EMLSAG00000001037, EMLSAG00000001037-683803 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000001037 vs. C. finmarchicus
Match: gi|592939240|gb|GAXK01019313.1| (TSA: Calanus finmarchicus comp80563_c0_seq1 transcribed RNA sequence) HSP 1 Score: 42.3578 bits (98), Expect = 6.942e-4 Identity = 30/109 (27.52%), Postives = 52/109 (47.71%), Query Frame = 0 Query: 22 NIGESLENLRNDTRNSDLHFLVYNSKGLESRILAHQFIFIPKSNLLRKLCYEVKGKHGISEPVVITLIGFKSIAVEALISYFYYGHTNLKL--MDSFCDLCRTLGISNI 128 N+ E L N R + D+ +++ + AH+ I SN +K+ I + ++ L G K +EA+ISY Y+G TN+ L +D+F ++ L I + Sbjct: 719 NLSEGLRNFRTENNFCDVTLACEDNQ-----LQAHKVILSASSNFFKKVLTT-----NIHQHPLLYLKGVKMSDLEAIISYIYHGETNVALGELDTFLEVATELQIKGL 1015
BLAST of EMLSAG00000001037 vs. C. finmarchicus
Match: gi|592842136|gb|GAXK01115408.1| (TSA: Calanus finmarchicus comp4351477_c0_seq1 transcribed RNA sequence) HSP 1 Score: 35.4242 bits (80), Expect = 7.071e-2 Identity = 25/83 (30.12%), Postives = 40/83 (48.19%), Query Frame = 0 Query: 48 GLESRILAHQFIFIPKSNLLRKLCYEVKGKHGISEPVVITLIGFKSIAVEALISYFYYG--HTNLKLMDSFCDLCRTLGISNI 128 G E R+ AH+F+ S + + E ++ P I L GF+ V ALI Y Y+G H ++ +D F + L I+ + Sbjct: 58 GSEGRVSAHKFMLSNASPVFENILSEC----SVTAPF-IYLRGFEFEDVSALIRYIYFGEVHIAVEKLDRFLATAKELKINGL 291
BLAST of EMLSAG00000001037 vs. C. finmarchicus
Match: gi|592808510|gb|GAXK01146058.1| (TSA: Calanus finmarchicus comp398749_c4_seq2 transcribed RNA sequence) HSP 1 Score: 36.1946 bits (82), Expect = 1.023e-1 Identity = 23/84 (27.38%), Postives = 37/84 (44.05%), Query Frame = 0 Query: 91 FKSIAVEALISYFYYGHTNLKLMDSFCDLCRTLGISNINKISLEYIPVHDNTDLVDPWGNTKTP--RHHSNTKIFTNYNLSEYD 172 ++ + E L + H ++ SFCD+C + ++ I ++ V N D D G+TK RH S T +N E D Sbjct: 1442 YEGTSRECLRKHKQVKHEGVRYKCSFCDVCYSTPVALTKHIRAQHEGVRYNCDKCDYQGSTKEQLKRHTSTTHEGLRFNCDECD 1693
BLAST of EMLSAG00000001037 vs. C. finmarchicus
Match: gi|592808511|gb|GAXK01146057.1| (TSA: Calanus finmarchicus comp398749_c4_seq1 transcribed RNA sequence) HSP 1 Score: 36.1946 bits (82), Expect = 1.092e-1 Identity = 23/84 (27.38%), Postives = 37/84 (44.05%), Query Frame = 0 Query: 91 FKSIAVEALISYFYYGHTNLKLMDSFCDLCRTLGISNINKISLEYIPVHDNTDLVDPWGNTKTP--RHHSNTKIFTNYNLSEYD 172 ++ + E L + H ++ SFCD+C + ++ I ++ V N D D G+TK RH S T +N E D Sbjct: 2459 YEGTSRECLRKHKQVKHEGVRYKCSFCDVCYSTPVALTKHIRAQHEGVRYNCDKCDYQGSTKEQLKRHTSTTHEGLRFNCDECD 2710
BLAST of EMLSAG00000001037 vs. C. finmarchicus
Match: gi|592891349|gb|GAXK01067026.1| (TSA: Calanus finmarchicus comp5364_c33_seq3 transcribed RNA sequence) HSP 1 Score: 34.6538 bits (78), Expect = 1.168e-1 Identity = 32/124 (25.81%), Postives = 59/124 (47.58%), Query Frame = 0 Query: 22 NIGESLENLRNDTRNSDLHFLVYNSKGLESRILAHQFIFIPKSNLLRKLCYEVKGKHGISEPVVITLIGFKSIAVEALISYFYYGHTNLKL--MDSFCDLCRTL---GISNINKISLEYIPVHD 140 NIG SL +LRN+ D+ +++ +E AH+ I S+ + + + +H P +I L G K ++A+I + Y+G + ++ F L G++N +KI E ++D Sbjct: 26 NIGNSLRDLRNECDFFDVTIASDDNEQIE----AHKLILSASSSFFKTVLKNNRHQH----P-LIYLKGIKMTNIKAMIDFMYHGQVEVGQDGLNEFLAAAEELKVKGLTNGDKIRAEESYLND 370
