EMLSAG00000000454, EMLSAG00000000454-683220 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000454 vs. C. finmarchicus
Match: gi|592921935|gb|GAXK01036454.1| (TSA: Calanus finmarchicus comp591907_c0_seq1 transcribed RNA sequence) HSP 1 Score: 32.3426 bits (72), Expect = 5.854e+0 Identity = 32/108 (29.63%), Postives = 48/108 (44.44%), Query Frame = 0 Query: 185 YDEDGCPLPASCSKFLAHCPD-SSFEPGTGCPVVPSKNCTTTNKQTCHNEPMHKSIIITEFRDEYGYSE---------YLTIFLNQTLTIDDPICDMGHFCVDRSDSD 282 Y + P P C F+A PD S P T C P ++CT + TC + H ++ E DE +E Y + + N+ LT+ + C + CV R+ SD Sbjct: 232 YGSNASPHPDYCEMFMA--PDHSQVVPCTHCSSGP-ESCTCSGSYTCKLDSEHLVELLFEVSDEINCAELCDQSSACQYYSWYSNEHLTLTN-TCALLRACVGRAGSD 543
BLAST of EMLSAG00000000454 vs. L. salmonis peptides
Match: EMLSAP00000000454 (pep:novel supercontig:LSalAtl2s:LSalAtl2s106:459063:461105:-1 gene:EMLSAG00000000454 transcript:EMLSAT00000000454 description:"maker-LSalAtl2s106-augustus-gene-4.14") HSP 1 Score: 1310.05 bits (3389), Expect = 0.000e+0 Identity = 658/658 (100.00%), Postives = 658/658 (100.00%), Query Frame = 0 Query: 1 MTLSSGFGTYITGSHPTFCPESPMASLCEQETQQECPKDRDITGCFHGYYCLPRWIYHNLMKCPLVCPPLCEEHEMFCPGSMVDECPTEDNCVAKIDENNKCPNYCPITCEKGQHICPGIRKDDGCRGPDTCVPIGTQCPSEIFDEFACPIIDSPSCVYPETHCHXTFCPATCIPGIETEXPETYDEDGCPLPASCSKFLAHCPDSSFEPGTGCPVVPSKNCTTTNKQTCHNEPMHKSIIITEFRDEYGYSEYLTIFLNQTLTIDDPICDMGHFCVDRSDSDEGCPIHCPVYCNNNTQKSCPGVLDDDGCLGQGMCVSIAESCPISQYDLDGCFVHGAINCDPEYEISCPGVRDQRGCIGRESCVPKHGDCSCPKEEFDHNGCLLEXSEPICNSTEIQCSRGKSAKGCDLGFDCSLSIIDGCPNHCSPHCDENKQACPIISPHTGAYANCSTTEGYECVDLYDSKGCTQFCSNHCTKIGLLTCPPIYNGEGCPTGPAVCTTDLDQCAPSTFNLKGCKKIKQLQNCSYYETGDYEGSYQLCSGGTDSHGXPRLNTCEPTLTPEGHPFHCPVVCQQNELSCSRGTFXSXSMGEFCXPADAHYNFMPNMSCATFCPAACDWSIQKACSGGYNKMTGCPHQDICIPKHKYCNTFPSGSPRSY 658 MTLSSGFGTYITGSHPTFCPESPMASLCEQETQQECPKDRDITGCFHGYYCLPRWIYHNLMKCPLVCPPLCEEHEMFCPGSMVDECPTEDNCVAKIDENNKCPNYCPITCEKGQHICPGIRKDDGCRGPDTCVPIGTQCPSEIFDEFACPIIDSPSCVYPETHCHXTFCPATCIPGIETEXPETYDEDGCPLPASCSKFLAHCPDSSFEPGTGCPVVPSKNCTTTNKQTCHNEPMHKSIIITEFRDEYGYSEYLTIFLNQTLTIDDPICDMGHFCVDRSDSDEGCPIHCPVYCNNNTQKSCPGVLDDDGCLGQGMCVSIAESCPISQYDLDGCFVHGAINCDPEYEISCPGVRDQRGCIGRESCVPKHGDCSCPKEEFDHNGCLLEXSEPICNSTEIQCSRGKSAKGCDLGFDCSLSIIDGCPNHCSPHCDENKQACPIISPHTGAYANCSTTEGYECVDLYDSKGCTQFCSNHCTKIGLLTCPPIYNGEGCPTGPAVCTTDLDQCAPSTFNLKGCKKIKQLQNCSYYETGDYEGSYQLCSGGTDSHGXPRLNTCEPTLTPEGHPFHCPVVCQQNELSCSRGTFXSXSMGEFCXPADAHYNFMPNMSCATFCPAACDWSIQKACSGGYNKMTGCPHQDICIPKHKYCNTFPSGSPRSY