EMLSAT00000000106, EMLSAT00000000106-695953 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000106
Unique NameEMLSAT00000000106-695953
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s101supercontigLSalAtl2s101:146626..151738 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000106 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000106EMLSAG00000000106-682872Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000449EMLSAE00000000449-709377Lepeophtheirus salmonisexon
EMLSAE00000000450EMLSAE00000000450-709378Lepeophtheirus salmonisexon
EMLSAE00000000451EMLSAE00000000451-709379Lepeophtheirus salmonisexon
EMLSAE00000000452EMLSAE00000000452-709380Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773259auto773259Lepeophtheirus salmonispolypeptide
EMLSAP00000000106EMLSAP00000000106Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000106

>EMLSAP00000000106 ID=EMLSAP00000000106|Name=EMLSAP00000000106|organism=Lepeophtheirus salmonis|type=polypeptide|length=1286bp
MNTTPSCSCDIVSSHINKQGTSAIIPTLSCSNERFKISDLSRRNTREYSS
SPQCDQGLILLKRLRIADKELKAHEWMSVCGNHKKYLLQDFPLKNHQCGI
CFNSDQIRLRRVSTKSQDLYKGEVVVGEFVCSECDDLILDGEGDESQHKK
ITIGQIWVTLDNSFCLINSSVPSLRLLCRGLTNKEPLLNPPELLIKDAIE
IRRSLDNANQANKEFITDRMIALGIIPHFSEFRSTADACIRMLHNLLSDG
DRKLNKAFWFLKLKLSAFAFLPDENKSGSSKMDQYAFLRKDRICKVLCLA
CDENECTGCQRPAYPSPISLGDSKGRHLHYLQTTCRCCKKRTSTFHSHPR
GNTLRCSSNNCKLNYTDGFKRLCDVDIVFEDDYDVHPQAVCGGCRTYLTS
ATSPFMSGFPNFYPHNELFCDCDLNFFYANASVQESGSCLSVVMNFSRIP
SLTFLAGSILASPAKNNWINTNYLTVKMALEIYQTFMYVHNKKSPDTYEY
FKTLALAGVLRYPIKVAFHNKANAFQTVLTILCDSMSHSSRENRTKFRRK
LETILNADFYGTEPSLRLTKKTVKFRRNFCVIVMCVICSNLLCEGICGRI
PSDPSGSTHKRAKKSSNNSNHKLFRSYDKKLGLRGDLTYKEFQNYRLSGT
FVANDEINHYCVNCLNLKCKGCQNSSSDSQKENLKLKLKLEELPTKKELS
NYNTTGRFVFEDDLPLINKSKKQSKSNGNFSSSSPKTNDNYSTKSIGGSK
HGEFFSHCTDCKFYFRREHIYLKHLETCCPGMNSLICSTCQRHFKSEVGM
LKHNCEGIYNLENHQFKNIALDLGSIEYDHFIYILLNHSLPHHWRASSGP
KEETLVMEKESVRFRFVISRYKKISNKARLKGEGVKAFKEEIWPIVAKLA
IPGEEEEDGDDDDLEEEEDEYELKCAGCHLDNFSTLSELDKHQVECQDYQ
NVADLWECDGCDKVFSYETEYIKHIKTCEVIEIPEDIRSFYPDDKGRIFC
PGCSQVPSLMLLCCGLLSPKKLIKNCKVPPLNPESKVGALERDRFWERIR
LSFYHGFGDFESFEKCLEKQKRILGFLITRIRSSSPTKIVWNHWLSKIKM
FILAPLHDQFMEEAGSFSDHEERSFKVIEYPFMSESNCKSIIQHLCLQCW
DSVCVGCSGEIHQEDYYEKELCTISQTLFFKEFGVICTSEKLFNECTQLG
MSLDLKRRASIHELIQYKKGHKIINGTQFEKGGIKKLQATTTTLPLQNNH
FNLEKIKKENHRISVLSKAAVSSMPWLIDEECILPD
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mRNA from alignment at LSalAtl2s101:146626..151738-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000106-695953 ID=EMLSAT00000000106-695953|Name=EMLSAT00000000106|organism=Lepeophtheirus salmonis|type=mRNA|length=5113bp|location=Sequence derived from alignment at LSalAtl2s101:146626..151738- (Lepeophtheirus salmonis)
