EMLSAG00000001345, EMLSAG00000001345-684111 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000001345
Unique NameEMLSAG00000001345-684111
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000001345 vs. GO
Match: - (symbol:STAU1 "Double-stranded RNA-binding protein Staufen homolog 1" species:9606 "Homo sapiens" [GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005791 "rough endoplasmic reticulum" evidence=IEA] [GO:0005875 "microtubule associated complex" evidence=TAS] [GO:0008157 "protein phosphatase 1 binding" evidence=IEA] [GO:0008298 "intracellular mRNA localization" evidence=IEA] [GO:0010494 "cytoplasmic stress granule" evidence=ISS] [GO:0043005 "neuron projection" evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA] [GO:0044822 "poly(A) RNA binding" evidence=IDA] [GO:0070062 "extracellular vesicular exosome" evidence=IDA] InterPro:IPR014720 Pfam:PF00035 GO:GO:0070062 EMBL:CH471077 GO:GO:0005875 GO:GO:0003725 GO:GO:0043025 GO:GO:0043005 GO:GO:0005791 Gene3D:3.30.160.20 SMART:SM00358 PROSITE:PS50137 GO:GO:0008298 GO:GO:0010494 EMBL:AF061939 EMBL:AF061941 EMBL:AF061938 EMBL:AF061940 EMBL:AJ132258 EMBL:AY529074 EMBL:AY546099 EMBL:AL136601 EMBL:AK292859 EMBL:AL133174 EMBL:BC050432 EMBL:BC095397 RefSeq:NP_001032405.1 RefSeq:NP_004593.2 RefSeq:NP_059346.2 RefSeq:NP_059347.2 RefSeq:NP_059348.2 RefSeq:XP_005260583.1 RefSeq:XP_005260584.1 RefSeq:XP_005260585.1 RefSeq:XP_005260586.1 UniGene:Hs.596704 PDB:4DKK PDBsum:4DKK ProteinModelPortal:O95793 SMR:O95793 BioGrid:112657 IntAct:O95793 MINT:MINT-1160018 STRING:9606.ENSP00000360922 PhosphoSite:O95793 PaxDb:O95793 PRIDE:O95793 DNASU:6780 Ensembl:ENST00000340954 Ensembl:ENST00000347458 Ensembl:ENST00000360426 Ensembl:ENST00000371802 Ensembl:ENST00000371828 Ensembl:ENST00000371856 GeneID:6780 KEGG:hsa:6780 UCSC:uc002xua.3 UCSC:uc002xub.3 CTD:6780 GeneCards:GC20M047729 HGNC:HGNC:11370 HPA:CAB020839 MIM:601716 neXtProt:NX_O95793 PharmGKB:PA36188 eggNOG:NOG299502 HOGENOM:HOG000231025 HOVERGEN:HBG005013 InParanoid:O95793 KO:K17597 OMA:QGIQVEY OrthoDB:EOG7NGQCG PhylomeDB:O95793 TreeFam:TF350296 ChiTaRS:STAU1 GeneWiki:STAU1 GenomeRNAi:6780 NextBio:26468 PRO:PR:O95793 ArrayExpress:O95793 Bgee:O95793 CleanEx:HS_STAU1 Genevestigator:O95793 Uniprot:O95793)

HSP 1 Score: 44.2838 bits (103), Expect = 5.475e-4
Identity = 29/93 (31.18%), Postives = 41/93 (44.09%), Query Frame = 0 
Query:  132 RNWSMEWEQVSEEGPPHMKVFTWCLKIGDISVVASANSKKGAKNKAAEDMARKLDKL----------PKAKKRAHPFQMMGYPPPMMYGMNPM 214
            RN  + +E   E GPPHMK F   + +G+        SKK +K  AA  +  +L KL          P+ KK+  P       P    G+NP+
Sbjct:  196 RNLPVNFEVARESGPPHMKNFVTKVSVGEFVGEGEGKSKKISKKNAAIAVLEELKKLPPLPAVERVKPRIKKKTKPIVKPQTSPEYGQGINPI 288
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BLAST of EMLSAG00000001345 vs. GO
Match: - (symbol:prkra "protein kinase, interferon-inducible double stranded RNA dependent activator" species:7955 "Danio rerio" [GO:0030422 "production of siRNA involved in RNA interference" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0016740 "transferase activity" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR007110 PROSITE:PS50835 InterPro:IPR014720 Pfam:PF00035 ZFIN:ZDB-GENE-050309-206 Gene3D:3.30.160.20 SMART:SM00358 PROSITE:PS50137 CTD:8575 GeneTree:ENSGT00730000110945 OMA:PVTVCHG EMBL:FP102120 RefSeq:XP_005172565.1 UniGene:Dr.86625 PRIDE:F1Q8C8 Ensembl:ENSDART00000140917 GeneID:557370 KEGG:dre:557370 OrthoDB:EOG7P2XT0 Bgee:F1Q8C8 Uniprot:F1Q8C8)

HSP 1 Score: 43.5134 bits (101), Expect = 5.934e-4
Identity = 26/73 (35.62%), Postives = 36/73 (49.32%), Query Frame = 0 
Query:  117 EGRNAIVFCNEQSKLRNWSM-EWEQVSEEGPPHMKVFTWCLKIGDISVVASANSKKGAKNKAAEDMARKLDKL 188
            E  N +    E +  R W + E+    E GP HMK FT   ++  +    S +SKK A+  AAE+M  KL  L
Sbjct:  103 EASNPVGILQELAMQRVWCLPEYVVFMETGPGHMKEFTIACRLEGLEETGSGSSKKLARRAAAENMIAKLQSL 175
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BLAST of EMLSAG00000001345 vs. GO
Match: - (symbol:STAU1 "Uncharacterized protein" species:9913 "Bos taurus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008298 "intracellular mRNA localization" evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA] InterPro:IPR014720 Pfam:PF00035 GO:GO:0005737 Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0030529 SMART:SM00358 PROSITE:PS50137 GO:GO:0008298 OMA:QGIQVEY OrthoDB:EOG7NGQCG TreeFam:TF350296 GeneTree:ENSGT00730000110890 EMBL:DAAA02036827 Ensembl:ENSBTAT00000000301 Uniprot:F1MH34)

