EMLSAG00000001153, EMLSAG00000001153-683919 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592893579|gb|GAXK01064796.1| (TSA: Calanus finmarchicus comp4336892_c0_seq2 transcribed RNA sequence) HSP 1 Score: 41.5874 bits (96), Expect = 1.593e-4 Identity = 24/105 (22.86%), Postives = 46/105 (43.81%), Query Frame = 0 Query: 3 LFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQL-----QTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102 + CL+T A+H+E++ + F+ + G P+++ D ++KQ+ ++ + ++ KV E S + W F + W N E IFK Sbjct: 57 IICCLNTGAVHLELLHTYGAEAFLLRWKVFTCTRGDPKLVISDKGSQLQAASKQVDWTRKESPEQWEWEKV-EHATSAKGTRWHFVPAGCQWQNGLAESRIKIFK 368
BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592893580|gb|GAXK01064795.1| (TSA: Calanus finmarchicus comp4336892_c0_seq1 transcribed RNA sequence) HSP 1 Score: 41.2022 bits (95), Expect = 1.754e-4 Identity = 24/105 (22.86%), Postives = 46/105 (43.81%), Query Frame = 0 Query: 3 LFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQL-----QTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102 + CL+T A+H+E++ + F+ + G P+++ D ++KQ+ ++ + ++ KV E S + W F + W N E IFK Sbjct: 109 IICCLNTGAVHLELLHTYGAEAFLLRWKVFTCTRGDPKLVISDKGSQLQAASKQVDWTRKESPEQWEWEKV-EHATSAKGTRWHFVPAGCQWQNGLAESRIKIFK 420
BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592823516|gb|GAXK01131052.1| (TSA: Calanus finmarchicus comp3507114_c0_seq1 transcribed RNA sequence) HSP 1 Score: 39.6614 bits (91), Expect = 5.964e-4 Identity = 23/101 (22.77%), Postives = 47/101 (46.53%), Query Frame = 0 Query: 3 LFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQ-LQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102 LF CL A+ + ++ T +F+ + YG+P + Y D N V++ ++ T+ + D++++ S +W+F + + + N E FK Sbjct: 417 LFVCLQVKAVKIYLVGGLHTEDFLLAWDSFVADYGQPMVAYSDRGSNLVSAAREGGDTVPDYDWDRIA--GCSQGKTDWQFHPAGSQFRNGAVEIFVKKFK 713
BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592935729|gb|GAXK01022824.1| (TSA: Calanus finmarchicus comp1637438_c0_seq1 transcribed RNA sequence) HSP 1 Score: 40.0466 bits (92), Expect = 6.418e-4 Identity = 24/105 (22.86%), Postives = 52/105 (49.52%), Query Frame = 0 Query: 1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQ---TLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102 +A+F C +SA+ + + + S F+Q + + + KP ++Y D V + L + + +D+ K+ + ++W F+++++ W N R EA+ K Sbjct: 1183 IAVFACSLSSAVKLYVCKDYSEEGFMQVWHQHVADWAKPAMVYSDRGSQLVAAAGGLDPGDSEEELDWAKLGRKTG----VKWTFTSAQSQWKNG---RAEALVK 1476
BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592884735|gb|GAXK01073640.1| (TSA: Calanus finmarchicus comp3167281_c0_seq1 transcribed RNA sequence) HSP 1 Score: 38.5058 bits (88), Expect = 1.919e-3 Identity = 17/52 (32.69%), Postives = 26/52 (50.00%), Query Frame = 0 Query: 2 ALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTS 53 ALF CL+T A+ + + ST +F+ GKP+ +Y D RN + Sbjct: 2955 ALFCCLNTGALAIYVAAGNSTEKFLTAYSHYCSDRGKPKFVYSDRGRNLTKA 3110
BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592880223|gb|GAXK01077678.1| (TSA: Calanus finmarchicus comp5163893_c0_seq1 transcribed RNA sequence) HSP 1 Score: 36.965 bits (84), Expect = 2.154e-3 Identity = 14/64 (21.88%), Postives = 30/64 (46.88%), Query Frame = 0 Query: 3 LFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFN 66 LF CL A+ + ++ T +F+ + +G+P+I Y D N + ++ + D++ Sbjct: 174 LFVCLQVKAVKIYLVGGLHTEDFLLAWDSFVADHGQPQIAYSDRGSNLTAAAREGGDTEVPDYD 365
BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592917301|gb|GAXK01041074.1| (TSA: Calanus finmarchicus comp7409526_c0_seq1 transcribed RNA sequence) HSP 1 Score: 37.3502 bits (85), Expect = 2.757e-3 Identity = 17/70 (24.29%), Postives = 37/70 (52.86%), Query Frame = 0 Query: 3 LFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEEN 72 L CL+T A+ + I ST +F+ + +G+P ++ D N V + K++ T + D++ +++ + Sbjct: 301 LILCLNTKAVKLYIAAGYSTADFLMTFEQYPSDHGQPATVHSDRGSNLVCAAKEVDT-PDYDWDIIEKSS 507
BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592868284|gb|GAXK01089278.1| (TSA: Calanus finmarchicus comp5307518_c0_seq1 transcribed RNA sequence) HSP 1 Score: 36.965 bits (84), Expect = 3.415e-3 Identity = 13/54 (24.07%), Postives = 29/54 (53.70%), Query Frame = 0 Query: 3 LFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQ 56 LF CL A+ + ++ T +F+ + + +G+P ++Y D N V++ ++ Sbjct: 309 LFVCLQVKAVKIYLVGGLHTEDFLLSWDSFVADHGQPLVVYSDRGPNMVSAARE 470
BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592800806|gb|GAXK01153762.1| (TSA: Calanus finmarchicus comp3388558_c0_seq1 transcribed RNA sequence) HSP 1 Score: 36.965 bits (84), Expect = 5.839e-3 Identity = 18/65 (27.69%), Postives = 32/65 (49.23%), Query Frame = 0 Query: 1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDF 65 +A+F CL++ H+E+IE + T + L LYG P + D ++Q L++ +F Sbjct: 1011 VAVFACLYSRMTHLEVIEDKKTESILGALNTLGCLYGPPSCVTVDKDA------AEIQALRDSEF 1187
BLAST of EMLSAG00000001153 vs. C. finmarchicus
Match: gi|592858944|gb|GAXK01098618.1| (TSA: Calanus finmarchicus comp2801899_c0_seq1 transcribed RNA sequence) HSP 1 Score: 36.1946 bits (82), Expect = 8.890e-3 Identity = 21/93 (22.58%), Postives = 44/93 (47.31%), Query Frame = 0 Query: 6 CLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMD-FNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97 C T+A+ + I S F+Q R+ + +G+P+++Y D V++ + D + + +G ++W F+ +++ W N E M Sbjct: 579 CSVTAALKLYICRDYSEEGFLQAWRQHVCDWGEPDLVYSDRGTQLVSAAGGIDPADEEDELDWARIGRTTG--VKWVFTPAQSQWKNGRAESM 851
BLAST of EMLSAG00000001153 vs. L. salmonis peptides
Match: EMLSAP00000001153 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1190:92088:92396:-1 gene:EMLSAG00000001153 transcript:EMLSAT00000001153 description:"snap_masked-LSalAtl2s1190-processed-gene-0.16") HSP 1 Score: 214.927 bits (546), Expect = 4.030e-73 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 Query: 1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK Sbjct: 1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102
BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|KFM71562.1| (Transposable element Tcb2 transposase, partial [Stegodyphus mimosarum]) HSP 1 Score: 57.7658 bits (138), Expect = 2.718e-10 Identity = 35/102 (34.31%), Postives = 51/102 (50.00%), Query Frame = 0 Query: 1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQ----TLKNMDFNKVQEENY-SGEYIEWKFSTSEAPWTNQFTERM 97 + LFTC T A+H+E++ + S +FI LR+ I G Y DN++ F + K LQ +K DF +N+ + E WKF APW F E + Sbjct: 1485 IVLFTCAVTRALHLELVSNMSANKFILALRRFISRRGNCRTFYSDNAKTFRYAAKDLQYFYSIIKGQDF-----QNFLANEGFTWKFIVELAPWWGGFYESL 1581
BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|KFM74861.1| (hypothetical protein X975_18449, partial [Stegodyphus mimosarum]) HSP 1 Score: 55.8398 bits (133), Expect = 1.109e-9 Identity = 35/99 (35.35%), Postives = 54/99 (54.55%), Query Frame = 0 Query: 3 LFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIF 101 LFTC A+++E+IES S FI LR+ I G IIY DN NFV + L ++D+ ++ E + + I+WKF+ A W + ER++ + Sbjct: 351 LFTC----AVYLELIESLSINGFILGLRRFIARRGCSRIIYSDNGTNFVGTE---NLLGSIDWKEI-ECHSTTMRIQWKFNPPTASWWGGWCERLKKVL 441
BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|KFM61875.1| (Retrovirus-related Pol polyprotein from transposon 17.6, partial [Stegodyphus mimosarum]) HSP 1 Score: 55.0694 bits (131), Expect = 2.486e-9 Identity = 31/93 (33.33%), Postives = 49/93 (52.69%), Query Frame = 0 Query: 1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQ-----LQTLKNMDFNKVQEENYSGEYIEWKFSTSEAP 88 + LF C A+H+E++E ST+ F+ L++ I GKP IY D NF + K+ LQ +N + ++ S E I+WKF+ +P Sbjct: 2142 VCLFVCFVVKAVHLEVVEDLSTKAFLSALKRFISRRGKPSEIYSDCGTNFKGAEKEIRKCFLQCKQNQEI----QDFLSLEEIKWKFNPPSSP 2230
BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|KFM63037.1| (hypothetical protein X975_02648, partial [Stegodyphus mimosarum]) HSP 1 Score: 53.9138 bits (128), Expect = 6.765e-9 Identity = 27/97 (27.84%), Postives = 50/97 (51.55%), Query Frame = 0 Query: 1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97 + LFTC T AIH+E+++ +T+E + R+ + G +Y DN+R + +L+ + + + ++ Y+ I WK+ A W F ER+ Sbjct: 1368 ILLFTCATTRAIHLELVKGMTTQEILLAFRRFVSRRGLCSTVYSDNARTLKRAELELKQMWKVINHPEIKKFYASHGITWKYIVKRAAWWGGFYERL 1464
BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|KFM64358.1| (hypothetical protein X975_25070, partial [Stegodyphus mimosarum]) HSP 1 Score: 52.7582 bits (125), Expect = 1.109e-8 Identity = 28/71 (39.44%), Postives = 42/71 (59.15%), Query Frame = 0 Query: 1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEE 71 +A+FT A+H+E+I+S S+ FIQ LR+ I G+ +IY DN F N LK +D+N++Q E Sbjct: 213 IAIFTYAVYRAVHLELIQSVSSIAFIQTLRRFIARRGRISVIYSDNGAAFTRVN---SALKQLDWNEIQAE 280
BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|EFA13346.1| (hypothetical protein TcasGA2_TC002325 [Tribolium castaneum]) HSP 1 Score: 53.1434 bits (126), Expect = 1.198e-8 Identity = 28/92 (30.43%), Postives = 46/92 (50.00%), Query Frame = 0 Query: 1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQT----LKNMDFNKVQEENYSGEYIEWKFSTSEAP 88 + LF C+ A+H+E++ ++ F+ L++ I GKP+ I+ DN NFV + +L+ LK+ E + E I W F AP Sbjct: 1309 VCLFVCMAVKAVHIEVVSDLTSEAFLACLKRFISRRGKPKDIFSDNGLNFVGAANELRELYVFLKSESTQNKILEFLTSEKISWHFIPPRAP 1400
BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|KFM56668.1| (hypothetical protein X975_17469, partial [Stegodyphus mimosarum]) HSP 1 Score: 48.521 bits (114), Expect = 7.992e-8 Identity = 20/61 (32.79%), Postives = 36/61 (59.02%), Query Frame = 0 Query: 3 LFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNM 63 LF CL T A+H++ + +T F+ LR + G P IY +N NF+ +N++L+ ++ + Sbjct: 26 LFICLATKALHIKAVSDLTTDAFLAALRCFSAIRGAPHHIYSNNKTNFIGANRKLKEIQRL 86
BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|EFA06508.1| (hypothetical protein TcasGA2_TC009407 [Tribolium castaneum]) HSP 1 Score: 50.447 bits (119), Expect = 1.076e-7 Identity = 26/88 (29.55%), Postives = 42/88 (47.73%), Query Frame = 0 Query: 1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEENYSGEYIEWKFSTSEAP 88 + +F C T AIH+E++ ST F+ LR+ + G+ IY D NFV + ++L N+ + E + W F+ AP Sbjct: 174 ICVFLCFSTKAIHIELVSDLSTEAFLAALRRFVARRGRCSYIYSDCGTNFVGAYREL--------NRHMKSAAERERLRWHFNPPSAP 253
BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|KFM67093.1| (hypothetical protein X975_26725, partial [Stegodyphus mimosarum]) HSP 1 Score: 48.521 bits (114), Expect = 1.473e-7 Identity = 28/82 (34.15%), Postives = 45/82 (54.88%), Query Frame = 0 Query: 21 STREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAIFK 102 ST F+ LR+ I G+ IIYCDN NFV ++ L+++++ ++ ++ S I+WKF+ A W ER+ I K Sbjct: 2 STNGFLLALRRFIARRGQSRIIYCDNGTNFVGAS---NVLRDLNWKQITDDT-SIPPIQWKFNPPNASW----WERLVGILK 75
BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Match: gb|KFM66923.1| (hypothetical protein X975_05448, partial [Stegodyphus mimosarum]) HSP 1 Score: 48.9062 bits (115), Expect = 2.361e-7 Identity = 27/68 (39.71%), Postives = 39/68 (57.35%), Query Frame = 0 Query: 1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTLKNMDFNKV 68 + LFT +H+E++ S ST FIQ R+ I G+P I+Y DN NFV ++ LK +D+ KV Sbjct: 109 VVLFTFAVYRCVHLELVTSVSTECFIQAFRRFIARRGRPSIVYSDNGTNFVGTS---ALLKKVDWVKV 173
BLAST of EMLSAG00000001153 vs. nr
Match: gi|954236610|gb|KRX33554.1| (hypothetical protein T05_11876 [Trichinella murrelli]) HSP 1 Score: 80.4925 bits (197), Expect = 1.487e-15 Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = 0 Query: 1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTL-KNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97 + LFTC+ + A+H+E++ +T +Q LR+ I G+PEII DN R+F + +L+ L +++D ++VQ E G I WKF T APW + ER+ Sbjct: 1083 VCLFTCMASRAVHLELVPQMTTARVMQALRRFIARRGRPEIIQSDNFRSFKAAASELRQLWRHVDVDRVQRE-LVGHRIHWKFITERAPWMGGYWERL 1179
BLAST of EMLSAG00000001153 vs. nr
Match: gi|954236525|gb|KRX33504.1| (hypothetical protein T05_2772, partial [Trichinella murrelli]) HSP 1 Score: 80.4925 bits (197), Expect = 1.487e-15 Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = 0 Query: 1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTL-KNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97 + LFTC+ + A+H+E++ +T +Q LR+ I G+PEII DN R+F + +L+ L +++D ++VQ E G I WKF T APW + ER+ Sbjct: 1123 VCLFTCMASRAVHLELVPQMTTARVMQALRRFIARRGRPEIIQSDNFRSFKAAASELRQLWRHVDVDRVQRE-LVGHRIHWKFITERAPWMGGYWERL 1219
BLAST of EMLSAG00000001153 vs. nr
Match: gi|954236760|gb|KRX33638.1| (hypothetical protein T05_2605 [Trichinella murrelli]) HSP 1 Score: 80.4925 bits (197), Expect = 1.488e-15 Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = 0 Query: 1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTL-KNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97 + LFTC+ + A+H+E++ +T +Q LR+ I G+PEII DN R+F + +L+ L +++D ++VQ E G I WKF T APW + ER+ Sbjct: 1083 VCLFTCMASRAVHLELVPQMTTARVMQALRRFIARRGRPEIIQSDNFRSFKAAASELRQLWRHVDVDRVQRE-LVGHRIHWKFITERAPWMGGYWERL 1179
BLAST of EMLSAG00000001153 vs. nr
Match: gi|954236649|gb|KRX33575.1| (hypothetical protein T05_11326 [Trichinella murrelli]) HSP 1 Score: 80.4925 bits (197), Expect = 1.488e-15 Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = 0 Query: 1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTL-KNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97 + LFTC+ + A+H+E++ +T +Q LR+ I G+PEII DN R+F + +L+ L +++D ++VQ E G I WKF T APW + ER+ Sbjct: 1083 VCLFTCMASRAVHLELVPQMTTARVMQALRRFIARRGRPEIIQSDNFRSFKAAASELRQLWRHVDVDRVQRE-LVGHRIHWKFITERAPWMGGYWERL 1179
BLAST of EMLSAG00000001153 vs. nr
Match: gi|954531844|gb|KRZ56339.1| (hypothetical protein T02_1496 [Trichinella nativa]) HSP 1 Score: 80.4925 bits (197), Expect = 1.496e-15 Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = 0 Query: 1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTL-KNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97 + LFTC+ + A+H+E++ +T +Q LR+ I G+PEII DN R+F + +L+ L +++D ++VQ E G I WKF T APW + ER+ Sbjct: 1389 VCLFTCMASRAVHLELVPQMTTARVMQALRRFIARRGRPEIIQSDNFRSFKAAASELRQLWRHVDVDRVQRE-LVGHRIHWKFITERAPWMGGYWERL 1485
BLAST of EMLSAG00000001153 vs. nr
Match: gi|954372357|gb|KRY38464.1| (hypothetical protein T01_5563 [Trichinella spiralis]) HSP 1 Score: 80.4925 bits (197), Expect = 1.498e-15 Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = 0 Query: 1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTL-KNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97 + LFTC+ + A+H+E++ +T +Q LR+ I G+PEII DN R+F + +L+ L +++D ++VQ E G I WKF T APW + ER+ Sbjct: 1464 VCLFTCMASRAVHLELVPQMTTARVMQALRRFIARRGRPEIIQSDNFRSFKAAASELRQLWRHVDVDRVQRE-LVGHRIHWKFITERAPWMGGYWERL 1560
