EMLSAG00000008285, EMLSAG00000008285-691051 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000008285
Unique Name	EMLSAG00000008285-691051
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: no visible phenotype
Gallery Image	Title	Gene or target symbol	Sex/Stage	Phenotype	Date
	P F155 (HRG1)	HRG1	female PreAdult2 Adult	-Missing- no visible phenotype	07.03.2014 - 15:55 22.04.2014 - 00:00

Homology

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BLAST of EMLSAG00000008285 vs. C. finmarchicus
Match: gi|592922276|gb|GAXK01036113.1| (TSA: Calanus finmarchicus comp109716_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 88.5817 bits (218), Expect = 9.933e-21
Identity = 49/139 (35.25%), Postives = 77/139 (55.40%), Query Frame = 0

Query:   10 LKFHLVMSSIGFIGGIAGCLVFYIVYSNFHAGTWSLLAGLMAXICFQFHVFYRFDTLDSHYNEKHLYYFRNLGIFMFLMALIAIISYLVISATLGIPMLPVETSLILASVQAFLTLKWSISVYYFSGFYSSKLQTAYTV 148
            + F LV +  G + G++   VF  VY N HAG W+LL+G+ A   F  H+ Y+   L + +    L   RNLGI  FL +  A   Y   + +   PM P++ S ++A V AF+T+KWSI + +F   Y++ L+  Y++
Sbjct:   49 MTFKLVTAGFGILAGMSTFCVFTFVYGNVHAGIWALLSGIFATFVFHLHLLYKNHRLAAWHTLTSLTANRNLGILAFLGSFAATCYYWYTAFSEHQPMYPIKDSDMIAGVWAFMTVKWSIGLTFFGHKYNNLLEREYSL 465

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BLAST of EMLSAG00000008285 vs. C. finmarchicus
Match: gi|592922277|gb|GAXK01036112.1| (TSA: Calanus finmarchicus comp109716_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 88.5817 bits (218), Expect = 2.381e-20
Identity = 49/139 (35.25%), Postives = 77/139 (55.40%), Query Frame = 0

Query:   10 LKFHLVMSSIGFIGGIAGCLVFYIVYSNFHAGTWSLLAGLMAXICFQFHVFYRFDTLDSHYNEKHLYYFRNLGIFMFLMALIAIISYLVISATLGIPMLPVETSLILASVQAFLTLKWSISVYYFSGFYSSKLQTAYTV 148
            + F LV +  G + G++   VF  VY N HAG W+LL+G+ A   F  H+ Y+   L + +    L   RNLGI  FL +  A   Y   + +   PM P++ S ++A V AF+T+KWSI + +F   Y++ L+  Y++
Sbjct:   49 MTFKLVTAGFGILAGMSTFCVFTFVYGNVHAGIWALLSGIFATFVFHLHLLYKNHRLAAWHTLTSLTANRNLGILAFLGSFAATCYYWYTAFSEHQPMYPIKDSDMIAGVWAFMTVKWSIGLTFFGHKYNNLLEREYSL 465

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BLAST of EMLSAG00000008285 vs. C. finmarchicus
Match: gi|592922278|gb|GAXK01036111.1| (TSA: Calanus finmarchicus comp109716_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 88.5817 bits (218), Expect = 2.509e-20
Identity = 49/139 (35.25%), Postives = 77/139 (55.40%), Query Frame = 0

Query:   10 LKFHLVMSSIGFIGGIAGCLVFYIVYSNFHAGTWSLLAGLMAXICFQFHVFYRFDTLDSHYNEKHLYYFRNLGIFMFLMALIAIISYLVISATLGIPMLPVETSLILASVQAFLTLKWSISVYYFSGFYSSKLQTAYTV 148
            + F LV +  G + G++   VF  VY N HAG W+LL+G+ A   F  H+ Y+   L + +    L   RNLGI  FL +  A   Y   + +   PM P++ S ++A V AF+T+KWSI + +F   Y++ L+  Y++
Sbjct:   49 MTFKLVTAGFGILAGMSTFCVFTFVYGNVHAGIWALLSGIFATFVFHLHLLYKNHRLAAWHTLTSLTANRNLGILAFLGSFAATCYYWYTAFSEHQPMYPIKDSDMIAGVWAFMTVKWSIGLTFFGHKYNNLLEREYSL 465

