKPFLPRQRKSSNALRRSGITQFVASDARRNPMEQGGDNFYYDYFRSDSFVNTN 437 MNINLQAMMFIIMMGLFHFANSKTSVFINPDSPFLVKQTANGEILLRKSPTFVSSRPTFNALNELLDLYLNNQTFINSRTSTERPPYYPIFSSTTHGPFFTFSSTDFIFQNIKREKDTSNALRFDLNNDIPSTSSSNLKEIFDSLNTKKQTDRIIVDRPDLLTISEFLPGPVIVTNNQDKILDSSDSMNTIIPGATISSTSTMTTSTTRRGVISSAFSLAPLIXPDSIEIVPEITTAKTTTTTTTTTTTTTMMTTTTTEPIITTESSQFGLSSIFSMISHQMEFISNSFLQTKSSTTSSESALTQSSTSNNGNGLDASAALIPAVLGGVIGVGLFVSELAKSSSTSASKKRRRGGGPPRRTYAQTKAVEFLRKQQQEKQDKRHKKPFLPRQRKSSNALRRSGITQFVASDARRNPMEQGGDNFYYDYFRSDSFVNTN Sbjct: 1 MNINLQAMMFIIMMGLFHFANSKTSVFINPDSPFLVKQTANGEILLRKSPTFVSSRPTFNALNELLDLYLNNQTFINSRTSTERPPYYPIFSSTTHGPFFTFSSTDFIFQNIKREKDTSNALRFDLNNDIPSTSSSNLKEIFDSLNTKKQTDRIIVDRPDLLTISEFLPGPVIVTNNQDKILDSSDSMNTIIPGATISSTSTMTTSTTRRGVISSAFSLAPLIXPDSIEIVPEITTAKTTTTTTTTTTTTTMMTTTTTEPIITTESSQFGLSSIFSMISHQMEFISNSFLQTKSSTTSSESALTQSSTSNNGNGLDASAALIPAVLGGVIGVGLFVSELAKSSSTSASKKRRRGGGPPRRTYAQTKAVEFLRKQQQEKQDKRHKKPFLPRQRKSSNALRRSGITQFVASDARRNPMEQGGDNFYYDYFRSDSFVNTN 437 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000422 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000000422 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 5
BLAST of EMLSAG00000000422 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000000422 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000422 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000000422 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000000422 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1067:99048..103528- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000422-683188 ID=EMLSAG00000000422-683188|Name=EMLSAG00000000422|organism=Lepeophtheirus salmonis|type=gene|length=4481bp|location=Sequence derived from alignment at LSalAtl2s1067:99048..103528- (Lepeophtheirus salmonis)back to top Add to Basket
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