EMLSAG00000000442, EMLSAG00000000442-683208 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000442 vs. GO
Match: - (symbol:SSR2 "Translocon-associated protein subunit beta" species:9606 "Homo sapiens" [GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] InterPro:IPR008856 Pfam:PF05753 GO:GO:0005783 GO:GO:0016021 EMBL:AL355388 PANTHER:PTHR12861 HGNC:HGNC:11324 ChiTaRS:SSR2 ProteinModelPortal:E9PQJ7 Ensembl:ENST00000496742 NextBio:35504416 ArrayExpress:E9PQJ7 Bgee:E9PQJ7 Uniprot:E9PQJ7) HSP 1 Score: 45.4394 bits (106), Expect = 7.878e-6 Identity = 27/66 (40.91%), Postives = 38/66 (57.58%), Query Frame = 0 Query: 5 LYSMVVLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQV 70 L S VVL LF + + EG A LL SK + N+Y VEG D+ ++Y IYN+G + A+ V + Sbjct: 3 LLSFVVLALF-AVTQAEEG--------ARLLASKSLLNRYAVEGRDLTLQYNIYNVGSRLALPVHL 59
BLAST of EMLSAG00000000442 vs. GO
Match: - (symbol:SSR2 "Translocon-associated protein subunit beta" species:9606 "Homo sapiens" [GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] InterPro:IPR008856 Pfam:PF05753 GO:GO:0005783 GO:GO:0016021 EMBL:AL355388 PANTHER:PTHR12861 HGNC:HGNC:11324 ChiTaRS:SSR2 Ensembl:ENST00000473699 NextBio:35503875 ArrayExpress:E9PNP2 Bgee:E9PNP2 Uniprot:E9PNP2) HSP 1 Score: 42.743 bits (99), Expect = 5.914e-5 Identity = 25/68 (36.76%), Postives = 39/68 (57.35%), Query Frame = 0 Query: 5 LYSMVVLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKE 72 L S VVL LF + + EG A LL SK + N+Y VEG D+ ++Y IYN+G + + ++++ Sbjct: 3 LLSFVVLALF-AVTQAEEG--------ARLLASKSLLNRYAVEGRDLTLQYNIYNVGSRHVHEEKLRQ 61
BLAST of EMLSAG00000000442 vs. C. finmarchicus
Match: gi|592778023|gb|GAXK01176545.1| (TSA: Calanus finmarchicus comp3365_c2_seq1 transcribed RNA sequence) HSP 1 Score: 158.688 bits (400), Expect = 8.435e-47 Identity = 75/134 (55.97%), Postives = 98/134 (73.13%), Query Frame = 0 Query: 32 AHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHIYQTAC 165 A +LL+KQ+ NKYLVEGMDIVVKY ++N+G+ A +V+V + GF + FDVVSG +KL+R+ P SN++HT+VVRPKKFGYF F AEV E+ I TG SSDPG GVII+ ++YD+QFSAH+ A Sbjct: 361 ARILLAKQIHNKYLVEGMDIVVKYNLFNVGDTAATNVKVVDNGFRVEDFDVVSGQTKYKLERVAPGSNSSHTIVVRPKKFGYFNFTAAEVTYNA--ESSGAILTGLSSDPGQGVIIAARDYDRQFSAHLLDWAA 756
BLAST of EMLSAG00000000442 vs. C. finmarchicus
Match: gi|592758943|gb|GAXK01195470.1| (TSA: Calanus finmarchicus comp8935159_c0_seq1 transcribed RNA sequence) HSP 1 Score: 145.976 bits (367), Expect = 1.115e-42 Identity = 75/156 (48.08%), Postives = 103/156 (66.03%), Query Frame = 0 Query: 5 LYSMVVLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHI 160 L+ + VL L S++ +DAS PA LL SKQ+ NKYLVE MD+++KY+++NIG A+DVQV + F D F+VV G F +DRIPP ++ TH +V+RP KFGYF F AEV S++A + Q G SS+PG G I+ K YD++FS H+ Sbjct: 50 LFKICVLVL--TVSTTLGSEDAS---PAKLLFSKQILNKYLVEDMDVLIKYSLFNIGGSSALDVQVSDSTFSPDDFEVVGGQMKFSVDRIPPGADATHVVVLRPTKFGYFNFTAAEVSYLPSEDATE-AQIGYSSEPGQGAIVPFKEYDRKFSPHL 499