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BLAST of EMLSAG00000008285 vs. C. finmarchicus
Match: gi|592842988|gb|GAXK01114556.1| (TSA: Calanus finmarchicus comp174802_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 73.559 bits (179), Expect = 1.003e-15
Identity = 37/125 (29.60%), Postives = 70/125 (56.00%), Query Frame = 0

Query:   22 IGGIAGCLVFYIV---YSNFHAGTWSLLAGLMAXICFQFHVFYRFDTLDSHYNEKHLYYFRNLGIFMFLMALIAIISYLVISATLGIPMLPVETSLILASVQAFLTLKWSISVYYFSGFYSSKLQ 143
            +G + GCLVF++    Y N  AG+W+L++ + A +    H+ YR   L+  Y+ + L   R + +    ++ I  I Y  +  +   P+ P+  S ++A+V +F+T+KWS  + YFS  Y ++++
Sbjct:  136 LGVLMGCLVFFVFTFGYGNIAAGSWALISAMFAGLVLHLHIVYRMHRLELWYSAQRLTVLRGISLAGLAISTIVSIYYAYLKFSTHQPVYPIRDSFLIAAVWSFMTVKWSAGLAYFSHKYKARIE 510

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BLAST of EMLSAG00000008285 vs. C. finmarchicus
Match: gi|592782620|gb|GAXK01171948.1| (TSA: Calanus finmarchicus comp63205_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 73.559 bits (179), Expect = 1.441e-15
Identity = 40/137 (29.20%), Postives = 72/137 (52.55%), Query Frame = 0

Query:   12 FHLVMSSIGFIGGIAGCLVFYIVYSNFHAGTWSLLAGLMAXICFQFHVFYRFDTLDSHYNEKHLYYFRNLGIFMFLMALIAIISYLVISATLGIPMLPVETSLILASVQAFLTLKWSISVYYFSGFYSSKLQTAYTV 148
            F ++ SS+G I G     VF  ++ NFHAG W+LL+ + A +    H+ YR   L++ +    L   R+LG+   +  L   + Y+  + T   PM P+  S ++A+V AF+++KW   + ++   Y   +   Y++
Sbjct:  243 FKILTSSLGIIMGSIAFPVFTFLFFNFHAGLWALLSIIQASMVLHLHLLYRSYRLETWHTPHSLSACRDLGLLTMIGGLAGTVYYIYTAVTNQEPMFPIHDSSVIAAVWAFMSVKWGAGLAFWGQKYKLVIDREYSL 653

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BLAST of EMLSAG00000008285 vs. C. finmarchicus
Match: gi|592887566|gb|GAXK01070809.1| (TSA: Calanus finmarchicus comp730393_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 31.187 bits (69), Expect = 1.322e+0
Identity = 19/73 (26.03%), Postives = 34/73 (46.58%), Query Frame = 0

Query:    5 SESVKLKFHLVMSSIGFIGGIAGCLVFYIVYSNFHAGTWSLLAGLMAXICFQFHVFYRFDTLDSHYNEKHLYY 77
            S++V++ F   ++S+G +G   G ++  ++ S    G WS+L      +          D + S YNE  L Y
Sbjct: 1537 SDTVRMDFDTSLASVGELGLWHGMVLVLLIPSALLPGMWSVLFVFSGYVAKHRCSVPACDDVSSEYNEPWLNY 1755

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BLAST of EMLSAG00000008285 vs. C. finmarchicus
Match: gi|592811040|gb|GAXK01143528.1| (TSA: Calanus finmarchicus comp4543093_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 28.8758 bits (63), Expect = 6.432e+0
Identity = 24/76 (31.58%), Postives = 41/76 (53.95%), Query Frame = 0

Query:   75 LYYFRNLGIFMF----LMALIAIISYLVIS-ATLGIPM------LPVETSLILASVQAFLTLKWSISVYYFSGFYS 139
            L   RN+G++MF    +++L  +IS   +S  +LG P+      LPV TS I +   +   + ++I+  YFS  +S
Sbjct:  243 LTLVRNIGLWMFSCPFMISLTLLISLSEVSLPSLGKPLNIRLFFLPVSTSFIFSRTLSIRVVCFAITSSYFSSRFS 470

