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Associated RNAi Experiments
Homology
BLAST of EMLSAG00000000713 vs. L. salmonis peptides
Match: EMLSAP00000000713 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1110:46956:52499:-1 gene:EMLSAG00000000713 transcript:EMLSAT00000000713 description:"maker-LSalAtl2s1110-augustus-gene-0.29") HSP 1 Score: 904.82 bits (2337), Expect = 0.000e+0 Identity = 442/442 (100.00%), Postives = 442/442 (100.00%), Query Frame = 0
Query: 1 MQSIEVRDSRKEDMEEDAVGQKFTAMMMKIHILLSLFLFLQSPYLSSSTGTPTHSFYTPVNTGTNHQAGNQVIWSPIEPKKEDGLSIIQHNPHHQSLIQPFSGNAPTSTADNSYVLSEPKSQSNLYVTSGSGRAGGGDNIFKSYSGPSGGGDHVETEALVQFYQRPIGYEITSEKGVPQYGGDQRGGIDPSFTGGETFPPSSHGDLRAKPVNEDNSFHDGYSHFQAQKQNQEASSNDPNKNFEDFEGFGIDEDDGDFRQDFSEDYNDGSKDYNHNHHHQTREHENNLHANPEHNTNNNQRNHGTHSEHHENEYTEPSNSFYDYASQDYREEVSENSGPSAKSPVKFNPYGGFQVYGSPSDSSFEHEDYNKSPSSRENYNDHPNQHDFYNGPEGTPSNGQTRDVIPTLSERMYDDNPSGMKYKHISTRDASNPLRAYNSFINP 442
MQSIEVRDSRKEDMEEDAVGQKFTAMMMKIHILLSLFLFLQSPYLSSSTGTPTHSFYTPVNTGTNHQAGNQVIWSPIEPKKEDGLSIIQHNPHHQSLIQPFSGNAPTSTADNSYVLSEPKSQSNLYVTSGSGRAGGGDNIFKSYSGPSGGGDHVETEALVQFYQRPIGYEITSEKGVPQYGGDQRGGIDPSFTGGETFPPSSHGDLRAKPVNEDNSFHDGYSHFQAQKQNQEASSNDPNKNFEDFEGFGIDEDDGDFRQDFSEDYNDGSKDYNHNHHHQTREHENNLHANPEHNTNNNQRNHGTHSEHHENEYTEPSNSFYDYASQDYREEVSENSGPSAKSPVKFNPYGGFQVYGSPSDSSFEHEDYNKSPSSRENYNDHPNQHDFYNGPEGTPSNGQTRDVIPTLSERMYDDNPSGMKYKHISTRDASNPLRAYNSFINP
Sbjct: 1 MQSIEVRDSRKEDMEEDAVGQKFTAMMMKIHILLSLFLFLQSPYLSSSTGTPTHSFYTPVNTGTNHQAGNQVIWSPIEPKKEDGLSIIQHNPHHQSLIQPFSGNAPTSTADNSYVLSEPKSQSNLYVTSGSGRAGGGDNIFKSYSGPSGGGDHVETEALVQFYQRPIGYEITSEKGVPQYGGDQRGGIDPSFTGGETFPPSSHGDLRAKPVNEDNSFHDGYSHFQAQKQNQEASSNDPNKNFEDFEGFGIDEDDGDFRQDFSEDYNDGSKDYNHNHHHQTREHENNLHANPEHNTNNNQRNHGTHSEHHENEYTEPSNSFYDYASQDYREEVSENSGPSAKSPVKFNPYGGFQVYGSPSDSSFEHEDYNKSPSSRENYNDHPNQHDFYNGPEGTPSNGQTRDVIPTLSERMYDDNPSGMKYKHISTRDASNPLRAYNSFINP 442
The following BLAST results are available for this feature:
BLAST of EMLSAG00000000713 vs. GO
Analysis Date: 2014-04-02 ( Blast vs. GO)
Total hits: 0
Match Name | E-value | Identity | Description | |
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BLAST of EMLSAG00000000713 vs. L. salmonis peptides
Analysis Date: 2014-05-10 ( Blastp vs. self)
Total hits: 1
