EMLSAG00000001023, EMLSAG00000001023-683789 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000001023 vs. C. finmarchicus
Match: gi|592902785|gb|GAXK01055590.1| (TSA: Calanus finmarchicus comp2065742_c0_seq1 transcribed RNA sequence) HSP 1 Score: 68.9366 bits (167), Expect = 2.435e-14 Identity = 38/95 (40.00%), Postives = 58/95 (61.05%), Query Frame = 0 Query: 1 MSWSVSNLLERHKGALSRD-PNFVMVVSELVSKGIVSYSEEGHILAELDFDLRGEIFTRIFSRKGFNAFRELCSILEERSPHFLTSLLLDTTGWL 94 ++ S++ LLERHK L+++ ++S L K ++S E+ IL E +L G+I + SRKG +A R+ C++LE PH LT LLLD+T L Sbjct: 276 VAKSIAKLLERHKSVLAQELGENSTLLSRLGDKAVLSILEQRAILGEERQEL*GDILVEMISRKGSSALRQFCTVLETEFPHLLTQLLLDSTARL 560
BLAST of EMLSAG00000001023 vs. C. finmarchicus
Match: gi|592902783|gb|GAXK01055592.1| (TSA: Calanus finmarchicus comp2065742_c0_seq3 transcribed RNA sequence) HSP 1 Score: 41.9726 bits (97), Expect = 5.105e-9 Identity = 19/33 (57.58%), Postives = 24/33 (72.73%), Query Frame = 0 Query: 62 RKGFNAFRELCSILEERSPHFLTSLLLDTTGWL 94 +KGF+AF LC++LE PH LT LLLD+T L Sbjct: 163 QKGFSAFWHLCTVLETEFPHLLTQLLLDSTARL 261 HSP 2 Score: 36.1946 bits (82), Expect = 5.105e-9 Identity = 23/63 (36.51%), Postives = 37/63 (58.73%), Query Frame = 0 Query: 4 SVSNLLERHKGALSRD-PNFVMVVSELVSKGIVSYSEEGHILAELDFDLRGEIFTRIFSRKGF 65 S++ LLERHK L+++ ++S L +K ++S E+ I E +LRG+I I SR+ F Sbjct: 249 SIAKLLERHKSVLAQELGENSTLLSLLGAKEVLSMLEKRAIRGEEKQELRGDILVEIISRRVF 437
BLAST of EMLSAG00000001023 vs. C. finmarchicus
Match: gi|592902784|gb|GAXK01055591.1| (TSA: Calanus finmarchicus comp2065742_c0_seq2 transcribed RNA sequence) HSP 1 Score: 48.9062 bits (115), Expect = 3.686e-7 Identity = 35/94 (37.23%), Postives = 57/94 (60.64%), Query Frame = 0 Query: 1 MSWSVSNLLERHKGALSRD-PNFVMVVSELVSKGIVSYSEEGHILAELDFDLRGEIFTRIFSRKGFNAFRELCSILEERSPHFLTSLLLDTTGW 93 ++ S++ LLERHK L+++ ++S L K ++S E+ IL E +L G+I + SRKG +A R+ C++LE H LT LLLD++ + Sbjct: 182 VAKSIAKLLERHKSVLAQELGENSTLLSRLGDKAVLSILEQRAILGEERQEL*GDILVEMISRKGSSALRQFCTVLETEFLHLLTQLLLDSSSF 463
BLAST of EMLSAG00000001023 vs. C. finmarchicus
Match: gi|592899751|gb|GAXK01058624.1| (TSA: Calanus finmarchicus comp588439_c0_seq3 transcribed RNA sequence) HSP 1 Score: 31.187 bits (69), Expect = 5.097e-1 Identity = 18/47 (38.30%), Postives = 24/47 (51.06%), Query Frame = 0 Query: 53 GEIFTRIFSRKGFNAFRELCSILEERSPHFLTSLLLDTTGWLGDPLS 99 G +F + SRKGF A S P LT+ +L T W+GD +S Sbjct: 584 GALFMCLDSRKGFIAKMSSPSFATFALPRLLTATILSVTPWVGDTVS 724
BLAST of EMLSAG00000001023 vs. C. finmarchicus