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BLAST of EMLSAG00000008285 vs. C. finmarchicus
Match: gi|592751996|gb|GAXK01202417.1| (TSA: Calanus finmarchicus comp87100_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 28.8758 bits (63), Expect = 9.553e+0
Identity = 20/64 (31.25%), Postives = 36/64 (56.25%), Query Frame = 0

Query:   85 MFLMALIAIISYLVISATLGIPMLPVETSLILASVQAFLTLKWSISVYYFSGFYSSKLQTAYTV 148
            MFL+ L +I S L ++ T  +PM    T+++L+SV + LT  + +  +  SG   +  + A T+
Sbjct: 1869 MFLVTLASIRSSLCLT*TSRLPM----TTIVLSSVSSILTSTFLLKCFLGSGLAVTSPRPAKTI 2048

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BLAST of EMLSAG00000008285 vs. L. salmonis peptides
Match: EMLSAP00000008285 (pep:novel supercontig:LSalAtl2s:LSalAtl2s500:196687:197543:-1 gene:EMLSAG00000008285 transcript:EMLSAT00000008285 description:"augustus_masked-LSalAtl2s500-processed-gene-2.0")

HSP 1 Score: 298.516 bits (763), Expect = 1.320e-104
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0

Query:    1 MCCMSESVKLKFHLVMSSIGFIGGIAGCLVFYIVYSNFHAGTWSLLAGLMAXICFQFHVFYRFDTLDSHYNEKHLYYFRNLGIFMFLMALIAIISYLVISATLGIPMLPVETSLILASVQAFLTLKWSISVYYFSGFYSSKLQTAYTVA 149
            MCCMSESVKLKFHLVMSSIGFIGGIAGCLVFYIVYSNFHAGTWSLLAGLMAXICFQFHVFYRFDTLDSHYNEKHLYYFRNLGIFMFLMALIAIISYLVISATLGIPMLPVETSLILASVQAFLTLKWSISVYYFSGFYSSKLQTAYTVA
Sbjct:    1 MCCMSESVKLKFHLVMSSIGFIGGIAGCLVFYIVYSNFHAGTWSLLAGLMAXICFQFHVFYRFDTLDSHYNEKHLYYFRNLGIFMFLMALIAIISYLVISATLGIPMLPVETSLILASVQAFLTLKWSISVYYFSGFYSSKLQTAYTVA 149

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BLAST of EMLSAG00000008285 vs. Select Arthropod Genomes
Match: EFX85573.1 (hypothetical protein DAPPUDRAFT_300260 [Daphnia pulex])

HSP 1 Score: 64.6994 bits (156), Expect = 5.296e-13
Identity = 46/138 (33.33%), Postives = 69/138 (50.00%), Query Frame = 0

Query:    2 CCMSESVKLK-FHLVMSSIGFIGGIAGCLVFYIVYSNFHAGTWSLLAGLMAXICFQFHVFYRFDTLDSHYNEKHLYYFRNLGIFMFLMALIAIIS---YLVISATLGIPMLPVETSLILASVQAFLTLKWSISVYYFS 135
            CC +       + +V SS+G   GI+   VFY  + N  A  W+L +G+ A       +     T+ S Y   HL   RN+ +  FL+  I+I     YL  +A   IPM+PV+ S I+ SV  F+T KW+  V+ F+
Sbjct:    3 CCQNRDRCCSIWRIVQSSLGIFIGISTAFVFYHNFGNAQASGWALTSGVFAAAALHLAILIHKKTIHSWYTVLHL---RNIQLLAFLLTDISIAVFAWYLFYAAYYKIPMVPVDNSAIVTSVWVFMTAKWTFLVWLFA 137

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BLAST of EMLSAG00000008285 vs. Select Arthropod Genomes
Match: gb|KFM67022.1| (hypothetical protein X975_02444, partial [Stegodyphus mimosarum])

HSP 1 Score: 52.7582 bits (125), Expect = 1.785e-8
Identity = 36/135 (26.67%), Postives = 65/135 (48.15%), Query Frame = 0

Query:   10 LKFHLVMSSIGFIGGIAGCLVFYIVYSNFHAGTWSLLAGLMAXICFQFHVFYRFDTLDSHYNEKHLYYFRNLGIFMFLMALIAIISYLVISATLGIPMLPVETSLILASVQAFLTLKWSISVYYFSGFYSSKLQT 144
            +K   + + +G I GI+  L+ +I Y N +A  W LL G+ A + +  H  Y  +T+   Y  + L   +  GI   ++A+++ I+Y  ++A L             A V A L LKW+  +++    Y + L+ 
Sbjct:    8 VKLKAIFAILGIIAGIS-ILICFIFYKNANAAAWGLLTGIFASVVYSLHRSYLKNTMHLKYTAETLRLTKLCGILCSVLAILSSITYFTLAAVLKQGYKVEGDGYAPAGVFALLALKWTFMMFWEGKRYENFLKN 141

