EMLSAG00000006525, EMLSAG00000006525-689291 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000006525 vs. C. finmarchicus
Match: gi|592779266|gb|GAXK01175302.1| (TSA: Calanus finmarchicus comp3152_c0_seq1 transcribed RNA sequence) HSP 1 Score: 58.151 bits (139), Expect = 1.680e-8 Identity = 61/229 (26.64%), Postives = 105/229 (45.85%), Query Frame = 0 Query: 120 GRFLREEINEFAETLIERAIDFSRLV---FQKPYPSES---IQKLGIVWDLYDV--SFSSNNLEACIKILSREKDLIKDALDELLE-------NDEGD-----TETEELARSKGSGLVKSVWVLNKKLIESIGHAS--------TDIDDITSATLKLSEYVDDYVFSLYSASEEPDSVRESAETLNESANNILDKIHQ-NPERSSDFGSWGVFLKKAFSHNYTQIQNVI 319 G +R + E +T++E + F + + + +P+ S +Q G + +V + +N AC+ ++ + D++KDAL EL E +D GD TE + + G++K+ VL KK +I A + D I KLS VDD SLY + +++ +TL +S +L + + +S D W F+ KA HN+++IQ V Sbjct: 1188 GLAVRAALKEALKTVLESCLGFVQTMSETLGRKFPANSHPILQSFGQIMSKCEVIKNLPKSNKLACVVLIKDQYDILKDALSELEEVKNDAFVDDFGDCVEQWTENDHQIINPSMGMIKTSIVLVKKTSITIKKAGLEESSEQFLEYDTILGNINKLSALVDDLALSLYPPLNWSE-CKQANQTLKDSLEGVLLCLSSLHFMQSEDALKWRDFVGKAVIHNFSEIQRVF 1871
BLAST of EMLSAG00000006525 vs. C. finmarchicus
Match: gi|592779265|gb|GAXK01175303.1| (TSA: Calanus finmarchicus comp3152_c0_seq2 transcribed RNA sequence) HSP 1 Score: 51.2174 bits (121), Expect = 1.424e-6 Identity = 52/169 (30.77%), Postives = 80/169 (47.34%), Query Frame = 0 Query: 171 SNNLEACIKILSREKDLIKDALDELLE-------NDEGD-----TETEELARSKGSGLVKSVWVLNKKLIESIGHAS--------TDIDDITSATLKLSEYVDDYVFSLYSASEEPDSVRESAETLNESANNILDKIHQ-NPERSSDFGSWGVFLKKAFSHNYTQIQNV 318 SN L AC+ ++ + D++KDAL EL E +D GD TE + + G++K+ VL KK +I A + D I KLS VDD SLY + +++ +TL +S +L + + +S D W F+ KA HN+++IQ V Sbjct: 205 SNKL-ACVVLIKDQYDILKDALSELEEVKNDAFVDDFGDCVEQWTENDHQIINPSMGMIKTSIVLVKKTSITIKKAGLEESSEQFLEYDTILGNINKLSALVDDLALSLYPPLNWSE-CKQANQTLKDSLEGVLLCLSSLHFMQSEDALKWRDFVGKAVIHNFSEIQRV 705
BLAST of EMLSAG00000006525 vs. C. finmarchicus
Match: gi|592808882|gb|GAXK01145686.1| (TSA: Calanus finmarchicus comp1794398_c0_seq1 transcribed RNA sequence) HSP 1 Score: 31.9574 bits (71), Expect = 2.160e+0 Identity = 23/88 (26.14%), Postives = 44/88 (50.00%), Query Frame = 0 Query: 120 GRFLREEINEFAETLIERAIDFSRLV---FQKPYPSES---IQKLGIVWDLYD--VSFSSNNLEACIKILSREKDLIKDALDELLEND 199 G +R + E +T++E + F + + K +P S ++ G+V + + S +N AC+ ++ + ++KDAL EL ND Sbjct: 245 GLAVRAALKEALKTVLESCLGFVKTMSETLGKTFPVNSHPILKSFGLVMNKCEGIKSLPKSNKLACVVLMKDQYAILKDALSELEAND 508
BLAST of EMLSAG00000006525 vs. C. finmarchicus