Match: gi|592906555|gb|GAXK01051820.1| (TSA: Calanus finmarchicus comp29355_c0_seq2 transcribed RNA sequence) HSP 1 Score: 30.8018 bits (68), Expect = 7.205e-1 Identity = 14/31 (45.16%), Postives = 22/31 (70.97%), Query Frame = 0 Query: 5 VSNLLERHKGALSRDPNFVMVVSELVSKGIV 35 ++NL+ + L RDP F++V+S LVS G+V Sbjct: 45 MTNLVWKRASWLLRDPTFMVVMSGLVSAGMV 137
BLAST of EMLSAG00000001023 vs. C. finmarchicus
Match: gi|592906556|gb|GAXK01051819.1| (TSA: Calanus finmarchicus comp29355_c0_seq1 transcribed RNA sequence) HSP 1 Score: 30.8018 bits (68), Expect = 7.340e-1 Identity = 14/31 (45.16%), Postives = 22/31 (70.97%), Query Frame = 0 Query: 5 VSNLLERHKGALSRDPNFVMVVSELVSKGIV 35 ++NL+ + L RDP F++V+S LVS G+V Sbjct: 45 MTNLVWKRASWLLRDPTFMVVMSGLVSAGMV 137
BLAST of EMLSAG00000001023 vs. C. finmarchicus
Match: gi|592899750|gb|GAXK01058625.1| (TSA: Calanus finmarchicus comp588439_c0_seq4 transcribed RNA sequence) HSP 1 Score: 28.8758 bits (63), Expect = 3.208e+0 Identity = 16/39 (41.03%), Postives = 20/39 (51.28%), Query Frame = 0 Query: 61 SRKGFNAFRELCSILEERSPHFLTSLLLDTTGWLGDPLS 99 SRKGF A S P LT+ +L T W+GD +S Sbjct: 584 SRKGFIAKMSSPSFATFALPRLLTATILSVTPWVGDTVS 700
BLAST of EMLSAG00000001023 vs. C. finmarchicus
Match: gi|592892333|gb|GAXK01066042.1| (TSA: Calanus finmarchicus comp4176_c0_seq1 transcribed RNA sequence) HSP 1 Score: 28.1054 bits (61), Expect = 7.244e+0 Identity = 20/69 (28.99%), Postives = 34/69 (49.28%), Query Frame = 0 Query: 10 ERHKGALSRDPNFVMVVSELVSKGIVSYSEEGHILAELDFDLRGEIFTRIFSR-----KGFNAFRELCS 73 + H+G++ R P+F + + + V S E H+++ L L +F + S+ FN FRE CS Sbjct: 1772 QMHQGSVVRVPHFGVDIGFQFFQATVVISLEHHLISNLQIFL-DSLFKDLCSKVSTNFSNFNIFRECCS 1975
BLAST of EMLSAG00000001023 vs. C. finmarchicus
Match: gi|592769965|gb|GAXK01184603.1| (TSA: Calanus finmarchicus comp135926_c1_seq2 transcribed RNA sequence) HSP 1 Score: 28.1054 bits (61), Expect = 9.079e+0 Identity = 16/63 (25.40%), Postives = 24/63 (38.10%), Query Frame = 0 Query: 44 LAELDFDLRGEIFTRIFSRKGFNAFRELCSILEERSPHFLTSLLLDTTGWLGDPLSFMCSCVG 106 L +DF G ++ R G E + PHF + ++L+T G G C G Sbjct: 6031 LISIDFVHDGIYTCQVKMRTGGPTLSESARVRVIEKPHFKSKMMLETLGEFGKEFEIPCDVAG 6219
BLAST of EMLSAG00000001023 vs. C. finmarchicus
Match: gi|592769966|gb|GAXK01184602.1| (TSA: Calanus finmarchicus comp135926_c1_seq1 transcribed RNA sequence) HSP 1 Score: 28.1054 bits (61), Expect = 9.079e+0 Identity = 16/63 (25.40%), Postives = 24/63 (38.10%), Query Frame = 0 Query: 44 LAELDFDLRGEIFTRIFSRKGFNAFRELCSILEERSPHFLTSLLLDTTGWLGDPLSFMCSCVG 106 L +DF G ++ R G E + PHF + ++L+T G G C G Sbjct: 6046 LISIDFVHDGIYTCQVKMRTGGPTLSESARVRVIEKPHFKSKMMLETLGEFGKEFEIPCDVAG 6234
BLAST of EMLSAG00000001023 vs. L. salmonis peptides