HSP 1 Score: 43.8986 bits (102), Expect = 7.125e-4
Identity = 29/93 (31.18%), Postives = 41/93 (44.09%), Query Frame = 0 
Query:  132 RNWSMEWEQVSEEGPPHMKVFTWCLKIGDISVVASANSKKGAKNKAAEDMARKLDKL----------PKAKKRAHPFQMMGYPPPMMYGMNPM 214
            RN  + +E   E GPPHMK F   + +G+        SKK +K  AA  +  +L KL          P+ KK+      +   P    GMNP+
Sbjct:  294 RNLPVNFEVARESGPPHMKSFVTRVSVGEFVGEGEGKSKKISKKNAAIAVLEELKKLPPLPTVERVKPRIKKKTKSIVRLQGGPECGQGMNPI 386
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BLAST of EMLSAG00000001345 vs. C. finmarchicus
Match: gi|592835346|gb|GAXK01122198.1| (TSA: Calanus finmarchicus comp106897_c0_seq4 transcribed RNA sequence)

HSP 1 Score: 88.5817 bits (218), Expect = 3.077e-19
Identity = 52/91 (57.14%), Postives = 65/91 (71.43%), Query Frame = 0 
Query:  109 EKPIQEILEGRNAIVFCNEQSKLRNWSMEWEQVSEEGPPHMKVFTWCLKIGDISVVXXXXXXXXXXXXXXEDMARKLDKLPKAKKRAHPFQ 199
            EK I  IL+GRN ++FCN+QSKLRN  MEWEQVSE GPPH K + + LK+G+++      +KK AK KAAE M  KLD+LP+  KR  PFQ
Sbjct:  382 EKSILAILKGRNPVMFCNDQSKLRNLHMEWEQVSEIGPPHDKTYEYQLKMGELAAQGVGKNKKDAKTKAAEVMVLKLDELPRINKR--PFQ 648
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BLAST of EMLSAG00000001345 vs. C. finmarchicus
Match: gi|592835347|gb|GAXK01122197.1| (TSA: Calanus finmarchicus comp106897_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 88.5817 bits (218), Expect = 3.145e-19
Identity = 52/91 (57.14%), Postives = 65/91 (71.43%), Query Frame = 0 
Query:  109 EKPIQEILEGRNAIVFCNEQSKLRNWSMEWEQVSEEGPPHMKVFTWCLKIGDISVVXXXXXXXXXXXXXXEDMARKLDKLPKAKKRAHPFQ 199
            EK I  IL+GRN ++FCN+QSKLRN  MEWEQVSE GPPH K + + LK+G+++      +KK AK KAAE M  KLD+LP+  KR  PFQ
Sbjct:  382 EKSILAILKGRNPVMFCNDQSKLRNLHMEWEQVSEIGPPHDKTYEYQLKMGELAAQGVGKNKKDAKTKAAEVMVLKLDELPRINKR--PFQ 648
[Close]
BLAST of EMLSAG00000001345 vs. C. finmarchicus
Match: gi|592835348|gb|GAXK01122196.1| (TSA: Calanus finmarchicus comp106897_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 88.5817 bits (218), Expect = 3.802e-19
Identity = 52/91 (57.14%), Postives = 65/91 (71.43%), Query Frame = 0 
Query:  109 EKPIQEILEGRNAIVFCNEQSKLRNWSMEWEQVSEEGPPHMKVFTWCLKIGDISVVXXXXXXXXXXXXXXEDMARKLDKLPKAKKRAHPFQ 199
            EK I  IL+GRN ++FCN+QSKLRN  MEWEQVSE GPPH K + + LK+G+++      +KK AK KAAE M  KLD+LP+  KR  PFQ
Sbjct:  382 EKSILAILKGRNPVMFCNDQSKLRNLHMEWEQVSEIGPPHDKTYEYQLKMGELAAQGVGKNKKDAKTKAAEVMVLKLDELPRINKR--PFQ 648
[Close]
BLAST of EMLSAG00000001345 vs. C. finmarchicus
Match: gi|592835349|gb|GAXK01122195.1| (TSA: Calanus finmarchicus comp106897_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 88.5817 bits (218), Expect = 3.862e-19
Identity = 52/91 (57.14%), Postives = 65/91 (71.43%), Query Frame = 0 
Query:  109 EKPIQEILEGRNAIVFCNEQSKLRNWSMEWEQVSEEGPPHMKVFTWCLKIGDISVVXXXXXXXXXXXXXXEDMARKLDKLPKAKKRAHPFQ 199
            EK I  IL+GRN ++FCN+QSKLRN  MEWEQVSE GPPH K + + LK+G+++      +KK AK KAAE M  KLD+LP+  KR  PFQ
Sbjct:  382 EKSILAILKGRNPVMFCNDQSKLRNLHMEWEQVSEIGPPHDKTYEYQLKMGELAAQGVGKNKKDAKTKAAEVMVLKLDELPRINKR--PFQ 648
[Close]
BLAST of EMLSAG00000001345 vs. C. finmarchicus
Match: gi|592821347|gb|GAXK01133221.1| (TSA: Calanus finmarchicus comp27417_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 56.9954 bits (136), Expect = 9.753e-9
Identity = 54/209 (25.84%), Postives = 79/209 (37.80%), Query Frame = 0 
Query:   22 NFPSWNYGCTLENNTQTGAFETFYNGVRESKRHEXXXXXXXXXXXXXXXXXXXXXQKSGSTPSQNEDSQKKVLEEAPNEQQ----------------------------QEDASPE-----KPIQEILEGRNAIVFCNEQSKLRNWSMEWEQVSEEGPPHMKVFTWCLKIG-----DISVVXXXXXXXXXXXXX-XEDMARKLDKLPKA 191
            NFP+WNYG TL    Q G +  +        R      +     +       +        PSQ E   ++V  +   E++                              D  PE     K +  IL GRNA +F N + K R W +E+E+V  EGP H + +++ L +G     +++V A     K    K   E M  KLD LP A
Sbjct: 2017 NFPNWNYGTTLGGQGQHGGYTEY--------RDPGSYGNHGYGFTGPRGGGFSGRGGRCPLPSQEEIMPQEVAGQVAKEEEVMEKMPGVIIKNDDGSLVKVVDPNTPLPMPDVRPEPTRFDKSVHGILNGRNAAMFVNIECKKRGWDIEFEEVDAEGPVHDRTYSYTLTVGPPDSEEVTVTAGIAKSKKDAKKRCCEAMVLKLDDLPPA 2619
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BLAST of EMLSAG00000001345 vs. C. finmarchicus
Match: gi|592822388|gb|GAXK01132180.1| (TSA: Calanus finmarchicus comp26681_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 42.743 bits (99), Expect = 4.430e-4
Identity = 31/85 (36.47%), Postives = 44/85 (51.76%), Query Frame = 0 
Query:  116 LEGRNAIVFCNEQSKLRNWSMEWEQVSEEGPPHMKVFTWCLKIGDISVVXXXXXXXXXXXXXXEDMARKL-----DKLPKAKKRA 195
            ++ +N  +  NE + +     EW  +SE GPPH K+FTW L +G  +   +  +KK A+N AAE M   L      K  K KKR 
Sbjct:  812 MDQKNVNMALNEIAMMNGCVPEWTLISEAGPPHQKLFTWQLSLGQYTTTGTGPNKKMARNTAAEQMMATLPEEWKQKAGKVKKRG 1066
[Close]
BLAST of EMLSAG00000001345 vs. C. finmarchicus
Match: gi|592822389|gb|GAXK01132179.1| (TSA: Calanus finmarchicus comp26681_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 42.743 bits (99), Expect = 4.578e-4
Identity = 31/85 (36.47%), Postives = 44/85 (51.76%), Query Frame = 0 
Query:  116 LEGRNAIVFCNEQSKLRNWSMEWEQVSEEGPPHMKVFTWCLKIGDISVVXXXXXXXXXXXXXXEDMARKL-----DKLPKAKKRA 195
            ++ +N  +  NE + +     EW  +SE GPPH K+FTW L +G  +   +  +KK A+N AAE M   L      K  K KKR 
Sbjct: 1006 MDQKNVNMALNEIAMMNGCVPEWTLISEAGPPHQKLFTWQLSLGQYTTTGTGPNKKMARNTAAEQMMATLPEEWKQKAGKVKKRG 1260
[Close]
BLAST of EMLSAG00000001345 vs. C. finmarchicus
Match: gi|592938622|gb|GAXK01019931.1| (TSA: Calanus finmarchicus comp13739_c10_seq1 transcribed RNA sequence)