Match Name | E-value | Identity | Description | |
EMLSAP00000000713 | 0.000e+0 | 100.00 | pep:novel supercontig:LSalAtl2s:LSalAtl2s1110:4695... | [more] |
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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
LSalAtl2s1110 | supercontig | LSalAtl2s1110:46956..52499 - |
Analyses
This gene is derived from or has results from the following analyses
Properties
Property Name | Value |
Logic name | ensemblgenomes |
Description | maker-LSalAtl2s1110-augustus-gene-0.29 |
Biotype | protein_coding |
Evidence | IEA |
Note | Hypothetical protein |
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1110:46956..52499- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAG00000000713-683479 ID=EMLSAG00000000713-683479|Name=EMLSAG00000000713|organism=Lepeophtheirus salmonis|type=gene|length=5544bp|location=Sequence derived from alignment at LSalAtl2s1110:46956..52499- (Lepeophtheirus salmonis) ATGCAATCGATTGAGGTTCGTGATTCAAGGAAAGAGGATATGGAAGAGGA
TGCGGTTGGTCAAAAATTTACTGGTGAGACACAGACACGTAACGACATTA
ATTATGTCTCATCCAGTCTCTTCCTTTCCATTAAGACACTAACCAATGAT
TCAGATGTTTTTTGAATCTCACCGTTTGCATTAATGACTAATTTTATGTA
ATATTTATTGCTTTCTTCATCTCAACTGTCACGATCCCTGTTAAGAAGAT
CGTAGAGTTGAATGGGGTTAAGGTCTTTTGAAGCTTAAGGCTTCAATTGT
TCTTCCATTTTTCCTTCTTTGACCTTTTTCAAGAGATCGTTTTTCAGTAT
GGGAATTTGTATCATGAGCTTTCCCTAAAGAGGACATATTGCTCAATTTG
GCCTTTGTAAATTATTAGAAATTCACTAACAGTCATGAATATACTAAAAA
TAGGCATGGATCCACAGCAGGCACTGGAGAACAAACTGAAATTACAGTTT
CTATAGAAAGATTCCATTAAATTTACAAGCTCATGTTTTCGGCCTGAAGT
ACGAGCACTTCGACTCTTTAATTCAGAGCGCTGGTCCTTAAGTGTCCAGT
TATTGTAGTCTTCCAATGTTTTTCTTTGGTTTATAAGGAAAAATTAGTAG
AAACAAGGTCAATACGACTGTCAAACCAGAGTAAAGATTCACAAGTTGGA
AATTTATTAAGTGGAATATATGTTTTAATATTTTTGTTTACCTCTAACCA
TAACATCTGGTCGGGAAATCTTGCAACTTGGTTAACATCCTCATTGTAGG
AGACGGTCTTAGTGTTTTTCCTCCCCTCCCCCCAAATCATTTTANNNNNN
NTCTGGGCAAGTACTCCCATCCTTTTATCCCCTAGAGTTTTACTCCCCGA
ACCATCTATCCCCCAGTATTTTACCACCAATTCAATAAGTAGCAACTAAA
CATTCAATCTTTTCCCAACCATAGAACGTACTTGTTAATATAACTTAATG
ATGTAGGTAGTAGTGATGTATCGGACTTCTTTTGACTTAATCTTTCCTAT
TTACCAATCAATAGAAAGGATGTTTTATATCGAAAGGGTATTGAAACTAT
GCTTTTCTTCCATTCGTTAGGATCCAAAATCCTAATGAGTAGAAGATAGT
TAATTGTCACGTAGAATCCCAAAATATGCATAGGATATAAACACATAGAA
CTACGATATATATATTACTCCCGAGGCACTAGGAGGGAAGCACAAGTAAA
