EMLSAG00000000754, EMLSAG00000000754-683520 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000754 vs. L. salmonis peptides
Match: EMLSAP00000000754 (pep:novel supercontig:LSalAtl2s:LSalAtl2s111:578963:580540:1 gene:EMLSAG00000000754 transcript:EMLSAT00000000754 description:"maker-LSalAtl2s111-snap-gene-5.20") HSP 1 Score: 790.415 bits (2040), Expect = 0.000e+0 Identity = 388/388 (100.00%), Postives = 388/388 (100.00%), Query Frame = 0 Query: 1 MNTTLFFLALSIMLFLNEGVEMMKDKGGCRTTNGVPCLHKTDPKVYQYFQYHKWNSTCFKYNGRKQRCMVSPGVLRPCKCSKQCGGCGNKRIPTDQRKSTSFKSLNSHKFKVSQRNGEFSAINKVPINMFKDSSNFDKEEKDPNHNCNVGSMDKDIIRKFNEIQRIVEGSNGEDEDQPMYKKGLNIADGRNEDLENKGSSGNNSELSSEKLNYTQSKDSKSESKEEDEEESSSEMDEALESKSKLEDGPDYDDMESKAEKEEGPGDDTNESRTEMKQGSGDDGMNSKSEKEEVSGKKGIHFNMSSKKGEDDIARGKKDLEKDNGDKDERFVLMEFLEKMLSNLQKGNNSSKQEGNQTENAMDSVLLKKAKRKLYGAANFEILDDGERL 388 MNTTLFFLALSIMLFLNEGVEMMKDKGGCRTTNGVPCLHKTDPKVYQYFQYHKWNSTCFKYNGRKQRCMVSPGVLRPCKCSKQCGGCGNKRIPTDQRKSTSFKSLNSHKFKVSQRNGEFSAINKVPINMFKDSSNFDKEEKDPNHNCNVGSMDKDIIRKFNEIQRIVEGSNGEDEDQPMYKKGLNIADGRNEDLENKGSSGNNSELSSEKLNYTQSKDSKSESKEEDEEESSSEMDEALESKSKLEDGPDYDDMESKAEKEEGPGDDTNESRTEMKQGSGDDGMNSKSEKEEVSGKKGIHFNMSSKKGEDDIARGKKDLEKDNGDKDERFVLMEFLEKMLSNLQKGNNSSKQEGNQTENAMDSVLLKKAKRKLYGAANFEILDDGERL Sbjct: 1 MNTTLFFLALSIMLFLNEGVEMMKDKGGCRTTNGVPCLHKTDPKVYQYFQYHKWNSTCFKYNGRKQRCMVSPGVLRPCKCSKQCGGCGNKRIPTDQRKSTSFKSLNSHKFKVSQRNGEFSAINKVPINMFKDSSNFDKEEKDPNHNCNVGSMDKDIIRKFNEIQRIVEGSNGEDEDQPMYKKGLNIADGRNEDLENKGSSGNNSELSSEKLNYTQSKDSKSESKEEDEEESSSEMDEALESKSKLEDGPDYDDMESKAEKEEGPGDDTNESRTEMKQGSGDDGMNSKSEKEEVSGKKGIHFNMSSKKGEDDIARGKKDLEKDNGDKDERFVLMEFLEKMLSNLQKGNNSSKQEGNQTENAMDSVLLKKAKRKLYGAANFEILDDGERL 388
BLAST of EMLSAG00000000754 vs. L. salmonis peptides
Match: EMLSAP00000000755 (pep:novel supercontig:LSalAtl2s:LSalAtl2s111:652866:654437:-1 gene:EMLSAG00000000755 transcript:EMLSAT00000000755 description:"snap_masked-LSalAtl2s111-processed-gene-5.5") HSP 1 Score: 83.1889 bits (204), Expect = 3.191e-18 Identity = 48/122 (39.34%), Postives = 65/122 (53.28%), Query Frame = 0 Query: 6 FFLALSIMLFLNEGVEMMKDKGGCRTTNGVPCLHKTDPKVYQYFQYHKWNSTCFKYNGRKQRCMVSPGVLRPCKCSKQCGGCGNKRIPTDQRKSTSF-KSLNSHKFKVSQRNGEFSAINKVP 126 LA ++ G++ + C +G PCL T+ +V +YFQY+ WNSTCFKY G K+RCM+ G LR C CSK+C CG I D K + F K N K+ +R S +VP Sbjct: 10 MLLAFLFQVWAQSGLK----QDECHALDGTPCLQPTESEVLKYFQYYGWNSTCFKYKG-KRRCMIQTGRLRLCSCSKEC-DCGG--IENDLTKKSVFRKPFNMKKYGRKRRINLKSRSAQVP 123