BLAST of EMLSAG00000000442 vs. L. salmonis peptides
Match: EMLSAP00000000442 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1068:97826:99509:1 gene:EMLSAG00000000442 transcript:EMLSAT00000000442 description:"augustus_masked-LSalAtl2s1068-processed-gene-1.2") HSP 1 Score: 335.109 bits (858), Expect = 2.029e-118 Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0 Query: 1 MKLILYSMVVLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHIYQTACCF 167 MKLILYSMVVLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHIYQTACCF Sbjct: 1 MKLILYSMVVLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHIYQTACCF 167
BLAST of EMLSAG00000000442 vs. L. salmonis peptides
Match: EMLSAP00000004472 (pep:novel supercontig:LSalAtl2s:LSalAtl2s232:350320:360099:1 gene:EMLSAG00000004472 transcript:EMLSAT00000004472 description:"snap_masked-LSalAtl2s232-processed-gene-3.2") HSP 1 Score: 95.9005 bits (237), Expect = 6.739e-26 Identity = 44/65 (67.69%), Postives = 52/65 (80.00%), Query Frame = 0 Query: 52 VVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXF 116 +VKY IYNIGEQPAVD QVKE+ PEDS+D SG+ SF L IPP+S NTHTL+V+ KKFG+F F Sbjct: 1 MVKYGIYNIGEQPAVDAQVKEICSPEDSYDAASGNTSFNLYHIPPYSYNTHTLIVKLKKFGFFSF 65
BLAST of EMLSAG00000000442 vs. L. salmonis peptides
Match: EMLSAP00000003648 (pep:novel supercontig:LSalAtl2s:LSalAtl2s199:123768:144571:-1 gene:EMLSAG00000003648 transcript:EMLSAT00000003648 description:"snap_masked-LSalAtl2s199-processed-gene-1.3") HSP 1 Score: 67.0106 bits (162), Expect = 9.165e-15 Identity = 32/50 (64.00%), Postives = 35/50 (70.00%), Query Frame = 0 Query: 86 HASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQT 135 SFKLDRI PHS NT TL + PKKF Y F +V+ RVSDE DDIIQT Sbjct: 60 QTSFKLDRILPHSENTLTLFLSPKKFEYLSFTSFKVKYRVSDEVDDIIQT 109
BLAST of EMLSAG00000000442 vs. SwissProt
Match: gi|1174451|sp|P43308.1|SSRB_HUMAN (RecName: Full=Translocon-associated protein subunit beta; Short=TRAP-beta; AltName: Full=Signal sequence receptor subunit beta; Short=SSR-beta; Flags: Precursor) HSP 1 Score: 120.553 bits (301), Expect = 8.446e-34 Identity = 64/161 (39.75%), Postives = 94/161 (58.39%), Query Frame = 0 Query: 5 LYSMVVLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHIYQTAC 165 L S VVL LF + + EG A LL SK + N+Y VEG D+ ++Y IYN+G A+DV++ + FP + F +VSG + K DRI P SN +HT+V+RP K GYF F A + ++ +I G++S PG G I++ + +D++FS H A Sbjct: 3 LLSFVVLALF-AVTQAEEG--------ARLLASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQEDGPVVI--GSTSAPGQGGILAQREFDRRFSPHFLDWAA 152
BLAST of EMLSAG00000000442 vs. SwissProt
