EMLSAG00000005727, EMLSAG00000005727-688493 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000005727 vs. C. finmarchicus
Match: gi|592835137|gb|GAXK01122407.1| (TSA: Calanus finmarchicus comp107480_c0_seq1 transcribed RNA sequence) HSP 1 Score: 50.8322 bits (120), Expect = 1.456e-6 Identity = 36/109 (33.03%), Postives = 47/109 (43.12%), Query Frame = 0 Query: 82 RPRKTGANSKYPICSYEDTNFLGADINILNSLE----TDSAYECKFDCKATKNCKFWTFDEEARRG--DNNCFLIE------------------SGTRRNNCKCLRRTD 166 RP +TG P CSY +T+F G D+ + E SA CK C+ C FWT+ E R +CFL E SGT+ NNC C++ D Sbjct: 783 RPIQTGDRLPLPKCSYINTDFPGDDLILEGYTEPGINAGSARACKARCRLDDACSFWTYKEGFSRDTLTLDCFLKEGTPGLPVPREAVPRLGFVSGTQDNNCVCIKSED 1109
BLAST of EMLSAG00000005727 vs. C. finmarchicus
Match: gi|592779700|gb|GAXK01174868.1| (TSA: Calanus finmarchicus comp723223_c0_seq1 transcribed RNA sequence) HSP 1 Score: 46.2098 bits (108), Expect = 4.872e-5 Identity = 38/109 (34.86%), Postives = 45/109 (41.28%), Query Frame = 0 Query: 83 PRKTGANSKYPICSYEDTNFLGADINILN-----SLETDSAYECKFDCKATKNCKFWTFDEEARRG--DNNCFLIE------------------SGTRRNNCKCLRRTD 166 P TG P CSY +T+F G DI IL+ + SA CK CK C FWT+ E R +CFL E SGT NNC C+ D Sbjct: 591 PVLTGDRLPLPECSYVNTDFPGDDI-ILSEDGSLGINAGSARACKARCKLENACLFWTYREGFNRDTETRDCFLKEGTPGLPVPRDAVPRIGFVSGTPDNNCICIPSED 914
BLAST of EMLSAG00000005727 vs. C. finmarchicus
Match: gi|592779699|gb|GAXK01174869.1| (TSA: Calanus finmarchicus comp723223_c0_seq2 transcribed RNA sequence) HSP 1 Score: 45.8246 bits (107), Expect = 5.953e-5 Identity = 38/109 (34.86%), Postives = 45/109 (41.28%), Query Frame = 0 Query: 83 PRKTGANSKYPICSYEDTNFLGADINILN-----SLETDSAYECKFDCKATKNCKFWTFDEEARRG--DNNCFLIE------------------SGTRRNNCKCLRRTD 166 P TG P CSY +T+F G DI IL+ + SA CK CK C FWT+ E R +CFL E SGT NNC C+ D Sbjct: 591 PVLTGDRLPLPECSYVNTDFPGDDI-ILSEDGSLGINAGSARACKARCKLENACLFWTYREGFNRDTETRDCFLKEGTPGLPVPRDAVPRIGFVSGTPDNNCICIPSED 914
BLAST of EMLSAG00000005727 vs. C. finmarchicus
Match: gi|592920391|gb|GAXK01037984.1| (TSA: Calanus finmarchicus comp1202161_c0_seq1 transcribed RNA sequence) HSP 1 Score: 41.9726 bits (97), Expect = 1.044e-3 Identity = 30/98 (30.61%), Postives = 41/98 (41.84%), Query Frame = 0 Query: 93 PICSYEDTNFLGADI----NILNSLETDSAYECKFDCKATKNCKFWTFDEEARRG--DNNCFLIE------------------SGTRRNNCKCLRRTD 166 P CSY +T+F G D+ + + SA CK C+ C FW++ E R +CFL E SGT NNC C++ D Sbjct: 289 PKCSYINTDFPGDDLLFDDDTEPGINAGSARGCKARCRQEDACSFWSYREGNNRDTFTRDCFLKEGTPGLPVPRAAVPRIGFVSGTSDNNCICIKSED 582
BLAST of EMLSAG00000005727 vs. C. finmarchicus