HSP 1 Score: 37.7354 bits (86), Expect = 2.801e-2
Identity = 35/102 (34.31%), Postives = 49/102 (48.04%), Query Frame = 0 
Query:   92 KVLEEAPNEQQQEDASPEK----PIQEILEGRNAIVFCNEQSKLRNWSMEWEQVSEEGPPHMKVFTWCLKIGDISVVXXXXXXXXXXXXXXEDMARKLDKLP 189
            KVL++ P    +    P      P  E  E ++ I   +E +  RN  + +E V E GPPHM+ F     +GD       N KK +K +AAE M  KL +LP
Sbjct: 1506 KVLKDLPIPDGKSKLDPTSLPFIPGSEYDELKSPISLAHEIALKRNLQVYFEVVRETGPPHMRTFITKCIVGDFVTEGEGNGKKVSKKRAAELMLDKLKQLP 1811

HSP 2 Score: 33.4982 bits (75), Expect = 5.206e-1
Identity = 15/42 (35.71%), Postives = 21/42 (50.00%), Query Frame = 0 
Query:  119 RNAIVFCNEQSKLRNWSMEWEQVSEEGPPHMKVFTWCLKIGD 160
            +  +   NE ++      ++    E GP H K FT CLKIGD
Sbjct:  993 KTPMCLVNELARYNKVGHQYRLTDESGPAHKKTFTVCLKIGD 1118
[Close]
BLAST of EMLSAG00000001345 vs. C. finmarchicus
Match: gi|592819214|gb|GAXK01135354.1| (TSA: Calanus finmarchicus comp240376_c2_seq1 transcribed RNA sequence)

HSP 1 Score: 34.6538 bits (78), Expect = 1.335e-1
Identity = 16/41 (39.02%), Postives = 27/41 (65.85%), Query Frame = 0 
Query:  121 AIVFCNEQ-SKLRNWSMEWEQVSEEGPPHMKVFTWCLKIGD 160
            A+   NE  S+++  S+++E  SE G P+ KVFT  +K+G+
Sbjct:  140 ALQLVNEMASRMKMSSLDFELTSEVGTPNDKVFTMTVKVGE 262
[Close]
BLAST of EMLSAG00000001345 vs. C. finmarchicus
Match: gi|592819213|gb|GAXK01135355.1| (TSA: Calanus finmarchicus comp240376_c2_seq2 transcribed RNA sequence)

HSP 1 Score: 34.6538 bits (78), Expect = 1.557e-1
Identity = 16/41 (39.02%), Postives = 27/41 (65.85%), Query Frame = 0 
Query:  121 AIVFCNEQ-SKLRNWSMEWEQVSEEGPPHMKVFTWCLKIGD 160
            A+   NE  S+++  S+++E  SE G P+ KVFT  +K+G+
Sbjct:  104 ALQLVNEMASRMKMSSLDFELTSEVGTPNDKVFTMTVKVGE 226
[Close]
BLAST of EMLSAG00000001345 vs. L. salmonis peptides
Match: EMLSAP00000001345 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1228:15906:17054:-1 gene:EMLSAG00000001345 transcript:EMLSAT00000001345 description:"augustus_masked-LSalAtl2s1228-processed-gene-0.1")