Match: gi|83308967|sp|Q5E9E4.1|SSRB_BOVIN (RecName: Full=Translocon-associated protein subunit beta; Short=TRAP-beta; AltName: Full=Signal sequence receptor subunit beta; Short=SSR-beta; Flags: Precursor) HSP 1 Score: 117.472 bits (293), Expect = 1.394e-32 Identity = 64/165 (38.79%), Postives = 96/165 (58.18%), Query Frame = 0 Query: 1 MKLILYSMVVLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHIYQTAC 165 M+L+ ++ VL LF + + EG A LL SK + N+Y VEG D+ ++Y IYN+G A+DV++ + FP + F +VSG + K DRI P SN +HT+V+RP K GYF F A V ++ +I G +S PG G I++ + +D++FS H A Sbjct: 1 MRLLAFA--VLALF-AVTQAEEG--------ARLLASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATVTYLAQEDGPVVI--GFTSAPGQGGILAQREFDRRFSPHFLDWAA 152
BLAST of EMLSAG00000000442 vs. SwissProt
Match: gi|134931|sp|P23438.1|SSRB_CANFA (RecName: Full=Translocon-associated protein subunit beta; Short=TRAP-beta; AltName: Full=Glycoprotein 25H; Short=gp25H; AltName: Full=Signal sequence receptor subunit beta; Short=SSR-beta; Flags: Precursor) HSP 1 Score: 117.087 bits (292), Expect = 1.675e-32 Identity = 64/161 (39.75%), Postives = 93/161 (57.76%), Query Frame = 0 Query: 5 LYSMVVLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHIYQTAC 165 L + V+L LF S + EG A LL SK + N+Y VEG D+ ++Y IYN+G A+DV++ + FP + F +VSG + K DRI P SN +HT+V+RP K GYF F A V ++ +I G +S PG G I++ + +D++FS H A Sbjct: 3 LLASVLLALF-AVSHAEEG--------ARLLASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATVTYLAQEDGPVVI--GFTSAPGQGGILAQREFDRRFSPHFLDWAA 152
BLAST of EMLSAG00000000442 vs. SwissProt
Match: gi|71162391|sp|Q9CPW5.1|SSRB_MOUSE (RecName: Full=Translocon-associated protein subunit beta; Short=TRAP-beta; AltName: Full=Signal sequence receptor subunit beta; Short=SSR-beta; Flags: Precursor) HSP 1 Score: 116.316 bits (290), Expect = 3.004e-32 Identity = 55/134 (41.04%), Postives = 83/134 (61.94%), Query Frame = 0 Query: 32 AHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHIYQTAC 165 A LL SK + N+Y VEG D+ ++Y IYN+G A+DV++ + FP + F +VSG + K DRI P SN +HT+V+RP K GYF F A + ++ +I G++S PG G I++ + +D++FS H A Sbjct: 21 ARLLASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQEDGPVVI--GSTSAPGQGGILAQREFDRRFSPHFLDWAA 152
BLAST of EMLSAG00000000442 vs. SwissProt
Match: gi|74965890|sp|Q22169.1|SSRB_CAEEL (RecName: Full=Translocon-associated protein subunit beta; Flags: Precursor) HSP 1 Score: 95.1301 bits (235), Expect = 5.710e-24 Identity = 47/132 (35.61%), Postives = 77/132 (58.33%), Query Frame = 0 Query: 27 SGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEV-GFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFS 157 + ++ A +L KQ + Y VE MD V++Y +YN+G++PA V + + FP +SFD+V G ++IP SN TH++V+RP+ FG+F + A+V +E + T PG G I + YD++F+ Sbjct: 20 TQTRDAFILAHKQPLSTYAVENMDFVLEYGLYNVGDKPAQKVTIDDRHSFPTNSFDIVKGLLFVHFEQIPAGSNVTHSVVIRPRAFGFFNYTAAQVTYYTDNENHHVTLTNT---PGEGYIYRQREYDRRFA 148
BLAST of EMLSAG00000000442 vs. SwissProt
Match: gi|182691581|sp|Q54VI6.2|SSRB_DICDI (RecName: Full=Translocon-associated protein subunit beta; Short=TRAP-beta; AltName: Full=Signal sequence receptor subunit beta; Short=SSR-beta; Flags: Precursor) HSP 1 Score: 55.8398 bits (133), Expect = 5.934e-9 Identity = 37/136 (27.21%), Postives = 66/136 (48.53%), Query Frame = 0 Query: 32 AHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHIYQTACCF 167 A LL K++ +V G ++ +++ IYN+G +PA D+ + F F+ VSG + K + + P+S L V PKK G + + R + + + + A+S G + S +Y+K+ S I + F Sbjct: 24 AELLFHKKIVEGPVV-GKELPIQFIIYNVGSEPAYDISFIDNDFSNAEFEFVSGSSEGKWETLAPNSQVQTNLTVIPKKSGIYSLTSTVLNYRKTQTSSEFTVSSAASYSGM-YVESQADYEKRTSLLIKEWITFF 157