Sbjct: 1 MTLSSGFGTYITGSHPTFCPESPMASLCEQETQQECPKDRDITGCFHGYYCLPRWIYHNLMKCPLVCPPLCEEHEMFCPGSMVDECPTEDNCVAKIDENNKCPNYCPITCEKGQHICPGIRKDDGCRGPDTCVPIGTQCPSEIFDEFACPIIDSPSCVYPETHCHXTFCPATCIPGIETEXPETYDEDGCPLPASCSKFLAHCPDSSFEPGTGCPVVPSKNCTTTNKQTCHNEPMHKSIIITEFRDEYGYSEYLTIFLNQTLTIDDPICDMGHFCVDRSDSDEGCPIHCPVYCNNNTQKSCPGVLDDDGCLGQGMCVSIAESCPISQYDLDGCFVHGAINCDPEYEISCPGVRDQRGCIGRESCVPKHGDCSCPKEEFDHNGCLLEXSEPICNSTEIQCSRGKSAKGCDLGFDCSLSIIDGCPNHCSPHCDENKQACPIISPHTGAYANCSTTEGYECVDLYDSKGCTQFCSNHCTKIGLLTCPPIYNGEGCPTGPAVCTTDLDQCAPSTFNLKGCKKIKQLQNCSYYETGDYEGSYQLCSGGTDSHGXPRLNTCEPTLTPEGHPFHCPVVCQQNELSCSRGTFXSXSMGEFCXPADAHYNFMPNMSCATFCPAACDWSIQKACSGGYNKMTGCPHQDICIPKHKYCNTFPSGSPRSY 658
BLAST of EMLSAG00000000454 vs. L. salmonis peptides
Match: EMLSAP00000006847 (pep:novel supercontig:LSalAtl2s:LSalAtl2s387:354032:356686:-1 gene:EMLSAG00000006847 transcript:EMLSAT00000006847 description:"maker-LSalAtl2s387-snap-gene-3.20") HSP 1 Score: 103.219 bits (256), Expect = 3.160e-23 Identity = 122/461 (26.46%), Postives = 179/461 (38.83%), Query Frame = 0 Query: 30 QETQQECPKDRDITGCFHGYYCLPRWIYHNLMK-CPLVCPPLCEEHEMFCP-GSMVDECPTEDNCVAKI-------DENNKCPNYCPITCEKGQH-ICPGIRKDDGCRGPDTCVPIGTQCPSEIFDEFACPIIDSPSC-VYPETHCH----------------------XTFCPATCIPGIETEXPETYDEDGCPLPASCSKFLAHCPDSSFEPGTG-CPVV---PSKNCTTTNKQTCHNEPMH---KSIIITEF-RDEYGYSEYLTIFLNQTLTIDDPICD---------MGHFCV---DRSDSDEGCPIHCPVYCNNNTQKSCPGVLDDDGCLGQGMCVSIAESCPISQYDLDGCFVHGAIN-CDPEYEISCPGVRDQRGCIGRESCVPKHGDCSCPKEEFDHNGCLLEXSEPICNSTEIQCSRGKSAKGCDLGFDCSLSIIDGCPNHCSPHCDENKQA 436 +E + C K D C G+ C ++ +N + CP +C E+HE C G + CP D C+ KI C N+C +C+ H +CP + DGC GP+TC+P G CP+ +D C + + C E C CPA C G+ DE+GC LP SC F+ G CP + C T K H P K ++ EF D T F T ++ +C+ + CV +R CP HCP+ C ++ CPG + +D C CV+ + CP + D GC + I+ C+ CPGV D GC C+ K+ +CP+ +D NGC + S + C K C + +C C +C P C ++ Sbjct: 44 EENEVRCSKGFDKRNCLIGFTCQDKFSENNCINYCPTICD---EQHEKSCSQGIGFNGCPLPDICIPKIGTRYIYGQREINCTNHCRPSCDLTTHKLCPHVFDVDGCMGPETCIPRGNDCPTSEYDSNGCLVPKTKKCDEKTELFCLGGSDINGCKLQDTCMPRKVGNCLQTCPALCGQGM-ILCHSGVDENGCKLPDSCVPKQI----PGFDQCNGICPKICNGEQVKCVVTKKPKLHLGPFFIQTKHCVLNEFCMDIVDKKTNCTNFCPTTCEDNEKVCEGPLNEQGCKLPDVCVPEMNRGGRGNLCPEHCPIRCPEG-ERPCPGNIKEDSCREPPKCVAKDKKCPQGERDFFGCKIIEKISKCEDNNSRICPGVYDNVGCRTAPECMQKNE--TCPQSTYDRNGCRVLGPVACKWSHQKFCPMPLDEKNCPIQGECIEIKNGKCNQYCEPICSSSEHK 493 HSP 2 Score: 92.4337 bits (228), Expect = 7.687e-20 Identity = 131/530 (24.72%), Postives = 190/530 (35.85%), Query Frame = 0 Query: 182 PETYDEDGCPLPASCSKFLAH-CPDSSFEPGTGCPVVPSKNCTTTNKQTCHNEPMHKSIIITEFRDEYGYSEYL----TIFLNQ-----TLTIDDPICDMGHFCVDR-------SDSDEGCPIHCPVYCNNNTQKSCPGVLDDDGCLGQGMCVSIAESCPISQYDLDGCFVHGAINCDPEYEISCPGVRDQRGCIGRESCVPKH-GDC--SCPK----------EEFDHNGCLLEXS----------------EPICNSTEIQCSRGKS-----------AKGCDLGFDCSLSIID---GCPNHCSPHCDENKQACPIISPHTGAYANCSTTEGYECVDLYDSKGCTQFCSNHCTKI---GLLTCPPIYNGEGCPTGPAVCTTDLDQCAPSTFNLKGCKKIKQLQNCSYYETGDYEGSYQLCSGGTDSHGXPRLNTC-EPTLTPEGHPFHCPVVCQQNELSCSRGTFXSXSMGEFCXPADAHYNFMPNMSCATFCPAACDWSIQKACSGGYNKMTGCPHQDICIPKHKYC 647 P +DE+GCP C++ + + CP S ++ GC VV C + +I +D++ + + TI Q + I C + C+ + + C HC C+ T K CP V D DGC+G C+ CP S+YD +GC V CD + E+ C G D GC +++C+P+ G+C +CP D NGC L S ICN +++C K K C L C + I+D C N C C++N++ C G CV + G C HC G CP + C P C +C + GCK I+++ C + G Y T + TC + T G PV C+ S F + E P + N C +C C S K C GG + CP C K+K C Sbjct: 3 PGVFDENGCPGDVICAEEVDNKCPVSKYD-SRGCSVVKPIQCEENEVRCSKGFDKRNCLIGFTCQDKFSENNCINYCPTICDEQHEKSCSQGIGFNGCPLPDICIPKIGTRYIYGQREINCTNHCRPSCDLTTHKLCPHVFDVDGCMGPETCIPRGNDCPTSEYDSNGCLVPKTKKCDEKTELFCLGGSDINGCKLQDTCMPRKVGNCLQTCPALCGQGMILCHSGVDENGCKLPDSCVPKQIPGFDQCNGICPKICNGEQVKCVVTKKPKLHLGPFFIQTKHCVLNEFC-MDIVDKKTNCTNFCPTTCEDNEKVC------EGPLNEQGCKLPDVCVPEMNRGGRGNLCPEHCPIRCPEGERPCPGNIKEDSC-REPPKCVAKDKKCPQGERDFFGCKIIEKISKCEDNNSRICPGVYDNVGCRTAPECMQKNETCPQSTYDRNGCRVLGPVACKW-----SHQKFCPMPLDEKNCPIQGECIEIKNGKCNQYCEPICSSSEHKVCDGGRD-TNSCPFPKFCYNKNKAC 517 HSP 3 Score: 75.0998 bits (183), Expect = 2.101e-14 Identity = 97/368 (26.36%), Postives = 140/368 (38.04%), Query Frame = 0 Query: 301 CPGVLDDDGCLGQGMCV-SIAESCPISQYDLDGCFVHGAINCDPEYEISCPGVRDQRGCIGRESCVPKHGDCSCPKEEFDHNGCLLEXSEPICNSTEIQCSRGKSAKGCDLGFDCSLSI----IDG-----CPNHCSPHCDENKQACPIISPHTGAYANCSTTE-----GYEC-VDLYDSKGCTQFCSNHCTKIGLLTCPPIYNGEGCPTGPAVCTTDLDQCAPSTFNLKGCKKIKQLQNCSYYETGDYEGSYQLCSGGTDSHGXPRLNTCEPTLTPEGHPFH--CPVVCQQNELSCSRGTFXSXSMGEF------CXPADAHYNFM-PNMSCATFCPAACDWSIQKACSGGYNKMTGCPHQDICIPK 643 CPGV D++GC G +C + CP+S+YD GC V I C+ E E+ C D+R C+ +C +++F N C+ E CS+G GC L C I I G C NHC P CD + PH C E G +C YDS GC + C + L C + GC D C P +++ NC LC G D +G ++C P P + CP +C ++ C +G F C + + + +C FCP C+ + +K C G N+ GC D+C+P+ Sbjct: 2 CPGVFDENGCPGDVICAEEVDNKCPVSKYDSRGCSVVKPIQCE-ENEVRCSKGFDKRNCLIGFTC----------QDKFSENNCINYCPTICDEQHEKSCSQGIGFNGCPLPDICIPKIGTRYIYGQREINCTNHCRPSCDLTTHK---LCPHVFDVDGCMGPETCIPRGNDCPTSEYDSNGCLVPKTKKCDEKTELFCLGGSDINGCKL--------QDTCMP-----------RKVGNCLQTCPALCGQGMILCHSGVDENGCKLPDSCVPKQIPGFDQCNGICPKICNGEQVKCVVTKKPKLHLGPFFIQTKHCVLNEFCMDIVDKKTNCTNFCPTTCEDN-EKVCEGPLNEQ-GCKLPDVCVPE 334 HSP 4 Score: 71.2478 bits (173), Expect = 3.786e-13 Identity = 107/454 (23.57%), Postives = 167/454 (36.78%), Query Frame = 0 Query: 10 YITGSHPTFCPESPMASLCEQETQQECPKDRDITGCFHGYYCLPRW-----IYHNLMKCPLVCPPLCEEH-EMFC-PGSMVDECPTEDNCVAKIDENNKCPNYCPITCEKGQHICPGIRKDDGCRGPDTCVP------------------------IGTQCPSE------------IFDEFACPIIDSPSCVYPETHCHXTFCPATCIPGIETEXPETYDEDGCPLPASCSKFL----------AHCPDSSFEPGTGCPVVPSKNCTTTNKQTCHNEPMHKSIIITEFRDEYGYSEYLTIFLNQTLTIDDPICDMGHFCVDRSDSDEGCPIHCPVYCNNNTQKSCPGVLDDDGCLGQGMCVSIAESCPISQYDLDGCFVHGAINCDPEYEISCPGVRDQRGCIGRESCVP-KHGDCSCPKEEFDHNGCLLEXSEPICNSTEIQ-CSRGKSAKGC 408 YI G C S C+ T + CP D+ GC C+PR ++ C + C+E E+FC GS ++ C +D C+ + N C CP C +G +C ++GC+ PD+CVP + T+ P + +EF I+D +T+C FCP TC E +E GC LP C + HCP E CP + +C P + + + G ++ + + ++ C +N + CPGV D+ GC C+ E+CP S YD +GC V G + C ++ CP D++ C + C+ K+G C+ + EPIC+S+E + C G+ C Sbjct: 113 