EMLSAG00000003179, EMLSAG00000003179-685945 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000003179
Unique NameEMLSAG00000003179-685945
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000003179 vs. GO
Match: - (symbol:CG9705 species:7227 "Drosophila melanogaster" [GO:0005575 "cellular_component" evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0048813 "dendrite morphogenesis" evidence=IMP] InterPro:IPR002059 InterPro:IPR011129 Pfam:PF00313 SMART:SM00357 Prosite:PS00352 EMBL:AE014296 GO:GO:0006355 GO:GO:0003677 GO:GO:0048813 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 eggNOG:NOG239041 OrthoDB:EOG7N63PN InterPro:IPR019844 GeneTree:ENSGT00390000000022 OMA:CHVSDIE EMBL:AY060441 RefSeq:NP_001261972.1 RefSeq:NP_648920.1 RefSeq:NP_730197.1 UniGene:Dm.7196 ProteinModelPortal:Q9VVA0 SMR:Q9VVA0 BioGrid:65174 MINT:MINT-760000 STRING:7227.FBpp0075084 PaxDb:Q9VVA0 PRIDE:Q9VVA0 EnsemblMetazoa:FBtr0075324 EnsemblMetazoa:FBtr0075325 EnsemblMetazoa:FBtr0333607 GeneID:39875 KEGG:dme:Dmel_CG9705 UCSC:CG9705-RA FlyBase:FBgn0036661 InParanoid:Q9VVA0 PhylomeDB:Q9VVA0 ChiTaRS:CG9705 GenomeRNAi:39875 NextBio:815832 Bgee:Q9VVA0 Uniprot:Q9VVA0)

HSP 1 Score: 119.398 bits (298), Expect = 2.101e-32
Identity = 56/101 (55.45%), Postives = 75/101 (74.26%), Query Frame = 0 
Query:   68 TRRTRTESTAGKIVEN-LHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEVHHKWDVP 167
            TRRTRT ST+ + +EN +  G+VK F R++G GFITPN      ++ F H+SDIEGEYVP   D+VK+++C IPP++EK QAV V+I + TPEVHHKW+ P
Sbjct:   37 TRRTRTASTSARALENPVVTGMVKSFSRTKGHGFITPNA---GGEDVFCHVSDIEGEYVPMPGDEVKYRLCAIPPKYEKHQAVHVQISHLTPEVHHKWEEP 134
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BLAST of EMLSAG00000003179 vs. GO
Match: - (symbol:CSDC2 "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] InterPro:IPR002059 InterPro:IPR011129 Pfam:PF00313 SMART:SM00357 Prosite:PS00352 GO:GO:0006355 GO:GO:0003677 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 OrthoDB:EOG7N63PN TreeFam:TF324381 InterPro:IPR019844 GeneTree:ENSGT00390000000022 OMA:CHVSDIE EMBL:AADN03001067 Ensembl:ENSGALT00000000064 Uniprot:F1NMV8)

HSP 1 Score: 102.834 bits (255), Expect = 8.165e-26
Identity = 52/105 (49.52%), Postives = 69/105 (65.71%), Query Frame = 0 
Query:   60 RDPPETYGTRRTRTES-TAGKIVENLHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEVHHK 163
            RD P    T+RTRT S TA      +++G+ K F RS+G GFITP    N  ++ F+H+SDIEGEYVP   D+V +KVCPIPP+ +KFQAV+V + N  P   H+
Sbjct:   52 RDLPSPLPTKRTRTYSATARASAGPIYKGVCKQFSRSQGHGFITPE---NGTEDIFVHVSDIEGEYVPVEGDEVTYKVCPIPPKNQKFQAVEVVLTNLAPHTKHE 153
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BLAST of EMLSAG00000003179 vs. GO
Match: - (symbol:CSDC2 "Uncharacterized protein" species:9913 "Bos taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] InterPro:IPR002059 InterPro:IPR011129 Pfam:PF00313 SMART:SM00357 Prosite:PS00352 GO:GO:0006355 GO:GO:0003677 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 HOGENOM:HOG000059524 HOVERGEN:HBG050947 OrthoDB:EOG7N63PN TreeFam:TF324381 InterPro:IPR019844 GeneTree:ENSGT00390000000022 CTD:27254 eggNOG:NOG240305 OMA:CHVSDIE EMBL:DAAA02014733 EMBL:BC123465 RefSeq:NP_001070345.1 UniGene:Bt.64706 Ensembl:ENSBTAT00000005226 GeneID:525364 KEGG:bta:525364 InParanoid:Q08E16 NextBio:20874148 Uniprot:Q08E16)

HSP 1 Score: 100.523 bits (249), Expect = 4.994e-25
Identity = 54/109 (49.54%), Postives = 69/109 (63.30%), Query Frame = 0 
Query:   59 SRDPPETYGTRRTRTES-TAGKIVENLHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEV-HHKWD 165
            SRD P    T+RTRT S TA      + +GI K F RS+G GFITP    N +++ F+H+SDIEGEYVP   D+V +KVCPIPP+ +KFQAV+V +    P   H  W 
Sbjct:   42 SRDLPSPLPTKRTRTYSATARASAGPVFKGICKQFSRSQGHGFITPE---NGSEDIFVHVSDIEGEYVPVEGDEVTYKVCPIPPKNQKFQAVEVVLTQLAPHTPHETWS 147
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BLAST of EMLSAG00000003179 vs. GO
Match: - (symbol:CSDC2 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] InterPro:IPR002059 InterPro:IPR011129 Pfam:PF00313 SMART:SM00357 Prosite:PS00352 GO:GO:0006355 GO:GO:0003677 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 OrthoDB:EOG7N63PN TreeFam:TF324381 InterPro:IPR019844 GeneTree:ENSGT00390000000022 CTD:27254 OMA:CHVSDIE EMBL:CU633382 RefSeq:NP_001230349.1 UniGene:Ssc.3207 Ensembl:ENSSSCT00000000068 GeneID:100153407 KEGG:ssc:100153407 Uniprot:F1SRD7)

HSP 1 Score: 98.2117 bits (243), Expect = 3.834e-24
Identity = 50/109 (45.87%), Postives = 68/109 (62.39%), Query Frame = 0 
Query:   59 SRDPPETYGTRRTRTESTAGKIVEN-LHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEV-HHKWD 165
            SRD P    T+RTRT S   +     + +G+ K F RS+G GFITP    N +++ F+H+SDIEGEYVP   D+V +K+CPIPP+ +KFQAV+V +    P   H  W 
Sbjct:   42 SRDLPSPLPTKRTRTYSATARASAGPVFKGVCKQFSRSQGHGFITPE---NGSEDIFVHVSDIEGEYVPVEGDEVTYKMCPIPPKNQKFQAVEVVLTQLAPHTPHETWS 147
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BLAST of EMLSAG00000003179 vs. GO
Match: - (symbol:Csdc2 "cold shock domain containing C2, RNA binding" species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150 "biological_process" evidence=ND] InterPro:IPR002059 InterPro:IPR011129 Pfam:PF00313 SMART:SM00357 Prosite:PS00352 MGI:MGI:2146027 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677 GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 HOGENOM:HOG000059524 HOVERGEN:HBG050947 OrthoDB:EOG7N63PN TreeFam:TF324381 InterPro:IPR019844 GeneTree:ENSGT00390000000022 CTD:27254 eggNOG:NOG240305 OMA:CHVSDIE EMBL:AK028916 EMBL:AK132493 EMBL:AC102103 EMBL:BC016109 RefSeq:NP_663448.2 UniGene:Mm.22524 ProteinModelPortal:Q91YQ3 SMR:Q91YQ3 BioGrid:222938 PhosphoSite:Q91YQ3 PaxDb:Q91YQ3 Ensembl:ENSMUST00000038757 GeneID:105859 KEGG:mmu:105859 UCSC:uc007wxs.2 InParanoid:Q91YQ3 NextBio:357940 PRO:PR:Q91YQ3 ArrayExpress:Q91YQ3 CleanEx:MM_CSDC2 Genevestigator:Q91YQ3 Uniprot:Q91YQ3)