BLAST of EMLSAG00000001153 vs. nr
Match: gi|339234082|ref|XP_003382158.1| (putative integrase core domain protein [Trichinella spiralis] >gi|316978887|gb|EFV61788.1| putative integrase core domain protein [Trichinella spiralis]) HSP 1 Score: 80.4925 bits (197), Expect = 1.511e-15 Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = 0 Query: 1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTL-KNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97 + LFTC+ + A+H+E++ + +Q LR+ I L G+PEII DN R+F + +L+ L +++D ++VQ E G I WKF T APW + ER+ Sbjct: 1374 VCLFTCMASRAVHLELVPQMTKARVMQALRRFIALRGRPEIIQSDNFRSFKAAASELRQLWRHVDVDRVQRE-LVGHRIHWKFITERAPWMGGYWERL 1470
BLAST of EMLSAG00000001153 vs. nr
Match: gi|954394261|gb|KRY56560.1| (Retrovirus-related Pol polyprotein from transposon 17.6 [Trichinella britovi]) HSP 1 Score: 80.1073 bits (196), Expect = 1.577e-15 Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = 0 Query: 1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTL-KNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97 + LFTC+ + A+H+E++ +T +Q LR+ I G+PEII DN R+F + +L+ L +++D ++VQ E G I WKF T APW + ER+ Sbjct: 144 VCLFTCMASRAVHLELVPQMTTARVMQALRRFIARRGRPEIIQSDNFRSFKAAASELKQLWRHVDVDRVQRE-LVGHRIHWKFITERAPWMGGYWERL 240
BLAST of EMLSAG00000001153 vs. nr
Match: gi|954531829|gb|KRZ56324.1| (hypothetical protein T02_10589 [Trichinella nativa]) HSP 1 Score: 80.1073 bits (196), Expect = 1.632e-15 Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = 0 Query: 1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTL-KNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97 + LFTC+ + A+H+E++ +T +Q LR+ I G+PEII DN R+F + +L+ L +++D ++VQ E G I WKF T APW + ER+ Sbjct: 987 VCLFTCMASRAVHLELVPEMTTARVMQALRRFIARRGRPEIIQSDNFRSFKAAASELRQLWRHVDVDRVQRE-LVGHRIHWKFITERAPWMGGYWERL 1083
BLAST of EMLSAG00000001153 vs. nr
Match: gi|954258653|gb|KRX52286.1| (hypothetical protein T09_4951 [Trichinella sp. T9]) HSP 1 Score: 80.1073 bits (196), Expect = 1.667e-15 Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = 0 Query: 1 MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNFVTSNKQLQTL-KNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERM 97 + LFTC+ + A+H+E++ +T +Q LR+ I G+PEII DN R+F + +L+ L +++D ++VQ E G I WKF T APW + ER+ Sbjct: 1464 VCLFTCMASRAVHLELVPQMTTARVMQALRRFIARRGRPEIIQSDNFRSFKAAASELKQLWRHVDVDRVQRE-LVGHRIHWKFITERAPWMGGYWERL 1560 The following BLAST results are available for this feature:
BLAST of EMLSAG00000001153 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000001153 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 19
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BLAST of EMLSAG00000001153 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000001153 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000001153 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 20
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BLAST of EMLSAG00000001153 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000001153 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1190:92088..92396- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000001153-683919 ID=EMLSAG00000001153-683919|Name=EMLSAG00000001153|organism=Lepeophtheirus salmonis|type=gene|length=309bp|location=Sequence derived from alignment at LSalAtl2s1190:92088..92396- (Lepeophtheirus salmonis)back to top Add to Basket
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