EMLSAG00000006490, EMLSAG00000006490-689256 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000006490 vs. L. salmonis peptides
Match: EMLSAP00000006490 (pep:novel supercontig:LSalAtl2s:LSalAtl2s355:2804:4923:-1 gene:EMLSAG00000006490 transcript:EMLSAT00000006490 description:"maker-LSalAtl2s355-augustus-gene-1.10") HSP 1 Score: 360.147 bits (923), Expect = 6.731e-128 Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0 Query: 1 MKHLLSFFLTVFTFGKGSESNDIQRPLLYYSPLDPQKMFLEDNDEYSTNKLINNGLNFPQLVTKFVLNPESEYFENKNELEGDSLLNVKQGLYKRSPFSVDFMGMRVSYPIYLRLTALQKKVIELDKIIRKMRKSNREEDLLKNPRWQTLLMYHKSLKKMLPVSYLRSIGEDYAVPLN 178 MKHLLSFFLTVFTFGKGSESNDIQRPLLYYSPLDPQKMFLEDNDEYSTNKLINNGLNFPQLVTKFVLNPESEYFENKNELEGDSLLNVKQGLYKRSPFSVDFMGMRVSYPIYLRLTALQKKVIELDKIIRKMRKSNREEDLLKNPRWQTLLMYHKSLKKMLPVSYLRSIGEDYAVPLN Sbjct: 1 MKHLLSFFLTVFTFGKGSESNDIQRPLLYYSPLDPQKMFLEDNDEYSTNKLINNGLNFPQLVTKFVLNPESEYFENKNELEGDSLLNVKQGLYKRSPFSVDFMGMRVSYPIYLRLTALQKKVIELDKIIRKMRKSNREEDLLKNPRWQTLLMYHKSLKKMLPVSYLRSIGEDYAVPLN 178
BLAST of EMLSAG00000006490 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold119_size336447-snap-gene-2.28 (protein:Tk11783 transcript:maker-scaffold119_size336447-snap-gene-2.28-mRNA-1 annotation:"hypothetical protein") HSP 1 Score: 77.411 bits (189), Expect = 6.664e-19 Identity = 37/72 (51.39%), Postives = 52/72 (72.22%), Query Frame = 0 Query: 94 KRSPFSVDFMGMRVSYPIYLRLTALQKKVIELDKIIRKMRKSNREEDLLKNPRWQTLLMYHKSLKKMLPVSY 165 KRS SV+FMGM VSYP Y+RL +Q++VI +DK+IR+MR++ +L +NP W L+ + +LK MLPV Y Sbjct: 57 KRS--SVEFMGMTVSYPQYIRLRNIQREVIRMDKVIRRMRQTRDPMELAQNPHWTELMELYDALKSMLPVDY 126
BLAST of EMLSAG00000006490 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold191_size271209-processed-gene-0.7 (protein:Tk06178 transcript:snap_masked-scaffold191_size271209-processed-gene-0.7-mRNA-1 annotation:"AGAP009693-PA") HSP 1 Score: 56.9954 bits (136), Expect = 3.386e-10 Identity = 29/81 (35.80%), Postives = 50/81 (61.73%), Query Frame = 0 Query: 98 FSVDFMGMRVSYPIYLRLTALQKKVIELDKIIRKMRKSNREEDLLKNPRWQTLLMYHKSLKKMLPVSYLRSIGEDYAVPLN 178 F+VDF GM+VSYP Y+RL+ LQ KV++L K+I+ + + E L P++ L+ ++SL+ +LP + + + P+ Sbjct: 584 FTVDFNGMQVSYPTYVRLSRLQAKVVKLQKMIQLLHRRYTPEQLDGLPQYGRLMELYESLRPLLPSNTFQELVPPEPTPIG 664 HSP 2 Score: 54.299 bits (129), Expect = 3.098e-9 Identity = 28/76 (36.84%), Postives = 47/76 (61.84%), Query Frame = 0 Query: 89 KQGLYKRSPFSVDFMGMRVSYPIYLRLTALQKKVIELDKIIRKMRKSNREEDLLKNPRWQTLLMYHKSLKKMLPVS 164 KQ ++ +F G++VSYP YL L +LQ+KV +LD ++ K+ E+L + P+W+ L +SL ++LP+S Sbjct: 826 KQMSAQKRGLVTEFNGVQVSYPQYLHLMSLQRKVRKLDSVMGKIASLRSPEELAQTPQWRKLKDLRQSLIRLLPLS 901 HSP 3 Score: 49.2914 bits (116), Expect = 1.460e-7 Identity = 27/74 (36.49%), Postives = 42/74 (56.76%), Query Frame = 0 Query: 92 LYKRSPFSVDFMGMRVSYPIYLRLTALQKKVIELDKIIRKMRKSNREEDLLKNPRWQTLLMYHKSLKKMLPVSY 165 L +R+ S F M VS P Y RL +QK ++LD ++RKM K + L +P+W L+ +SL+ +LP + Sbjct: 747 LGERAKRSTKFKNMYVSVPEYGRLMKMQKTALKLDSLLRKMVKDIGLDRLQADPKWNDLVQLRESLQTVLPEDH 820 The following BLAST results are available for this feature:
BLAST of EMLSAG00000006490 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000006490 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 0
BLAST of EMLSAG00000006490 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000006490 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000006490 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000006490 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000006490 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 2
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s355:2804..4923- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000006490-689256 ID=EMLSAG00000006490-689256|Name=EMLSAG00000006490|organism=Lepeophtheirus salmonis|type=gene|length=2120bp|location=Sequence derived from alignment at LSalAtl2s355:2804..4923- (Lepeophtheirus salmonis)back to top Add to Basket
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