EMLSAG00000000558, EMLSAG00000000558-683324 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000000558
Unique NameEMLSAG00000000558-683324
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000000558 vs. L. salmonis peptides
Match: EMLSAP00000000558 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1091:26405:29491:1 gene:EMLSAG00000000558 transcript:EMLSAT00000000558 description:"maker-LSalAtl2s1091-augustus-gene-0.9")

HSP 1 Score: 1352.81 bits (3500), Expect = 0.000e+0
Identity = 653/653 (100.00%), Postives = 653/653 (100.00%), Query Frame = 0 
Query:    1 MAQSDSDNAPLKQVLEKVMKSYVNGVYRWNAGNNERRDGLKNFLKIFIQNASRKDFRKLGHEALQKSWKEYEKSAYFSQTAPHFIYRIISKDRFPHIYRIDSRSTFYKFNHPLVPSPVPCGYKKCSMTPGEDSVQNVISVVCTNACHMFFHSSCFYEHIKTYGVLCTLTSECYALWTSCQVFGSTPEDFLKFCKVDAAIDKLECVEGPCLIQERFEDHEDPNKQTELRICKRLQEMWPSEEFEMEAENVRDIIATKVNNANFTEIMNSEICIRVQKSPRKVVQSPSPVKSQGSRKRPAMDSSVWTTSCVIEDPPFLTINLSNSSHIDKSDASTEPIVKNSDKGTDAMEIRKKTRXTTXTRKIKGIXSRYTQYNSQKTSDKSIGTNKPTSDRGTEATHVDKVDAQTETFIRSSIAVGVQTGRVEVREFLISNHQLFKMEQEFINYRYEEFNARCXLLKSAANTSLENGRIQVVRANALINAFRGMINEVRRKKLASQFVTESLRTYLRRIIMHKDDTERWIGEVEEHCCALQTNEDFXKPLLDYSLEFLLGLFPLPPPPEMNKLLSDCIFNELIVTGFHNFNDPNNLLLLDLVKEAVIEFPIAGKDAVIWSLFHIRRRVEFLDGIDLCKVLFRVLTQFTDNVIIESRKLVVYIA 653
            MAQSDSDNAPLKQVLEKVMKSYVNGVYRWNAGNNERRDGLKNFLKIFIQNASRKDFRKLGHEALQKSWKEYEKSAYFSQTAPHFIYRIISKDRFPHIYRIDSRSTFYKFNHPLVPSPVPCGYKKCSMTPGEDSVQNVISVVCTNACHMFFHSSCFYEHIKTYGVLCTLTSECYALWTSCQVFGSTPEDFLKFCKVDAAIDKLECVEGPCLIQERFEDHEDPNKQTELRICKRLQEMWPSEEFEMEAENVRDIIATKVNNANFTEIMNSEICIRVQKSPRKVVQSPSPVKSQGSRKRPAMDSSVWTTSCVIEDPPFLTINLSNSSHIDKSDASTEPIVKNSDKGTDAMEIRKKTRXTTXTRKIKGIXSRYTQYNSQKTSDKSIGTNKPTSDRGTEATHVDKVDAQTETFIRSSIAVGVQTGRVEVREFLISNHQLFKMEQEFINYRYEEFNARCXLLKSAANTSLENGRIQVVRANALINAFRGMINEVRRKKLASQFVTESLRTYLRRIIMHKDDTERWIGEVEEHCCALQTNEDFXKPLLDYSLEFLLGLFPLPPPPEMNKLLSDCIFNELIVTGFHNFNDPNNLLLLDLVKEAVIEFPIAGKDAVIWSLFHIRRRVEFLDGIDLCKVLFRVLTQFTDNVIIESRKLVVYIA
Sbjct:    1 MAQSDSDNAPLKQVLEKVMKSYVNGVYRWNAGNNERRDGLKNFLKIFIQNASRKDFRKLGHEALQKSWKEYEKSAYFSQTAPHFIYRIISKDRFPHIYRIDSRSTFYKFNHPLVPSPVPCGYKKCSMTPGEDSVQNVISVVCTNACHMFFHSSCFYEHIKTYGVLCTLTSECYALWTSCQVFGSTPEDFLKFCKVDAAIDKLECVEGPCLIQERFEDHEDPNKQTELRICKRLQEMWPSEEFEMEAENVRDIIATKVNNANFTEIMNSEICIRVQKSPRKVVQSPSPVKSQGSRKRPAMDSSVWTTSCVIEDPPFLTINLSNSSHIDKSDASTEPIVKNSDKGTDAMEIRKKTRXTTXTRKIKGIXSRYTQYNSQKTSDKSIGTNKPTSDRGTEATHVDKVDAQTETFIRSSIAVGVQTGRVEVREFLISNHQLFKMEQEFINYRYEEFNARCXLLKSAANTSLENGRIQVVRANALINAFRGMINEVRRKKLASQFVTESLRTYLRRIIMHKDDTERWIGEVEEHCCALQTNEDFXKPLLDYSLEFLLGLFPLPPPPEMNKLLSDCIFNELIVTGFHNFNDPNNLLLLDLVKEAVIEFPIAGKDAVIWSLFHIRRRVEFLDGIDLCKVLFRVLTQFTDNVIIESRKLVVYIA 653