HSP 1 Score: 97.4413 bits (241), Expect = 6.017e-24
Identity = 51/108 (47.22%), Postives = 68/108 (62.96%), Query Frame = 0 
Query:   60 RDPPETYGTRRTRTES-TAGKIVENLHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEV-HHKWD 165
            RD P    T+RTRT S TA      + +G+ K F RS+G GFITP    N +++ F+H+SDIEGEYVP   D+V +K+CPIPP+ +KFQAV+V +    P   H  W 
Sbjct:   44 RDLPSPLPTKRTRTYSATARASAGPVFKGVCKQFSRSQGHGFITPE---NGSEDIFVHVSDIEGEYVPVEGDEVTYKICPIPPKNQKFQAVEVVLTQLAPHTPHETWS 148
[Close]
BLAST of EMLSAG00000003179 vs. GO
Match: - (symbol:CARHSP1 "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] InterPro:IPR002059 InterPro:IPR011129 Pfam:PF00313 SMART:SM00357 Prosite:PS00352 GO:GO:0006355 GO:GO:0003677 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 CTD:23589 OMA:AMSSEPP InterPro:IPR019844 GeneTree:ENSGT00390000000022 EMBL:AADN03006863 RefSeq:XP_414938.2 ProteinModelPortal:R4GJC0 Ensembl:ENSGALT00000044331 GeneID:416640 KEGG:gga:416640 Uniprot:R4GJC0)

HSP 1 Score: 97.4413 bits (241), Expect = 7.617e-24
Identity = 49/100 (49.00%), Postives = 65/100 (65.00%), Query Frame = 0 
Query:   68 TRRTRTESTAGKIVEN-LHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEVHHK-WD 165
            TRRTRT S   +  E  +++G+ K FCRS+G GFI+P    +   + F+HISDIEGEYVP   D+V +KVC IPP+ EK QAV+V I +  P   H+ W 
Sbjct:   50 TRRTRTYSATVRASEGPIYKGVCKCFCRSKGHGFISPA---DGGPDIFVHISDIEGEYVPVSGDEVTYKVCTIPPKNEKLQAVEVVITHLAPGTKHETWS 146
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BLAST of EMLSAG00000003179 vs. GO
Match: - (symbol:Csdc2 "Cold shock domain-containing protein C2" species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA] InterPro:IPR002059 InterPro:IPR011129 Pfam:PF00313 SMART:SM00357 Prosite:PS00352 RGD:628780 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677 GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 HOGENOM:HOG000059524 HOVERGEN:HBG050947 OrthoDB:EOG7N63PN TreeFam:TF324381 InterPro:IPR019844 GeneTree:ENSGT00390000000022 CTD:27254 eggNOG:NOG240305 OMA:CHVSDIE EMBL:X89962 PIR:JC4588 RefSeq:NP_001164013.1 UniGene:Rn.1171 ProteinModelPortal:Q63430 Ensembl:ENSRNOT00000007091 GeneID:266600 KEGG:rno:266600 UCSC:RGD:628780 InParanoid:Q63430 NextBio:624402 PRO:PR:Q63430 Genevestigator:Q63430 Uniprot:Q63430)

HSP 1 Score: 97.0561 bits (240), Expect = 8.667e-24
Identity = 51/108 (47.22%), Postives = 68/108 (62.96%), Query Frame = 0 
Query:   60 RDPPETYGTRRTRTES-TAGKIVENLHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEV-HHKWD 165
            RD P    T+RTRT S TA      + +G+ K F RS+G GFITP    N +++ F+H+SDIEGEYVP   D+V +K+CPIPP+ +KFQAV+V +    P   H  W 
Sbjct:   44 RDLPSPLPTKRTRTYSATARASAGPVFKGVCKQFSRSQGHGFITPE---NGSEDIFVHVSDIEGEYVPVEGDEVTYKMCPIPPKNQKFQAVEVVLTQLAPHTPHETWS 148
[Close]
BLAST of EMLSAG00000003179 vs. GO
Match: - (symbol:Csdc2 "cold shock domain containing C2, RNA binding" species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA] InterPro:IPR002059 InterPro:IPR011129 Pfam:PF00313 SMART:SM00357 Prosite:PS00352 RGD:628780 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677 GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 HOGENOM:HOG000059524 HOVERGEN:HBG050947 OrthoDB:EOG7N63PN TreeFam:TF324381 InterPro:IPR019844 GeneTree:ENSGT00390000000022 CTD:27254 eggNOG:NOG240305 OMA:CHVSDIE EMBL:X89962 PIR:JC4588 RefSeq:NP_001164013.1 UniGene:Rn.1171 ProteinModelPortal:Q63430 Ensembl:ENSRNOT00000007091 GeneID:266600 KEGG:rno:266600 UCSC:RGD:628780 InParanoid:Q63430 NextBio:624402 PRO:PR:Q63430 Genevestigator:Q63430 Uniprot:Q63430)

HSP 1 Score: 97.0561 bits (240), Expect = 8.667e-24
Identity = 51/108 (47.22%), Postives = 68/108 (62.96%), Query Frame = 0 
Query:   60 RDPPETYGTRRTRTES-TAGKIVENLHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEV-HHKWD 165
            RD P    T+RTRT S TA      + +G+ K F RS+G GFITP    N +++ F+H+SDIEGEYVP   D+V +K+CPIPP+ +KFQAV+V +    P   H  W 
Sbjct:   44 RDLPSPLPTKRTRTYSATARASAGPVFKGVCKQFSRSQGHGFITPE---NGSEDIFVHVSDIEGEYVPVEGDEVTYKMCPIPPKNQKFQAVEVVLTQLAPHTPHETWS 148
[Close]
BLAST of EMLSAG00000003179 vs. GO
Match: - (symbol:CSDC2 "Cold shock domain-containing protein C2" species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=NAS] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA] InterPro:IPR002059 InterPro:IPR011129 Pfam:PF00313 SMART:SM00357 Prosite:PS00352 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677 GO:GO:0006397 GO:GO:0003723 EMBL:AL023553 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 HOGENOM:HOG000059524 HOVERGEN:HBG050947 OrthoDB:EOG7N63PN TreeFam:TF324381 InterPro:IPR019844 EMBL:AB027011 EMBL:CR456457 EMBL:AL834417 EMBL:BC067113 RefSeq:NP_055275.1 UniGene:Hs.310893 ProteinModelPortal:Q9Y534 SMR:Q9Y534 IntAct:Q9Y534 STRING:9606.ENSP00000302485 PhosphoSite:Q9Y534 DMDM:32129852 PaxDb:Q9Y534 PRIDE:Q9Y534 DNASU:27254 Ensembl:ENST00000306149 GeneID:27254 KEGG:hsa:27254 UCSC:uc003bak.1 CTD:27254 GeneCards:GC22P041956 HGNC:HGNC:30359 HPA:HPA003073 neXtProt:NX_Q9Y534 PharmGKB:PA142672071 eggNOG:NOG240305 InParanoid:Q9Y534 OMA:CHVSDIE PhylomeDB:Q9Y534 GeneWiki:CSDC2 GenomeRNAi:27254 NextBio:50194 PRO:PR:Q9Y534 ArrayExpress:Q9Y534 Bgee:Q9Y534 CleanEx:HS_CSDC2 Genevestigator:Q9Y534 Uniprot:Q9Y534)