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BLAST of EMLSAG00000008285 vs. Select Arthropod Genomes
Match: gb|KYB26514.1| (hypothetical protein TcasGA2_TC033837 [Tribolium castaneum])

HSP 1 Score: 48.521 bits (114), Expect = 5.142e-7
Identity = 29/118 (24.58%), Postives = 59/118 (50.00%), Query Frame = 0

Query:   24 GIAGCLVFYIVYSNFHAGTWSLLAGLMAXICFQFHVFYRFDTLDSHYNEKHLYYFRNLGIFMFLMALIAIISYLVISATLGIPMLPVETSLILASVQAFLTLKWSISVYYFSGFYSSK 141
            G++G   F I+ +N+ A   +++ G ++ I    H     + L   Y  + L    + GI+ F ++  A++ + VI      P++P+E S ++  +   +TLK  + + YF  +YS +
Sbjct:   16 GVSGFGAF-IILNNYAAAILAIITGFISIITSHIHFLDFKNKLPDWYTPQQLRQMSSFGIYCFAISTSALVYFSVIEIMQKRPIMPIEDSAVIPMIWCLITLKSGLILAYFGRYYSRQ 132

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BLAST of EMLSAG00000008285 vs. nr
Match: gi|1058039627|gb|JAS23475.1| (hypothetical protein g.28221 [Clastoptera arizonana] >gi|1058064077|gb|JAS35700.1| hypothetical protein g.28222 [Clastoptera arizonana])

HSP 1 Score: 73.1738 bits (178), Expect = 1.424e-13
Identity = 39/130 (30.00%), Postives = 68/130 (52.31%), Query Frame = 0

Query:   14 LVMSSIGFIGGIAGCLVFYIVYSNFHAGTWSLLAGLMAXICFQFHVFYRFDTLDSHYNEKHLYYFRNLGIFMFLMALIAIISYLVISATLGIPMLPVETSLILASVQAFLTLKWSISVYYFSGFYSSKLQ 143
            L  S  G   G +    F + YSN+ A  W+L++G++A + F   + +  D L+S ++   L   + L  F  L     II YL       +P+LPV+ S+ +A+V AF+T KW + +Y+ +  Y+  ++
Sbjct:   10 LAFSGFGIFAGFSAFFTFMLYYSNYQASVWALISGIIAAVNFHLMILFYRDKLESWHSVNTLKDIQYLAFFALLFGTTGIIWYLFKIIYYTLPILPVDDSMQIAAVWAFMTAKWGVGLYFITNKYTKYIE 139

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BLAST of EMLSAG00000008285 vs. nr
Match: gi|909579234|ref|XP_013145507.1| (PREDICTED: uncharacterized protein LOC106108783 [Papilio polytes])

HSP 1 Score: 72.4034 bits (176), Expect = 2.446e-13
Identity = 39/131 (29.77%), Postives = 75/131 (57.25%), Query Frame = 0

Query:    8 VKLKFHLVMSSIGFIGGIAGCLVFYIVYSNFHAGTWSLLAGLMAXICFQFHVFYRFDTLDSHYNEKHLYYFRNLGIFMFLMALIAIISYLVISATLGIPMLPVETSLILASVQAFLTLKWSISVYYFSGFY 138
            ++ K ++ +S++G I GIA  + F +VY+N  AG W+LL+G+ A +    H  Y  ++L  +++ K L Y  + GI  F+  L   + Y  +       ++PV+TS+++  + +F  +KW +++Y F+  Y
Sbjct:    2 LRTKIYIAISTLGSILGIAAFICFCLVYANVEAGMWALLSGIHACLTLVLHCHYLKESLHVNFSRKALQYLGDFGIVGFVSGLALTLFYTFLEFYYKQGVIPVQTSIVIRLIWSFAMMKWGLTLYLFTKKY 132