The following BLAST results are available for this feature:
BLAST of EMLSAG00000000558 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of EMLSAG00000000558 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of EMLSAG00000000558 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000005580.000e+0100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1091:2640... [more]
back to top
BLAST of EMLSAG00000000558 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of EMLSAG00000000558 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of EMLSAG00000000558 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of EMLSAG00000000558 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1091supercontigLSalAtl2s1091:26405..29491 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s1091-augustus-gene-0.9
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000000558 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000000558EMLSAT00000000558-696405Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1091:26405..29491+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000000558-683324 ID=EMLSAG00000000558-683324|Name=EMLSAG00000000558|organism=Lepeophtheirus salmonis|type=gene|length=3087bp|location=Sequence derived from alignment at LSalAtl2s1091:26405..29491+ (Lepeophtheirus salmonis)
TAAAAATCTATGAAGAGTTGGGATCTTCATCTCATTGTGGACTCAGTCAG
CCAAGAGGGGTGATTAATTGTAATTTGGATCTGTGATATAATTATTTTTC
GTTATTAAATTTATAATCATCCGTCATCAACAATAATATGGCACAGAGTG
ATTCTGATAATGCTCCATTGAAACAAGTATTGGAAAAAGTAATGAAGAGT
TATGTGAATGGAGTTTATCGATGGAATGCAGGCAACAATGAGCGAAGAGA
TGGCTTGAAGAACTTTTTAAAAATCTTCATTCAAAATGCCTCTAGAAAGG
ACTTTCGAAAGCTTGGGCACGAGGCACTACAAAAGTCATGGGTAATATAC
AATTTTGAGTGGTTCTTCCTTCATTCCTAATGTTGTGTTCTCATAATTTA
TATTTATTTACAGAAAGAGTATGAAAAAAGTGCTTATTTTAGCCAAACAG
CCCCTCATTTCATATACCGCATCATTTCCAAGGACCGATTCCCGCACATA
TATCGCATTGATTCCAGATCCACTTTTTATAAATTTAATCACCCTCTAGT
CCCGTCTCCAGTGCCATGTGGTTATAAAAAATGTTCAATGACACCAGGGG
AAGACTCTGTTCAGAACGTGATATCCGTCGTCTGTACAAATGCATGCCAC
ATGTTCTTCCATTCCTCATGTTTTTATGAGCATATCAAGACTTATGGAGT
CCTTTGCACACTCACATCCGAATGCTATGCTCTATGGACTTCCTGTCAAG
TCTTTGGTTCAACTCCAGAGGATTTTCTTAAATTTTGTAAGGTTGATGCT
