EMLSAG00000007312, EMLSAG00000007312-690078 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000007312 vs. C. finmarchicus
Match: gi|592783050|gb|GAXK01171518.1| (TSA: Calanus finmarchicus comp63896_c1_seq1 transcribed RNA sequence) HSP 1 Score: 70.4774 bits (171), Expect = 6.710e-13 Identity = 56/203 (27.59%), Postives = 98/203 (48.28%), Query Frame = 0 Query: 97 CELKISNPNYLDSGEWECYVSGGAESNFIRGT----TEIFVSRRAELYISEPDMETNSNQYIVLDM-XSSRPKLYAKCRAYHAIPYPQFRWYVNEVNPRSEIKGQDAQISLRPPRTDSRGQYTEGSLDWGPKDLCQNYNIEADLCKKEEFEFDLLCIIDQAEYYMAENEDNVQRVTTRVIGNSSRRIIA-SGIMILVVSCFVA 293 C L I +P+ D+G W+C+V+ ++N GT ++FV+ + + I++PDM N+ I +D+ SSR + A+C A + IP P WY++E P + + G Q S + SLD ++ Y + F F L C DQ +Y+ + +D V G S +I++ S +++ +VS ++ Sbjct: 506 CGLTIQSPHANDTGIWKCHVN---DNNPDVGTQWREVDLFVANESVVAITDPDMYGNTGVSIEVDLSTSSRVDVDAECTAEYGIPPPDIIWYIDE--PTNTVDGSSDQTEQSDGTVVSSIRL---SLD---QNSLSRYGVRQ---TNNYFSFALGCYPDQGDYFDSNRDDIKNPAEVLVFGTSGAQILSTSAVIVTLVSLILS 1072
BLAST of EMLSAG00000007312 vs. C. finmarchicus
Match: gi|592767987|gb|GAXK01186581.1| (TSA: Calanus finmarchicus comp45940_c3_seq1 transcribed RNA sequence) HSP 1 Score: 49.2914 bits (116), Expect = 9.261e-6 Identity = 61/244 (25.00%), Postives = 100/244 (40.98%), Query Frame = 0 Query: 64 CSIIQG-TASNTCDPENVDTDYKRRIKIEAKSSSCELKISNPNYLDSGEWECYVS--GGAESNFIRGTTEIFVSRRAELYISEP--DMETNSNQYIVL----------DMXSSRPKLYAKCRAYHAIPYPQFRWYV-----NEVNPRSEIKGQDAQISLRPPRTDSRGQYTEGSLDWGP---KDLCQNYNIEADLCKKEEFEFDLLCIIDQAEYYMAENEDNVQRVTTRVIGNSSRRIIASGIM 284 C+I G T S C P++ RI + + +SC ++ISNP D+G+W V G + EI+ + E+ + E + E SN I D S ++ C A + P P+ W + NE++ + +D + P + +E S D L + I+ + + EF DL C+++Q E N +RV+TRV + RR+ S M Sbjct: 1237 CNIAGGDTQSKNC-PDDT------RITMTSSLTSCGIRISNPTPEDTGKWTLIVGEVKGTQVQSSSKIIEIYTYNQTEVILQEKRSEDEIPSNYEIWYNYDERRDQWRDGTSGYERVELACNAMYGRPVPEILWTINRDDRNELHSENTFTIRDGSGTTHDPSGYVKDWVSELSFDVNENFMNYLADTHGIDTNP-ESGEFTIDLDCVVEQG----TNGEYNSERVSTRV---TVRRVYNSNAM 1923
BLAST of EMLSAG00000007312 vs. C. finmarchicus
Match: gi|592914828|gb|GAXK01043547.1| (TSA: Calanus finmarchicus comp50483_c0_seq1 transcribed RNA sequence) HSP 1 Score: 43.1282 bits (100), Expect = 2.956e-4 Identity = 32/118 (27.12%), Postives = 52/118 (44.07%), Query Frame = 0 Query: 4 FIAVLLPFHILLN-PLPI--HAVNIQST--GDEAVLRCEISGTWDTCRWKHTFVKENTDTQSLFYCSIIQGTASNTCDPENVDTDYKRRIKIEA--KSSSCELKISNPNYLDSGEWEC 114 +++ + FH+ ++ P I H+ + QS G L C+ +W+ C WKHT N + + + C + A + D RI I S C L I++ D+G WEC Sbjct: 100 IVSLFILFHLHISLPFEILSHSQSAQSMEPGQTMHLVCKSDNSWEFCLWKHT----NMEKEVVRDCLMEWKRAKGGVSVQKCDDSLTDRISISGDYDSHECGLTITSLQLEDAGNWEC 441
