EMLSAG00000000957, EMLSAG00000000957-683723 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000957 vs. C. finmarchicus
Match: gi|592868745|gb|GAXK01088817.1| (TSA: Calanus finmarchicus comp2357922_c0_seq2 transcribed RNA sequence) HSP 1 Score: 30.4166 bits (67), Expect = 6.137e+0 Identity = 23/66 (34.85%), Postives = 28/66 (42.42%), Query Frame = 0 Query: 408 KATVSKYKISMEVKVXXXXKSKDNNIPLSSVFEKMDTDL----------RKESFDDGGXTNEEEQE 463 K V KY+ +M DNN SV +++ DL RKES DD G NEE E Sbjct: 130 KGQVPKYRTAM----------SDNNESKKSVLDRLSGDLLEENCSESEDRKESIDDAGVENEERGE 297
BLAST of EMLSAG00000000957 vs. C. finmarchicus
Match: gi|592927877|gb|GAXK01030607.1| (TSA: Calanus finmarchicus comp117507_c1_seq1 transcribed RNA sequence) HSP 1 Score: 31.5722 bits (70), Expect = 8.981e+0 Identity = 20/61 (32.79%), Postives = 30/61 (49.18%), Query Frame = 0 Query: 355 FISGSFVSKEIPRVEQRQWYKKIENFMIEKETIFPEVLKARQKEGFVPSKQVIKATVSKYK 415 F S S SKE+P+ E + ++ K I E + + F+PSKQV A + +YK Sbjct: 2180 FRSKSRSSKEVPKQESNDPFGHLKCSPAMKSFIVTEFEREKVSCNFLPSKQVALAVIHRYK 2362
BLAST of EMLSAG00000000957 vs. C. finmarchicus
Match: gi|592782441|gb|GAXK01172127.1| (TSA: Calanus finmarchicus comp62177_c11_seq9 transcribed RNA sequence) HSP 1 Score: 31.5722 bits (70), Expect = 9.365e+0 Identity = 25/90 (27.78%), Postives = 44/90 (48.89%), Query Frame = 0 Query: 282 SLDSEYHYKEFPKDANKKIK-GRYSVTFCYNPRFYQTKYETRSDILQDEEEQSRFEH--ILESLFKKKEEEMNNSKFISGSFVSKEIPRV 368 +L S YH PKD +K+IK G+ +N R + E S + + + + E +E +FKK E++ I G ++S+ +P + Sbjct: 362 NLGSIYHRSGLPKDLDKEIKIGK------FNARDDEIILENWSHLYKQTQSKLDLEENDAVEEIFKKTEKDKGLKNNIVGYYLSQGLPDI 613
BLAST of EMLSAG00000000957 vs. L. salmonis peptides
Match: EMLSAP00000000957 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1166:81172:83346:-1 gene:EMLSAG00000000957 transcript:EMLSAT00000000957 description:"augustus_masked-LSalAtl2s1166-processed-gene-0.16") HSP 1 Score: 1118.22 bits (2891), Expect = 0.000e+0 Identity = 562/562 (100.00%), Postives = 562/562 (100.00%), Query Frame = 0 Query: 1 MDEIPLPPNEPSYSPSHVTSSPEAPSANMGTTPPSGEKVVPVLGKEKAKKRLLAFSKGISFGLKSRNNRIQSSKDNPVVENDEDENESELCFSSTTNNFSSSSLNSSSVKKLNIDSIMEEEKELAANRPNLSYIPARSASSHVMSAVPQLIVPVLPPNALIPQIPPSSFEKLRKDLIIXSMTDTLGNTLIIIPDGAIGMGLQVFEPDFPKFKRRLDRDHGRLSCVESRKRTNLNIVKSGDEFIWKEYVRDPVASDNELAFRGLSPKIVQNYSMEAIQDLLWSLDSEYHYKEFPKDANKKIKGRYSVTFCYNPRFYQTKYETRSDILQDEEEQSRFEHILESLFKKKEEEMNNSKFISGSFVSKEIPRVEQRQWYKKIENFMIEKETIFPEVLKARQKEGFVPSKQVIKATVSKYKISMEVKVXXXXKSKDNNIPLSSVFEKMDTDLRKESFDDGGXTNEEEQEDFPENLDELLSSKKSQSSKSSKKKKRKKDYEDDDEEDELLNNEDLLNESDKVLINEENEKKEPSSHSKKSKKHKSEIKSDHEKRTDSKKKKRRRNVKSL 562 MDEIPLPPNEPSYSPSHVTSSPEAPSANMGTTPPSGEKVVPVLGKEKAKKRLLAFSKGISFGLKSRNNRIQSSKDNPVVENDEDENESELCFSSTTNNFSSSSLNSSSVKKLNIDSIMEEEKELAANRPNLSYIPARSASSHVMSAVPQLIVPVLPPNALIPQIPPSSFEKLRKDLIIXSMTDTLGNTLIIIPDGAIGMGLQVFEPDFPKFKRRLDRDHGRLSCVESRKRTNLNIVKSGDEFIWKEYVRDPVASDNELAFRGLSPKIVQNYSMEAIQDLLWSLDSEYHYKEFPKDANKKIKGRYSVTFCYNPRFYQTKYETRSDILQDEEEQSRFEHILESLFKKKEEEMNNSKFISGSFVSKEIPRVEQRQWYKKIENFMIEKETIFPEVLKARQKEGFVPSKQVIKATVSKYKISMEVKVXXXXKSKDNNIPLSSVFEKMDTDLRKESFDDGGXTNEEEQEDFPENLDELLSSKKSQSSKSSKKKKRKKDYEDDDEEDELLNNEDLLNESDKVLINEENEKKEPSSHSKKSKKHKSEIKSDHEKRTDSKKKKRRRNVKSL Sbjct: 1 MDEIPLPPNEPSYSPSHVTSSPEAPSANMGTTPPSGEKVVPVLGKEKAKKRLLAFSKGISFGLKSRNNRIQSSKDNPVVENDEDENESELCFSSTTNNFSSSSLNSSSVKKLNIDSIMEEEKELAANRPNLSYIPARSASSHVMSAVPQLIVPVLPPNALIPQIPPSSFEKLRKDLIIXSMTDTLGNTLIIIPDGAIGMGLQVFEPDFPKFKRRLDRDHGRLSCVESRKRTNLNIVKSGDEFIWKEYVRDPVASDNELAFRGLSPKIVQNYSMEAIQDLLWSLDSEYHYKEFPKDANKKIKGRYSVTFCYNPRFYQTKYETRSDILQDEEEQSRFEHILESLFKKKEEEMNNSKFISGSFVSKEIPRVEQRQWYKKIENFMIEKETIFPEVLKARQKEGFVPSKQVIKATVSKYKISMEVKVXXXXKSKDNNIPLSSVFEKMDTDLRKESFDDGGXTNEEEQEDFPENLDELLSSKKSQSSKSSKKKKRKKDYEDDDEEDELLNNEDLLNESDKVLINEENEKKEPSSHSKKSKKHKSEIKSDHEKRTDSKKKKRRRNVKSL 562 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000957 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000000957 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 3
BLAST of EMLSAG00000000957 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000000957 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000957 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000000957 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000000957 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1166:81172..83346- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000957-683723 ID=EMLSAG00000000957-683723|Name=EMLSAG00000000957|organism=Lepeophtheirus salmonis|type=gene|length=2175bp|location=Sequence derived from alignment at LSalAtl2s1166:81172..83346- (Lepeophtheirus salmonis)back to top Add to Basket
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