HSP 1 Score: 97.0561 bits (240), Expect = 9.113e-24
Identity = 51/108 (47.22%), Postives = 68/108 (62.96%), Query Frame = 0 
Query:   60 RDPPETYGTRRTRTES-TAGKIVENLHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEV-HHKWD 165
            RD P    T+RTRT S TA      + +G+ K F RS+G GFITP    N +++ F+H+SDIEGEYVP   D+V +K+CPIPP+ +KFQAV+V +    P   H  W 
Sbjct:   43 RDLPSPLPTKRTRTYSATARASAGPVFKGVCKQFSRSQGHGFITPE---NGSEDIFVHVSDIEGEYVPVEGDEVTYKMCPIPPKNQKFQAVEVVLTQLAPHTPHETWS 147
[Close]
BLAST of EMLSAG00000003179 vs. GO
Match: - (symbol:CARHSP1 "Uncharacterized protein" species:9913 "Bos taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] InterPro:IPR002059 InterPro:IPR011129 Pfam:PF00313 SMART:SM00357 Prosite:PS00352 GO:GO:0006355 GO:GO:0003677 GO:GO:0003730 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 CTD:23589 eggNOG:NOG239041 HOGENOM:HOG000059524 HOVERGEN:HBG050947 OMA:AMSSEPP OrthoDB:EOG7N63PN TreeFam:TF324381 InterPro:IPR019844 GeneTree:ENSGT00390000000022 EMBL:GJ062847 EMBL:DAAA02057413 EMBL:BC111637 RefSeq:NP_001039416.1 RefSeq:XP_005224457.1 RefSeq:XP_005224458.1 RefSeq:XP_005224459.1 RefSeq:XP_005224460.1 UniGene:Bt.88637 STRING:9913.ENSBTAP00000001890 Ensembl:ENSBTAT00000001890 GeneID:506760 KEGG:bta:506760 InParanoid:Q2NKU4 NextBio:20867742 Uniprot:Q2NKU4)

HSP 1 Score: 96.2857 bits (238), Expect = 1.736e-23
Identity = 47/99 (47.47%), Postives = 65/99 (65.66%), Query Frame = 0 
Query:   68 TRRTRTESTAGKIVEN-LHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEVHHK-W 164
            TRRTRT S   +  +  +++G+ K FCRS+G GFITP    +   + F+HISD+EGEYVP   D+V +K+C IPP+ EK QAV+V I +  P   H+ W
Sbjct:   45 TRRTRTFSATVRASQGPVYKGVCKCFCRSKGHGFITP---ADGGPDIFLHISDVEGEYVPMEGDEVTYKMCSIPPKNEKLQAVEVVITHLAPGTKHETW 140
[Close]
BLAST of EMLSAG00000003179 vs. C. finmarchicus
Match: gi|592884225|gb|GAXK01074150.1| (TSA: Calanus finmarchicus comp123745_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 106.301 bits (264), Expect = 2.070e-26
Identity = 56/120 (46.67%), Postives = 79/120 (65.83%), Query Frame = 0 
Query:   69 RRTRTESTAGKIVENLHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEVHHKWDVPXXXXXXXXXXDAVNAAQHYDV 188
            RR RT+S + +I   +  G V YFC+SRG G+I P++  N  +E F+H+SD+E + VP + DQV +++CPIPP+FEK QAV V I   + + H +WD PETPE++  EED  N     DV
Sbjct:  531 RRIRTDSVSERIKGEIQCGTVTYFCKSRGHGYIQPSQ--NSGEEHFVHVSDVESDVVPLKGDQVSYRLCPIPPKFEKCQAVNVTITKMSAQSHKRWDTPETPEDIPTEEDLSNHPPPADV 884
[Close]
BLAST of EMLSAG00000003179 vs. C. finmarchicus
Match: gi|592777199|gb|GAXK01177369.1| (TSA: Calanus finmarchicus comp3960794_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 33.4982 bits (75), Expect = 2.043e-1
Identity = 17/55 (30.91%), Postives = 32/55 (58.18%), Query Frame = 0 
Query:   85 HEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIE--GEYVPRRDDQVKFKVC 137
            H G VK+F  ++GFGF+  +    ++++ F+H S I+  G    R  ++V+F + 
Sbjct:  135 HTGTVKWFNITKGFGFVELDD--GEDQDVFVHQSAIQTTGFRFLREGERVEFDLV 293
[Close]
BLAST of EMLSAG00000003179 vs. C. finmarchicus
Match: gi|592798421|gb|GAXK01156147.1| (TSA: Calanus finmarchicus comp284306_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 29.261 bits (64), Expect = 6.657e+0
Identity = 20/60 (33.33%), Postives = 28/60 (46.67%), Query Frame = 0 
Query:   71 TRTESTAGKIVENLHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDD 130
            T TE    K+++N+ +GI  Y C         PNKPI  + +F +  S     Y PR  D
Sbjct:  183 TNTEDQIYKLLQNVKKGI--YIC--------FPNKPIFFSDQFGILTSKYSKVYFPRHGD 332
[Close]
BLAST of EMLSAG00000003179 vs. L. salmonis peptides
Match: EMLSAP00000003179 (pep:novel supercontig:LSalAtl2s:LSalAtl2s176:378973:380312:1 gene:EMLSAG00000003179 transcript:EMLSAT00000003179 description:"maker-LSalAtl2s176-augustus-gene-3.18")

HSP 1 Score: 383.645 bits (984), Expect = 7.115e-137
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0 
Query:    1 MESVVSSTTKDMKLNPSTPSPERPSNLXKIPLIRRTRCDSCSENVLSSTXTTPGIIAESRDPPETYGTRRTRTESTAGKIVENLHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEVHHKWDVPETPEELQEEEDAVNAAQHYDV 188
            MESVVSSTTKDMKLNPSTPSPERPSNLXKIPLIRRTRCDSCSENVLSSTXTTPGIIAESRDPPETYGTRRTRTESTAGKIVENLHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEVHHKWDVPETPEELQEEEDAVNAAQHYDV
Sbjct:    1 MESVVSSTTKDMKLNPSTPSPERPSNLXKIPLIRRTRCDSCSENVLSSTXTTPGIIAESRDPPETYGTRRTRTESTAGKIVENLHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEVHHKWDVPETPEELQEEEDAVNAAQHYDV 188
[Close]
BLAST of EMLSAG00000003179 vs. SwissProt
Match: gi|75027588|sp|Q9VVA0.1|Y9705_DROME (RecName: Full=Cold shock domain-containing protein CG9705)

HSP 1 Score: 119.398 bits (298), Expect = 1.319e-33
Identity = 56/101 (55.45%), Postives = 75/101 (74.26%), Query Frame = 0 
Query:   68 TRRTRTESTAGKIVEN-LHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEVHHKWDVP 167
            TRRTRT ST+ + +EN +  G+VK F R++G GFITPN      ++ F H+SDIEGEYVP   D+VK+++C IPP++EK QAV V+I + TPEVHHKW+ P
Sbjct:   37 TRRTRTASTSARALENPVVTGMVKSFSRTKGHGFITPNA---GGEDVFCHVSDIEGEYVPMPGDEVKYRLCAIPPKYEKHQAVHVQISHLTPEVHHKWEEP 134
[Close]
BLAST of EMLSAG00000003179 vs. SwissProt
Match: gi|408360036|sp|Q91YQ3.2|CSDC2_MOUSE (RecName: Full=Cold shock domain-containing protein C2; AltName: Full=RNA-binding protein PIPPin)