BLAST of EMLSAG00000007312 vs. C. finmarchicus
Match: gi|592932865|gb|GAXK01025688.1| (TSA: Calanus finmarchicus comp2148746_c0_seq1 transcribed RNA sequence) HSP 1 Score: 42.743 bits (99), Expect = 9.788e-4 Identity = 46/200 (23.00%), Postives = 80/200 (40.00%), Query Frame = 0 Query: 29 GDEAVLRCEISGTWDTCRWKH-TFVKENTDTQSLFYCSIIQ-GTASNTCDPENVDTDYKRRIKIEAKSSSCELKISNPNYLDSGEWECYVSGGAESNFIRGTTEIFVSRRAELYISEPDMETNSNQYIVLDMXSSRPKLYAKCRAYHAIPYPQFRWYVNEVNPRSEIKGQDAQISLRPPRTDSRGQYTEGSLDWGPKDLC 226 G A + C W C W+H + VKE CSI + GT N C + D+ ++I C LK+ N + D G + C ++ + R ++ V+ +A+L + + S +L++ + +C A P QF+W V+ + + + R+ S +YT +D G C Sbjct: 464 GGVANISCTTDHEWFFCLWQHPSGVKE---------CSIQENGTYQNAC----IGMDH---MEIYGSEKFCSLKVENVSVRDHGTFMCLLNQADVFHTDRQFVKLEVATQAQLQFKKDKSDITS----ILELVEGEI-VDLECEGRRAYPASQFKWEVSGTELVLSTEDHEPEYGSHTFRSTSTIKYTADVVDDGSTIKC 1000
BLAST of EMLSAG00000007312 vs. C. finmarchicus
Match: gi|592750188|gb|GAXK01204225.1| (TSA: Calanus finmarchicus comp410769_c0_seq2 transcribed RNA sequence) HSP 1 Score: 42.3578 bits (98), Expect = 1.249e-3 Identity = 42/179 (23.46%), Postives = 66/179 (36.87%), Query Frame = 0 Query: 7 VLLPFHILLNPLPIHAVNIQSTGDEAVLRCEISGTWDTCRWKHTFVKENTDTQSLFYCSIIQGTASNTCDPENVDTDYKRRIKIEAKSSSCELKISNPNYLDSGEWECYVSGGAESNFIRGTTEIFVSRRAELYISEPDMETNSNQYIVLDMXSSRPKLYAKCRAYHAIPYPQFRWYVN 185 VL +L + H V+ S+ E L C + W C W E D G N+ E + R+++ SS C L I NP D GEW C VS + ++ ++ + E+ + PD +++M K+ C P P+ W V+ Sbjct: 582 VLAVVFLLFDQSAAH-VHFMSSTKEVSLSCTSTSPWFFCVW------EGPDGDRACALREKMGEQGNSLCGE------QGRLEVRGNSSICTLVIHNPQLSDHGEWTCAVSDDSSLETVKDYIQLDMVVEGEMVLL-PD-------TTMIEMVEGE-KVELVCMVEDVYPTPEISWSVS 1052
BLAST of EMLSAG00000007312 vs. C. finmarchicus
Match: gi|592932864|gb|GAXK01025689.1| (TSA: Calanus finmarchicus comp2148746_c0_seq2 transcribed RNA sequence) HSP 1 Score: 41.9726 bits (97), Expect = 1.474e-3 Identity = 46/200 (23.00%), Postives = 80/200 (40.00%), Query Frame = 0 Query: 29 GDEAVLRCEISGTWDTCRWKH-TFVKENTDTQSLFYCSIIQ-GTASNTCDPENVDTDYKRRIKIEAKSSSCELKISNPNYLDSGEWECYVSGGAESNFIRGTTEIFVSRRAELYISEPDMETNSNQYIVLDMXSSRPKLYAKCRAYHAIPYPQFRWYVNEVNPRSEIKGQDAQISLRPPRTDSRGQYTEGSLDWGPKDLC 226 G A + C W C W+H + VKE CSI + GT N C + D+ ++I C LK+ N + D G + C ++ + R ++ V+ +A+L + + S +L++ + +C A P QF+W V+ + + + R+ S +YT +D G C Sbjct: 354 GGVANISCTTDHEWFFCLWQHPSGVKE---------CSIQENGTYQNAC----IGMDH---MEIYGSEKFCSLKVENVSVRDHGTFMCLLNQADVFHTDRQFVKLEVASKAQLALRKGKSGIKS----ILELVEGEI-VDLECEGRRAYPASQFKWEVSGTELVLSTEDHEPEYGSHTFRSTSTIKYTADVVDDGSTIKC 890