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BLAST of EMLSAG00000008285 vs. nr
Match: gi|1059215883|ref|XP_017754739.1| (PREDICTED: heme transporter hrg1-B-like, partial [Eufriesea mexicana])

HSP 1 Score: 71.2478 bits (173), Expect = 5.371e-13
Identity = 43/127 (33.86%), Postives = 72/127 (56.69%), Query Frame = 0

Query:   16 MSSIGFIGGIAGCLVFYIVYSNFHAGTWSLLAGLMAXICFQFHVFYRFDTLDSHYNEKHLYYFRNLGIFMFLMA---LIAIISYLVISATLGIPMLPVETSLILASVQAFLTLKWSISVYYFSGFYS 139
            +S+ G I  ++  +VF +VY+N+H G WS+L+G++A ICF  H     + L+  Y++  L   R L I  FL A   + A+I YL ++    IP+ P ETS  +++V   +  +W I + Y++  Y 
Sbjct:    1 ISATGIIVAMSAFIVFCVVYNNYHVGFWSILSGILAAICFHLHWLKGKERLERWYSKTIL---RKLNIIGFLSAVAGITALIWYLFVTLYYKIPITPFETSTAISAVWGTVCGQWGIFLMYYAHKYE 124

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BLAST of EMLSAG00000008285 vs. nr
Match: gi|925676652|gb|KOX73855.1| (Heme transporter hrg1-A [Melipona quadrifasciata])

HSP 1 Score: 70.8626 bits (172), Expect = 9.567e-13
Identity = 41/127 (32.28%), Postives = 69/127 (54.33%), Query Frame = 0

Query:   13 HLVMSSIGFIGGIAGCLVFYIVYSNFHAGTWSLLAGLMAXICFQFHVFYRFDTLDSHYNEKHLYYFRNLGIFMFLMALIAIISYLVISATLGIPMLPVETSLILASVQAFLTLKWSISVYYFSGFYS 139
             L++S IG I  I+  +V  IVY+N++ G WS+L+G++A +CF  H      +L+  + +  L Y   +G    +    A+I YL ++    IP+ P+  S  + +V + L  KW I + Y+S  YS
Sbjct:    8 RLIISVIGIIFAISAFIVLSIVYNNYNVGFWSILSGVLAAVCFHLHWVKGKGSLERWHTKTTLRYINVIGFLSAVSGFTALIWYLFLTFYYKIPIEPIAESTAITAVWSMLCGKWGIYLMYYSHTYS 134

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BLAST of EMLSAG00000008285 vs. nr
Match: gi|826419930|ref|XP_012524872.1| (PREDICTED: uncharacterized protein LOC105830219 [Monomorium pharaonis])

HSP 1 Score: 70.0922 bits (170), Expect = 1.528e-12
Identity = 42/136 (30.88%), Postives = 73/136 (53.68%), Query Frame = 0

Query:   13 HLVMSSIGFIGGIAGCLVFYIVYSNFHAGTWSLLAGLMAXICFQFHVFYRFDTLDSHYNEKHLYYFRNLGIFMFLMA---LIAIISYLVISATLGIPMLPVETSLILASVQAFLTLKWSISVYYFSGFYSSKLQTA 145
            HL++S++G + G++   V +I+Y N   G WS+L G +A +CF  H     +TL+  +    L   RNL +  F+ A   + A+I YL ++    IP+ P+  S I+++  +    KW I++ Y+S  Y   +Q  
Sbjct:    8 HLLISALGILIGVSAFFVLFIIYGNHDIGFWSILTGALAGVCFHLHWIKGKETLERWHTRITL---RNLNVVGFVSAVTGVTALIWYLFLTFYYKIPIQPISESTIISAAWSMSCGKWGITLMYYSNKYELLVQEG 140

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BLAST of EMLSAG00000008285 vs. nr
Match: gi|768433570|ref|XP_011558154.1| (PREDICTED: heme transporter hrg1-A-like [Plutella xylostella])

HSP 1 Score: 70.0922 bits (170), Expect = 1.684e-12
Identity = 36/125 (28.80%), Postives = 69/125 (55.20%), Query Frame = 0