BLAST of EMLSAG00000000442 vs. Select Arthropod Genomes
Match: XP_623954.1 (PREDICTED: translocon-associated protein subunit beta [Apis mellifera]) HSP 1 Score: 150.214 bits (378), Expect = 1.292e-45 Identity = 73/162 (45.06%), Postives = 107/162 (66.05%), Query Frame = 0 Query: 4 ILYSMVVLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHIYQTAC 165 I+++ + +FT Y+ E A LL+SKQ+ NKYLVE MDIV+KY +YNIG A++V++ + F D F VSG + ++DR+PP++N +HT++VRP+KFGYF F AEV R ++A +Q ASS+PG VI+S ++YDKQFS+H+ A Sbjct: 5 IIFAALAAFVFTTYAEEEEET-------ARLLISKQLLNKYLVENMDIVIKYTVYNIGSAAALEVEITDNSFHPDHFTHVSGELNARIDRVPPYTNVSHTVIVRPRKFGYFNFTSAEVLYRRKEDAPS-LQFAASSEPGEAVIVSFRDYDKQFSSHVVDWAA 158
BLAST of EMLSAG00000000442 vs. Select Arthropod Genomes
Match: EFX79793.1 (hypothetical protein DAPPUDRAFT_230994 [Daphnia pulex]) HSP 1 Score: 142.124 bits (357), Expect = 1.603e-42 Identity = 70/148 (47.30%), Postives = 95/148 (64.19%), Query Frame = 0 Query: 13 LFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHI 160 L ++ +T G + + PA LL SKQ+ NKYLVEGMDIV+KY+++N+G A+DVQV + F F+VV G +DRI P SN TH +V+RP KFGYF F AEV S+ A + + G SS+PG G I+ K YD++FS H+ Sbjct: 9 LLVVFAVATTGNEEA--TPAKLLFSKQILNKYLVEGMDIVIKYSLFNVGGTAALDVQVADNTFGPQDFEVVGGQLKVTIDRIAPGSNATHVVVIRPSKFGYFNFTAAEVTYLPSENAAEAL-VGLSSEPGQGAIVPFKEYDRKFSPHL 153
BLAST of EMLSAG00000000442 vs. Select Arthropod Genomes
Match: EEB15815.1 (translocon-associated protein subunit beta precursor, putative [Pediculus humanus corporis]) HSP 1 Score: 139.813 bits (351), Expect = 1.062e-41 Identity = 66/151 (43.71%), Postives = 100/151 (66.23%), Query Frame = 0 Query: 10 VLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHI 160 +L L G SS + S A LL+SKQ+ NKYLVE MDI++KY +YN+G+ A++V + + F +SF ++ G S K+DRIPP +N TH V+R K+GY+ F AEV +VS+E +Q +S+PG G+I++ ++YDK+FS+H+ Sbjct: 4 ILLLILGISSIVKCSSEDDSSGARLLVSKQILNKYLVEDMDILLKYTLYNVGKNAAINVVLSDQSFHPESFVLMGGQLSVKIDRIPPGTNATHVAVIRSTKYGYYNFTAAEVSYKVSEEGA--LQYAVTSEPGEGLIVAFRDYDKKFSSHV 152
BLAST of EMLSAG00000000442 vs. Select Arthropod Genomes
Match: gb|EFA10929.1| (Translocon-associated protein subunit beta-like Protein [Tribolium castaneum]) HSP 1 Score: 134.806 bits (338), Expect = 1.113e-39 Identity = 63/129 (48.84%), Postives = 90/129 (69.77%), Query Frame = 0 Query: 33 HLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHIY 161 LL+SKQ+ N+YLVE DI VKY +YN+G AV VQ+ + GF ++F+VV GH S K +RI P +N +H +VVRPK++GYF F AE + SD + ++Q SS+PG G II+ ++YDK+FS+H + Sbjct: 26 RLLVSKQILNRYLVENKDIEVKYTLYNVGTSAAVGVQLVDNGFHPEAFEVVGGHLSAKFERILPQTNVSHVVVVRPKRYGYFNFTSAEATYKNSDAS--VVQVSLSSEPGEGGIIAFRDYDKKFSSHTW 152