Match: EMLSAP00000001023 (pep:novel supercontig:LSalAtl2s:LSalAtl2s116:829343:837050:1 gene:EMLSAG00000001023 transcript:EMLSAT00000001023 description:"maker-LSalAtl2s116-augustus-gene-8.47") HSP 1 Score: 224.172 bits (570), Expect = 1.658e-76 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 Query: 1 MSWSVSNLLERHKGALSRDPNFVMVVSELVSKGIVSYSEEGHILAELDFDLRGEIFTRIFSRKGFNAFRELCSILEERSPHFLTSLLLDTTGWLGDPLSFMCSCVGVVQL 110 MSWSVSNLLERHKGALSRDPNFVMVVSELVSKGIVSYSEEGHILAELDFDLRGEIFTRIFSRKGFNAFRELCSILEERSPHFLTSLLLDTTGWLGDPLSFMCSCVGVVQL Sbjct: 1 MSWSVSNLLERHKGALSRDPNFVMVVSELVSKGIVSYSEEGHILAELDFDLRGEIFTRIFSRKGFNAFRELCSILEERSPHFLTSLLLDTTGWLGDPLSFMCSCVGVVQL 110
BLAST of EMLSAG00000001023 vs. Select Arthropod Genomes
Match: gb|KFM60392.1| (hypothetical protein X975_16367, partial [Stegodyphus mimosarum]) HSP 1 Score: 54.6842 bits (130), Expect = 1.306e-9 Identity = 33/93 (35.48%), Postives = 48/93 (51.61%), Query Frame = 0 Query: 4 SVSNLLERHKGALSRDPNFVMVVSELVSKGIVSYSEEGHILAELDFDLRGEIFTRIFSRKGFNAFRELCSILEERSPHFLTSLLLDTTGWLGD 96 SV LLERHK + D + ++++ +L S G++S E + R + I S KG++AF++LC LE PH LT LD G D Sbjct: 3 SVGRLLERHKKEFN-DLDAILLLQKLESVGVISADERRQLQEVASSSKRTDGLITIISSKGYSAFQDLCLSLESVCPHLLTKFALDIAGSESD 94
BLAST of EMLSAG00000001023 vs. nr
Match: gi|1126180443|ref|XP_019622663.1| (PREDICTED: tight junction protein ZO-1-like [Branchiostoma belcheri]) HSP 1 Score: 76.2554 bits (186), Expect = 6.505e-14 Identity = 36/84 (42.86%), Postives = 52/84 (61.90%), Query Frame = 0 Query: 6 SNLLERHKGALSRDPNFVMVVSELVSKGIVSYSEEGHILAELDFDLRGEIFTRIFSRKGFNAFRELCSILEERSPHFLTSLLLD 89 + LL +H+ A+++D + ++ LV G+ S EEG IL+E L+ E+F + SRKG AF+E CS LE+ PH LT LLD Sbjct: 9 ARLLAKHRAAIAQDLDVAKILPSLVYTGVFSLVEEGEILSERTRQLQTEVFVDLLSRKGPAAFQEFCSALEDSFPHLLTCFLLD 92
BLAST of EMLSAG00000001023 vs. nr
Match: gi|260816618|ref|XP_002603185.1| (hypothetical protein BRAFLDRAFT_93411 [Branchiostoma floridae] >gi|229288502|gb|EEN59196.1| hypothetical protein BRAFLDRAFT_93411 [Branchiostoma floridae]) HSP 1 Score: 75.485 bits (184), Expect = 9.139e-14 Identity = 36/84 (42.86%), Postives = 51/84 (60.71%), Query Frame = 0 Query: 6 SNLLERHKGALSRDPNFVMVVSELVSKGIVSYSEEGHILAELDFDLRGEIFTRIFSRKGFNAFRELCSILEERSPHFLTSLLLD 89 + LL +H+ A+ +D + ++ LV G+ S EEG IL+E L+ E+F + SRKG AF+E CS LE+ PH LT LLD Sbjct: 9 ARLLAKHRAAIVQDLDVAKIIPSLVYTGVFSLVEEGEILSERTRQLQTEVFVDLLSRKGPAAFQEFCSALEDSFPHLLTCFLLD 92
BLAST of EMLSAG00000001023 vs. nr