HSP 1 Score: 448.743 bits (1153), Expect = 1.240e-161
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0 
Query:    1 MNNKRRDRNNYGVGGGGGGGYNFPSWNYGCTLENNTQTGAFETFYNGVRESKRHEVPIASPVPPPSLSLPSATTSSQKSGSTPSQNEDSQKKVLEEAPNEQQQEDASPEKPIQEILEGRNAIVFCNEQSKLRNWSMEWEQVSEEGPPHMKVFTWCLKIGDISVVASANSKKGAKNKAAEDMARKLDKLPKAKKRAHPFQMMGYPPPMMYGMNPMM 215
            MNNKRRDRNNYGVGGGGGGGYNFPSWNYGCTLENNTQTGAFETFYNGVRESKRHEVPIASPVPPPSLSLPSATTSSQKSGSTPSQNEDSQKKVLEEAPNEQQQEDASPEKPIQEILEGRNAIVFCNEQSKLRNWSMEWEQVSEEGPPHMKVFTWCLKIGDISVVASANSKKGAKNKAAEDMARKLDKLPKAKKRAHPFQMMGYPPPMMYGMNPMM
Sbjct:    1 MNNKRRDRNNYGVGGGGGGGYNFPSWNYGCTLENNTQTGAFETFYNGVRESKRHEVPIASPVPPPSLSLPSATTSSQKSGSTPSQNEDSQKKVLEEAPNEQQQEDASPEKPIQEILEGRNAIVFCNEQSKLRNWSMEWEQVSEEGPPHMKVFTWCLKIGDISVVASANSKKGAKNKAAEDMARKLDKLPKAKKRAHPFQMMGYPPPMMYGMNPMM 215
[Close]
BLAST of EMLSAG00000001345 vs. L. salmonis peptides
Match: EMLSAP00000002431 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1464:38656:42603:-1 gene:EMLSAG00000002431 transcript:EMLSAT00000002431 description:"maker-LSalAtl2s1464-augustus-gene-0.13")

HSP 1 Score: 67.0106 bits (162), Expect = 3.185e-13
Identity = 35/81 (43.21%), Postives = 49/81 (60.49%), Query Frame = 0 
Query:  115 ILEGRNAIVFCNEQSKLRNWSMEWEQVSEEGPPHMKVFTWCLKIGDISVVASANSKKGAKNKAAEDMARKLDKLPKAKKRA 195
            +LEG+N I+  NE +       EW  VS++G PH + FTW LK+GD  VV + +SKK AK  AA  M   L+ +P+  K+A
Sbjct:  258 LLEGKNVIMALNEIAMTNGLCPEWNMVSDQGLPHQRTFTWSLKLGDHEVVGTGSSKKVAKTTAANQM---LNIIPEEWKKA 335
[Close]
BLAST of EMLSAG00000001345 vs. SwissProt
Match: gi|73919457|sp|Q7ZW47.2|STAU2_DANRE (RecName: Full=Double-stranded RNA-binding protein Staufen homolog 2)

HSP 1 Score: 55.0694 bits (131), Expect = 8.420e-8
Identity = 33/104 (31.73%), Postives = 51/104 (49.04%), Query Frame = 0 
Query:  119 RNAIVFCNEQSKLRNWSMEWEQVSEEGPPHMKVFTWCLKIGDISVVASANSKKGAKNKAAEDMARKLDKL--------PKAKKRAHPFQMMGYPPPMMYGMNPM 214
            ++ I    E +  RN  + +E + E GPPHMK F   + +G+ S     NSKK +K +AA  + ++L KL        PK   +  P  ++   P    GMNP+
Sbjct:  206 KSEISLVYEIALKRNLPVNFEVLKESGPPHMKSFLTRVTVGEFSAEGEGNSKKLSKKRAALSILQELKKLPVLPVVEKPKVHYKKRPKTILKTGPEYGQGMNPI 309
[Close]
BLAST of EMLSAG00000001345 vs. SwissProt
Match: gi|73919460|sp|Q68SB1.1|STAU2_RAT (RecName: Full=Double-stranded RNA-binding protein Staufen homolog 2; Short=r-staufen protein)

HSP 1 Score: 53.9138 bits (128), Expect = 2.127e-7
Identity = 33/104 (31.73%), Postives = 51/104 (49.04%), Query Frame = 0 
Query:  119 RNAIVFCNEQSKLRNWSMEWEQVSEEGPPHMKVFTWCLKIGDISVVASANSKKGAKNKAAEDMARKLDKL--------PKAKKRAHPFQMMGYPPPMMYGMNPM 214
            ++ I    E +  RN  + +E + E GPPHMK F   + +G+ S     NSKK +K +AA  + ++L KL        PK   +  P  ++   P    GMNP+
Sbjct:  206 KSEISLVFEIALKRNMPVSFEVIKESGPPHMKSFVTRVSVGEFSAEGEGNSKKLSKKRAATTVLQELKKLPPLPVIEKPKLFFKKRPKTIIKAGPEYGQGMNPI 309
[Close]
BLAST of EMLSAG00000001345 vs. SwissProt
Match: gi|73919459|sp|Q8CJ67.1|STAU2_MOUSE (RecName: Full=Double-stranded RNA-binding protein Staufen homolog 2)

HSP 1 Score: 53.5286 bits (127), Expect = 2.635e-7
Identity = 33/104 (31.73%), Postives = 51/104 (49.04%), Query Frame = 0 
Query:  119 RNAIVFCNEQSKLRNWSMEWEQVSEEGPPHMKVFTWCLKIGDISVVASANSKKGAKNKAAEDMARKLDKL--------PKAKKRAHPFQMMGYPPPMMYGMNPM 214
            ++ I    E +  RN  + +E + E GPPHMK F   + +G+ S     NSKK +K +AA  + ++L KL        PK   +  P  ++   P    GMNP+
Sbjct:  206 KSEISLVFEIALKRNMPVSFEVIKESGPPHMKSFVTRVSVGEFSAEGEGNSKKLSKKRAATTVLQELKKLPPLPVVEKPKLFFKKRPKTIVKAGPDYGQGMNPI 309
[Close]
BLAST of EMLSAG00000001345 vs. SwissProt
Match: gi|73919458|sp|Q9NUL3.1|STAU2_HUMAN (RecName: Full=Double-stranded RNA-binding protein Staufen homolog 2)

