EMLSAG00000006966, EMLSAG00000006966-689732 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000006966 vs. L. salmonis peptides
Match: EMLSAP00000006966 (pep:novel supercontig:LSalAtl2s:LSalAtl2s3965:4049:4449:-1 gene:EMLSAG00000006966 transcript:EMLSAT00000006966 description:"maker-LSalAtl2s3965-snap-gene-0.3") HSP 1 Score: 172.555 bits (436), Expect = 7.617e-57 Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 Query: 1 MNTRMRIRSSKNKLAFVQIGFSAAEDSSQLIHQQMNESDQSFXIDSSIISTGLQSSGLGNQVKSLVHVQFIKLRRITLVMLIKVLYQN 88 MNTRMRIRSSKNKLAFVQIGFSAAEDSSQLIHQQMNESDQSFXIDSSIISTGLQSSGLGNQVKSLVHVQFIKLRRITLVMLIKVLYQN Sbjct: 1 MNTRMRIRSSKNKLAFVQIGFSAAEDSSQLIHQQMNESDQSFXIDSSIISTGLQSSGLGNQVKSLVHVQFIKLRRITLVMLIKVLYQN 88
BLAST of EMLSAG00000006966 vs. L. salmonis peptides
Match: EMLSAP00000000301 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1044:3402:4048:-1 gene:EMLSAG00000000301 transcript:EMLSAT00000000301 description:"snap_masked-LSalAtl2s1044-processed-gene-0.17") HSP 1 Score: 63.5438 bits (153), Expect = 4.687e-14 Identity = 34/47 (72.34%), Postives = 36/47 (76.60%), Query Frame = 0 Query: 12 NKLAFVQIGF----SAAEDSSQLIHQQMNESDQSFXIDSSIISTGLQ 54 NK Q+G AAEDSSQLIHQQMN+SDQSF IDSSIISTGLQ Sbjct: 49 NKELQKQVGICSNRDAAEDSSQLIHQQMNKSDQSFKIDSSIISTGLQ 95
BLAST of EMLSAG00000006966 vs. L. salmonis peptides
Match: EMLSAP00000006390 (pep:novel supercontig:LSalAtl2s:LSalAtl2s350:207605:212969:1 gene:EMLSAG00000006390 transcript:EMLSAT00000006390 description:"maker-LSalAtl2s350-augustus-gene-2.6") HSP 1 Score: 60.8474 bits (146), Expect = 5.084e-12 Identity = 31/50 (62.00%), Postives = 37/50 (74.00%), Query Frame = 0 Query: 12 NKLAFVQIGFSA----AEDSSQLIHQQMNESDQSFXIDSSIISTGLQSSG 57 NK Q+G + A+DSSQL+HQQMNESDQSF IDSSI+ T LQ+SG Sbjct: 1026 NKELQKQVGICSNRDTADDSSQLVHQQMNESDQSFKIDSSILPTELQASG 1075
BLAST of EMLSAG00000006966 vs. L. salmonis peptides
Match: EMLSAP00000006410 (pep:novel supercontig:LSalAtl2s:LSalAtl2s350:759416:762862:1 gene:EMLSAG00000006410 transcript:EMLSAT00000006410 description:"maker-LSalAtl2s350-augustus-gene-6.33") HSP 1 Score: 55.4546 bits (132), Expect = 2.235e-11 Identity = 30/43 (69.77%), Postives = 36/43 (83.72%), Query Frame = 0 Query: 24 AEDSSQLIHQQMNESDQSFXIDSSIISTGLQSSGLGNQVKSLV 66 A+DSSQL++QQMN+SDQSF IDSSI S GLQ SG N++KS V Sbjct: 71 ADDSSQLVYQQMNKSDQSFKIDSSIQSAGLQISG-KNKMKSKV 112 The following BLAST results are available for this feature:
BLAST of EMLSAG00000006966 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000006966 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 0
BLAST of EMLSAG00000006966 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 4
BLAST of EMLSAG00000006966 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000006966 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000006966 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000006966 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s3965:4049..4449- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000006966-689732 ID=EMLSAG00000006966-689732|Name=EMLSAG00000006966|organism=Lepeophtheirus salmonis|type=gene|length=401bp|location=Sequence derived from alignment at LSalAtl2s3965:4049..4449- (Lepeophtheirus salmonis)back to top Add to Basket
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