GGATGGATGCGAGCACAGCAAAATTTATGATTATGATAACTGATAAGTTT
ATGAAGTACATATGTTGATACATAATACAAATTTATCATATTCATGTAGA
CTGACATGGACCCCATCTTGATCTATAACTCTAGTACAATCGTTGATGGA
GTTAGAGATTTCAACATTTCTTTATGACATTTTGATGAAAAAATGGATGG
ATATGCTAATGGTTCTTTGCAACGGAACGTAGCTGTAGCTTTCCGTGATT
CCCTCCCAATGCTTTGAAATCTACGTATTATATATAATTAATGTTTGAAG
AATTGTAATTGTCTACCTTGTTTACATTTTTGTTTCTAATATCTCAAAGC
TGGAGTATAGCGGTAAAAATTCAAAACAAATATATAACTAAGAAGAATTA
GTATTCCTTCTCTTATTATCCAAGGCAAAACAGTACAAGAGGAAAACACT
TCAAGGCGAAAGTGGTACAAGGCGAATACGTTACAATGCAAAAACGTAGA
AGGCAAAAATGTTCCAGATGAGCCCTCCTAGAACCGTACAGATTGCCTTA
TCAGTCTTTTTTTCCTCACCCCTTCAGCCTTTAGGACTGATGCATCGATC
TTTCAGACCGACGGTCCTATCTATATTTTTTTTTCTTCACTCATAGCTAG
GATTGAAGAATGTAAGAACTAAAAAGATAATGAATGATATAAAGAAGGTA
TAATAATATCTACTATCATATGTAAATCCTGTAAATTTCTTTGCTGGCCC
GTTTTTTGGAATTGGTAATTTGAAGAATGAACTTTAATTCCCTTAGTTGT
AATTATTATTTAATTCCTGAGTAGGGAACATCCTTTCCTAAATAGATGGG
ATTATATCCCAAACCTTATTGAAAATTCGTTTGTACTCATAAAGAGCCTG
ATAATTTGTTGGAGAGTTGTAATAGCCTTGTTGGACTCAGAGTAGAATTG
GGGATCGACATCGAAGTAATTCTAGCAAATTCCCTTGTGTTATCTATTGA
TACGTCATTACAACATTTTTTGTTGTTTTCTGTCCATTTGATGTAAATAT
ACTCAAACTTGGACCCCCTTTTGAAACATATGATTTACCATGTGAAAATA
CTGATTTCGGAAAATATACAGTATTTTTTTCAAATTTTTAACATTGTGAT
TTAATTATTGATATTGTCATTGCAAACTTAATTGGGAACTGTTTTCTTAT
AATTGAAAATTGAATCGTACTTGTGATTTTTCTAATAAATACAATTATTA
CATTAGATGTCAGGAATCTCGTCTGATCAGTATGAAACATAGTCTGAAGT
ACATAACTCTGAATTCTGAACAACTTTTACTATTTCATAACTAAAGTATG
TATTTGTCTCTCTTTTTGAAATAATTTAATAATTATCATTGTTTTTTTTA
AGCAGGGCGTACATTAAACACATACATAAATTATTTTAATACTATGAAGG
TACTGTATATGTATATGTATGTTTCATAATATTCAAATTATGCTAATAAA
GTATTTTTCGCAGGCCATATGAAATTCATTCACATTTGTTCCACAGGCCT
CTTATTGAGAATTCCTGGCCTATGTATTCAAAAAACCAAAGAGTATTCGT
AACTGTTTTTTCTATAAGAAGCTGAATTTCTTTAAAGGACTGAATTAGTT
TGTTAAAGCCGTAAGGATCTCAGATCGGTCTAGAATTTTCAGACCAAACT
GCAACACTAGTGTCTGATCTCTCCTACAATTTGCGCTTAATCCTTATATA
TAAATTAAAATATTTCACGTTAAGATTTTAATATTAATTACCCTATAAAC
GTATTTTCAGCTTCATCATTGTATGACCCTTGAGAACGTCTTATGATATT
ACATTTACGTATAAATATTTTATGATAATGTCAATATTTAGACATATGTA
CTTTGTGATGGGATTAGAAGTATGATTATTTATTCCATTCTTTGGGAAGA
AAATGTACGTTCCGAACTTTGAACAAGAACATTTAATATTTGATTTTTTT
TAAATAATATATTGATTTTTTTTTTAAATTAAATATTTGATTTTTTTTCC
AACGACTTTATACTCGAAATTTTTAACAAAAAATTTCATTTCTTTCTAAC
CAGCTCTAGATTTTTGATTTTTAAAGTTTATTTTTGGAGTAGGTATTTTA
TATTTGATATTTAATTCAAGAATTATTTTTCCAAAAAATTCAGTTTTTTC