Match: gi|592792744|gb|GAXK01161824.1| (TSA: Calanus finmarchicus comp34645_c0_seq1 transcribed RNA sequence) HSP 1 Score: 32.3426 bits (72), Expect = 3.251e+0 Identity = 19/54 (35.19%), Postives = 26/54 (48.15%), Query Frame = 0 Query: 3 SFISIQTTTNPWKLLTSPIT-----------CC-RRRFWNYHWIGKMPKAEXKL 44 SF S +++ W+LL + IT CC RR FW Y W +PK+ L Sbjct: 2057 SFCSFESSRLFWRLLIACITATDLSFTLRRCCCLRRSFWTYSWTKFIPKSMKNL 2218
BLAST of EMLSAG00000006525 vs. C. finmarchicus
Match: gi|592796398|gb|GAXK01158170.1| (TSA: Calanus finmarchicus comp66707_c6_seq4 transcribed RNA sequence) HSP 1 Score: 30.8018 bits (68), Expect = 6.695e+0 Identity = 23/59 (38.98%), Postives = 31/59 (52.54%), Query Frame = 0 Query: 47 NAARLIAHLNVIKASIKEEGNEAIGASQNYDVLVHNLNVLALRLSNGD--EDLSDTIEK 103 N +RL L K IK+ IGA YD+LVH N+ +L S+G + DTIE+ Sbjct: 51 NKSRLCKTLE--KVMIKDTSVTDIGA---YDLLVHGYNIESLEFSHGSFMKQFLDTIEQ 212
BLAST of EMLSAG00000006525 vs. C. finmarchicus
Match: gi|592796399|gb|GAXK01158169.1| (TSA: Calanus finmarchicus comp66707_c6_seq3 transcribed RNA sequence) HSP 1 Score: 30.8018 bits (68), Expect = 6.761e+0 Identity = 23/59 (38.98%), Postives = 31/59 (52.54%), Query Frame = 0 Query: 47 NAARLIAHLNVIKASIKEEGNEAIGASQNYDVLVHNLNVLALRLSNGD--EDLSDTIEK 103 N +RL L K IK+ IGA YD+LVH N+ +L S+G + DTIE+ Sbjct: 51 NKSRLCKTLE--KVMIKDTSVTDIGA---YDLLVHGYNIESLEFSHGSFMKQFLDTIEQ 212
BLAST of EMLSAG00000006525 vs. C. finmarchicus
Match: gi|592796400|gb|GAXK01158168.1| (TSA: Calanus finmarchicus comp66707_c6_seq2 transcribed RNA sequence) HSP 1 Score: 30.4166 bits (67), Expect = 8.832e+0 Identity = 22/59 (37.29%), Postives = 31/59 (52.54%), Query Frame = 0 Query: 47 NAARLIAHLNVIKASIKEEGNEAIGASQNYDVLVHNLNVLALRLSNGD--EDLSDTIEK 103 N +RL L K IK+ +GA YD+LVH N+ +L S+G + DTIE+ Sbjct: 510 NKSRLCKTLE--KVMIKDTSVTDVGA---YDLLVHGYNIESLEFSHGSFMKQFLDTIEQ 671
BLAST of EMLSAG00000006525 vs. C. finmarchicus
Match: gi|592796401|gb|GAXK01158167.1| (TSA: Calanus finmarchicus comp66707_c6_seq1 transcribed RNA sequence) HSP 1 Score: 30.4166 bits (67), Expect = 8.864e+0 Identity = 22/59 (37.29%), Postives = 31/59 (52.54%), Query Frame = 0 Query: 47 NAARLIAHLNVIKASIKEEGNEAIGASQNYDVLVHNLNVLALRLSNGD--EDLSDTIEK 103 N +RL L K IK+ +GA YD+LVH N+ +L S+G + DTIE+ Sbjct: 510 NKSRLCKTLE--KVMIKDTSVTDVGA---YDLLVHGYNIESLEFSHGSFMKQFLDTIEQ 671
BLAST of EMLSAG00000006525 vs. L. salmonis peptides