HSP 1 Score: 97.4413 bits (241), Expect = 6.107e-25
Identity = 51/108 (47.22%), Postives = 68/108 (62.96%), Query Frame = 0 
Query:   60 RDPPETYGTRRTRTES-TAGKIVENLHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEV-HHKWD 165
            RD P    T+RTRT S TA      + +G+ K F RS+G GFITP    N +++ F+H+SDIEGEYVP   D+V +K+CPIPP+ +KFQAV+V +    P   H  W 
Sbjct:   44 RDLPSPLPTKRTRTYSATARASAGPVFKGVCKQFSRSQGHGFITPE---NGSEDIFVHVSDIEGEYVPVEGDEVTYKICPIPPKNQKFQAVEVVLTQLAPHTPHETWS 148
[Close]
BLAST of EMLSAG00000003179 vs. SwissProt
Match: gi|32129826|sp|Q63430.3|CSDC2_RAT (RecName: Full=Cold shock domain-containing protein C2; AltName: Full=RNA-binding protein PIPPin)

HSP 1 Score: 97.0561 bits (240), Expect = 8.896e-25
Identity = 51/108 (47.22%), Postives = 68/108 (62.96%), Query Frame = 0 
Query:   60 RDPPETYGTRRTRTES-TAGKIVENLHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEV-HHKWD 165
            RD P    T+RTRT S TA      + +G+ K F RS+G GFITP    N +++ F+H+SDIEGEYVP   D+V +K+CPIPP+ +KFQAV+V +    P   H  W 
Sbjct:   44 RDLPSPLPTKRTRTYSATARASAGPVFKGVCKQFSRSQGHGFITPE---NGSEDIFVHVSDIEGEYVPVEGDEVTYKMCPIPPKNQKFQAVEVVLTQLAPHTPHETWS 148
[Close]
BLAST of EMLSAG00000003179 vs. SwissProt
Match: gi|32129852|sp|Q9Y534.1|CSDC2_HUMAN (RecName: Full=Cold shock domain-containing protein C2; AltName: Full=RNA-binding protein PIPPin)

HSP 1 Score: 97.0561 bits (240), Expect = 9.342e-25
Identity = 51/108 (47.22%), Postives = 68/108 (62.96%), Query Frame = 0 
Query:   60 RDPPETYGTRRTRTES-TAGKIVENLHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEV-HHKWD 165
            RD P    T+RTRT S TA      + +G+ K F RS+G GFITP    N +++ F+H+SDIEGEYVP   D+V +K+CPIPP+ +KFQAV+V +    P   H  W 
Sbjct:   43 RDLPSPLPTKRTRTYSATARASAGPVFKGVCKQFSRSQGHGFITPE---NGSEDIFVHVSDIEGEYVPVEGDEVTYKMCPIPPKNQKFQAVEVVLTQLAPHTPHETWS 147
[Close]
BLAST of EMLSAG00000003179 vs. SwissProt
Match: gi|41016932|sp|Q9Y2V2.2|CHSP1_HUMAN (RecName: Full=Calcium-regulated heat-stable protein 1; AltName: Full=Calcium-regulated heat-stable protein of 24 kDa; Short=CRHSP-24)

HSP 1 Score: 95.5153 bits (236), Expect = 3.475e-24
Identity = 47/100 (47.00%), Postives = 65/100 (65.00%), Query Frame = 0 
Query:   68 TRRTRTESTAGKIVEN-LHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEVHHK-WD 165
            TRRTRT S   +  +  +++G+ K FCRS+G GFITP    +   + F+HISD+EGEYVP   D+V +K+C IPP+ EK QAV+V I +  P   H+ W 
Sbjct:   45 TRRTRTFSATVRASQGPVYKGVCKCFCRSKGHGFITPA---DGGPDIFLHISDVEGEYVPVEGDEVTYKMCSIPPKNEKLQAVEVVITHLAPGTKHETWS 141
[Close]
BLAST of EMLSAG00000003179 vs. SwissProt
Match: gi|41016763|sp|Q9WU49.1|CHSP1_RAT (RecName: Full=Calcium-regulated heat stable protein 1; AltName: Full=Calcium-regulated heat-stable protein of 24 kDa; Short=CRHSP-24)

HSP 1 Score: 95.5153 bits (236), Expect = 3.707e-24
Identity = 47/99 (47.47%), Postives = 65/99 (65.66%), Query Frame = 0 
Query:   68 TRRTRTESTAGKIVEN-LHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEVHHK-W 164
            TRRTRT S   +  +  +++G+ K FCRS+G GFITP    +   + F+HISD+EGEYVP   D+V +K+C IPP+ EK QAV+V I +  P   H+ W
Sbjct:   45 TRRTRTFSATVRASQGPVYKGVCKCFCRSKGHGFITPA---DGGPDIFLHISDVEGEYVPVEGDEVTYKMCSIPPKNEKLQAVEVVITHLAPGTKHETW 140
[Close]
BLAST of EMLSAG00000003179 vs. SwissProt
Match: gi|41016923|sp|Q9CR86.1|CHSP1_MOUSE (RecName: Full=Calcium-regulated heat stable protein 1; AltName: Full=Calcium-regulated heat-stable protein of 24 kDa; Short=CRHSP-24)

HSP 1 Score: 95.1301 bits (235), Expect = 4.377e-24
Identity = 47/99 (47.47%), Postives = 65/99 (65.66%), Query Frame = 0 
Query:   68 TRRTRTESTAGKIVEN-LHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEVHHK-W 164
            TRRTRT S   +  +  +++G+ K FCRS+G GFITP    +   + F+HISD+EGEYVP   D+V +K+C IPP+ EK QAV+V I +  P   H+ W
Sbjct:   46 TRRTRTFSATVRASQGPVYKGVCKCFCRSKGHGFITP---ADGGPDIFLHISDVEGEYVPVEGDEVTYKMCSIPPKNEKLQAVEVVITHLAPGTKHETW 141
[Close]
BLAST of EMLSAG00000003179 vs. Select Arthropod Genomes
Match: EEB19159.1 (calcium-regulated heat stable protein, putative [Pediculus humanus corporis])

HSP 1 Score: 122.479 bits (306), Expect = 3.464e-35
Identity = 59/99 (59.60%), Postives = 74/99 (74.75%), Query Frame = 0 
Query:   68 TRRTRTESTAGKIVEN-LHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEVHHKWD 165
            TRRTRT ST+ K  EN + +G VK FCR +G GFIT N+     ++ F+HISDIEGEYVP   D+V++++CPIPP+FEK QAV V II+ TPEVH KWD
Sbjct:   30 TRRTRTNSTSAKAFENPIEKGTVKMFCREKGHGFITSNR---TGEDIFVHISDIEGEYVPLPGDEVEYRLCPIPPKFEKTQAVHVNIIHLTPEVHVKWD 125
[Close]
BLAST of EMLSAG00000003179 vs. Select Arthropod Genomes
Match: AGB94665.1 (CG9705, isoform C [Drosophila melanogaster])