BLAST of EMLSAG00000007312 vs. C. finmarchicus
Match: gi|592750189|gb|GAXK01204224.1| (TSA: Calanus finmarchicus comp410769_c0_seq1 transcribed RNA sequence) HSP 1 Score: 41.9726 bits (97), Expect = 1.676e-3 Identity = 42/179 (23.46%), Postives = 66/179 (36.87%), Query Frame = 0 Query: 7 VLLPFHILLNPLPIHAVNIQSTGDEAVLRCEISGTWDTCRWKHTFVKENTDTQSLFYCSIIQGTASNTCDPENVDTDYKRRIKIEAKSSSCELKISNPNYLDSGEWECYVSGGAESNFIRGTTEIFVSRRAELYISEPDMETNSNQYIVLDMXSSRPKLYAKCRAYHAIPYPQFRWYVN 185 VL +L + H V+ S+ E L C + W C W E D G N+ E + R+++ SS C L I NP D GEW C VS + ++ ++ + E+ + PD +++M K+ C P P+ W V+ Sbjct: 600 VLAVVFLLFDQSAAH-VHFMSSTKEVSLSCTSTSPWFFCVW------EGPDGDRACALREKMGEQGNSLCGE------QGRLEVRGNSSICTLVIHNPQLSDHGEWTCAVSDDSSLETVKDYIQLDMVVEGEMVLL-PD-------TTMIEMVEGE-KVELVCMVEDVYPTPEISWSVS 1070
BLAST of EMLSAG00000007312 vs. C. finmarchicus
Match: gi|592804928|gb|GAXK01149640.1| (TSA: Calanus finmarchicus comp1082103_c0_seq1 transcribed RNA sequence) HSP 1 Score: 40.4318 bits (93), Expect = 6.218e-3 Identity = 38/168 (22.62%), Postives = 58/168 (34.52%), Query Frame = 0 Query: 29 GDEAVLRCEISGTWDTCRWKHTFVKENTDTQSLFYCSIIQG--TASNTC--DPENVDTDYKRRIKIEAKSSSCELKISNPNYLDSGEWECYVSGGAESNFIRGTTEIFVSRRAELYISEPDMETNSNQYIVLDMXSSRPKLYAKCRAYHAIPYPQFRWYVNEVNPRSE 192 G C+ W C W + C+I + AS C DP RI ++ S +C + ++N D G W C V G E R ++ V+R + + + +N + + CR+ A P P F W P SE Sbjct: 1345 GGTVSFLCQTDQRWFLCLWNSPLGNK--------VCAIQESDEGASQVCQGDP---------RILVQGDSINCGITVTNVTRDDWGAWMCLVQDGEEFKTDRREIDMEVARMGTVGLEFDEWTSNRTYSQRVLRITEGTATNISCRSLDAYPRPSFSWSGTPDGPVSE 1797
BLAST of EMLSAG00000007312 vs. C. finmarchicus
Match: gi|592914827|gb|GAXK01043548.1| (TSA: Calanus finmarchicus comp50483_c0_seq2 transcribed RNA sequence) HSP 1 Score: 38.5058 bits (88), Expect = 8.205e-3 Identity = 25/88 (28.41%), Postives = 34/88 (38.64%), Query Frame = 0 Query: 29 GDEAVLRCEISGTWDTCRWKHTFVKENTDTQSLFYCSIIQGTASNTCDPENVDTDYKRRIKIEA--KSSSCELKISNPNYLDSGEWEC 114 G L C W+ C WKHT N + + + C + A + D RI I S C L I++ D+G WEC Sbjct: 123 GQTLSLTCRADSAWEFCLWKHT----NMEKEVVRDCLMEWKRAKGGVSVQKCDDSLTDRISISGDYDSHECGLTITSLQLEDAGNWEC 374
BLAST of EMLSAG00000007312 vs. C. finmarchicus
Match: gi|592837220|gb|GAXK01120324.1| (TSA: Calanus finmarchicus comp986163_c0_seq1 transcribed RNA sequence) HSP 1 Score: 38.1206 bits (87), Expect = 2.863e-2 Identity = 28/101 (27.72%), Postives = 35/101 (34.65%), Query Frame = 0 Query: 87 RIKIEAKSSSCELKISNPNYLDSGEWECYVSGGAESNFIRG--TTEIFVSRRAELYISEPDMETNSNQYIVLDMXSSRPKLYAKCRAYHAIPYPQFRWYVN 185 R+KI+ SSSC L I P D G W C VS I+ +I V L S +E L C+ P P W V+ Sbjct: 547 RMKIKGNSSSCSLVIDTPTLSDHGVWTCAVSDDRSLETIKDYRNLDIVVEGEVSLNPSHAILELGEGDMADL-----------LCKVEKGFPKPDISWGVD 816