HSP 1 Score: 53.5286 bits (127), Expect = 2.813e-7
Identity = 33/104 (31.73%), Postives = 51/104 (49.04%), Query Frame = 0 
Query:  119 RNAIVFCNEQSKLRNWSMEWEQVSEEGPPHMKVFTWCLKIGDISVVASANSKKGAKNKAAEDMARKLDKL--------PKAKKRAHPFQMMGYPPPMMYGMNPM 214
            ++ I    E +  RN  + +E + E GPPHMK F   + +G+ S     NSKK +K +AA  + ++L KL        PK   +  P  ++   P    GMNP+
Sbjct:  206 KSEISLVFEIALKRNMPVSFEVIKESGPPHMKSFVTRVSVGEFSAEGEGNSKKLSKKRAATTVLQELKKLPPLPVVEKPKLFFKKRPKTIVKAGPEYGQGMNPI 309
[Close]
BLAST of EMLSAG00000001345 vs. Select Arthropod Genomes
Match: gb|EFA11564.2| (staufen [Tribolium castaneum])

HSP 1 Score: 61.6178 bits (148), Expect = 2.792e-10
Identity = 30/73 (41.10%), Postives = 44/73 (60.27%), Query Frame = 0 
Query:  117 EGRNAIVFCNEQSKLRNWSMEWEQVSEEGPPHMKVFTWCLKIGDISVVASANSKKGAKNKAAEDMARKLDKLP 189
            E ++ I   +E +  RN S+ +E +SE+GPPHMKVF    ++G+       N KK +K +AAE M  +L KLP
Sbjct:  308 ELKSPISLVHEIALKRNLSVTFEVLSEKGPPHMKVFVTQCRVGNFVAEGEGNGKKISKKRAAEKMLEELAKLP 380
[Close]
BLAST of EMLSAG00000001345 vs. Select Arthropod Genomes
Match: gb|KYB29818.1| (staufen [Tribolium castaneum])

HSP 1 Score: 61.6178 bits (148), Expect = 2.894e-10
Identity = 30/73 (41.10%), Postives = 44/73 (60.27%), Query Frame = 0 
Query:  117 EGRNAIVFCNEQSKLRNWSMEWEQVSEEGPPHMKVFTWCLKIGDISVVASANSKKGAKNKAAEDMARKLDKLP 189
            E ++ I   +E +  RN S+ +E +SE+GPPHMKVF    ++G+       N KK +K +AAE M  +L KLP
Sbjct:  303 ELKSPISLVHEIALKRNLSVTFEVLSEKGPPHMKVFVTQCRVGNFVAEGEGNGKKISKKRAAEKMLEELAKLP 375
[Close]
BLAST of EMLSAG00000001345 vs. Select Arthropod Genomes
Match: EAA04622.5 (AGAP007478-PA [Anopheles gambiae str. PEST])

HSP 1 Score: 59.6918 bits (143), Expect = 1.513e-9
Identity = 31/81 (38.27%), Postives = 48/81 (59.26%), Query Frame = 0 
Query:  117 EGRNAIVFCNEQSKLRNWSMEWEQVSEEGPPHMKVFTWCLKIGDISVVASANSKKGAKNKAAEDMARKLDKLPKAKKRAHP 197
            E ++ I   +E +  R+ S+ +E +SE+GPPHM VF    K+G I        KK +K +AAE M  +L KL KA+++ +P
Sbjct:  744 ELKSPISLVHEIAVQRSLSVVFEVISEKGPPHMTVFVTQCKVGTIVTEGEGTGKKLSKKRAAEKMLEELRKLQKAEQQLNP 824
[Close]
BLAST of EMLSAG00000001345 vs. Select Arthropod Genomes
Match: gb|KFM77620.1| (Double-stranded RNA-binding protein Staufen-like protein, partial [Stegodyphus mimosarum])

HSP 1 Score: 59.3066 bits (142), Expect = 1.665e-9
Identity = 31/83 (37.35%), Postives = 45/83 (54.22%), Query Frame = 0 
Query:  107 SPEKPIQEILEGRNAIVFCNEQSKLRNWSMEWEQVSEEGPPHMKVFTWCLKIGDISVVASANSKKGAKNKAAEDMARKLDKLP 189
            SPE    E  + ++ I   +E +  R+ ++ +E   E GPPHM+ F     +GDIS     N KK +K +AAE M  +L KLP
Sbjct:  302 SPEDDGDESDDLKSPISLVHEIALKRSLAVNFEVTRESGPPHMRTFVTRCTVGDISTDGEGNGKKVSKKRAAEKMLEELKKLP 384
[Close]
BLAST of EMLSAG00000001345 vs. nr
Match: gi|1059388207|ref|XP_017769294.1| (PREDICTED: double-stranded RNA-binding protein Staufen homolog 2 isoform X2 [Nicrophorus vespilloides])

HSP 1 Score: 65.855 bits (159), Expect = 4.891e-9
Identity = 33/73 (45.21%), Postives = 46/73 (63.01%), Query Frame = 0 
Query:  117 EGRNAIVFCNEQSKLRNWSMEWEQVSEEGPPHMKVFTWCLKIGDISVVASANSKKGAKNKAAEDMARKLDKLP 189
            E ++ I   +E +  R+ ++ +E  SE GPPHMKVF    KIGD SV    N KK +K +AAE+M +KL +LP
Sbjct:  345 ELKSPISLVHEIALKRHLNVSFEVKSENGPPHMKVFVTQCKIGDCSVEGEGNGKKVSKKRAAEEMLKKLSQLP 417
[Close]
BLAST of EMLSAG00000001345 vs. nr
Match: gi|1059388205|ref|XP_017769293.1| (PREDICTED: double-stranded RNA-binding protein Staufen homolog 2 isoform X1 [Nicrophorus vespilloides])

HSP 1 Score: 65.855 bits (159), Expect = 5.063e-9
Identity = 33/73 (45.21%), Postives = 46/73 (63.01%), Query Frame = 0 
Query:  117 EGRNAIVFCNEQSKLRNWSMEWEQVSEEGPPHMKVFTWCLKIGDISVVASANSKKGAKNKAAEDMARKLDKLP 189
            E ++ I   +E +  R+ ++ +E  SE GPPHMKVF    KIGD SV    N KK +K +AAE+M +KL +LP
Sbjct:  366 ELKSPISLVHEIALKRHLNVSFEVKSENGPPHMKVFVTQCKIGDCSVEGEGNGKKVSKKRAAEEMLKKLSQLP 438
[Close]
BLAST of EMLSAG00000001345 vs. nr
Match: gi|1000209802|gb|KXJ79917.1| (hypothetical protein RP20_CCG027552 [Aedes albopictus])

