EMLSAG00000001697, EMLSAG00000001697-684463 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000001697 vs. L. salmonis peptides
Match: EMLSAP00000001697 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1293:85547:86422:-1 gene:EMLSAG00000001697 transcript:EMLSAT00000001697 description:"snap_masked-LSalAtl2s1293-processed-gene-0.12") HSP 1 Score: 531.176 bits (1367), Expect = 0.000e+0 Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0 Query: 1 MNNTRCCCQSLNFELKEASQSEEILGLQLQITSLSNTLSLYQKENVKFVDSLVRCAKEKADLELKLLRTEKTHEFRRVRALKKAEDIHKLILAQELKKAEETYKSLLVQELKKAQTTLELPRIRVLKEIEQIHNLRRVKELKKAEEAHKSVLVEELKKSENNYELRLIQELKKAEETHKSLQAQEIKKAWRTHKLIRVEELKKAEKAHESLRALQQKRTLETYESLQAEVIKRVEESYKSLRIQMETEKMNYSKKLEAKDMEIKKLLKGIYFST 274 MNNTRCCCQSLNFELKEASQSEEILGLQLQITSLSNTLSLYQKENVKFVDSLVRCAKEKADLELKLLRTEKTHEFRRVRALKKAEDIHKLILAQELKKAEETYKSLLVQELKKAQTTLELPRIRVLKEIEQIHNLRRVKELKKAEEAHKSVLVEELKKSENNYELRLIQELKKAEETHKSLQAQEIKKAWRTHKLIRVEELKKAEKAHESLRALQQKRTLETYESLQAEVIKRVEESYKSLRIQMETEKMNYSKKLEAKDMEIKKLLKGIYFST Sbjct: 1 MNNTRCCCQSLNFELKEASQSEEILGLQLQITSLSNTLSLYQKENVKFVDSLVRCAKEKADLELKLLRTEKTHEFRRVRALKKAEDIHKLILAQELKKAEETYKSLLVQELKKAQTTLELPRIRVLKEIEQIHNLRRVKELKKAEEAHKSVLVEELKKSENNYELRLIQELKKAEETHKSLQAQEIKKAWRTHKLIRVEELKKAEKAHESLRALQQKRTLETYESLQAEVIKRVEESYKSLRIQMETEKMNYSKKLEAKDMEIKKLLKGIYFST 274
BLAST of EMLSAG00000001697 vs. L. salmonis peptides
Match: EMLSAP00000005035 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2628:842:2360:1 gene:EMLSAG00000005035 transcript:EMLSAT00000005035 description:"maker-LSalAtl2s2628-augustus-gene-0.2") HSP 1 Score: 414.846 bits (1065), Expect = 9.501e-145 Identity = 227/299 (75.92%), Postives = 248/299 (82.94%), Query Frame = 0 Query: 1 MNNTRCCCQSLNFELKEASQSEEILGLQLQITSLSNTLSLYQKENVKFVDSLVRCAKEKADLELKLLRTEKTHEFRRVRALKKAEDIHKLILAQELKKAEETYKSLLVQELKKAQTTLELPRIRVLKEIEQIHNLRRVKELK------------------------------KAEEAHKSVLVEELKKSENNYELRLIQELKKAEETHKSLQAQEIKKAWRTHKLIRVEELKKAEKAHESLRALQQKRTLETYESLQAEVIKRVEESYKSLRIQMETEKMNYSKKLEAKDMEIKKLLKG 269 MNN+RCCCQSLN E K+AS SEEIL Q QITSLSNTLSLY++ENVKFVDSLVR KEK DLE KLLRTEK HEFRRVRALKKAEDIHKL LAQELKKA+ETYKSLLVQELKKAQT LELPR+RVLKE+E+IH LRRV+ELK KAEEAHKS LV+ELKK+E+NYELRL+QELKKAEETHKSLQAQEIKKAWRTHK IRV ELKKAEKAHESLRAL+QKRTLETYESLQAE+IKR EE++KSLRIQMETEK NYSK+L+AKD+EIK+LL Sbjct: 1 MNNSRCCCQSLNCEWKKASPSEEIL--QAQITSLSNTLSLYKQENVKFVDSLVRYVKEKEDLERKLLRTEKIHEFRRVRALKKAEDIHKLHLAQELKKADETYKSLLVQELKKAQTALELPRVRVLKEMEEIHTLRRVQELKKAEEAHQSLLAQELKKAEEAHRSVLAQELEKAEEAHKSFLVQELKKAEDNYELRLVQELKKAEETHKSLQAQEIKKAWRTHKSIRVRELKKAEKAHESLRALEQKRTLETYESLQAELIKRAEETHKSLRIQMETEKRNYSKQLQAKDIEIKELLNA 297
BLAST of EMLSAG00000001697 vs. L. salmonis peptides