YIYGQREINCTNHCRPS-CDLTTHKLCPHVFDVDGCMGPETCIPRGNDCPTSEYDSNGCLVPKTKKCDEKTELFCLGGSDINGCKLQDTCMPRKVGN--CLQTCPALCGQGMILCHSGVDENGCKLPDSCVPKQIPGFDQCNGICPKICNGEQVKCVVTKKPKLHLGPFFIQTKHCVLNEFCMDIVDK------KTNC-TNFCPTTCEDN-EKVCEGPLNEQGCKLPDVCVPEMNRGGRGNLCPEHCPIRCPEGERPCP-------GNIKEDSCREPP---KCVAKDKKCPQGERDFFGCKIIEKIS----------------------------KCEDNNSRICPGVYDNVGCRTAPECMQKNETCPQSTYDRNGCRVLGPVACKWSHQKFCPMPLDEKNCPIQGECIEIKNGKCN-------------QYCEPICSSSEHKVCDGGRDTNSC 504 HSP 5 Score: 69.707 bits (169), Expect = 1.104e-12 Identity = 70/284 (24.65%), Postives = 110/284 (38.73%), Query Frame = 0 Query: 45 CFHGYYCLPRWIYHNLMKCPLVCPPLCEEHEMFCPGSMVDE-CPTEDNCVAKIDEN---NKCPNYCPITCEKGQHICPGIRKDDGCRGPDTCVPIGTQCPSEIFDEFACPIIDSPSCVYPETHCHXTFCPATCIPGIETEXPETYDEDGCPLPASCSKFLAHCPDSSFEPGTGCPVVPSKNCTTTNKQTCHNEPMHKSIIITEFRDEYGYSEYLTIFLNQTLTIDDPICDMGHFCVDRSDSDEGCPIHCPVYCNNNTQKSCPGVLDDDGCLGQGMCVSIAESCP 324 C +C+ I C CP CE++E C G + ++ C D CV +++ N CP +CPI C +G+ CPG K+D CR P CV +CP D F C II+ S C P YD GC C + CP S+++ GC V+ C ++++ C + +D+ C + C++ + C +C C+++ K C G D + C C + ++CP Sbjct: 285 CVLNEFCMD--IVDKKTNCTNFCPTTCEDNEKVCEGPLNEQGCKLPDVCVPEMNRGGRGNLCPEHCPIRCPEGERPCPGNIKEDSCREPPKCVAKDKKCPQGERDFFGCKIIEKIS---------------KCEDNNSRICPGVYDNVGCRTAPECMQKNETCPQSTYD-RNGCRVLGPVACKWSHQKFC------------------------------PMPLDEKNCPIQGECIEIKNGK--CNQYCEPICSSSEHKVCDGGRDTNSCPFPKFCYNKNKACP 518 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000454 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000000454 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 1
BLAST of EMLSAG00000000454 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 2
BLAST of EMLSAG00000000454 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000454 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000000454 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000000454 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s106:459063..461105- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000454-683220 ID=EMLSAG00000000454-683220|Name=EMLSAG00000000454|organism=Lepeophtheirus salmonis|type=gene|length=2043bp|location=Sequence derived from alignment at LSalAtl2s106:459063..461105- (Lepeophtheirus salmonis)back to top Add to Basket
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