HSP 1 Score: 63.1586 bits (152), Expect = 4.192e-8
Identity = 32/75 (42.67%), Postives = 44/75 (58.67%), Query Frame = 0 
Query:  117 EGRNAIVFCNEQSKLRNWSMEWEQVSEEGPPHMKVFTWCLKIGDISVVASANSKKGAKNKAAEDMARKLDKLPKA 191
            E ++ I   +E +  R  S+++E   E+GPPHMKVFT   K+G I      N KK +K +AAE M  +L KLP A
Sbjct:  556 ELKSPISLVHEMALKRKLSVQFEVHGEKGPPHMKVFTTLCKVGSIVTEGEGNGKKLSKKRAAEKMLDELKKLPPA 630
[Close]
BLAST of EMLSAG00000001345 vs. nr
Match: gi|1121119623|ref|XP_019548739.1| (PREDICTED: double-stranded RNA-binding protein Staufen homolog 2-like [Aedes albopictus])

HSP 1 Score: 63.1586 bits (152), Expect = 4.559e-8
Identity = 32/75 (42.67%), Postives = 44/75 (58.67%), Query Frame = 0 
Query:  117 EGRNAIVFCNEQSKLRNWSMEWEQVSEEGPPHMKVFTWCLKIGDISVVASANSKKGAKNKAAEDMARKLDKLPKA 191
            E ++ I   +E +  R  S+++E   E+GPPHMKVFT   K+G I      N KK +K +AAE M  +L KLP A
Sbjct:  602 ELKSPISLVHEMALKRKLSVQFEVHGEKGPPHMKVFTTLCKVGSIVTEGEGNGKKLSKKRAAEKMLDELKKLPPA 676
[Close]
BLAST of EMLSAG00000001345 vs. nr
Match: gi|1121088105|ref|XP_019525695.1| (PREDICTED: double-stranded RNA-binding protein Staufen homolog 2-like [Aedes albopictus])

HSP 1 Score: 63.1586 bits (152), Expect = 4.618e-8
Identity = 32/75 (42.67%), Postives = 44/75 (58.67%), Query Frame = 0 
Query:  117 EGRNAIVFCNEQSKLRNWSMEWEQVSEEGPPHMKVFTWCLKIGDISVVASANSKKGAKNKAAEDMARKLDKLPKA 191
            E ++ I   +E +  R  S+++E   E+GPPHMKVFT   K+G I      N KK +K +AAE M  +L KLP A
Sbjct:  557 ELKSPISLVHEMALKRKLSVQFEVHGEKGPPHMKVFTTLCKVGSIVTEGEGNGKKLSKKRAAEKMLDELKKLPPA 631
[Close]
BLAST of EMLSAG00000001345 vs. nr
Match: gi|1134476603|gb|JAV27838.1| (putative double-stranded rna-binding protein staufen log 2, partial [Culex tarsalis])

HSP 1 Score: 63.1586 bits (152), Expect = 4.668e-8
Identity = 31/73 (42.47%), Postives = 45/73 (61.64%), Query Frame = 0 
Query:  117 EGRNAIVFCNEQSKLRNWSMEWEQVSEEGPPHMKVFTWCLKIGDISVVASANSKKGAKNKAAEDMARKLDKLP 189
            E ++ I   +E +  R  ++++E  SE+GPPHMKVFT   K+G+I      N KK +K +AAE M  +L KLP
Sbjct:  503 ELKSPISLVHELALKRKMAVQFEVHSEKGPPHMKVFTTICKVGNIVTEGEGNGKKISKKRAAEKMLDELRKLP 575
[Close]
BLAST of EMLSAG00000001345 vs. nr
Match: gi|1134476635|gb|JAV27854.1| (putative double-stranded rna-binding protein staufen log 2 [Culex tarsalis])

HSP 1 Score: 63.1586 bits (152), Expect = 4.709e-8
Identity = 31/73 (42.47%), Postives = 45/73 (61.64%), Query Frame = 0 
Query:  117 EGRNAIVFCNEQSKLRNWSMEWEQVSEEGPPHMKVFTWCLKIGDISVVASANSKKGAKNKAAEDMARKLDKLP 189
            E ++ I   +E +  R  ++++E  SE+GPPHMKVFT   K+G+I      N KK +K +AAE M  +L KLP
Sbjct:  549 ELKSPISLVHELALKRKMAVQFEVHSEKGPPHMKVFTTICKVGNIVTEGEGNGKKISKKRAAEKMLDELRKLP 621
[Close]
BLAST of EMLSAG00000001345 vs. nr
Match: gi|1134476579|gb|JAV27826.1| (putative double-stranded rna-binding protein staufen log 2 [Culex tarsalis])

HSP 1 Score: 62.7734 bits (151), Expect = 4.843e-8
Identity = 31/73 (42.47%), Postives = 45/73 (61.64%), Query Frame = 0 
Query:  117 EGRNAIVFCNEQSKLRNWSMEWEQVSEEGPPHMKVFTWCLKIGDISVVASANSKKGAKNKAAEDMARKLDKLP 189
            E ++ I   +E +  R  ++++E  SE+GPPHMKVFT   K+G+I      N KK +K +AAE M  +L KLP
Sbjct:  549 ELKSPISLVHELALKRKMAVQFEVHSEKGPPHMKVFTTICKVGNIVTEGEGNGKKISKKRAAEKMLDELRKLP 621
[Close]
BLAST of EMLSAG00000001345 vs. nr
Match: gi|1134476573|gb|JAV27823.1| (putative double-stranded rna-binding protein staufen log 2 [Culex tarsalis])

HSP 1 Score: 62.7734 bits (151), Expect = 5.462e-8
Identity = 31/73 (42.47%), Postives = 45/73 (61.64%), Query Frame = 0 
Query:  117 EGRNAIVFCNEQSKLRNWSMEWEQVSEEGPPHMKVFTWCLKIGDISVVASANSKKGAKNKAAEDMARKLDKLP 189
            E ++ I   +E +  R  ++++E  SE+GPPHMKVFT   K+G+I      N KK +K +AAE M  +L KLP
Sbjct:  550 ELKSPISLVHELALKRKMAVQFEVHSEKGPPHMKVFTTICKVGNIVTEGEGNGKKISKKRAAEKMLDELRKLP 622
[Close]
BLAST of EMLSAG00000001345 vs. nr
Match: gi|1134476535|gb|JAV27804.1| (putative double-stranded rna-binding protein staufen log 2 [Culex tarsalis])

