EMLSAG00000000697, EMLSAG00000000697-683463 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000697 vs. C. finmarchicus
Match: gi|592823506|gb|GAXK01131062.1| (TSA: Calanus finmarchicus comp3506014_c0_seq1 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 1.223e+0 Identity = 20/57 (35.09%), Postives = 33/57 (57.89%), Query Frame = 0 Query: 49 DLLIPSQSNKKNPDIKPFILKLVKMIKAVNECIPCLCK-------AVNRKRGISFEG 98 LL+ SQS++K PDI PF+L + ++K + +PC+ K AV R + ++F Sbjct: 175 SLLVNSQSSQK-PDI-PFVLSVFVVMKRLLVMLPCVVKKLLKFLNAVLRLKSMNFNA 339
BLAST of EMLSAG00000000697 vs. C. finmarchicus
Match: gi|592838652|gb|GAXK01118892.1| (TSA: Calanus finmarchicus comp192084_c0_seq2 transcribed RNA sequence) HSP 1 Score: 28.1054 bits (61), Expect = 6.214e+0 Identity = 21/61 (34.43%), Postives = 32/61 (52.46%), Query Frame = 0 Query: 20 CIDTEVKKQFDSESEYWAESCGDCQKKVTDLLIPSQSNKKNPDIKPFILKLVKMIKAVNEC 80 CI K +FD E +SC +C + V D +IPS++ +NP K ++ KM A +C Sbjct: 578 CISKWRKAKFD---EDIRKSCPEC-RVVQDFVIPSKNWVENPTSKAEFVERFKMNAAKKDC 748
BLAST of EMLSAG00000000697 vs. C. finmarchicus
Match: gi|592838653|gb|GAXK01118891.1| (TSA: Calanus finmarchicus comp192084_c0_seq1 transcribed RNA sequence) HSP 1 Score: 27.335 bits (59), Expect = 9.699e+0 Identity = 21/61 (34.43%), Postives = 32/61 (52.46%), Query Frame = 0 Query: 20 CIDTEVKKQFDSESEYWAESCGDCQKKVTDLLIPSQSNKKNPDIKPFILKLVKMIKAVNEC 80 CI K +FD E +SC +C + V D +IPS++ +NP K ++ KM A +C Sbjct: 578 CISKWRKAKFD---EDIRKSCPEC-RVVQDFVIPSKNWVENPTSKAEFVERFKMNAAKKDC 748
BLAST of EMLSAG00000000697 vs. L. salmonis peptides
Match: EMLSAP00000000697 (pep:novel supercontig:LSalAtl2s:LSalAtl2s110:443333:446119:1 gene:EMLSAG00000000697 transcript:EMLSAT00000000697 description:"maker-LSalAtl2s110-snap-gene-4.25") HSP 1 Score: 216.083 bits (549), Expect = 1.355e-73 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0 Query: 1 MKSHQKAMLAYVTRSADAGCIDTEVKKQFDSESEYWAESCGDCQKKVTDLLIPSQSNKKNPDIKPFILKLVKMIKAVNECIPCLCKAVNRKRGISFEGCESFGF 104 MKSHQKAMLAYVTRSADAGCIDTEVKKQFDSESEYWAESCGDCQKKVTDLLIPSQSNKKNPDIKPFILKLVKMIKAVNECIPCLCKAVNRKRGISFEGCESFGF Sbjct: 1 MKSHQKAMLAYVTRSADAGCIDTEVKKQFDSESEYWAESCGDCQKKVTDLLIPSQSNKKNPDIKPFILKLVKMIKAVNECIPCLCKAVNRKRGISFEGCESFGF 104
BLAST of EMLSAG00000000697 vs. L. salmonis peptides
Match: EMLSAP00000001716 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1297:29284:29876:-1 gene:EMLSAG00000001716 transcript:EMLSAT00000001716 description:"snap_masked-LSalAtl2s1297-processed-gene-0.3") HSP 1 Score: 70.4774 bits (171), Expect = 1.168e-16 Identity = 32/37 (86.49%), Postives = 35/37 (94.59%), Query Frame = 0 Query: 2 KSHQKAMLAYVTRSADAGCIDTEVKKQFDSESEYWAE 38 KSH+KAM+AYVTR ADAGCIDTEVKKQFDSE EYW+E Sbjct: 63 KSHKKAMVAYVTRCADAGCIDTEVKKQFDSECEYWSE 99 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000697 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000000697 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 3
BLAST of EMLSAG00000000697 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 2
BLAST of EMLSAG00000000697 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000697 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000000697 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000000697 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s110:443333..446119+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000697-683463 ID=EMLSAG00000000697-683463|Name=EMLSAG00000000697|organism=Lepeophtheirus salmonis|type=gene|length=2787bp|location=Sequence derived from alignment at LSalAtl2s110:443333..446119+ (Lepeophtheirus salmonis)back to top Add to Basket
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