BLAST of EMLSAG00000000442 vs. Select Arthropod Genomes
Match: AAF49532.2 (signal sequence receptor beta [Drosophila melanogaster]) HSP 1 Score: 132.494 bits (332), Expect = 1.019e-38 Identity = 62/130 (47.69%), Postives = 89/130 (68.46%), Query Frame = 0 Query: 32 AHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHIY 161 A LL+SKQ+ NKYLVE D++V+Y I+N+G A V++ + GF ++FDVV G + +DRI P +N TH LVVRPK FGYF F AEV + +E++ +Q SS+PG G I++L Y+K+FS+H + Sbjct: 26 ARLLVSKQILNKYLVEKSDLLVRYTIFNVGSGAATKVRLVDSGFHPEAFDVVGGQPTAVVDRIAPQTNFTHVLVVRPKAFGYFNFTAAEVSYKAVEESET-LQLAVSSEPGEGGIVNLNEYNKRFSSHFF 154
BLAST of EMLSAG00000000442 vs. Select Arthropod Genomes
Match: gb|EEC17421.1| (signal sequence receptor beta [Ixodes scapularis]) HSP 1 Score: 130.954 bits (328), Expect = 3.688e-38 Identity = 64/129 (49.61%), Postives = 91/129 (70.54%), Query Frame = 0 Query: 32 AHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHI 160 A LL+ K++ N+YLVEG DI+V Y IYN+G A+DV+V + F E F+VVSG FKLDR+PP SN THT VVR K+G F F AEV R S+++ + +Q +++PG G II++K++D++FS H+ Sbjct: 26 ARLLVQKRILNRYLVEGRDIIVDYNIYNVGGSAALDVKVVDNSFGEGDFEVVSGLLKFKLDRLPPGSNVTHTAVVRAIKYGRFNFTSAEVTYRSSEDSKE-LQFAHTAEPGEGGIIAVKDFDRKFSPHV 153
BLAST of EMLSAG00000000442 vs. Select Arthropod Genomes
Match: EDO63746.1 (AGAP005861-PA [Anopheles gambiae str. PEST]) HSP 1 Score: 127.872 bits (320), Expect = 6.020e-37 Identity = 62/134 (46.27%), Postives = 89/134 (66.42%), Query Frame = 0 Query: 26 ASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAH 159 A+ A LL+SK + NKYLVE DIVVKY +YN+G PAV+V++ + GF + F+VV G + +DRI P +N TH +VVRPK++GY F AEV +++A + Q SS+PG G I++ ++KQFS+H Sbjct: 20 ANEENTARLLVSKHILNKYLVEARDIVVKYTLYNVGSGPAVNVRLVDNGFHPEVFEVVGGQLTASIDRIAPQTNVTHIVVVRPKQYGYLNFTAAEVNYLATEDATE-PQFSISSEPGEGAIVAEAQFNKQFSSH 152
BLAST of EMLSAG00000000442 vs. Select Arthropod Genomes
Match: EAL39950.2 (AGAP005861-PB [Anopheles gambiae str. PEST]) HSP 1 Score: 127.872 bits (320), Expect = 6.020e-37 Identity = 62/134 (46.27%), Postives = 89/134 (66.42%), Query Frame = 0 Query: 26 ASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAH 159 A+ A LL+SK + NKYLVE DIVVKY +YN+G PAV+V++ + GF + F+VV G + +DRI P +N TH +VVRPK++GY F AEV +++A + Q SS+PG G I++ ++KQFS+H Sbjct: 20 ANEENTARLLVSKHILNKYLVEARDIVVKYTLYNVGSGPAVNVRLVDNGFHPEVFEVVGGQLTASIDRIAPQTNVTHIVVVRPKQYGYLNFTAAEVNYLATEDATE-PQFSISSEPGEGAIVAEAQFNKQFSSH 152
BLAST of EMLSAG00000000442 vs. Select Arthropod Genomes
Match: gb|KPM06334.1| (translocon-associated protein subunit beta-like protein [Sarcoptes scabiei]) HSP 1 Score: 127.487 bits (319), Expect = 1.025e-36 Identity = 61/139 (43.88%), Postives = 89/139 (64.03%), Query Frame = 0 Query: 29 SKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKK--FGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHIYQTAC 165 S A +L KQV NKYLVE DIV+ Y ++N+G A++VQ+ + F FDV+SG A F + RI PH+N T+T+V+RPK+ +G F F E+ D ++ +++G +S+PG G I+SLK +DK+FS H Y A Sbjct: 29 SSKARILAEKQVLNKYLVESKDIVINYNLFNVGSSSAINVQISDATFSLAHFDVISGSAKFTIPRIAPHTNTTNTVVIRPKEGVWGRFNFTAGELTYYSED--NNELKSGFTSEPGEGFIVSLKEFDKRFSPHYYDWAT 165