HSP 1 Score: 62.7734 bits (151), Expect = 5.888e-8
Identity = 31/73 (42.47%), Postives = 45/73 (61.64%), Query Frame = 0 
Query:  117 EGRNAIVFCNEQSKLRNWSMEWEQVSEEGPPHMKVFTWCLKIGDISVVASANSKKGAKNKAAEDMARKLDKLP 189
            E ++ I   +E +  R  ++++E  SE+GPPHMKVFT   K+G+I      N KK +K +AAE M  +L KLP
Sbjct:  549 ELKSPISLVHELALKRKMAVQFEVHSEKGPPHMKVFTTICKVGNIVTEGEGNGKKISKKRAAEKMLDELRKLP 621
[Close]
BLAST of EMLSAG00000001345 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold243_size241480-processed-gene-0.2 (protein:Tk02951 transcript:snap_masked-scaffold243_size241480-processed-gene-0.2-mRNA-1 annotation:"double-stranded rna-binding protein staufen-like protein 2")

HSP 1 Score: 54.6842 bits (130), Expect = 3.853e-9
Identity = 25/76 (32.89%), Postives = 42/76 (55.26%), Query Frame = 0 
Query:  114 EILEGRNAIVFCNEQSKLRNWSMEWEQVSEEGPPHMKVFTWCLKIGDISVVASANSKKGAKNKAAEDMARKLDKLP 189
            E+ + ++ I   +E +  RN ++ +E + E GPPHM+ F     +GD       N KK +K +AAE M  +L ++P
Sbjct:  532 ELDDLKSPISLVHESALKRNMTVVFEVIRETGPPHMRTFITKCTVGDEVTYGEGNGKKASKKRAAELMIDQLKQMP 607
[Close]
BLAST of EMLSAG00000001345 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1024_size69702-snap-gene-0.8 (protein:Tk05379 transcript:maker-scaffold1024_size69702-snap-gene-0.8-mRNA-1 annotation:"double-stranded rna-binding protein staufen-like protein 2")

HSP 1 Score: 53.5286 bits (127), Expect = 1.149e-8
Identity = 25/76 (32.89%), Postives = 42/76 (55.26%), Query Frame = 0 
Query:  114 EILEGRNAIVFCNEQSKLRNWSMEWEQVSEEGPPHMKVFTWCLKIGDISVVASANSKKGAKNKAAEDMARKLDKLP 189
            E+ + ++ I   +E +  RN ++ +E + E GPPHM+ F     +GD       N KK +K +AAE M  +L ++P
Sbjct:  532 ELDDLKSPISLVHESALKRNMTVVFEVIRETGPPHMRTFITKCTVGDEVTYGEGNGKKASKKRAAELMIDQLKQMP 607
[Close]
BLAST of EMLSAG00000001345 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold2236_size18378-snap-gene-0.8 (protein:Tk10366 transcript:maker-scaffold2236_size18378-snap-gene-0.8-mRNA-1 annotation:"double-stranded rna-binding protein staufen homolog 2 isoform x7")

HSP 1 Score: 49.2914 bits (116), Expect = 3.496e-7
Identity = 23/62 (37.10%), Postives = 34/62 (54.84%), Query Frame = 0 
Query:  124 FCNEQSKLRNWSMEWEQVSEEGPPHMKVFTWCLKIGDISVVASANSKKGAKNKAAEDMARKL 185
              N  +  RN  + WE V E GPPH K+FT    +G+   + + +SKK AK  AA ++ + L
Sbjct:  383 LLNRIAMSRNTPLVWEVVGESGPPHQKIFTLKCVLGEHQAMGTGSSKKLAKTLAASELIKTL 444
The following BLAST results are available for this feature:
BLAST of EMLSAG00000001345 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 13
Match NameE-valueIdentityDescription
-5.475e-431.18symbol:STAU1 "Double-stranded RNA-binding protein ... [more]
-5.934e-435.62symbol:prkra "protein kinase, interferon-inducible... [more]
-7.125e-431.18symbol:STAU1 "Uncharacterized protein" species:991... [more]

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BLAST of EMLSAG00000001345 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 12
Match NameE-valueIdentityDescription
gi|592835346|gb|GAXK01122198.1|3.077e-1957.14TSA: Calanus finmarchicus comp106897_c0_seq4 trans... [more]
gi|592835347|gb|GAXK01122197.1|3.145e-1957.14TSA: Calanus finmarchicus comp106897_c0_seq3 trans... [more]
gi|592835348|gb|GAXK01122196.1|3.802e-1957.14TSA: Calanus finmarchicus comp106897_c0_seq2 trans... [more]
gi|592835349|gb|GAXK01122195.1|3.862e-1957.14TSA: Calanus finmarchicus comp106897_c0_seq1 trans... [more]
gi|592821347|gb|GAXK01133221.1|9.753e-925.84TSA: Calanus finmarchicus comp27417_c0_seq1 transc... [more]
gi|592822388|gb|GAXK01132180.1|4.430e-436.47TSA: Calanus finmarchicus comp26681_c1_seq2 transc... [more]
gi|592822389|gb|GAXK01132179.1|4.578e-436.47TSA: Calanus finmarchicus comp26681_c1_seq1 transc... [more]
gi|592938622|gb|GAXK01019931.1|2.801e-234.31TSA: Calanus finmarchicus comp13739_c10_seq1 trans... [more]
gi|592819214|gb|GAXK01135354.1|1.335e-139.02TSA: Calanus finmarchicus comp240376_c2_seq1 trans... [more]
gi|592819213|gb|GAXK01135355.1|1.557e-139.02TSA: Calanus finmarchicus comp240376_c2_seq2 trans... [more]