Match: EMLSAP00000010468 (pep:novel supercontig:LSalAtl2s:LSalAtl2s6969:1137:2933:1 gene:EMLSAG00000010468 transcript:EMLSAT00000010468 description:"maker-LSalAtl2s6969-snap-gene-0.2") HSP 1 Score: 202.216 bits (513), Expect = 3.267e-63 Identity = 133/268 (49.63%), Postives = 171/268 (63.81%), Query Frame = 0 Query: 27 LQLQITSLSNTLSLYQKENVKFVDSLVRCAKEKADLELKLLRTEKTHEFRRVRALKKAEDIHKLILAQELKKAEETYKSLLVQELKKAQTTLELPRI---------------------------------RVLKEIEQIHNLRRVKELKKAEEAHKSVLVEELKKSENNYELRLIQELKKAEETHKSLQAQEIKKA------WRTHKLIRVEE---------LKKAEKAHESLRALQQKRTLETYESLQAEVIKRVEESYKSLRIQME 246 LQ +ITSLSN+LS Q+EN+KFVD V C KE DL+ KLLRT + HEF RVRALKK +I++L LAQELK+ EE++K LLVQELKKA+ EL ++ + LK++E H LR V ELKKAEE HKS+ V+ELKK + +ELRL +ELKKAE+ HKSL+ Q+++KA +R HKL +VEE L KAE ESLRA + K+ ETY SL+AEV+KR E+++KSLRI +E Sbjct: 2 LQAEITSLSNSLSFNQQENLKFVDPQVGCVKENEDLDRKLLRTGRIHEFXRVRALKKVHEINELRLAQELKRXEESHKYLLVQELKKAEDAYELRKVHELKKAEETHQSLLYQVLKKVDEVNELHLAQELKKLKKVEDAHALRIVYELKKAEETHKSLRVQELKKVKELHELRLFKELKKAEDPHKSLRVQDVQKAHDTQELYRIHKLQKVEEVPKSFLVQQLPKAENVCESLRAQELKKAGETYASLRAEVLKRAEKTHKSLRILVE 269
BLAST of EMLSAG00000001697 vs. L. salmonis peptides
Match: EMLSAP00000007658 (pep:novel supercontig:LSalAtl2s:LSalAtl2s4452:5698:6303:-1 gene:EMLSAG00000007658 transcript:EMLSAT00000007658 description:"snap_masked-LSalAtl2s4452-processed-gene-0.1") HSP 1 Score: 165.622 bits (418), Expect = 3.806e-50 Identity = 106/186 (56.99%), Postives = 129/186 (69.35%), Query Frame = 0 Query: 27 LQLQITSLSNTLSLYQKENVKFVDSLVRCAKEKADLELKLLRTEKTHEFRRVRALKKAED----IHKLILAQELKKAEETYKSLLVQELKKAQTTLELPRIRVLKEIEQIHNLRRVKELKKAEEAHKSVLVEELKKSENNYELRLIQELKKAEETHKSLQAQEIKKAWRTHKLIRVEELKKAEKAH 208 LQ +ITSLSN+ S Q EN+KFVD V C KEK DL+ KLLRT + HEFRRVR LKK E+ I++L LAQ+LKKAEE++KSLLVQELKKA+ T E LR+V ELKKAEE HKS+L +ELKK E EL L QE+KKA+ETHK L+ Q +K+ H+L +ELKKA +AH Sbjct: 2 LQAEITSLSNSFSFNQLENLKFVDPQVGCVKEKEDLDRKLLRTGRIHEFRRVRELKKVEESXPEINELRLAQDLKKAEESHKSLLVQELKKAEETYE---------------LRKVHELKKAEETHKSLLYQELKKVEEVNELHLAQEVKKAKETHKYLRIQXLKEVQELHELRLFKELKKAVEAH 172 HSP 2 Score: 78.9518 bits (193), Expect = 5.186e-18 Identity = 54/114 (47.37%), Postives = 74/114 (64.91%), Query Frame = 0 Query: 131 QIHNLRRVKELKKAEEAHKSVLVEELKKSENNYELRLIQELKKAEETHKSLQAQEIKKAWRTHKLIRVEELKKAEKAHESLRALQQKRTLETYESLQAEVIKRVEESYKSLRIQ 244 +IH RRV+ELKK EE+ + ELRL Q+LKKAEE+HKSL QE+KKA T++L +V ELKKAE+ H+SL + K+ E E A+ +K+ +E++K LRIQ Sbjct: 46 RIHEFRRVRELKKVEESXPEI-----------NELRLAQDLKKAEESHKSLLVQELKKAEETYELRKVHELKKAEETHKSLLYQELKKVEEVNELHLAQEVKKAKETHKYLRIQ 148
BLAST of EMLSAG00000001697 vs. L. salmonis peptides
Match: EMLSAP00000006725 (pep:novel supercontig:LSalAtl2s:LSalAtl2s3765:2827:7885:1 gene:EMLSAG00000006725 transcript:EMLSAT00000006725 description:"maker-LSalAtl2s3765-snap-gene-0.3") HSP 1 Score: 147.517 bits (371), Expect = 1.610e-43 Identity = 91/163 (55.83%), Postives = 111/163 (68.10%), Query Frame = 0 Query: 27 LQLQITSLSNTLSLYQKENVKFVDSLVRCAKEKADLELKLLRTEKTHEFRRVRALKKAEDIHKLILAQELKKAEETYKSLLVQELKKAQTTLELPRIRVLKEIEQIHNLRRVKELKKAEEAHKSVLVEELKKSENNYELRLIQELKKAEETHKSLQAQEIKKA 189 LQ QITSLSN+LS Q+ENVKFVD V C KEK DL+ K LRT HEFRRVR LKK I++L LAQELKKA+ET+KSLLVQ VLK++E + LR V ELKKAE+ HKS+ V+E++K+ + EL IQ+L+K EE HKS Q + KA Sbjct: 2 LQAQITSLSNSLSFIQQENVKFVDPQVGCVKEKEDLDRKFLRTGMIHEFRRVRELKK---INELRLAQELKKAKETHKSLLVQ---------------VLKKVEDAYELRIVYELKKAEDTHKSLRVQEVQKAHDTQELYRIQKLQKVEEVHKSFLVQHLSKA 146 HSP 2 Score: 66.6254 bits (161), Expect = 8.521e-14 Identity = 48/113 (42.48%), Postives = 65/113 (57.52%), Query Frame = 0 Query: 132 IHNLRRVKELKKAEEAHKSVLVEELKKSENNYELRLIQELKKAEETHKSLQAQEIKKAWRTHKLIRVEELKKAEKAHESLRALQQKRTLETYESLQAEVIKRVEESYKSLRIQ 244 IH RRV+ELKK E LRL QELKKA+ETHKSL Q +KK ++L V ELKKAE H+SLR + ++ +T E + + +++VEE +KS +Q Sbjct: 47 IHEFRRVRELKKINE------------------LRLAQELKKAKETHKSLLVQVLKKVEDAYELRIVYELKKAEDTHKSLRVQEVQKAHDTQELYRIQKLQKVEEVHKSFLVQ 141
BLAST of EMLSAG00000001697 vs. L. salmonis peptides
Match: EMLSAP00000006001 (pep:novel supercontig:LSalAtl2s:LSalAtl2s3250:4595:5221:1 gene:EMLSAG00000006001 transcript:EMLSAT00000006001 description:"maker-LSalAtl2s3250-augustus-gene-0.0") HSP 1 Score: 89.7373 bits (221), Expect = 9.180e-23 Identity = 47/73 (64.38%), Postives = 53/73 (72.60%), Query Frame = 0 Query: 6 CCCQSLNFELKEASQSEEILGLQLQITSLSNTLSLYQKENVKFVDSLVRCAKEKADLELKLLRTEKTHEFRRV 78 CCCQSLN LK A QSEE+L Q +ITS SN+LS QKEN+KFVD V C KEK DL+ LLRT + EFRRV Sbjct: 3 CCCQSLNCGLKVAVQSEEML--QAEITSFSNSLSFNQKENLKFVDPQVGCVKEKEDLDRTLLRTGRIQEFRRV 73
BLAST of EMLSAG00000001697 vs. L. salmonis peptides
Match: EMLSAP00000005086 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2690:5411:8123:-1 gene:EMLSAG00000005086 transcript:EMLSAT00000005086 description:"snap-LSalAtl2s2690-processed-gene-0.3") HSP 1 Score: 91.6633 bits (226), Expect = 1.585e-22 Identity = 51/79 (64.56%), Postives = 59/79 (74.68%), Query Frame = 0 Query: 10 SLNFELKEASQSEEILGLQLQITSLSNTLSLYQKENVKFVDSLVRCAKEKADLELKLLRTEKTHEFRRVRALKKAEDIH 88 SLN LK A QSEEIL Q +ITSLSN+LS Q+EN+KFVD V C KEK DL+ KLLRT + HEFRRVR LKK +I+ Sbjct: 95 SLNCGLKLAVQSEEIL--QAEITSLSNSLSFNQQENLKFVDPQVGCVKEKEDLDRKLLRTGRIHEFRRVRVLKKFHEIN 171 The following BLAST results are available for this feature:
BLAST of EMLSAG00000001697 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000001697 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 0
BLAST of EMLSAG00000001697 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 7
BLAST of EMLSAG00000001697 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000001697 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000001697 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000001697 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1293:85547..86422- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000001697-684463 ID=EMLSAG00000001697-684463|Name=EMLSAG00000001697|organism=Lepeophtheirus salmonis|type=gene|length=876bp|location=Sequence derived from alignment at LSalAtl2s1293:85547..86422- (Lepeophtheirus salmonis)back to top Add to Basket
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