Match: gi|918312123|gb|KOF82410.1| (hypothetical protein OCBIM_22025337mg, partial [Octopus bimaculoides]) HSP 1 Score: 67.781 bits (164), Expect = 1.059e-12 Identity = 35/88 (39.77%), Postives = 49/88 (55.68%), Query Frame = 0 Query: 5 VSNLLERHKGALSRDPNFVMVVSELVSKGIVSYSEEGHILAELDFDLRGEIFTRIFSRKGFNAFRELCSILEERSPHFLTSLLLDTTG 92 +S L+ +HK + D + + V+ LV K +++ EE I + D R E+F I S KG A E C LE+ +PH LTS LLD TG Sbjct: 7 ISRLIAKHKSTIINDLDVLKVLPRLVHKSVLTAGEEHEISSHGDSKTRAEVFLDILSDKGETAMHEFCVGLEDTAPHLLTSFLLDNTG 94
BLAST of EMLSAG00000001023 vs. nr
Match: gi|762106448|ref|XP_011435813.1| (PREDICTED: tight junction protein ZO-1-like isoform X12 [Crassostrea gigas]) HSP 1 Score: 70.0922 bits (170), Expect = 8.748e-12 Identity = 35/90 (38.89%), Postives = 53/90 (58.89%), Query Frame = 0 Query: 5 VSNLLERHKGALSRDPNFVMVVSELVSKGIVSYSEEGHILAELDFDLRGEIFTRIFSRKGFNAFRELCSILEERSPHFLTSLLLDTTGWL 94 V+ LL RH+ +L RD + ++ LV+K ++S SEE +L D R E+ I ++G AF + CS LE+ +PH LT LL+ +G L Sbjct: 7 VTRLLTRHRASLVRDLDTNKILPHLVAKEVISTSEERQVLDVSDPRERTEVLLDIVGKRGLGAFHDFCSCLEKVAPHLLTGFLLEHSGSL 96
BLAST of EMLSAG00000001023 vs. nr
Match: gi|762106446|ref|XP_011435812.1| (PREDICTED: tight junction protein ZO-1-like isoform X11 [Crassostrea gigas]) HSP 1 Score: 70.0922 bits (170), Expect = 8.757e-12 Identity = 35/90 (38.89%), Postives = 53/90 (58.89%), Query Frame = 0 Query: 5 VSNLLERHKGALSRDPNFVMVVSELVSKGIVSYSEEGHILAELDFDLRGEIFTRIFSRKGFNAFRELCSILEERSPHFLTSLLLDTTGWL 94 V+ LL RH+ +L RD + ++ LV+K ++S SEE +L D R E+ I ++G AF + CS LE+ +PH LT LL+ +G L Sbjct: 7 VTRLLTRHRASLVRDLDTNKILPHLVAKEVISTSEERQVLDVSDPRERTEVLLDIVGKRGLGAFHDFCSCLEKVAPHLLTGFLLEHSGSL 96
BLAST of EMLSAG00000001023 vs. nr
Match: gi|762106434|ref|XP_011435806.1| (PREDICTED: uncharacterized protein LOC105334159 isoform X7 [Crassostrea gigas]) HSP 1 Score: 70.0922 bits (170), Expect = 8.820e-12 Identity = 35/90 (38.89%), Postives = 53/90 (58.89%), Query Frame = 0 Query: 5 VSNLLERHKGALSRDPNFVMVVSELVSKGIVSYSEEGHILAELDFDLRGEIFTRIFSRKGFNAFRELCSILEERSPHFLTSLLLDTTGWL 94 V+ LL RH+ +L RD + ++ LV+K ++S SEE +L D R E+ I ++G AF + CS LE+ +PH LT LL+ +G L Sbjct: 7 VTRLLTRHRASLVRDLDTNKILPHLVAKEVISTSEERQVLDVSDPRERTEVLLDIVGKRGLGAFHDFCSCLEKVAPHLLTGFLLEHSGSL 96
BLAST of EMLSAG00000001023 vs. nr
Match: gi|762106432|ref|XP_011435805.1| (PREDICTED: uncharacterized protein LOC105334159 isoform X6 [Crassostrea gigas]) HSP 1 Score: 70.0922 bits (170), Expect = 8.823e-12 Identity = 35/90 (38.89%), Postives = 53/90 (58.89%), Query Frame = 0 Query: 5 VSNLLERHKGALSRDPNFVMVVSELVSKGIVSYSEEGHILAELDFDLRGEIFTRIFSRKGFNAFRELCSILEERSPHFLTSLLLDTTGWL 94 V+ LL RH+ +L RD + ++ LV+K ++S SEE +L D R E+ I ++G AF + CS LE+ +PH LT LL+ +G L Sbjct: 7 VTRLLTRHRASLVRDLDTNKILPHLVAKEVISTSEERQVLDVSDPRERTEVLLDIVGKRGLGAFHDFCSCLEKVAPHLLTGFLLEHSGSL 96
BLAST of EMLSAG00000001023 vs. nr