GCAATCGACAAATTAGAGTGTGTGGAGGGCCCTTGTCTTATTCAGGAGAG
ATTTGAGGATCATGAAGATCCCAATAAACAGACTGAACTTCGAATATGTA
AAAGGCTTCAGGAAATGTGGCCCTCTGAAGAATTTGAAATGGAAGCAGAA
AACGTGAGGGACATAATCGCCACCAAAGTCAATAATGCAAATTTCACGGA
AATTATGAACTCGGAAATTTGTATACGTGTACAAAAATCACCCCGGAAAG
TGGTCCAGAGCCCTTCACCAGTCAAATCTCAAGGATCGAGAAAAAGACCT
GCGATGGACTCGAGTGTTTGGTAATTAGAGCCTGTATTGATTTTTCTTAA
TTATAATTGTTTTTCCCAGGACTACTTCTTGTGTTATTGAGGATCCTCCG
TTTTTAACCATAAATCTGAGTAACTCCTCCCATATTGATAAATCAGATGC
TTCGACGGAGCCTATAGTCAAAAACTCTGATAAAGGCACTGATGCTATGG
AAATCAGGAAAAAAACAAGGAGWACAACTKCTACGCGAAAAATAAAAGGC
ATCTSGAGCCGCTACACTCAATACAATTCGCAGAAAACGAGCGATAAGTC
AATAGGAACAAATAAACCCACAAGTGACCGTGGAACCGAGGCAACCCATG
TGGATAAGGTTGACGCCCAAACTGAGACATTTATACGATCCTCAATTGCC
GTTGGTGTTCAAACTGGCCGTGGTATTGCGTTGAATTATATAGTTACTTA
TTTCTGATTAATATATTTATTTATTTTTTGAAAGTTGAAGTACGAGAATT
TCTCATCTCTAACCATCAGCTATTCAAAATGGAGCAGGAGTTTATTAATT
ATAGATACGAGGAGTTTAATGCCCGATGTAGKCTCTTGAAATCTGCTGCC
AATACGAGTCTTGAGAACGGACGAATCCAGGTCGTACGCGCTAATGCTCT
CATCAACGCATTTCGAGGGATGATTAATGAGGTTCGAAGAAAAAAACTCG
CATCTCAATTTGTCACCGAGTCTCTGCGAACCTATCTTCGACGTATCATC
ATGCATAAAGACGATACTGAGAGATGGATTGGAGAGGTAGAGGAGCATTG
CTGCGCGTTACAAACAAATGAGGATTTTATKAAGCCACTACTGGACTATT
CATTAGAGTTTCTACTGGGGCTTTTCCCTTTGCCTCCCCCTCCAGAAATG
AATAAATTATTATCTGACTGTATTTTTAACGAACTCATCGTGACAGGATT
CCATAATTTCAACGATCCCAACAATCTCCTCCTACTTGACCTCGTGAAAG
AGGCAGTTATAGAGTTTCCCATTGCGGGGAAGGATGCAGTCATTTGGAGC
TTGTTTCATATCCGAAGGAGGGTTGAGTTCTTGGACGGAATTGATTTGTG
CAAGGTTCTCTTTCGTGTTTTGACACAATTTACGGACAATGTTATCATCG
AGTCCAGAAAATTGGTCGTGTATATTGCATAAAAAATCTATTTTTCCTGT
ACATATATAACTATGTAGTTTTAATTATAAATATTATTTTTTAGATTAAT
GATTTTTCATAATATTTTATATGGAGATATAATTGTAATTTTTTATGAGG
AAATGTTCAGTTAAATATATATATATATATATATATTTATATCTAATTGC
AAGTGGTCTTATTTTGCTAATTAATGAACAATATACATACAGATGATAGA
AATAGGATGAAACAACCAGTTGCCTATTCGTTATTACATGTTTAGTGCGT
TTTCATGGTGCCAAGTAATTTTGCCTTGAAAGCATTTTGTCCCAAGGATA
TTTCGGCTTAATTTATATAAATAAATTAGGTTTAAACGTCGTTTTTCATT
ATTTTTACGAAAATAAAAACCTTTTTTTTCCCCGTTAATATTAAAGAAAA
TAGTCAAGTATTGGTTGTAAAATTGGACCAATAAATAAAAGGACCTTACT
ATCAAAAATATAACTAGTGCTTATTATATAGTCAAATCCAGATAAAGGAA
TCTACTATTTCTCTGATAAACCATCTGAGTTATGTAAAAAAGCACAATGT
TTGTATACTTATGTATGAGTAATTTTGAAATTCCTCATTCCGAGGCAACC
TTTTGTTTGATTAGATCCTGTTTGTGAGAGATCATCCAGGTTTTTTTAGC
TTGTCCCTCAGCAAAAGTGTATTATAGGGAGGTACTCGTGATTAGTGATC
TAGAAGTCATTATTTGTTTCCTTCGGACTATCAGTACTAGAACTGATTAA
AAAGTCGATAAAATAATGGAAATCGTCTAGTTGGACC
back to top
Add to Basket