BLAST of EMLSAG00000000442 vs. Select Arthropod Genomes
Match: gb|KFM56656.1| (Translocon-associated protein subunit beta, partial [Stegodyphus mimosarum]) HSP 1 Score: 65.0846 bits (157), Expect = 1.788e-13 Identity = 30/76 (39.47%), Postives = 50/76 (65.79%), Query Frame = 0 Query: 90 KLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHIYQTAC 165 KLDR+ P +N +HT+V+RPK+ G + F AEV S+++ + +Q S++PG V+I K++D++FS H+ A Sbjct: 2 KLDRLGPGANISHTVVLRPKQTGIYNFTAAEVTYYPSEDSKE-VQVSFSTEPGEAVVIQAKDFDRKFSPHMTDWAA 76
BLAST of EMLSAG00000000442 vs. nr
Match: gi|942308859|gb|JAN36362.1| (Translocon-associated protein subunit beta [Daphnia magna]) HSP 1 Score: 148.288 bits (373), Expect = 8.363e-42 Identity = 71/151 (47.02%), Postives = 98/151 (64.90%), Query Frame = 0 Query: 17 YSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHIYQTACCF 167 ++ +T G + + PA LL SKQ+ NKYLVEGMDIV+KY+++N+G A+DVQV + F F+VV G F +DRIPP SN TH +V+RP K+GYF F AEV S++A + + G SS+PG G I+ K YD++FS H+ C Sbjct: 13 FAVATTGNEEA--TPAKLLFSKQILNKYLVEGMDIVIKYSLFNVGGTAALDVQVADNTFGPQDFEVVGGQLKFTIDRIPPGSNATHVVVIRPSKYGYFNFTAAEVSYLPSEDAAEAL-VGLSSEPGQGAIVPFKEYDRKFSPHLVVIELCL 160
BLAST of EMLSAG00000000442 vs. nr
Match: gi|943965671|ref|XP_014364962.1| (PREDICTED: translocon-associated protein subunit beta [Papilio machaon]) HSP 1 Score: 147.132 bits (370), Expect = 9.520e-42 Identity = 68/134 (50.75%), Postives = 94/134 (70.15%), Query Frame = 0 Query: 32 AHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHIYQTAC 165 A LL+SKQV NKYLVE MDI+VKY +YN+G PAVDV++ + GF + F+VV G + ++DRIPP +N +H + VR +FGYF F AEV R S+++ D +Q SS PG G I++ K+YD++FS+HI A Sbjct: 25 ARLLVSKQVLNKYLVENMDILVKYTLYNVGTAPAVDVKLVDNGFHPEVFEVVGGQLTAEIDRIPPQTNVSHVVTVRSNRFGYFNFTAAEVTYRASEDSTD-VQYSISSSPGEGAIVAFKDYDRKFSSHILDWAA 157
BLAST of EMLSAG00000000442 vs. nr
Match: gi|1058067960|gb|JAS37641.1| (hypothetical protein g.13581 [Cuerna arida]) HSP 1 Score: 146.747 bits (369), Expect = 1.463e-41 Identity = 70/160 (43.75%), Postives = 106/160 (66.25%), Query Frame = 0 Query: 1 MKLILYSMVVLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHI 160 M ++ ++ LGL G + + + +G A LL+SKQ+ NKYLVE MDI+VKY +YNIG A++V + + F ++F VV G + KLDRI P +N +H +V+RP K+GY+ F AEV + S++A+ +Q +S+PG GVII+ K+YDK+FS H+ Sbjct: 1 MMKVISCLLFLGLVWGCVCTEQQQAENG---ARLLISKQILNKYLVENMDIIVKYTLYNIGTSAALNVVLSDTSFHSEAFTVVGGQLTVKLDRIAPATNVSHVVVIRPTKYGYYNFTAAEVNYKPSEDANR-VQVAVTSEPGEGVIIAFKDYDKKFSPHL 156
BLAST of EMLSAG00000000442 vs. nr