Match: gi|762106430|ref|XP_011435803.1| (PREDICTED: tight junction protein ZO-1-like isoform X5 [Crassostrea gigas]) HSP 1 Score: 70.0922 bits (170), Expect = 8.826e-12 Identity = 35/90 (38.89%), Postives = 53/90 (58.89%), Query Frame = 0 Query: 5 VSNLLERHKGALSRDPNFVMVVSELVSKGIVSYSEEGHILAELDFDLRGEIFTRIFSRKGFNAFRELCSILEERSPHFLTSLLLDTTGWL 94 V+ LL RH+ +L RD + ++ LV+K ++S SEE +L D R E+ I ++G AF + CS LE+ +PH LT LL+ +G L Sbjct: 7 VTRLLTRHRASLVRDLDTNKILPHLVAKEVISTSEERQVLDVSDPRERTEVLLDIVGKRGLGAFHDFCSCLEKVAPHLLTGFLLEHSGSL 96
BLAST of EMLSAG00000001023 vs. nr
Match: gi|762106428|ref|XP_011435802.1| (PREDICTED: uncharacterized protein LOC105334159 isoform X4 [Crassostrea gigas]) HSP 1 Score: 70.0922 bits (170), Expect = 8.830e-12 Identity = 35/90 (38.89%), Postives = 53/90 (58.89%), Query Frame = 0 Query: 5 VSNLLERHKGALSRDPNFVMVVSELVSKGIVSYSEEGHILAELDFDLRGEIFTRIFSRKGFNAFRELCSILEERSPHFLTSLLLDTTGWL 94 V+ LL RH+ +L RD + ++ LV+K ++S SEE +L D R E+ I ++G AF + CS LE+ +PH LT LL+ +G L Sbjct: 7 VTRLLTRHRASLVRDLDTNKILPHLVAKEVISTSEERQVLDVSDPRERTEVLLDIVGKRGLGAFHDFCSCLEKVAPHLLTGFLLEHSGSL 96
BLAST of EMLSAG00000001023 vs. nr
Match: gi|762106426|ref|XP_011435801.1| (PREDICTED: uncharacterized protein LOC105334159 isoform X3 [Crassostrea gigas]) HSP 1 Score: 70.0922 bits (170), Expect = 8.830e-12 Identity = 35/90 (38.89%), Postives = 53/90 (58.89%), Query Frame = 0 Query: 5 VSNLLERHKGALSRDPNFVMVVSELVSKGIVSYSEEGHILAELDFDLRGEIFTRIFSRKGFNAFRELCSILEERSPHFLTSLLLDTTGWL 94 V+ LL RH+ +L RD + ++ LV+K ++S SEE +L D R E+ I ++G AF + CS LE+ +PH LT LL+ +G L Sbjct: 7 VTRLLTRHRASLVRDLDTNKILPHLVAKEVISTSEERQVLDVSDPRERTEVLLDIVGKRGLGAFHDFCSCLEKVAPHLLTGFLLEHSGSL 96 The following BLAST results are available for this feature:
BLAST of EMLSAG00000001023 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000001023 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 10
BLAST of EMLSAG00000001023 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000001023 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000001023 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 1
BLAST of EMLSAG00000001023 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000001023 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s116:829343..837050+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000001023-683789 ID=EMLSAG00000001023-683789|Name=EMLSAG00000001023|organism=Lepeophtheirus salmonis|type=gene|length=7708bp|location=Sequence derived from alignment at LSalAtl2s116:829343..837050+ (Lepeophtheirus salmonis)back to top Add to Basket
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