BLAST of EMLSAG00000000754 vs. L. salmonis peptides
Match: EMLSAP00000011068 (pep:novel supercontig:LSalAtl2s:LSalAtl2s747:71658:81234:-1 gene:EMLSAG00000011068 transcript:EMLSAT00000011068 description:"maker-LSalAtl2s747-augustus-gene-0.5") HSP 1 Score: 63.1586 bits (152), Expect = 5.795e-11 Identity = 32/78 (41.03%), Postives = 47/78 (60.26%), Query Frame = 0 Query: 8 LALSIMLFLNEGVEMMKDKGG-CRTTNGVPCLHKTDPKVYQYFQYHKWNSTCFKYNGRKQRCMVSPGVLRPCKCSKQC 84 L + + LF+ GV ++K G C++ NG C+ K + YF + KW STCFKY+ ++ CM+S G LRPC C +C Sbjct: 3 LKVCLTLFI-LGVCVVKQTNGVCKSVNGEICMTKNNQGAAIYFNWFKWESTCFKYS-EQRWCMISLGQLRPCTCENKC 78 HSP 2 Score: 57.7658 bits (138), Expect = 2.725e-9 Identity = 26/59 (44.07%), Postives = 33/59 (55.93%), Query Frame = 0 Query: 27 GGCRTTNGVPCLHKTDPKVYQYFQYHKWNSTCFKYNGRKQRCMVSPGVLRPCKCSKQCG 85 G C++ G C+ DP YF Y WNSTCF Y CM++ G L+PC CS+ CG Sbjct: 425 GICKSRFGTNCMTIDDPGARVYFAYFNWNSTCFAYQ-DGHYCMINLGYLQPCDCSQDCG 482
BLAST of EMLSAG00000000754 vs. L. salmonis peptides
Match: EMLSAP00000000866 (pep:novel supercontig:LSalAtl2s:LSalAtl2s114:123519:124869:1 gene:EMLSAG00000000866 transcript:EMLSAT00000000866 description:"maker-LSalAtl2s114-augustus-gene-1.6") HSP 1 Score: 53.9138 bits (128), Expect = 2.811e-8 Identity = 25/56 (44.64%), Postives = 38/56 (67.86%), Query Frame = 0 Query: 29 CRTTNGVPCLHKTDPKVYQYFQYHKWNSTCFKYNGRKQRCMVSPGVLRPCKCSKQC 84 C TT+G+ C+ K + YF++ K+ STCFKYN ++ CM++PG LR C+C+ C Sbjct: 24 CLTTSGLRCMTKDEDGADLYFKHFKFKSTCFKYN-EQRLCMITPGNLRQCECTNNC 78 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000754 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000000754 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 0
BLAST of EMLSAG00000000754 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 4
BLAST of EMLSAG00000000754 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000754 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000000754 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000000754 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s111:578963..580540+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000754-683520 ID=EMLSAG00000000754-683520|Name=EMLSAG00000000754|organism=Lepeophtheirus salmonis|type=gene|length=1578bp|location=Sequence derived from alignment at LSalAtl2s111:578963..580540+ (Lepeophtheirus salmonis)back to top Add to Basket
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