Query:    8 VKLKFHLVMSSIGFIGGIAGCLVFYIVYSNFHAGTWSLLAGLMAXICFQFHVFYRFDTLDSHYNEKHLYYFRNLGIFMFLMALIAIISYLVISATLGIPMLPVETSLILASVQAFLTLKWSISVY 132
            ++ K H+ +S++G   G +  +   IVY+N  AG W+LL+G+ A +    H  Y  ++L ++++ K L Y  + G+F F+      I Y  +       ++PV+TS+++  V +F+  KW + +Y
Sbjct:    2 LRTKIHIALSALGIFLGFSAFICIGIVYANVEAGMWALLSGIKAGLALMLHCHYLKESLHANFSRKALQYIGDFGMFGFVSGTALTIFYAFMQIYYQADLMPVQTSIVIRLVWSFMMTKWGLLLY 126

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BLAST of EMLSAG00000008285 vs. nr
Match: gi|1070589370|ref|XP_018407215.1| (PREDICTED: uncharacterized protein LOC108783205 [Cyphomyrmex costatus] >gi|1009383627|gb|KYN06201.1| hypothetical protein ALC62_02863 [Cyphomyrmex costatus])

HSP 1 Score: 69.707 bits (169), Expect = 2.126e-12
Identity = 41/137 (29.93%), Postives = 72/137 (52.55%), Query Frame = 0

Query:   12 FHLVMSSIGFIGGIAGCLVFYIVYSNFHAGTWSLLAGLMAXICFQFHVFYRFDTLDSHYNEKHLYYFRNLGIFMFLMA---LIAIISYLVISATLGIPMLPVETSLILASVQAFLTLKWSISVYYFSGFYSSKLQTA 145
             HL++S++G + GI      +I+Y N   G WS+L G +A +CF  H     +TL+  +    L   RNL +  F+ A   + A+I YL ++    IP+ P+  S ++ +V + +  KW +++ Y+S  Y   +Q  
Sbjct:    7 LHLLVSAVGIVIGIFAFFTLFIIYGNHDVGFWSVLTGALAGVCFHLHWVKGKETLEKWHTGVTL---RNLNVVGFVSAVTGITALIWYLFLTFYYQIPIQPISESTVIPAVWSMICGKWGVTLMYYSNKYELLVQEG 140

[Close]

BLAST of EMLSAG00000008285 vs. nr
Match: gi|1016160403|gb|KZC07565.1| (hypothetical protein WN55_08336 [Dufourea novaeangliae])

HSP 1 Score: 69.707 bits (169), Expect = 2.316e-12
Identity = 41/127 (32.28%), Postives = 70/127 (55.12%), Query Frame = 0

Query:   20 GFIGGIAGCLVFYIVYSNFHAGTWSLLAGLMAXICFQFHVFYRFDTLDSHYNEKHLYYFRNLGIFMFLMALI---AIISYLVISATLGIPMLPVETSLILASVQAFLTLKWSISVYYFSGFYSSKLQ 143
            G I G++ C+V + VY+N   G WS+L+ ++A +CF  H      TL+  + +  L   RNL I  F+ A++   A+I YL ++    IP+ P+  S  +++V + +  KW IS+ Y +  Y   +Q
Sbjct:   15 GVIVGVSACIVLFAVYNNHDVGFWSILSAILAAVCFHLHWVRGRGTLERWHTKVTL---RNLNIIGFVSAVVSITALIWYLFLTCYYQIPIHPISESTAISAVWSMICGKWGISLTYHTYKYELIIQ 138

[Close]

BLAST of EMLSAG00000008285 vs. nr
Match: gi|1070187303|ref|XP_018366403.1| (PREDICTED: heme transporter hrg1-A-like [Trachymyrmex cornetzi])

HSP 1 Score: 69.3218 bits (168), Expect = 3.184e-12
Identity = 42/141 (29.79%), Postives = 74/141 (52.48%), Query Frame = 0

Query:    8 VKLKFHLVMSSIGFIGGIAGCLVFYIVYSNFHAGTWSLLAGLMAXICFQFHVFYRFDTLDSHYNEKHLYYFRNLGIFMFLMA---LIAIISYLVISATLGIPMLPVETSLILASVQAFLTLKWSISVYYFSGFYSSKLQTA 145
            V++   L++S++G +  +    V +I+Y N   G WS+L G +A +CF  H     +TL+  +    L   RNL I  F+ A   + A+I YL ++    IP+ P+  S ++ +V + +  KW I++ Y+S  Y   +Q  
Sbjct:    2 VRVLVRLLISAVGIVMAVLAFFVLFIIYGNRDVGFWSILTGALAGVCFHLHWVKGKETLERWHTGVTL---RNLNIVGFVSAVTSITALIWYLFLTFYYQIPIQPISESTVITAVWSMICGKWGITLMYYSNKYELLVQEG 139