HSP 1 Score: 119.398 bits (298), Expect = 6.393e-34
Identity = 56/101 (55.45%), Postives = 75/101 (74.26%), Query Frame = 0 
Query:   68 TRRTRTESTAGKIVEN-LHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEVHHKWDVP 167
            TRRTRT ST+ + +EN +  G+VK F R++G GFITPN      ++ F H+SDIEGEYVP   D+VK+++C IPP++EK QAV V+I + TPEVHHKW+ P
Sbjct:   37 TRRTRTASTSARALENPVVTGMVKSFSRTKGHGFITPNA---GGEDVFCHVSDIEGEYVPMPGDEVKYRLCAIPPKYEKHQAVHVQISHLTPEVHHKWEEP 134
[Close]
BLAST of EMLSAG00000003179 vs. Select Arthropod Genomes
Match: AAN11740.1 (CG9705, isoform B [Drosophila melanogaster])

HSP 1 Score: 119.398 bits (298), Expect = 6.393e-34
Identity = 56/101 (55.45%), Postives = 75/101 (74.26%), Query Frame = 0 
Query:   68 TRRTRTESTAGKIVEN-LHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEVHHKWDVP 167
            TRRTRT ST+ + +EN +  G+VK F R++G GFITPN      ++ F H+SDIEGEYVP   D+VK+++C IPP++EK QAV V+I + TPEVHHKW+ P
Sbjct:   37 TRRTRTASTSARALENPVVTGMVKSFSRTKGHGFITPNA---GGEDVFCHVSDIEGEYVPMPGDEVKYRLCAIPPKYEKHQAVHVQISHLTPEVHHKWEEP 134
[Close]
BLAST of EMLSAG00000003179 vs. Select Arthropod Genomes
Match: AAF49414.1 (CG9705, isoform A [Drosophila melanogaster])

HSP 1 Score: 119.398 bits (298), Expect = 6.393e-34
Identity = 56/101 (55.45%), Postives = 75/101 (74.26%), Query Frame = 0 
Query:   68 TRRTRTESTAGKIVEN-LHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEVHHKWDVP 167
            TRRTRT ST+ + +EN +  G+VK F R++G GFITPN      ++ F H+SDIEGEYVP   D+VK+++C IPP++EK QAV V+I + TPEVHHKW+ P
Sbjct:   37 TRRTRTASTSARALENPVVTGMVKSFSRTKGHGFITPNA---GGEDVFCHVSDIEGEYVPMPGDEVKYRLCAIPPKYEKHQAVHVQISHLTPEVHHKWEEP 134
[Close]
BLAST of EMLSAG00000003179 vs. Select Arthropod Genomes
Match: EFX86454.1 (hypothetical protein DAPPUDRAFT_7593, partial [Daphnia pulex])

HSP 1 Score: 109.383 bits (272), Expect = 2.091e-30
Identity = 53/101 (52.48%), Postives = 69/101 (68.32%), Query Frame = 0 
Query:   68 TRRTRTESTAGKIVEN-LHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEVHHKWDVP 167
            T+RTRT S     +EN +  G++K FCR +G GFI  +    D ++ F+H+SDI+GEYVPR  DQV F+   IPP+ EKFQAV V+I NFTPEVH +W  P
Sbjct:   17 TKRTRTISMLEMAMENPIEHGVIKSFCRVKGHGFIKKD----DGEDIFVHVSDIDGEYVPRVGDQVSFRKLQIPPKMEKFQAVHVQITNFTPEVHQRWTSP 113
[Close]
BLAST of EMLSAG00000003179 vs. Select Arthropod Genomes
Match: EAA11357.4 (AGAP005641-PA [Anopheles gambiae str. PEST])

HSP 1 Score: 110.923 bits (276), Expect = 2.138e-30
Identity = 53/99 (53.54%), Postives = 71/99 (71.72%), Query Frame = 0 
Query:   68 TRRTRTESTAGKIVEN-LHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEVHHKWD 165
            TRRTRT ST+ + + N + EG VK F RS+G GFITPN   +D    F+HISDIEGEYVP   D+V +++C IPP++EK QA+ V+I + TPE H +W+
Sbjct:   50 TRRTRTASTSDRAMRNPIEEGKVKSFSRSKGHGFITPNAGGDD---IFVHISDIEGEYVPLPGDEVSYRLCSIPPKYEKVQAIHVQITHLTPEKHSRWE 145
[Close]
BLAST of EMLSAG00000003179 vs. Select Arthropod Genomes
Match: gb|EFA12910.1| (Cold shock domain-containing protein CG9705-like Protein [Tribolium castaneum])

HSP 1 Score: 106.301 bits (264), Expect = 4.324e-29
Identity = 52/100 (52.00%), Postives = 73/100 (73.00%), Query Frame = 0 
Query:   68 TRRTRTESTAGKIV--ENLHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEVHHKWD 165
            T+R RT ST  +I+  +NL+ G +K FCR +G GFITP    + +++ F+HISDIE EY+P   D+VK+++CPIPP+FEK QAV V I+N  PEVH +W+
Sbjct:   24 TKRNRTPSTCERILKHQNLY-GEIKSFCREKGHGFITPE---DGSEDIFVHISDIEDEYIPIPGDRVKYQLCPIPPKFEKHQAVHVHIVNLKPEVHKRWE 119
[Close]
BLAST of EMLSAG00000003179 vs. Select Arthropod Genomes
Match: EFX86455.1 (hypothetical protein DAPPUDRAFT_236661 [Daphnia pulex])

HSP 1 Score: 76.2554 bits (186), Expect = 2.798e-17
Identity = 41/108 (37.96%), Postives = 56/108 (51.85%), Query Frame = 0 
Query:   68 TRRTRTESTAGKIVENLHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEVHHKWDVPETPEELQE 175
            T+RTRT+S     ++N  E ++K                         H+  I+GEYVPR  D+V F+   +PP+ EK+QAV V+I NFTPEVH +W    T EE  E
Sbjct:   35 TKRTRTQSMLELALDNPVEHVLKIV---------------------LFHLFSIDGEYVPRIGDEVSFRKLLVPPKLEKYQAVHVQITNFTPEVHQRWTSALTAEESHE 121
[Close]
BLAST of EMLSAG00000003179 vs. nr
Match: gi|225712740|gb|ACO12216.1| (Cold shock domain-containing protein C2 [Lepeophtheirus salmonis] >gi|225713682|gb|ACO12687.1| Cold shock domain-containing protein C2 [Lepeophtheirus salmonis] >gi|290561012|gb|ADD37908.1| Cold shock domain-containing protein CG9705 [Lepeophtheirus salmonis])

HSP 1 Score: 384.415 bits (986), Expect = 3.541e-135
Identity = 186/188 (98.94%), Postives = 186/188 (98.94%), Query Frame = 0 
Query:    1 MESVVSSTTKDMKLNPSTPSPERPSNLXKIPLIRRTRCDSCSENVLSSTXTTPGIIAESRDPPETYGTRRTRTESTAGKIVENLHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEVHHKWDVPETPEELQEEEDAVNAAQHYDV 188
            MESVVSSTTKDMKLNPSTPSPERPSNL KIPLIRRTRCDSCSENVLSST TTPGIIAESRDPPETYGTRRTRTESTAGKIVENLHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEVHHKWDVPETPEELQEEEDAVNAAQHYDV
Sbjct:    1 MESVVSSTTKDMKLNPSTPSPERPSNLMKIPLIRRTRCDSCSENVLSSTTTTPGIIAESRDPPETYGTRRTRTESTAGKIVENLHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEVHHKWDVPETPEELQEEEDAVNAAQHYDV 188
[Close]
BLAST of EMLSAG00000003179 vs. nr
Match: gi|225712200|gb|ACO11946.1| (Cold shock domain-containing protein C2 [Lepeophtheirus salmonis])