BLAST of EMLSAG00000007312 vs. L. salmonis peptides
Match: EMLSAP00000007312 (pep:novel supercontig:LSalAtl2s:LSalAtl2s410:645031:652161:1 gene:EMLSAG00000007312 transcript:EMLSAT00000007312 description:"snap_masked-LSalAtl2s410-processed-gene-6.19") HSP 1 Score: 615.15 bits (1585), Expect = 0.000e+0 Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0 Query: 1 MWGFIAVLLPFHILLNPLPIHAVNIQSTGDEAVLRCEISGTWDTCRWKHTFVKENTDTQSLFYCSIIQGTASNTCDPENVDTDYKRRIKIEAKSSSCELKISNPNYLDSGEWECYVSGGAESNFIRGTTEIFVSRRAELYISEPDMETNSNQYIVLDMXSSRPKLYAKCRAYHAIPYPQFRWYVNEVNPRSEIKGQDAQISLRPPRTDSRGQYTEGSLDWGPKDLCQNYNIEADLCKKEEFEFDLLCIIDQAEYYMAENEDNVQRVTTRVIGNSSRRIIASGIMILVVSCFVAFF 295 MWGFIAVLLPFHILLNPLPIHAVNIQSTGDEAVLRCEISGTWDTCRWKHTFVKENTDTQSLFYCSIIQGTASNTCDPENVDTDYKRRIKIEAKSSSCELKISNPNYLDSGEWECYVSGGAESNFIRGTTEIFVSRRAELYISEPDMETNSNQYIVLDMXSSRPKLYAKCRAYHAIPYPQFRWYVNEVNPRSEIKGQDAQISLRPPRTDSRGQYTEGSLDWGPKDLCQNYNIEADLCKKEEFEFDLLCIIDQAEYYMAENEDNVQRVTTRVIGNSSRRIIASGIMILVVSCFVAFF Sbjct: 1 MWGFIAVLLPFHILLNPLPIHAVNIQSTGDEAVLRCEISGTWDTCRWKHTFVKENTDTQSLFYCSIIQGTASNTCDPENVDTDYKRRIKIEAKSSSCELKISNPNYLDSGEWECYVSGGAESNFIRGTTEIFVSRRAELYISEPDMETNSNQYIVLDMXSSRPKLYAKCRAYHAIPYPQFRWYVNEVNPRSEIKGQDAQISLRPPRTDSRGQYTEGSLDWGPKDLCQNYNIEADLCKKEEFEFDLLCIIDQAEYYMAENEDNVQRVTTRVIGNSSRRIIASGIMILVVSCFVAFF 295
BLAST of EMLSAG00000007312 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1185_size56580-snap-gene-0.13 (protein:Tk10351 transcript:maker-scaffold1185_size56580-snap-gene-0.13-mRNA-1 annotation:"amidohydrolase") HSP 1 Score: 70.4774 bits (171), Expect = 1.041e-14 Identity = 44/162 (27.16%), Postives = 79/162 (48.77%), Query Frame = 0 Query: 34 LRCEIS----GTWDTCRWKHTFVKENTDTQSLFYCSIIQGT--ASNTCDPENVDT---DYKRRIKIEAKSSSCELKISNPNYLDSGEWECYVS-----GGAESNFIRGTTEIFVSRRAELYISEPDMETNSNQYIVLDMXSSRPKLYAKCRAYHAIPYPQFR 181 L+C+I W C W HT ++ TD+ + ++ + +N C + + Y RI + +SC + + D G+WEC+V+ GG S+++ +I V+ + ++I+EP +E +S+ I D+ +R ++ A CR Y P P FR Sbjct: 46 LKCDIQLQSEEAWLLCMWTHT-IEGRTDSNGMDLKAVCSTSPDGNNQCTNKGGSSQLDSYASRITMMTSPNSCGINVRGAVGEDDGQWECHVTDASTGGGQVSSYL----DIHVANQTTIFITEPRIEQDSSLTIEYDLEETRSEIEATCRGYGGKPKPTFR 202