BLAST of EMLSAG00000001037 vs. C. finmarchicus
Match: gi|592891346|gb|GAXK01067029.1| (TSA: Calanus finmarchicus comp5364_c37_seq2 transcribed RNA sequence) HSP 1 Score: 34.2686 bits (77), Expect = 1.748e-1 Identity = 31/118 (26.27%), Postives = 56/118 (47.46%), Query Frame = 0 Query: 22 NIGESLENLRNDTRNSDLHFLVYNSKGLESRILAHQFIFIPKSNLLRKLCYEVKGKHGISEPVVITLIGFKSIAVEALISYFYYGHTNLKL--MDSFCDLCRTL---GISNINKISLE 134 NIG SL +LRN+ D+ +++ +E AH+ I S+ + + + +H P +I L G K ++A+I + Y+G + ++ F L G++N +KI E Sbjct: 72 NIGNSLRDLRNECDFFDVTIASDDNEQIE----AHKLILSASSSFFKTVLKNNRHQH----P-LIYLKGIKMTNIKAMIDFMYHGQVEVGQDGLNEFLAAAEELKVKGLTNGDKIRAE 398
BLAST of EMLSAG00000001037 vs. C. finmarchicus
Match: gi|592908719|gb|GAXK01049656.1| (TSA: Calanus finmarchicus comp1088767_c0_seq1 transcribed RNA sequence) HSP 1 Score: 34.6538 bits (78), Expect = 2.299e-1 Identity = 33/119 (27.73%), Postives = 53/119 (44.54%), Query Frame = 0 Query: 16 IIFCFYNIGE----SLENLRNDTRNSDLHFLVYNSKGLESRILAHQFIFIPKSNLLRKLCYEVKGKHGISEPVVITLIGFKSIAVEALISYFYYGHTNLKL--MDSFCDLCRTLGISNI 128 + F F N E ++++L ND+ NSD+ G E +I AH+F+ S + K+ E P I + GF+ + AL+ Y Y G + + +DSF L I + Sbjct: 641 VSFQFQNFPEHAVNTVKSLFNDS-NSDVTLTC----GSEGQINAHKFLLSSASPVFEKILSECS-----VTPQTIYMRGFQYEDLSALVQYMYLGEVYIPVDKLDSFISTAIELKIKGL 967
BLAST of EMLSAG00000001037 vs. C. finmarchicus
Match: gi|592891347|gb|GAXK01067028.1| (TSA: Calanus finmarchicus comp5364_c37_seq1 transcribed RNA sequence) HSP 1 Score: 34.6538 bits (78), Expect = 2.328e-1 Identity = 30/118 (25.42%), Postives = 54/118 (45.76%), Query Frame = 0 Query: 22 NIGESLENLRNDTRNSDLHFLVYNSKGLESRILAHQFIFIPKSNLLRKLCYEVKGKHGISEPVVITLIGFKSIAVEALISYFYYGHTNLKL--MDSFCDLCRTL---GISNINKISLE 134 NIG SL +LRN+ D+ +++ +E AH+ I S+ + + + +H + I L G K ++A+I + Y+G + ++ F L G++N KI E Sbjct: 72 NIGNSLRDLRNECDFFDVTIASDDNEQIE----AHKLILSASSSFFKTVLKNNRHQHPL-----IYLKGIKMTNIKAMIDFMYHGQVEVGQDGLNEFLAAAEELKVKGLTNGGKIKSE 398
BLAST of EMLSAG00000001037 vs. C. finmarchicus
Match: gi|592908718|gb|GAXK01049657.1| (TSA: Calanus finmarchicus comp1088767_c0_seq2 transcribed RNA sequence) HSP 1 Score: 34.6538 bits (78), Expect = 2.579e-1 Identity = 33/119 (27.73%), Postives = 53/119 (44.54%), Query Frame = 0 Query: 16 IIFCFYNIGE----SLENLRNDTRNSDLHFLVYNSKGLESRILAHQFIFIPKSNLLRKLCYEVKGKHGISEPVVITLIGFKSIAVEALISYFYYGHTNLKL--MDSFCDLCRTLGISNI 128 + F F N E ++++L ND+ NSD+ G E +I AH+F+ S + K+ E P I + GF+ + AL+ Y Y G + + +DSF L I + Sbjct: 617 VSFQFQNFPEHAVNTVKSLFNDS-NSDVTLTC----GSEGQINAHKFLLSSASPVFEKILSECS-----VTPQTIYMRGFQYEDLSALVQYMYLGEVYIPVDKLDSFISTAIELKIKGL 943
BLAST of EMLSAG00000001037 vs. C. finmarchicus
Match: gi|592790669|gb|GAXK01163899.1| (TSA: Calanus finmarchicus comp383846_c3_seq1 transcribed RNA sequence) HSP 1 Score: 33.4982 bits (75), Expect = 5.618e-1 Identity = 23/92 (25.00%), Postives = 48/92 (52.17%), Query Frame = 0 Query: 53 ILAHQFIFIPKSNLLRKLCYEVK-GKHGISEPVVITLIGFKSIAVEALISYFYYGHTNLKLMD--SFCDLCRTLGISNINKISLEYIPVHDN 141 I AH+ + I S + L +K G+H + +++ + FK + +AL+ Y YYG ++ D S +TL + ++ ++S + +++N Sbjct: 158 IQAHKLVLIACSEYFKVLLTPLKEGQHPL---IILEGVNFKEL--KALLDYMYYGEVSVSKSDLPSLIKSSKTLKVKSLGEVSNQLARLNEN 418