Match: EMLSAP00000006525 (pep:novel supercontig:LSalAtl2s:LSalAtl2s357:395548:396760:1 gene:EMLSAG00000006525 transcript:EMLSAT00000006525 description:"maker-LSalAtl2s357-augustus-gene-4.13") HSP 1 Score: 669.078 bits (1725), Expect = 0.000e+0 Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 0 Query: 1 APSFISIQTTTNPWKLLTSPITCCRRRFWNYHWIGKMPKAEXKLDGNAARLIAHLNVIKASIKEEGNEAIGASQNYDVLVHNLNVLALRLSNGDEDLSDTIEKIIRFASSLVVSGSIIEGRFLREEINEFAETLIERAIDFSRLVFQKPYPSESIQKLGIVWDLYDVSFSSNNLEACIKILSREKDLIKDALDELLENDEGDTETEELARSKGSGLVKSVWVLNKKLIESIGHASTDIDDITSATLKLSEYVDDYVFSLYSASEEPDSVRESAETLNESANNILDKIHQNPERSSDFGSWGVFLKKAFSHNYTQIQNVINEIDMNKKLKL 330 APSFISIQTTTNPWKLLTSPITCCRRRFWNYHWIGKMPKAEXKLDGNAARLIAHLNVIKASIKEEGNEAIGASQNYDVLVHNLNVLALRLSNGDEDLSDTIEKIIRFASSLVVSGSIIEGRFLREEINEFAETLIERAIDFSRLVFQKPYPSESIQKLGIVWDLYDVSFSSNNLEACIKILSREKDLIKDALDELLENDEGDTETEELARSKGSGLVKSVWVLNKKLIESIGHASTDIDDITSATLKLSEYVDDYVFSLYSASEEPDSVRESAETLNESANNILDKIHQNPERSSDFGSWGVFLKKAFSHNYTQIQNVINEIDMNKKLKL Sbjct: 1 APSFISIQTTTNPWKLLTSPITCCRRRFWNYHWIGKMPKAEXKLDGNAARLIAHLNVIKASIKEEGNEAIGASQNYDVLVHNLNVLALRLSNGDEDLSDTIEKIIRFASSLVVSGSIIEGRFLREEINEFAETLIERAIDFSRLVFQKPYPSESIQKLGIVWDLYDVSFSSNNLEACIKILSREKDLIKDALDELLENDEGDTETEELARSKGSGLVKSVWVLNKKLIESIGHASTDIDDITSATLKLSEYVDDYVFSLYSASEEPDSVRESAETLNESANNILDKIHQNPERSSDFGSWGVFLKKAFSHNYTQIQNVINEIDMNKKLKL 330
BLAST of EMLSAG00000006525 vs. Select Arthropod Genomes
Match: gb|KFM80555.1| (Cyclin-D1-binding protein 1-like protein, partial [Stegodyphus mimosarum]) HSP 1 Score: 58.5362 bits (140), Expect = 8.193e-9 Identity = 56/236 (23.73%), Postives = 98/236 (41.53%), Query Frame = 0 Query: 119 EGRFLREEINEFAETLIERAIDFSRLVFQKPYPSESIQKLGIVWDLYDV--SFSSNNLEACIKILSREKDLIKDALDELLENDEGDTETEELARS-------------------------KGSGLVKSVWVLNKKLIESIGHAS--------TDIDDITSATLKLSEYVDDYVFSLYSASEEPDSVRESAETLNESANNILDKIHQNPERSSDFGSWGVFLKKAFSHNYTQIQNVI 319 +GR L +EI +A ++ D K +Q +G VW+ + + +N +A + + E D+++DA ELL+ E + E +L S SGLVK+ KK + +I +++D I S VDD+V SLY +VR A + ++ ++L + + S +W FL+KA HN+ +I +++ Sbjct: 100 KGRTLHKEIRLYALYVLRAIKDLC--TAAKNQSRRQLQNVGNVWEKCEAVENLPKDNRDAVLALCQEEHDMVQDASQELLDAYENEDEMPDLEFSLVTPRNGIRIPPVRTWTDSDRNVILPCSGLVKATKACIKKTLHAISERGDGNDERSISELDGIAEIVRSSSALVDDFVLSLYPPVNH-SAVRHQASLVRTNSKDLLTYVGNSHFFSEADAAWIEFLRKAIDHNWVKINDMV 332
BLAST of EMLSAG00000006525 vs. nr
Match: gi|290561100|gb|ADD37952.1| (Cyclin-D1-binding protein 1 homolog [Lepeophtheirus salmonis]) HSP 1 Score: 581.252 bits (1497), Expect = 0.000e+0 Identity = 291/294 (98.98%), Postives = 292/294 (99.32%), Query Frame = 0 Query: 37 MPKAEXKLDGNAARLIAHLNVIKASIKEEGNEAIGASQNYDVLVHNLNVLALRLSNGDEDLSDTIEKIIRFASSLVVSGSIIEGRFLREEINEFAETLIERAIDFSRLVFQKPYPSESIQKLGIVWDLYDVSFSSNNLEACIKILSREKDLIKDALDELLENDEGDTETEELARSKGSGLVKSVWVLNKKLIESIGHASTDIDDITSATLKLSEYVDDYVFSLYSASEEPDSVRESAETLNESANNILDKIHQNPERSSDFGSWGVFLKKAFSHNYTQIQNVINEIDMNKKLKL 330 MPKAE