Match: gi|383856498|ref|XP_003703745.1| (PREDICTED: translocon-associated protein subunit beta [Megachile rotundata] >gi|805790603|ref|XP_012141783.1| PREDICTED: translocon-associated protein subunit beta [Megachile rotundata]) HSP 1 Score: 146.362 bits (368), Expect = 1.548e-41 Identity = 66/132 (50.00%), Postives = 95/132 (71.97%), Query Frame = 0 Query: 34 LLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHIYQTAC 165 LL+SKQ+ NKYLVE MDIV+KY +YN+G A++V++ + F D F VSG + ++DR+PP++N +HT+VVRP+KFGYF F AEV R ++A +Q ASS+PG +I+S ++YDKQFS+H+ A Sbjct: 28 LLISKQLLNKYLVENMDIVIKYTVYNVGNAAALEVEITDNSFHPDHFTHVSGEINARIDRVPPYTNVSHTVVVRPRKFGYFNFTSAEVLYRRKEDAPR-LQFAASSEPGEAIIVSFRDYDKQFSSHVVDWAA 158
BLAST of EMLSAG00000000442 vs. nr
Match: gi|1058026381|gb|JAS16852.1| (hypothetical protein g.12832 [Clastoptera arizonana]) HSP 1 Score: 146.362 bits (368), Expect = 1.805e-41 Identity = 72/160 (45.00%), Postives = 107/160 (66.88%), Query Frame = 0 Query: 1 MKLILYSMVVLGLFTGYSSSTEGKDASGSKPAHLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHI 160 M++ L + +LG F + G +A+ A LL+SKQ+ NKYLVE MDIVVKY +YNIG A+ V + + F D+F+VV G + K+DRIPP +N +H +V++P K GY+ F AEV R++++A+ +Q +S+PG GVII+ K+YDK+FS H+ Sbjct: 1 MRIYLSVLCLLGCFY----NVFGNEATAESGARLLVSKQILNKYLVEEMDIVVKYTLYNIGSSAALGVVLSDNSFNPDAFNVVGGQLNVKIDRIPPGTNVSHVVVIQPTKSGYYNFSAAEVNYRLTEDANQ-VQVAVTSEPGEGVIIAYKDYDKKFSPHL 155
BLAST of EMLSAG00000000442 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold91_size383040-snap-gene-1.29 (protein:Tk03177 transcript:maker-scaffold91_size383040-snap-gene-1.29-mRNA-1 annotation:"translocon-associated protein subunit beta precursor") HSP 1 Score: 153.295 bits (386), Expect = 8.089e-48 Identity = 70/128 (54.69%), Postives = 96/128 (75.00%), Query Frame = 0 Query: 33 HLLLSKQVQNKYLVEGMDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRPKKFGYFXFXXAEVQXRVSDEADDIIQTGASSDPGHGVIISLKNYDKQFSAHI 160 LL+ KQ+QN++LVEG DIVVKY++YN+G+ A++V + E GF FD+V G S +LDR+ +N++H LVVRPK+FGYF F AEVQ R S+E + IQ G SSDPG +II+L++YDKQFS+H+ Sbjct: 40 RLLVGKQIQNRFLVEGKDIVVKYSLYNVGQSAALNVVLSEKGFSAQDFDLVGGQMSVRLDRLAAGANHSHALVVRPKRFGYFNFTAAEVQYRPSEEVEQ-IQIGHSSDPGQALIIALRDYDKQFSSHM 166 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000442 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 22
Pagesback to top
BLAST of EMLSAG00000000442 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 2
BLAST of EMLSAG00000000442 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 3
BLAST of EMLSAG00000000442 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 6
BLAST of EMLSAG00000000442 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 10
BLAST of EMLSAG00000000442 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
Pagesback to top
BLAST of EMLSAG00000000442 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1068:97826..99509+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000442-683208 ID=EMLSAG00000000442-683208|Name=EMLSAG00000000442|organism=Lepeophtheirus salmonis|type=gene|length=1684bp|location=Sequence derived from alignment at LSalAtl2s1068:97826..99509+ (Lepeophtheirus salmonis)back to top Add to Basket
|