BLAST of EMLSAG00000001037 vs. L. salmonis peptides
Match: EMLSAP00000001037 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1171:93755:95025:1 gene:EMLSAG00000001037 transcript:EMLSAT00000001037 description:"augustus_masked-LSalAtl2s1171-processed-gene-1.8") HSP 1 Score: 487.649 bits (1254), Expect = 2.821e-176 Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0 Query: 1 MKYVNLKCLGSHWKXIIFCFYNIGESLENLRNDTRNSDLHFLVYNSKGLESRILAHQFIFIPKSNLLRKLCYEVKGKHGISEPVVITLIGFKSIAVEALISYFYYGHTNLKLMDSFCDLCRTLGISNINKISLEYIPVHDNTDLVDPWGNTKTPRHHSNTKIFTNYNLSEYDSIVLLNDKKIFCPPKVSLLKELVKRDSSLKEDPFLSTENPGSNCPTLFKPHSLLQSHTNNYAKDKSDK 240 MKYVNLKCLGSHWKXIIFCFYNIGESLENLRNDTRNSDLHFLVYNSKGLESRILAHQFIFIPKSNLLRKLCYEVKGKHGISEPVVITLIGFKSIAVEALISYFYYGHTNLKLMDSFCDLCRTLGISNINKISLEYIPVHDNTDLVDPWGNTKTPRHHSNTKIFTNYNLSEYDSIVLLNDKKIFCPPKVSLLKELVKRDSSLKEDPFLSTENPGSNCPTLFKPHSLLQSHTNNYAKDKSDK Sbjct: 1 MKYVNLKCLGSHWKXIIFCFYNIGESLENLRNDTRNSDLHFLVYNSKGLESRILAHQFIFIPKSNLLRKLCYEVKGKHGISEPVVITLIGFKSIAVEALISYFYYGHTNLKLMDSFCDLCRTLGISNINKISLEYIPVHDNTDLVDPWGNTKTPRHHSNTKIFTNYNLSEYDSIVLLNDKKIFCPPKVSLLKELVKRDSSLKEDPFLSTENPGSNCPTLFKPHSLLQSHTNNYAKDKSDK 240
BLAST of EMLSAG00000001037 vs. L. salmonis peptides
Match: EMLSAP00000009767 (pep:novel supercontig:LSalAtl2s:LSalAtl2s632:219800:221127:-1 gene:EMLSAG00000009767 transcript:EMLSAT00000009767 description:"maker-LSalAtl2s632-augustus-gene-2.14") HSP 1 Score: 95.9005 bits (237), Expect = 3.319e-23 Identity = 48/109 (44.04%), Postives = 67/109 (61.47%), Query Frame = 0 Query: 22 NIGESLENLRNDTRNSDLHFLVYN-SKGLESRILAHQFIFIPKSNLLRKLCYEVKGKHGISEPVVITLIGFKSIAVEALISYFYYGHTNLKLMDSFCDLCRTLGISNIN 129 N G ++ +L N + +DL F+ N KG AHQF+F PKS LR LC E +GK IS+PV+ITL G +++A+I YFY G T+ +L D D+C LGI N++ Sbjct: 16 NFGNAVSDLLNHEKLTDLRFITVNEQKGTTKSFNAHQFLFTPKSAFLRTLCNEARGKQLISDPVIITLPGISPHSMQAVIDYFYTGITDFELRDDLEDMCLLLGIDNVD 124 The following BLAST results are available for this feature:
BLAST of EMLSAG00000001037 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000001037 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000001037 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 2
BLAST of EMLSAG00000001037 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000001037 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000001037 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000001037 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1171:93755..95025+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000001037-683803 ID=EMLSAG00000001037-683803|Name=EMLSAG00000001037|organism=Lepeophtheirus salmonis|type=gene|length=1271bp|location=Sequence derived from alignment at LSalAtl2s1171:93755..95025+ (Lepeophtheirus salmonis)back to top Add to Basket
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