[Close]

BLAST of EMLSAG00000008285 vs. nr
Match: gi|746869097|ref|XP_011065696.1| (PREDICTED: heme transporter hrg1-A-like isoform X1 [Acromyrmex echinatior] >gi|332017898|gb|EGI58558.1| hypothetical protein G5I_13408 [Acromyrmex echinatior])

HSP 1 Score: 69.3218 bits (168), Expect = 3.322e-12
Identity = 43/141 (30.50%), Postives = 75/141 (53.19%), Query Frame = 0

Query:    8 VKLKFHLVMSSIGFIGGIAGCLVFYIVYSNFHAGTWSLLAGLMAXICFQFHVFYRFDTLDSHYNEKHLYYFRNLGIFMFLMALI---AIISYLVISATLGIPMLPVETSLILASVQAFLTLKWSISVYYFSGFYSSKLQTA 145
            +++   L++S+IG +  +    + +I+Y N   G WS+L G +A +CF  H     +TL+  +    L   RNL I  F+ A+I   A+I YL ++    IP+ P+  S I+ +V + +  KW I++ Y+S  Y   +Q  
Sbjct:    2 LRVLVRLLISAIGIVMAVFAFFILFIIYGNRDVGFWSILTGALAGVCFHLHWVKGKETLERWHTGVTL---RNLNILGFVSAVISITALIWYLFLTFYYQIPIHPISESTIITAVWSMICGKWGITLMYYSNKYELLVQEG 139

The following BLAST results are available for this feature:

BLAST of EMLSAG00000008285 vs. GO
BLAST of EMLSAG00000008285 vs. C. finmarchicus
BLAST of EMLSAG00000008285 vs. L. salmonis peptides
BLAST of EMLSAG00000008285 vs. SwissProt
BLAST of EMLSAG00000008285 vs. Select Arthropod Genomes
BLAST of EMLSAG00000008285 vs. nr
BLAST of EMLSAG00000008285 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000008285 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000008285 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 8


Match Name	E-value	Identity	Description
gi\|592922276\|gb\|GAXK01036113.1\|	9.933e-21	35.25	TSA: Calanus finmarchicus comp109716_c0_seq3 trans...	[more]
gi\|592922277\|gb\|GAXK01036112.1\|	2.381e-20	35.25	TSA: Calanus finmarchicus comp109716_c0_seq2 trans...	[more]
gi\|592922278\|gb\|GAXK01036111.1\|	2.509e-20	35.25	TSA: Calanus finmarchicus comp109716_c0_seq1 trans...	[more]
gi\|592842988\|gb\|GAXK01114556.1\|	1.003e-15	29.60	TSA: Calanus finmarchicus comp174802_c0_seq1 trans...	[more]
gi\|592782620\|gb\|GAXK01171948.1\|	1.441e-15	29.20	TSA: Calanus finmarchicus comp63205_c0_seq1 transc...	[more]
gi\|592887566\|gb\|GAXK01070809.1\|	1.322e+0	26.03	TSA: Calanus finmarchicus comp730393_c0_seq1 trans...	[more]
gi\|592811040\|gb\|GAXK01143528.1\|	6.432e+0	31.58	TSA: Calanus finmarchicus comp4543093_c0_seq1 tran...	[more]
gi\|592751996\|gb\|GAXK01202417.1\|	9.553e+0	31.25	TSA: Calanus finmarchicus comp87100_c0_seq1 transc...	[more]

BLAST of EMLSAG00000008285 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1


Match Name	E-value	Identity	Description
EMLSAP00000008285	1.320e-104	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s500:19668...	[more]

BLAST of EMLSAG00000008285 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000008285 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 3


Match Name	E-value	Identity	Description
EFX85573.1	5.296e-13	33.33	hypothetical protein DAPPUDRAFT_300260 [Daphnia pu...	[more]
gb\|KFM67022.1\|	1.785e-8	26.67	hypothetical protein X975_02444, partial [Stegodyp...	[more]
gb\|KYB26514.1\|	5.142e-7	24.58	hypothetical protein TcasGA2_TC033837 [Tribolium c...	[more]