Match: gi|592861309|gb|GAXK01096253.1| (TSA: Calanus finmarchicus comp55543_c4_seq10 transcribed RNA sequence) HSP 1 Score: 40.4318 bits (93), Expect = 4.155e-3 Identity = 20/61 (32.79%), Postives = 33/61 (54.10%), Query Frame = 0 Query: 83 PRKTGANSKYPICSYEDTNFLGADINILNSLETDSAYECKFDCKATKNCKFWTFDEEARRG 143 P T + S Y +C+Y +F G D L S+ + +C+ C+ +C+ +TFD+E RG Sbjct: 2577 PTPTDSPSTYSVCTYNSLDFQGGD---LFSVLANDVDDCRQQCEDHVSCQLFTFDKELERG 2750 HSP 2 Score: 30.4166 bits (67), Expect = 6.384e+0 Identity = 21/63 (33.33%), Postives = 33/63 (52.38%), Query Frame = 0 Query: 93 PICSYED-TNFLGADINIL---NSLET--DSAYECKFDCKATKNCKFWTFDEEARRGDNNCFL 149 P C Y D T F+G D+ + +ET +S+ +C +C+ CK+WT+ + NCFL Sbjct: 2829 PQCLYNDQTEFVGGDLPEVFGGGGVETSMESSADCIEECEKRSGCKYWTWVMGEKV---NCFL 3008
BLAST of EMLSAG00000005727 vs. C. finmarchicus
Match: gi|592861310|gb|GAXK01096252.1| (TSA: Calanus finmarchicus comp55543_c4_seq9 transcribed RNA sequence) HSP 1 Score: 40.4318 bits (93), Expect = 4.161e-3 Identity = 20/61 (32.79%), Postives = 33/61 (54.10%), Query Frame = 0 Query: 83 PRKTGANSKYPICSYEDTNFLGADINILNSLETDSAYECKFDCKATKNCKFWTFDEEARRG 143 P T + S Y +C+Y +F G D L S+ + +C+ C+ +C+ +TFD+E RG Sbjct: 2628 PTPTDSPSTYSVCTYNSLDFQGGD---LFSVLANDVDDCRQQCEDHVSCQLFTFDKELERG 2801 HSP 2 Score: 30.4166 bits (67), Expect = 6.391e+0 Identity = 21/63 (33.33%), Postives = 33/63 (52.38%), Query Frame = 0 Query: 93 PICSYED-TNFLGADINIL---NSLET--DSAYECKFDCKATKNCKFWTFDEEARRGDNNCFL 149 P C Y D T F+G D+ + +ET +S+ +C +C+ CK+WT+ + NCFL Sbjct: 2880 PQCLYNDQTEFVGGDLPEVFGGGGVETSMESSADCIEECEKRSGCKYWTWVMGEKV---NCFL 3059
BLAST of EMLSAG00000005727 vs. C. finmarchicus
Match: gi|592861311|gb|GAXK01096251.1| (TSA: Calanus finmarchicus comp55543_c4_seq8 transcribed RNA sequence) HSP 1 Score: 40.4318 bits (93), Expect = 4.163e-3 Identity = 20/61 (32.79%), Postives = 33/61 (54.10%), Query Frame = 0 Query: 83 PRKTGANSKYPICSYEDTNFLGADINILNSLETDSAYECKFDCKATKNCKFWTFDEEARRG 143 P T + S Y +C+Y +F G D L S+ + +C+ C+ +C+ +TFD+E RG Sbjct: 2643 PTPTDSPSTYSVCTYNSLDFQGGD---LFSVLANDVDDCRQQCEDHVSCQLFTFDKELERG 2816 HSP 2 Score: 30.4166 bits (67), Expect = 6.393e+0 Identity = 21/63 (33.33%), Postives = 33/63 (52.38%), Query Frame = 0 Query: 93 PICSYED-TNFLGADINIL---NSLET--DSAYECKFDCKATKNCKFWTFDEEARRGDNNCFL 149 P C Y D T F+G D+ + +ET +S+ +C +C+ CK+WT+ + NCFL Sbjct: 2895 PQCLYNDQTEFVGGDLPEVFGGGGVETSMESSADCIEECEKRSGCKYWTWVMGEKV---NCFL 3074
BLAST of EMLSAG00000005727 vs. C. finmarchicus