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BLAST of EMLSAG00000001345 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAP000000013451.240e-161100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1228:1590... [more]
EMLSAP000000024313.185e-1343.21pep:novel supercontig:LSalAtl2s:LSalAtl2s1464:3865... [more]
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BLAST of EMLSAG00000001345 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
gi|73919457|sp|Q7ZW47.2|STAU2_DANRE8.420e-831.73RecName: Full=Double-stranded RNA-binding protein ... [more]
gi|73919460|sp|Q68SB1.1|STAU2_RAT2.127e-731.73RecName: Full=Double-stranded RNA-binding protein ... [more]
gi|73919459|sp|Q8CJ67.1|STAU2_MOUSE2.635e-731.73RecName: Full=Double-stranded RNA-binding protein ... [more]
gi|73919458|sp|Q9NUL3.1|STAU2_HUMAN2.813e-731.73RecName: Full=Double-stranded RNA-binding protein ... [more]
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BLAST of EMLSAG00000001345 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 4
Match NameE-valueIdentityDescription
gb|EFA11564.2|2.792e-1041.10staufen [Tribolium castaneum][more]
gb|KYB29818.1|2.894e-1041.10staufen [Tribolium castaneum][more]
EAA04622.51.513e-938.27AGAP007478-PA [Anopheles gambiae str. PEST][more]
gb|KFM77620.1|1.665e-937.35Double-stranded RNA-binding protein Staufen-like p... [more]
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BLAST of EMLSAG00000001345 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25
Match NameE-valueIdentityDescription
gi|1059388207|ref|XP_017769294.1|4.891e-945.21PREDICTED: double-stranded RNA-binding protein Sta... [more]
gi|1059388205|ref|XP_017769293.1|5.063e-945.21PREDICTED: double-stranded RNA-binding protein Sta... [more]
gi|1000209802|gb|KXJ79917.1|4.192e-842.67hypothetical protein RP20_CCG027552 [Aedes albopic... [more]
gi|1121119623|ref|XP_019548739.1|4.559e-842.67PREDICTED: double-stranded RNA-binding protein Sta... [more]
gi|1121088105|ref|XP_019525695.1|4.618e-842.67PREDICTED: double-stranded RNA-binding protein Sta... [more]
gi|1134476603|gb|JAV27838.1|4.668e-842.47putative double-stranded rna-binding protein stauf... [more]
gi|1134476635|gb|JAV27854.1|4.709e-842.47putative double-stranded rna-binding protein stauf... [more]
gi|1134476579|gb|JAV27826.1|4.843e-842.47putative double-stranded rna-binding protein stauf... [more]
gi|1134476573|gb|JAV27823.1|5.462e-842.47putative double-stranded rna-binding protein stauf... [more]
gi|1134476535|gb|JAV27804.1|5.888e-842.47putative double-stranded rna-binding protein stauf... [more]

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BLAST of EMLSAG00000001345 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 3
Match NameE-valueIdentityDescription
snap_masked-scaffold243_size241480-processed-gene-0.23.853e-932.89protein:Tk02951 transcript:snap_masked-scaffold243... [more]
maker-scaffold1024_size69702-snap-gene-0.81.149e-832.89protein:Tk05379 transcript:maker-scaffold1024_size... [more]
maker-scaffold2236_size18378-snap-gene-0.83.496e-737.10protein:Tk10366 transcript:maker-scaffold2236_size... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1228supercontigLSalAtl2s1228:15906..17054 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionaugustus_masked-LSalAtl2s1228-processed-gene-0.1
Biotypeprotein_coding
EvidenceIEA
NoteDouble-stranded RNA-binding protein Staufen homolog 2
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000001345 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000001345EMLSAT00000001345-697192Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1228:15906..17054-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000001345-684111 ID=EMLSAG00000001345-684111|Name=EMLSAG00000001345|organism=Lepeophtheirus salmonis|type=gene|length=1149bp|location=Sequence derived from alignment at LSalAtl2s1228:15906..17054- (Lepeophtheirus salmonis)
ATGAATAATAAGCGCCGTGACAGGAACAACTACGGTGTCGGCGGAGGCGG
MGGCGGTGGATACAACTTTCCGTCATGGAACTATGGTTGCACACTTGAAA
ACAACACTCAAACAGGAGCATTCGAAACATTTTATAATGGAGTAAGGGAA
TCCAAGCGGCATGAAGTTCCTATTGCATCCCCAGTCCCTCCACCTTCACT
CTCTCTACCATCAGCGACAACATCATCTCAGAAATCTGGCTCAACTCCCT
CGCAAAATGAAGATTCACAAAAAAAGGTGCTGGAAGAGGCACCTAACGAA
CAACAACAAGAAGATGCTTCTCCAGAAAAGCCCATTCAAGAGATTTTAGA
GGGTCGCAACGCCATAGTTTTTTGTAACGAACAATCAAAATTGCGAAATT
GGAGCATGGAATGGGAACAGGTCTCGGAGGAAGGTCCTCCACATATGAAG
GTGTTCACTTGGTGCTTAAAAATAGGAGATATTTCGGTGGTAGCATCTGC
TAATAGCAAGAAAGGAGCTAAGAATAAAGCCGCTGAAGACATGGCACGGA
AGTTGGACAAATTACCTAAGGCAAAGAAACGAGCGCATCCCTTTCAAATG
ATGGGGTATCCTCCTCCCATGATGTATGGAATGAATCCTATGATGTARCC
TCCACACATGGTTCGATCTCCAMGGCAAAATCATCCACGKCCTGCCAAAA
AAAAGAAACCTAACAGAAACAATAAGGAAGGAAATGCAAGCTCGTCATCT
GTGGAAAATAAACCAAAATTACCTAATCCCTCACAAGATAATCCCATATC
TCAATTGTACGAATATTGCAAAAGGATCAAAGGGCCTGAACCTGTCTTTA
CGACTATTTCTGAAAAACCTATCGAGTCTTGTGTAACGGATCGAGGTTTT
TATCGAAAAAAGGTGGAATTTACATTACAGGTTGAGGTGGCTGGAAAAAA
GTATGAAGGAACAGCTATGACAAAGAAAGACGCGAAGCATAAAGCTGCTG
GAACTGCATGGGCTTCTATTGAGAATGAGATGAAGNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTAA
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