BLAST of EMLSAG00000008285 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1058039627\|gb\|JAS23475.1\|	1.424e-13	30.00	hypothetical protein g.28221 [Clastoptera arizonan...	[more]
gi\|909579234\|ref\|XP_013145507.1\|	2.446e-13	29.77	PREDICTED: uncharacterized protein LOC106108783 [P...	[more]
gi\|1059215883\|ref\|XP_017754739.1\|	5.371e-13	33.86	PREDICTED: heme transporter hrg1-B-like, partial [...	[more]
gi\|925676652\|gb\|KOX73855.1\|	9.567e-13	32.28	Heme transporter hrg1-A [Melipona quadrifasciata]	[more]
gi\|826419930\|ref\|XP_012524872.1\|	1.528e-12	30.88	PREDICTED: uncharacterized protein LOC105830219 [M...	[more]
gi\|768433570\|ref\|XP_011558154.1\|	1.684e-12	28.80	PREDICTED: heme transporter hrg1-A-like [Plutella ...	[more]
gi\|1070589370\|ref\|XP_018407215.1\|	2.126e-12	29.93	PREDICTED: uncharacterized protein LOC108783205 [C...	[more]
gi\|1016160403\|gb\|KZC07565.1\|	2.316e-12	32.28	hypothetical protein WN55_08336 [Dufourea novaeang...	[more]
gi\|1070187303\|ref\|XP_018366403.1\|	3.184e-12	29.79	PREDICTED: heme transporter hrg1-A-like [Trachymyr...	[more]
gi\|746869097\|ref\|XP_011065696.1\|	3.322e-12	30.50	PREDICTED: heme transporter hrg1-A-like isoform X1...	[more]

Pages

BLAST of EMLSAG00000008285 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0


Match Name	E-value	Identity	Description

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s500	supercontig	LSalAtl2s500:196687..197543 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	augustus_masked-LSalAtl2s500-processed-gene-2.0
Biotype	protein_coding
Evidence	IEA
Note	Heme transporter hrg-1 [Zootermopsis nevadensis]

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000008285 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000008285	EMLSAT00000008285-704132	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s500:196687..197543-

gene from alignment at LSalAtl2s500:196687..197543-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000008285-691051 ID=EMLSAG00000008285-691051|Name=EMLSAG00000008285|organism=Lepeophtheirus salmonis|type=gene|length=857bp|location=Sequence derived from alignment at LSalAtl2s500:196687..197543- (Lepeophtheirus salmonis)
ATGTGTTGCATGTCAGAAAGTGTCAAATTAAAGTTTCATCTCGTTATGAG
CTCTATAGGCTTTATTGGAGGAATAGCTGGATGTCTTGTGTTTTATATTG
TGTACTCCAACTTTCATGCAGGTAGTAATGATGGACGTAAATAATAATGT
CATTTTAAGGAGCTAATGGATTAACATTACTACTACTACTCCGTCTATTA
ATTTTAAAGTATTTATGTATCCATGAAGTGGAATCACATAGTTAATTCAT
TATACAGGCTATTTCGTAATGTGTTTGTTGCATGTTACGTAACGTTCCTA
ATTTATAACACTATAATGTAATGTCTTATAGTTGTATAATCTGTCTTTGT
TTGTTGCTTGCTACAAACAAAGACATAAGGTCATAATTTGACGAACAATC
ATTGTATATTTATAATGTATGTTTCAATTTCTTTCTATTACTTTCAGGAA
CATGGAGTCTGCTAGCAGGCCTCATGGCAGKTATTTGTTTCCAATTCCAT
GTATTTTACCGATTTGACACCTTGGATTCTCATTATAACGAAAAACATTT
ATATTACTTTCGGAATTTAGGCATATTCATGTTTCTTATGGCTTTAATAG
GTAACGCCCTTTTTGAATTATTAATAATAATTCGTTCAATAGTACCTGCT
TACTTTAAATTATCTGACTTTTCTTTTATAGCCATCATATCGTACCTTGT
TATCTCTGCAACTCTTGGCATACCCATGCTCCCGGTAGAAACGAGTCTTA
TACTTGCATCTGTTCAAGCATTTCTCACACTCAAATGGAGTATTTCCGTC
TATTACTTCTCTGGATTCTATTCGTCTAAGCTACAAACGGCGTATACTGT
AGCCTAG

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