TGAACACCACTGGATTTTTTGAGAATAGCTTTGGATTTTTAAAATTTTTC
GCTGCAATATTTAATATGTGATTTTCCTTACATAAAAATTATATTTGAAA
TTTGATTTTAGAAATTTTTTTCCGTAAAATTTCTTATTTTGTAAAAAACT
CTGGATTTTTGAAATCCATCTCCAAAAATTGTAATATTTAAATTCTTTTT
TTGAAAGATTTTATATTTTAGAATTTCTTTTAGAAATTTTTTTCCAAAAA
ATTTATGTTTTATCTCAAACACGTCTGAATTTTTGAATTTTTTTTCAAAC
AATTCCTTTTATTCTAATAATTATGGATTTTTAAATCTTTTATACAGAAC
ATTTAACATTTGGGATTTTTTTTTTCTAAATTTTATATTTGAAATTTAAT
TTTAGAAATTTTTTCATCAAATTTGATTTTCAGATTATTATTTTTCCATT
TTTTTGTTTTTTTTTCAAAAAAATCCAAAATCCCCCCCCTCCCCCCAAAA
AAATATATATATAATTTTACGGACGCCCCTGAACTTGATTACTACTTTGT
TCATCAAGTATATATGCATGTTTTTTTTTCAGCGATAATTTCTATTCCTC
CGTTTTACATCCAGTTTTTGAAGGATTTTTGTTATTTTTATTCTCTGTGA
TTCTTCTACTGGAGAATGACTTTCCAAAGGAGAAAATGTTATTTCAACAT
TTCTATAAAAGATCCACTTCCTGAGCGTCAAGGCATCAGTATTGATATTC
ATGATTACAGGAACAGATCTGAGAATTAGGTAAGTCTTTCACCTTTGTTA
TTCCTTCATTACATAACTCAGTATCTCACTATTATTAGCTATGATGATGA
AGATCCATATCCTCCTATCTCTTTTTCTATTTCTTCAAAGTCCTTATCTT
TCAAGCTCCACAGGGACTCCAACCCATAGCTTTTATACACCAGTAAATAC
AGGAACGAATCATCAGGCCGGGAATCAAGTGATATGGAGTCCAATCGAAC
CTAAAAAAGAAGATGGCCTAAGTATTATACAACACAATCCTCATCATCAA
TCCCTGATTCAGCCTTTCAGTGGAAATGCACCCACATCCACAGCAGATAA
CTCCTATGTCCTATCCGAACCCAAATCTCAGTCCAATTTATACGTAACTA
GCGGAAGTGGAAGAGCAGGTGGTGGAGATAACATATTTAAAAGTTATTCC
GGTCCTTCTGGAGGGGGAGATCATGTAGAGACTGAGGCTCTCGTTCAATT
TTATCAACGGCCTATAGGATATGAAATAACGAGTGAAAAAGGAGTTCCAC
AGTATGGAGGGGATCAGAGAGGAGGGATTGATCCTTCATTCACTGGAGGT
GAGACCTTTCCACCTTCAAGTCATGGAGATTTGAGAGCAAAGCCCGTTAA
CGAAGACAATAGCTTCCACGATGGATATTCACATTTTCAAGCACAGAAAC
AAAACCAAGAAGCGAGTAGCAACGATCCGAACAAGAATTTTGAGGATTTT
GAAGGATTTGGAATTGACGAGGATGATGGGGATTTCCGTCAGGATTTTTC
GGAAGATTATAACGATGGATCCAAGGATTACAATCACAATCATCATCATC
AAACACGTGAGCATGAGAATAACTTGCACGCCAATCCTGAACACAACACT
AACAACAATCAGCGCAATCATGGAACCCATAGTGAACATCACGAAAATGA
ATACACAGAGCCCTCCAATTCTTTTTACGACTATGCTTCTCAGGATTATA
GAGAAGAAGTAAGTGAAAATTCGGGTCCTTCGGCTAAATCGCCAGTTAAA
TTTAACCCCTATGGAGGCTTTCAAGTATATGGTAGTCCTTCAGACTCTTC
ATTTGAGCATGAAGATTACAATAAGTCTCCTTCTAGCCGAGAGAACTATA
ATGATCATCCCAATCAACATGATTTCTATAATGGACCTGAAGGAACTCCA
AGTAATGGACAAACAAGGGATGTGATTCCAACGCTCTCTGAGAGGATGTA
TGATGATAATCCTTCAGGCATGAAATATAAGCATATTTCTACAAGAGATG
CATCAAATCCTCTGAGAGCTTATAATTCATTCATCAATCCTTAA back to top
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