BLAST of EMLSAG00000007312 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1185_size56580-snap-gene-0.16 (protein:Tk10355 transcript:maker-scaffold1185_size56580-snap-gene-0.16-mRNA-1 annotation:"multidrug abc transporter atp-binding protein") HSP 1 Score: 50.447 bits (119), Expect = 1.445e-7 Identity = 32/120 (26.67%), Postives = 60/120 (50.00%), Query Frame = 0 Query: 183 YVNEVNPRSEIKGQDAQISLRPPRTDSRGQYTEGSLDWGP--KDLCQNYNIEADLC-----KKEEFEFDLLCIIDQAEYYMAENEDNVQRVTTRVIGNSSRRIIASGIMILVVSCFVAFF 295 Y+N + R+EI +R + + G+Y E + + P +D C Y+I+ C K F F+L+C ++Q Y+ ENED V V+ SS ++ + ++++++ F+A Sbjct: 126 YIN--DDRNEIPETAMTKRIRSSKDNLLGEYDEERISFQPTLEDFCTRYDIDEYACETSKTKYHYFNFNLICKVEQEGYFQRENEDQEAVVQVDVVSGSSIQVAS---LVMILTSFLAML 240
BLAST of EMLSAG00000007312 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold368_size193847-snap-gene-0.34 (protein:Tk09999 transcript:maker-scaffold368_size193847-snap-gene-0.34-mRNA-1 annotation:"PREDICTED: fasciclin-3-like") HSP 1 Score: 48.9062 bits (115), Expect = 9.769e-7 Identity = 59/267 (22.10%), Postives = 104/267 (38.95%), Query Frame = 0 Query: 19 PIHAVNIQSTGDEAV-LRCEISGTWDTCRWKHT---FVKENTDTQSLFYCSIIQGTASNTCDPENVDTDYKRRIKIEAKSSSCELKISNPNYLDSGEWECYVSGGAESNFIRGTT---EIFVSRRAEL-YISEPDMETNSNQYIVLDMXSSRPKLYAK-----------CRAYHAIPYPQFRWYVNEVNPRSEIKGQDAQISLRPPRTDSRGQY-------TEGSLDWGPKDLCQNYNIEADLCKKEEFEFDLLCIIDQAEYYMAEN 259 P + VN+ E V L C ++C W H V ++ Q CS G +C + R++ + + C ++IS +D+G W+ G S ++ + E+F ++ + + E + + S+ Y V + R + + C+AY P P F+WY+ + + QI+ D + QY E +D D+ + +IE + + E F L C I+QA EN Sbjct: 62 PDNNVNLAVPERETVTLECSFDAEVESCVWVHDEPLNVGTHSAGQYDIKCSAGPGENGQSCKALS-------RVQYIFQGNRCGIRISTTEPVDTGRWKLSAIGLTSSGGVQTASRDFELFTFNQSTIGMVDEDENDILSDTYEVHYNFNERENDWEEGKNNWEVVTFYCQAYGGRPEPTFKWYIENNDNDDLVNEPHFQINTNLMSVDDKDQYIRNLESKIEFQIDTELMDILERSSIEVN-SQDERVSFRLTCEIEQASNSFVEN 320 The following BLAST results are available for this feature:
BLAST of EMLSAG00000007312 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000007312 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000007312 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000007312 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000007312 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000007312 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000007312 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 3
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s410:645031..652161+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000007312-690078 ID=EMLSAG00000007312-690078|Name=EMLSAG00000007312|organism=Lepeophtheirus salmonis|type=gene|length=7131bp|location=Sequence derived from alignment at LSalAtl2s410:645031..652161+ (Lepeophtheirus salmonis)back to top Add to Basket
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