HSP 1 Score: 380.563 bits (976), Expect = 1.186e-133
Identity = 185/188 (98.40%), Postives = 185/188 (98.40%), Query Frame = 0 
Query:    1 MESVVSSTTKDMKLNPSTPSPERPSNLXKIPLIRRTRCDSCSENVLSSTXTTPGIIAESRDPPETYGTRRTRTESTAGKIVENLHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEVHHKWDVPETPEELQEEEDAVNAAQHYDV 188
            MESVVSSTTKDMKLNPSTPSPERPSNL KIPLIRRTRCDSCSENVLSST TTPGIIAESRDPPETYGTRRTRTESTAGKIVENLHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRD QVKFKVCPIPPRFEKFQAVQVRIINFTPEVHHKWDVPETPEELQEEEDAVNAAQHYDV
Sbjct:    1 MESVVSSTTKDMKLNPSTPSPERPSNLMKIPLIRRTRCDSCSENVLSSTTTTPGIIAESRDPPETYGTRRTRTESTAGKIVENLHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDCQVKFKVCPIPPRFEKFQAVQVRIINFTPEVHHKWDVPETPEELQEEEDAVNAAQHYDV 188
[Close]
BLAST of EMLSAG00000003179 vs. nr
Match: gi|290463071|gb|ADD24583.1| (Cold shock domain-containing protein CG9705 [Lepeophtheirus salmonis])

HSP 1 Score: 315.464 bits (807), Expect = 4.230e-108
Identity = 153/156 (98.08%), Postives = 153/156 (98.08%), Query Frame = 0 
Query:    1 MESVVSSTTKDMKLNPSTPSPERPSNLXKIPLIRRTRCDSCSENVLSSTXTTPGIIAESRDPPETYGTRRTRTESTAGKIVENLHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINF 156
            MESVVSSTTKDMKLNPSTPSPERPSNL KIPLIRRTRCDSCSENVLSST TTPGIIAESRDPPETYGTRRTRTESTAGKIVENLHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIIN 
Sbjct:    1 MESVVSSTTKDMKLNPSTPSPERPSNLMKIPLIRRTRCDSCSENVLSSTTTTPGIIAESRDPPETYGTRRTRTESTAGKIVENLHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINL 156
[Close]
BLAST of EMLSAG00000003179 vs. nr
Match: gi|225709220|gb|ACO10456.1| (Cold shock domain-containing protein C2 [Caligus rogercresseyi] >gi|225711724|gb|ACO11708.1| Cold shock domain-containing protein C2 [Caligus rogercresseyi])

HSP 1 Score: 267.7 bits (683), Expect = 6.216e-89
Identity = 143/193 (74.09%), Postives = 162/193 (83.94%), Query Frame = 0 
Query:    1 MESVVSSTTKDM-----KLNPSTPSPERPSNLXKIPLIRRTRCDSCSENVLSSTXTTPGIIAESRDPPETYGTRRTRTESTAGKIVENLHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEVHHKWDVPETPEELQEEEDAVNAAQHYDV 188
            MESVVSSTT++      KL+P +P      +L KIP IRRTRCDSCSEN LSST     +++E+ DPPET+ TRRTRTEST+GK  ENL EG VKYFCRSRGFGF+TPNKP+N NKEFFMHISDIEGE+VPRR+D V+FKVCPIPPRFEKFQAVQVRI NFTPEVHHKWDVPETPEELQEEE+AV++A HYDV
Sbjct:    1 MESVVSSTTRESEDESSKLSPLSPERSASHHLMKIPAIRRTRCDSCSENGLSSTT----LLSEALDPPETFVTRRTRTESTSGKTTENLVEGTVKYFCRSRGFGFLTPNKPVNGNKEFFMHISDIEGEFVPRRNDTVQFKVCPIPPRFEKFQAVQVRITNFTPEVHHKWDVPETPEELQEEEEAVSSAPHYDV 189
[Close]
BLAST of EMLSAG00000003179 vs. nr
Match: gi|225719590|gb|ACO15641.1| (Cold shock domain-containing protein C2 [Caligus clemensi])

HSP 1 Score: 266.544 bits (680), Expect = 8.836e-89
Identity = 139/188 (73.94%), Postives = 158/188 (84.04%), Query Frame = 0 
Query:    1 MESVVSSTTKDMKLNPSTPSPERPSNLXKIPLIRRTRCDSCSENVLSSTXTTPGIIAESRDPPETYGTRRTRTESTAGKIVENLHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEVHHKWDVPETPEELQEEEDAVNAAQHYDV 188
            ME VVSSTTKD++L              KIPL RRTRCDSCSE+ LSST     +++ES DPPET+ TRRTRTEST+GK  EN+HEG VKYFCRSRGFGFITPNK +NDN+EFFMHISDIEGE+VPRR+D V+FKVCPIPPRFEKFQAVQVRIINFTPEVHHKWDVPETPEEL+EEE+A+++A HYDV
Sbjct:    1 MEGVVSSTTKDVRL-------------LKIPLSRRTRCDSCSESALSSTT----VLSESLDPPETFATRRTRTESTSGKTTENIHEGTVKYFCRSRGFGFITPNKSVNDNQEFFMHISDIEGEFVPRRNDSVQFKVCPIPPRFEKFQAVQVRIINFTPEVHHKWDVPETPEELKEEEEAISSAPHYDV 171
[Close]
BLAST of EMLSAG00000003179 vs. nr
Match: gi|225708686|gb|ACO10189.1| (Cold shock domain-containing protein C2 [Caligus rogercresseyi])

HSP 1 Score: 266.159 bits (679), Expect = 2.471e-88
Identity = 142/193 (73.58%), Postives = 162/193 (83.94%), Query Frame = 0 
Query:    1 MESVVSSTTKDM-----KLNPSTPSPERPSNLXKIPLIRRTRCDSCSENVLSSTXTTPGIIAESRDPPETYGTRRTRTESTAGKIVENLHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEVHHKWDVPETPEELQEEEDAVNAAQHYDV 188
            MESVVSSTT++      KL+P +P      +L KIP IRRTRCDSCSEN LSST     +++E+ DPPET+ TRRTRTEST+GK  ENL EG VKYFCRSRGFGF+TPNKP+N NKEFFMHISDIEGE+VPRR+D V+FKVCPIPPRFEKFQAVQVRI NFTPEVHHKWDVPETPEELQEEE+AV++A H+DV
Sbjct:    1 MESVVSSTTRESEDESSKLSPLSPERSASHHLMKIPAIRRTRCDSCSENGLSSTT----LLSEALDPPETFVTRRTRTESTSGKTTENLVEGTVKYFCRSRGFGFLTPNKPVNGNKEFFMHISDIEGEFVPRRNDTVQFKVCPIPPRFEKFQAVQVRITNFTPEVHHKWDVPETPEELQEEEEAVSSAPHFDV 189
[Close]
BLAST of EMLSAG00000003179 vs. nr
Match: gi|985420653|ref|XP_015375762.1| (PREDICTED: cold shock domain-containing protein CG9705 [Diuraphis noxia])