Match: gi|592861312|gb|GAXK01096250.1| (TSA: Calanus finmarchicus comp55543_c4_seq7 transcribed RNA sequence) HSP 1 Score: 40.4318 bits (93), Expect = 4.169e-3 Identity = 20/61 (32.79%), Postives = 33/61 (54.10%), Query Frame = 0 Query: 83 PRKTGANSKYPICSYEDTNFLGADINILNSLETDSAYECKFDCKATKNCKFWTFDEEARRG 143 P T + S Y +C+Y +F G D L S+ + +C+ C+ +C+ +TFD+E RG Sbjct: 2694 PTPTDSPSTYSVCTYNSLDFQGGD---LFSVLANDVDDCRQQCEDHVSCQLFTFDKELERG 2867 HSP 2 Score: 30.4166 bits (67), Expect = 6.399e+0 Identity = 21/63 (33.33%), Postives = 33/63 (52.38%), Query Frame = 0 Query: 93 PICSYED-TNFLGADINIL---NSLET--DSAYECKFDCKATKNCKFWTFDEEARRGDNNCFL 149 P C Y D T F+G D+ + +ET +S+ +C +C+ CK+WT+ + NCFL Sbjct: 2946 PQCLYNDQTEFVGGDLPEVFGGGGVETSMESSADCIEECEKRSGCKYWTWVMGEKV---NCFL 3125
BLAST of EMLSAG00000005727 vs. C. finmarchicus
Match: gi|592861313|gb|GAXK01096249.1| (TSA: Calanus finmarchicus comp55543_c4_seq6 transcribed RNA sequence) HSP 1 Score: 40.4318 bits (93), Expect = 4.213e-3 Identity = 20/61 (32.79%), Postives = 33/61 (54.10%), Query Frame = 0 Query: 83 PRKTGANSKYPICSYEDTNFLGADINILNSLETDSAYECKFDCKATKNCKFWTFDEEARRG 143 P T + S Y +C+Y +F G D L S+ + +C+ C+ +C+ +TFD+E RG Sbjct: 3128 PTPTDSPSTYSVCTYNSLDFQGGD---LFSVLANDVDDCRQQCEDHVSCQLFTFDKELERG 3301 HSP 2 Score: 30.4166 bits (67), Expect = 6.448e+0 Identity = 21/63 (33.33%), Postives = 33/63 (52.38%), Query Frame = 0 Query: 93 PICSYED-TNFLGADINIL---NSLET--DSAYECKFDCKATKNCKFWTFDEEARRGDNNCFL 149 P C Y D T F+G D+ + +ET +S+ +C +C+ CK+WT+ + NCFL Sbjct: 3380 PQCLYNDQTEFVGGDLPEVFGGGGVETSMESSADCIEECEKRSGCKYWTWVMGEKV---NCFL 3559
BLAST of EMLSAG00000005727 vs. C. finmarchicus
Match: gi|592861314|gb|GAXK01096248.1| (TSA: Calanus finmarchicus comp55543_c4_seq5 transcribed RNA sequence) HSP 1 Score: 40.4318 bits (93), Expect = 4.215e-3 Identity = 20/61 (32.79%), Postives = 33/61 (54.10%), Query Frame = 0 Query: 83 PRKTGANSKYPICSYEDTNFLGADINILNSLETDSAYECKFDCKATKNCKFWTFDEEARRG 143 P T + S Y +C+Y +F G D L S+ + +C+ C+ +C+ +TFD+E RG Sbjct: 3154 PTPTDSPSTYSVCTYNSLDFQGGD---LFSVLANDVDDCRQQCEDHVSCQLFTFDKELERG 3327 HSP 2 Score: 30.4166 bits (67), Expect = 6.451e+0 Identity = 21/63 (33.33%), Postives = 33/63 (52.38%), Query Frame = 0 Query: 93 PICSYED-TNFLGADINIL---NSLET--DSAYECKFDCKATKNCKFWTFDEEARRGDNNCFL 149 P C Y D T F+G D+ + +ET +S+ +C +C+ CK+WT+ + NCFL Sbjct: 3406 PQCLYNDQTEFVGGDLPEVFGGGGVETSMESSADCIEECEKRSGCKYWTWVMGEKV---NCFL 3585
BLAST of EMLSAG00000005727 vs. L. salmonis peptides