KLDGNAARLIAHLNVIKASIKEEGNEAIGASQNYDVLVHNLNVLALRLSNGDEDLSDTIEKIIRFASSLVVSGSIIEGRFLREEINEFAETLIERAIDFSRLVFQKPYPSESIQKLGIVWDLYDVSFSSNNLEACIKILSREKDLIKDALDELLENDEGDTETEELARSKGSGLVKSVWVLNKKLIESIGHASTDIDDITSA+LKLSEYVDDYVFSLYSASEEPDSVRESAE LNESANNILDKIHQNPERSSDFGSWGVFLKKAFSHNYTQIQNVINEIDMNKKLKL Sbjct: 1 MPKAEVKLDGNAARLIAHLNVIKASIKEEGNEAIGASQNYDVLVHNLNVLALRLSNGDEDLSDTIEKIIRFASSLVVSGSIIEGRFLREEINEFAETLIERAIDFSRLVFQKPYPSESIQKLGIVWDLYDVSFSSNNLEACIKILSREKDLIKDALDELLENDEGDTETEELARSKGSGLVKSVWVLNKKLIESIGHASTDIDDITSASLKLSEYVDDYVFSLYSASEEPDSVRESAEILNESANNILDKIHQNPERSSDFGSWGVFLKKAFSHNYTQIQNVINEIDMNKKLKL 294
BLAST of EMLSAG00000006525 vs. nr
Match: gi|676450551|ref|XP_009052415.1| (hypothetical protein LOTGIDRAFT_214465 [Lottia gigantea] >gi|556108270|gb|ESO96922.1| hypothetical protein LOTGIDRAFT_214465 [Lottia gigantea]) HSP 1 Score: 65.855 bits (159), Expect = 1.144e-8 Identity = 77/263 (29.28%), Postives = 118/263 (44.87%), Query Frame = 0 Query: 95 EDLSDTIEKIIRFASSLVVSGSIIEGRFLREEINEFAETLIERAIDFSRLVFQKPYPSESIQKLGIVWDLYDV--SFSSNNLEACIKILSREKDLIKDALDELLE-----------NDEGD-----------TETEELARSKGSGLVKSVWVLNKK---LIESIGHASTD-----IDDITSATLKLSEYVDDYVFSLYSASEEPDSVRESAETLNESANNILDKIHQNPERSSDFGSWGVFLKKAFSHNYTQIQNVINEIDMN 325 E L IEK I S S +G LR+E++ ++ER + +V K SE +Q G+VW+ D +N EA + I+ + DL+KDAL E+ + ND D +E+++ S G GL+K+V KK +I++ G+ + + +DDI KLS VD+ LY P SV+ + L+ S ++IL + + SS W FL KA HN +I + D N Sbjct: 37 ETLVSGIEKSILAMVSYYYSLPKSQGLTLRKELHTKVIQVVERVQNLVEIV-SKYSGSERLQSTGLVWEETDDFDDLPKDNREAALFIIEQTTDLVKDALQEIEQALELGGEDDYLNDILDANEPRNNADEWSESDKTVISTGMGLIKTVKSTLKKTRDVIKTNGNCNCENNISQLDDICDYVKKLSCIVDEMTIVLYPPIVIP-SVQTKVDLLDSSISSILQILKNSHVTSSGDEKWIEFLYKAKQHNLDKITEALTMNDHN 297 The following BLAST results are available for this feature:
BLAST of EMLSAG00000006525 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000006525 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 8
BLAST of EMLSAG00000006525 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000006525 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000006525 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 1
BLAST of EMLSAG00000006525 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 2
BLAST of EMLSAG00000006525 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s357:395548..396760+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000006525-689291 ID=EMLSAG00000006525-689291|Name=EMLSAG00000006525|organism=Lepeophtheirus salmonis|type=gene|length=1213bp|location=Sequence derived from alignment at LSalAtl2s357:395548..396760+ (Lepeophtheirus salmonis)back to top Add to Basket
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