HSP 1 Score: 131.724 bits (330), Expect = 4.541e-36
Identity = 66/119 (55.46%), Postives = 84/119 (70.59%), Query Frame = 0 
Query:   51 TTPGIIAESRDPPETYGTRRTRTESTAGKIVEN-LHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEVHHKWDVPE 168
            T  G++A     P    TRRTRT+ST+   ++N L  G VKYFC+S+G GFITP+   N + + F+HISDIEGEYVP   DQV +++CPIPP+ EKFQAV V I+N TP+VH KWD PE
Sbjct:   23 TKGGMLA-----PSPIVTRRTRTDSTSALALKNPLLSGKVKYFCKSKGHGFITPD---NGDPDTFVHISDIEGEYVPLPGDQVHYRLCPIPPKLEKFQAVHVEIVNLTPQVHLKWDSPE 133
[Close]
BLAST of EMLSAG00000003179 vs. nr
Match: gi|1058261306|gb|JAT34138.1| (hypothetical protein g.25279 [Graphocephala atropunctata])

HSP 1 Score: 131.339 bits (329), Expect = 5.448e-36
Identity = 63/101 (62.38%), Postives = 78/101 (77.23%), Query Frame = 0 
Query:   68 TRRTRTESTAGKIVENLHE-GIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEVHHKWDVP 167
            TRRTRT+S   + + N  E G VK+FCRS+G GFITP+K     +E F+HISDIEGEYVP   D+V++++CPIPP+FEKFQAV V IINFTPEVH +WD P
Sbjct:   36 TRRTRTDSMCARALLNPQERGKVKHFCRSKGHGFITPSK---GGQEVFLHISDIEGEYVPLPGDEVEYRLCPIPPKFEKFQAVHVHIINFTPEVHLRWDAP 133
[Close]
BLAST of EMLSAG00000003179 vs. nr
Match: gi|939657028|ref|XP_014276810.1| (PREDICTED: cold shock domain-containing protein CG9705 [Halyomorpha halys])

HSP 1 Score: 129.413 bits (324), Expect = 3.404e-35
Identity = 62/105 (59.05%), Postives = 79/105 (75.24%), Query Frame = 0 
Query:   68 TRRTRTESTAGKIVENLHE-GIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEVHHKWDVPETPE 171
            TRRTRT+ST+ +   N  E G+VK F RS+G GFI  +   ++ +  F+HISD+EGEYVP   D+V +++CPIPP+FEKFQAV V I+NFTPEVH KWD PETPE
Sbjct:   30 TRRTRTDSTSARAFSNPQEHGVVKQFSRSKGHGFIQRD---SNGETLFVHISDVEGEYVPLPGDKVTYRLCPIPPKFEKFQAVHVEIVNFTPEVHLKWDTPETPE 131
[Close]
BLAST of EMLSAG00000003179 vs. nr
Match: gi|929382165|ref|XP_014101570.1| (PREDICTED: cold shock domain-containing protein CG9705, partial [Bactrocera oleae])

HSP 1 Score: 128.257 bits (321), Expect = 8.371e-35
Identity = 59/105 (56.19%), Postives = 80/105 (76.19%), Query Frame = 0 
Query:   68 TRRTRTESTAGKIVEN-LHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEVHHKWDVPETPE 171
            T+RTRT ST+ + +EN +  GIVK F RS+G GFITP    +  +E F H+SDI+GEYVP++ D+V++++C IPP+FEK QAV V+IIN TPEVHHKW+ P  P+
Sbjct:   22 TKRTRTASTSARALENPIETGIVKAFSRSKGHGFITPK---SGGEELFCHVSDIDGEYVPQQGDEVRYRLCAIPPKFEKHQAVHVQIINLTPEVHHKWEEPVYPD 123
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BLAST of EMLSAG00000003179 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold770_size100439-snap-gene-0.29 (protein:Tk05395 transcript:maker-scaffold770_size100439-snap-gene-0.29-mRNA-1 annotation:"cold shock domain-containing protein c2")

HSP 1 Score: 151.369 bits (381), Expect = 2.185e-47
Identity = 65/118 (55.08%), Postives = 93/118 (78.81%), Query Frame = 0 
Query:   63 PETYGTRRTRTESTAGKIVENLHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEVHHKWDVPETPEELQEEEDAV 180
            PE   TRRTRT+S +G+I + +H+G+VK+FCRS+G GFI P      +   FMHISDI+GE++PR+ D V+FK+CP+PP+F+KFQAV + I++FTPEVHH+W   ETP+EL+E++ A+
Sbjct:   28 PELIITRRTRTQSMSGRIEDQVHKGMVKFFCRSKGHGFIIPLN--GSDNPVFMHISDIDGEFIPRKGDTVRFKLCPMPPKFDKFQAVHITIVDFTPEVHHRWTEKETPQELEEDKKAL 143
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BLAST of EMLSAG00000003179 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold211_size255937-snap-gene-1.14 (protein:Tk07168 transcript:maker-scaffold211_size255937-snap-gene-1.14-mRNA-1 annotation:"cold shock domain-containing protein c2")

HSP 1 Score: 146.747 bits (369), Expect = 3.140e-45
Identity = 67/144 (46.53%), Postives = 99/144 (68.75%), Query Frame = 0 
Query:   34 RRTRCDSCSENVLSSTXTTPGIIAESRDPPETYGTRRTRTESTAGKIVENLHEGIVKYFCRSRGFGFITPNKPINDNKEFFMHISDIEGEYVPRRDDQVKFKVCPIPPRFEKFQAVQVRIINFTPEVHHKWDVPETPEELQEEE 177
            RR RC SCSE+   +         +  +  E Y  ++ R++S  G+IV+++  G VKYFCRSRG GF+ P++  N + + FMHISDIEG+YVP+R D+V ++ CP+PP+F KFQAV V I+  +P+ H KW+ PETPEE++E++
Sbjct:   34 RRARCISCSESGQYANLELSLDPEDEEEFLERYMAKKNRSDSLVGRIVDDIKFGTVKYFCRSRGHGFLNPDE--NASHDLFMHISDIEGDYVPKRGDRVSYRPCPLPPKFNKFQAVHVHILKCSPQTHRKWESPETPEEIEEDK 175
The following BLAST results are available for this feature:
BLAST of EMLSAG00000003179 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 25
Match NameE-valueIdentityDescription
-2.101e-3255.45symbol:CG9705 species:7227 "Drosophila melanogaste... [more]
-8.165e-2649.52symbol:CSDC2 "Uncharacterized protein" species:903... [more]
-4.994e-2549.54symbol:CSDC2 "Uncharacterized protein" species:991... [more]
-3.834e-2445.87symbol:CSDC2 "Uncharacterized protein" species:982... [more]
-6.017e-2447.22symbol:Csdc2 "cold shock domain containing C2, RNA... [more]
-7.617e-2449.00symbol:CARHSP1 "Uncharacterized protein" species:9... [more]
-8.667e-2447.22symbol:Csdc2 "Cold shock domain-containing protein... [more]
-8.667e-2447.22symbol:Csdc2 "cold shock domain containing C2, RNA... [more]
-9.113e-2447.22symbol:CSDC2 "Cold shock domain-containing protein... [more]
-1.736e-2347.47symbol:CARHSP1 "Uncharacterized protein" species:9... [more]