Match: EMLSAP00000005727 (pep:novel supercontig:LSalAtl2s:LSalAtl2s309:715420:717244:1 gene:EMLSAG00000005727 transcript:EMLSAT00000005727 description:"maker-LSalAtl2s309-augustus-gene-7.78") HSP 1 Score: 471.855 bits (1213), Expect = 3.378e-170 Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0 Query: 1 MNILPLSFVVFLISIKEVTCQSLEEVSSLLSSNEKLVDENVEVFKEDFVEFFYAPSRYFRYRNRYRRFYPQYYNIRNQFVKRPRKTGANSKYPICSYEDTNFLGADINILNSLETDSAYECKFDCKATKNCKFWTFDEEARRGDNNCFLIESGTRRNNCKCLRRTDFIEVENEPDTDIGSDARRRRRRRRNRPKICPRGVKESDDIDYTYDDYEEFNENLKKKSQNSTMSGA 232 MNILPLSFVVFLISIKEVTCQSLEEVSSLLSSNEKLVDENVEVFKEDFVEFFYAPSRYFRYRNRYRRFYPQYYNIRNQFVKRPRKTGANSKYPICSYEDTNFLGADINILNSLETDSAYECKFDCKATKNCKFWTFDEEARRGDNNCFLIESGTRRNNCKCLRRTDFIEVENEPDTDIGSDARRRRRRRRNRPKICPRGVKESDDIDYTYDDYEEFNENLKKKSQNSTMSGA Sbjct: 1 MNILPLSFVVFLISIKEVTCQSLEEVSSLLSSNEKLVDENVEVFKEDFVEFFYAPSRYFRYRNRYRRFYPQYYNIRNQFVKRPRKTGANSKYPICSYEDTNFLGADINILNSLETDSAYECKFDCKATKNCKFWTFDEEARRGDNNCFLIESGTRRNNCKCLRRTDFIEVENEPDTDIGSDARRRRRRRRNRPKICPRGVKESDDIDYTYDDYEEFNENLKKKSQNSTMSGA 232
BLAST of EMLSAG00000005727 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold440_size170678-snap-gene-0.31 (protein:Tk09656 transcript:maker-scaffold440_size170678-snap-gene-0.31-mRNA-1 annotation:"coagulation factor xi-like") HSP 1 Score: 55.4546 bits (132), Expect = 2.445e-9 Identity = 32/92 (34.78%), Postives = 42/92 (45.65%), Query Frame = 0 Query: 89 NSKYPICSYEDTNFLGADINILNSLETDSAYECKFDCKATKNCKFWTFDEEARRGDNNCFL-----------------IESGTRRNNCKCLR 163 +S P CSY +T+F G D+ L T S Y CK C C+FWTF + R +C+L SG+R N+C CLR Sbjct: 205 DSLLPKCSYINTDFEGDDVGDGRGLTTGSPYSCKQACIDQNGCRFWTFRRDWAR---DCYLKRGEDAGRPNNVRRRAGFVSGSRSNDCSCLR 293 The following BLAST results are available for this feature:
BLAST of EMLSAG00000005727 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000005727 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000005727 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000005727 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000005727 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000005727 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000005727 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s309:715420..717244+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000005727-688493 ID=EMLSAG00000005727-688493|Name=EMLSAG00000005727|organism=Lepeophtheirus salmonis|type=gene|length=1825bp|location=Sequence derived from alignment at LSalAtl2s309:715420..717244+ (Lepeophtheirus salmonis)back to top Add to Basket
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