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BLAST of EMLSAG00000003179 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 3
Match NameE-valueIdentityDescription
gi|592884225|gb|GAXK01074150.1|2.070e-2646.67TSA: Calanus finmarchicus comp123745_c1_seq1 trans... [more]
gi|592777199|gb|GAXK01177369.1|2.043e-130.91TSA: Calanus finmarchicus comp3960794_c0_seq1 tran... [more]
gi|592798421|gb|GAXK01156147.1|6.657e+033.33TSA: Calanus finmarchicus comp284306_c1_seq1 trans... [more]
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BLAST of EMLSAG00000003179 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000031797.115e-137100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s176:37897... [more]
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BLAST of EMLSAG00000003179 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
gi|75027588|sp|Q9VVA0.1|Y9705_DROME1.319e-3355.45RecName: Full=Cold shock domain-containing protein... [more]
gi|408360036|sp|Q91YQ3.2|CSDC2_MOUSE6.107e-2547.22RecName: Full=Cold shock domain-containing protein... [more]
gi|32129826|sp|Q63430.3|CSDC2_RAT8.896e-2547.22RecName: Full=Cold shock domain-containing protein... [more]
gi|32129852|sp|Q9Y534.1|CSDC2_HUMAN9.342e-2547.22RecName: Full=Cold shock domain-containing protein... [more]
gi|41016932|sp|Q9Y2V2.2|CHSP1_HUMAN3.475e-2447.00RecName: Full=Calcium-regulated heat-stable protei... [more]
gi|41016763|sp|Q9WU49.1|CHSP1_RAT3.707e-2447.47RecName: Full=Calcium-regulated heat stable protei... [more]
gi|41016923|sp|Q9CR86.1|CHSP1_MOUSE4.377e-2447.47RecName: Full=Calcium-regulated heat stable protei... [more]
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BLAST of EMLSAG00000003179 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 8
Match NameE-valueIdentityDescription
EEB19159.13.464e-3559.60calcium-regulated heat stable protein, putative [P... [more]
AGB94665.16.393e-3455.45CG9705, isoform C [Drosophila melanogaster][more]
AAN11740.16.393e-3455.45CG9705, isoform B [Drosophila melanogaster][more]
AAF49414.16.393e-3455.45CG9705, isoform A [Drosophila melanogaster][more]
EFX86454.12.091e-3052.48hypothetical protein DAPPUDRAFT_7593, partial [Dap... [more]
EAA11357.42.138e-3053.54AGAP005641-PA [Anopheles gambiae str. PEST][more]
gb|EFA12910.1|4.324e-2952.00Cold shock domain-containing protein CG9705-like P... [more]
EFX86455.12.798e-1737.96hypothetical protein DAPPUDRAFT_236661 [Daphnia pu... [more]
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BLAST of EMLSAG00000003179 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25
Match NameE-valueIdentityDescription
gi|225712740|gb|ACO12216.1|3.541e-13598.94Cold shock domain-containing protein C2 [Lepeophth... [more]
gi|225712200|gb|ACO11946.1|1.186e-13398.40Cold shock domain-containing protein C2 [Lepeophth... [more]
gi|290463071|gb|ADD24583.1|4.230e-10898.08Cold shock domain-containing protein CG9705 [Lepeo... [more]
gi|225709220|gb|ACO10456.1|6.216e-8974.09Cold shock domain-containing protein C2 [Caligus r... [more]
gi|225719590|gb|ACO15641.1|8.836e-8973.94Cold shock domain-containing protein C2 [Caligus c... [more]
gi|225708686|gb|ACO10189.1|2.471e-8873.58Cold shock domain-containing protein C2 [Caligus r... [more]
gi|985420653|ref|XP_015375762.1|4.541e-3655.46PREDICTED: cold shock domain-containing protein CG... [more]
gi|1058261306|gb|JAT34138.1|5.448e-3662.38hypothetical protein g.25279 [Graphocephala atropu... [more]
gi|939657028|ref|XP_014276810.1|3.404e-3559.05PREDICTED: cold shock domain-containing protein CG... [more]
gi|929382165|ref|XP_014101570.1|8.371e-3556.19PREDICTED: cold shock domain-containing protein CG... [more]

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BLAST of EMLSAG00000003179 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 2
Match NameE-valueIdentityDescription
maker-scaffold770_size100439-snap-gene-0.292.185e-4755.08protein:Tk05395 transcript:maker-scaffold770_size1... [more]
maker-scaffold211_size255937-snap-gene-1.143.140e-4546.53protein:Tk07168 transcript:maker-scaffold211_size2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s176supercontigLSalAtl2s176:378973..380312 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s176-augustus-gene-3.18
Biotypeprotein_coding
EvidenceIEA
NoteCold shock domain-containing protein C2 [Lepeophtheirus salmonis]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000003179 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000003179EMLSAT00000003179-699026Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s176:378973..380312+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000003179-685945 ID=EMLSAG00000003179-685945|Name=EMLSAG00000003179|organism=Lepeophtheirus salmonis|type=gene|length=1340bp|location=Sequence derived from alignment at LSalAtl2s176:378973..380312+ (Lepeophtheirus salmonis)
GAATTCAAAACAACGTGCCCTAAGAAGTGCGTAAAAGTTGCGTACAATCT
GATATTATATTCGTTCTCATTCCGTGTTCACCATTTCTTGCTTTTAAGAT
GGAGAGTGTCGTGAGTTCGACTACCAAGGATATGAAGCTCAACCCAAGCA
CCCCATCCCCAGAACGGCCCTCAAATCTCATSAAGATTCCACTCATTCGA
AGAACACGCTGCGATTCATGCTCCGAGAATGTACTCAGCTCCACTKCGAC
CACTCCTGGAATCATTGCGGAGTCCCGTGACCCACCAGAGACCTATGGTA
CAAGGCGTACACGGACAGAGTCCACAGCGGGGAAGATTGTGGAGAATTTG
CATGAGGGAATTGTCAAATATTTCTGTCGATCCAGGGGGTTCGGATTCAT
CACACCCAATAAAGTAAACATTCCCCTCCCCCCCGCCAACCCCAGGCCTT
ATTCATTAGCATTGTAAGATTGTGTACTTATCCAATCCTCTTCCTCCTTT
TTCAGCCCATTAATGATAACAAAGAGTTCTTCATGCATATTTCTGACATT
GAAGGAGAGTACGTGCCTCGACGAGACGATCAAGTCAAGTTCAAAGTTTG
TCCTATCCCTCCACGATTTGAAAAGTTTCAAGCTGTTCAAGTACGAATAA
TTAATTTTACTCCAGAAGTGCATCACAAATGGGATGTTCCTGAGACTCCA
GAGGAACTGCAAGAGGAAGAAGATGCTGTGAACGCCGCGCAACACTATGA
TGTTTAAAGATGGTGATGATGATGATTACATAAAATAACAGAAATCTCTT
CTAATTACTAATCCATATTATTTTATATACACATTCTTTATTCATTAATT
ATATATTTAAAAAAACAACCGAATACTTAATAAAACACATTGGATTTTAT
TCTAGTAACATTCAATGTGGATTCCATTGTCGTCTTATATCAAAAGTATA
ATATATATATCAATCATATGATGTATTTTTGATTTTATACACAAGTCCTG
ACTTGCGCTTCAACATGCTTATTGCTTTGATGTCATCCGAGTATGTAATG
TCTTCATAATTAATATATCGATTTTCATAATATTGTATGAAGTGGTGTTG
CATATTATGTAAAAAGGAATTACTTGCATCACTTTGATTTGATAATATTA
TGTAAAAGCTTAATAATGATGTGCTAATACACTTTATATCAAATACCATT
CTCTATCAATTATATCTTTAAAGGTTATTGATTTGATCAAGCATATTCAT
ACTTACTTAATTGTATTATATTATAAATTCACACAAATATAGGTATATAG
TAAATACTTACCTATTCAATATTTATCTACAAATAATAAA
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