ATGAATACGACTCCCAGCTGCAGCTGTGATATAGTTTCTTCTCATATTAA TAAACAAGGAACTAGTGCTATCATCCCTACTTTATCCTGTAGCAATGAAC GCTTTAAAATATCGGATCTCTCTCGCAGAAATACTAGAGAGTACTCTTCT TCTCCTCAATGTGATCAAGGACTCATTCTTTTAAAACGTCTTCGAATAGC AGATAAAGAGCTCAAAGCCCATGAATGGATGAGTGTGTGTGGGAATCATA AAAAATATTTGCTTCAGGATTTTCCTCTCAAAAACCACCAATGCGGTATT TGTTTTAACAGTGATCAAATACGGCTTAGAAGAGTTTCTACAAAGTCGCA GGATTTGTACAAAGGAGAAGTCGTGGTTGGGGAATTCGTATGTTCGGAGT GTGATGATTTGATATTAGATGGAGAAGGGGATGAGAGTCAGCATAAAAAA ATAACCATTGGGCAGATTTGGGTTACATTGGATAATTCATTTTGTCTTAT TAATAGCTCTGTACCTTCGCTCAGGTCAGTACTTATATACATTTAATTAT AGGCTATAATATTGGGAGGAGGAAGAAACTCCTGTTAAAAAATATGTGAA AGATTTTTCCACTTTTAATTATATATATGTGTGGGCTATTTTCTCTCTCC AGATCTGAAAGGGACACTTAATTATCAATTATCGTCATCAAAATAACTAA TAAAAATATCAAATAATATTATGTAGTTAGTTTTTCTTTTCATCTGATTC CTTCGCTCGTTCGGCCTCTACTTCTTCTCAAATTACACTTTTTGGAAATT TCTTTAATTCATAACAAGAAAGTTAAATTGAATGTAAAATGCACATATTC TATACGTATATAGAATATCAAATGTGATGTAAATCCAGTTTTATTTGTCT CTACATTTTTCTGCTCCCTTTTATACTAACAATACCACAGATWTTTATTC ATTAAACGATGATTTTTTTAGTMCTGCCGTAACCACAAACCAACTACTAC TAGAGTACCTTAATATTATAGCCAGATACTCTACACATAATTTTACTATG TATGTATTACTATTTCAGATTATTATGTAGAGGCTTAACCAACAAAGAGC CCCTTCTCAATCCACCTGAATTGCTCATAAAAGATGCTATTGAAATCCGA CGTTCCTTAGATAATGCAAATCAAGCCAATAAGGAATTTATAACTGATAG AATGATAGCCCTCGGTATTATTCCCCACTTTTCTGAATTTCGCTCAACTG CAGACGCTTGCATTCGAATGCTACACAACCTACTGTCCGATGGGGATCGC AAATTAAACAAAGCATTTTGGTTTTTGAAACTTAAACTCAGTGCTTTTGC TTTCCTCCCCGATGAAAACAAAAGTGGATCCTCTAAAATGGATCAGTATG CTTTTCTACGAAAGGATAGGATTTGTAAAGTACTCTGTCTTGCCTGCGAT GAAAATGAGTGCACRGGGTGTCAGAGGCCTGCCTATCCATCACCAATCTC TTTGGGGGACTCCAAGGGAAGACATTTACATTACTTACAAACGACGTGTC GATGTTGTAAAAAACGGACAAGTACTTTTCATAGTCACCCTCGGGGTAAT ACCTTACGTTGCTCCTCTAACAATTGTAAACTCAACTATACTGATGGGTT TAAGCGACTATGTGATGTGGATATAGTCTTTGAAGATGACTATGATGTTC ATCCTCAAGCTGTATGTGGAGGATGTCGAACGTATCTAACCTCTGCCACG TCTCCTTTCATGAGTGGTTTTCCAAACTTTTACCCTCACAATGAATTATT TTGTGATTGCGATTTAAATTTCTTTTACGCGAATGCCAGTGTTCAAGAAT CGGGTTCATGTTTAAGTGTAGTGATGAACTTTTCTAGAATTCCAAGTTTG ACTTTTTTGGCTGGAAGTATTCTTGCTTCCCCTGCAAAAAATAATTGGAT AAACACCAATTATCTTACTGTTAAAATGGCACTAGAGATTTATCAAACTT TTATGTATGTTCACAATAAGAAAAGTCCCGACACCTATGAATATTTCAAG ACACTTGCACTGGCAGGGGTTCTTCGCTACCCCATTAAAGTAGCCTTCCA TAACAAGGCAAATGCATTTCAAACTGTGCTAACTATCTTATGTGATTCCA TGTCACATTCATCCAGGGAAAATCGTACAAAATTTCGTCGTAAACTAGAA ACAATTCTCAATGCGGATTTCTACGGAACAGAGCCATCATTGAGACTTAC GAAAAAAACTGTTAAATTTAGAAGAAATTTCTGTGTTATTGTTATGTGTG TGATATGCTCAAATCTACTATGTGAGGGAATTTGTGGACGGATTCCATCC GATCCCTCTGGCTCAACTCATAAACGTGCCAAAAAAAGTTCCAATAATTC AAATCATAAGTTATTCCGTTCCTATGATAAAAAGTTAGGTCTTCGTGGGG ATTTGACCTATAAGGAATTCCAAAATTATCGACTCTCAGGAACCTTTGTT GCAAATGATGAAATTAATCATTATTGTGTAAACTGTTTAAACTTGAAATG TAAAGGTTGTCAAAATTCTTCAAGTGACTCACAAAAAGAAAATCTCAAAT TGAAGCTTAAACTTGAGGAGCTACCCACGAAGAAAGAGCTATCCAACTAT AATACCACCGGTAGGTTTGTTTTTGAAGATGATCTGCCCCTTATAAATAA ATCAAAAAAGCAATCTAAGAGCAATGGGAACTTTTCATCTTCCTCACCAA AAACAAATGATAATTATTCTACTAAATCCATCGGAGGCTCAAAACACGGT GAATTTTTTAGTCACTGCACGGACTGTAAATTTTATTTCCGCCGCGAACA CATTTATCTTAAGCACTTGGAAACATGCTGCCCAGGAATGAATTCGCTTA TTTGTTCAACATGTCAACGACATTTTAAGTCCGAAGTCGGAATGCTCAAA CATAATTGTGAGGGGATATATAATTTGGAGAACCATCAATTCAAAAATAT CGCATTGGATTTAGGGTCCATAGAATACGATCATTTTATATATATATTGC TAAATCATTCTCTCCCTCATCATTGGAGAGCCTCGTCCGGTCCTAAAGAG GAAACACTCGTGATGGAAAAGGAATCTGTTCGCTTCCGCTTTGTTATATC TAGATATAAAAAAATTAGCAATAAAGCTCGTCTCAAGGGCGAAGGGGTCA AGGCATTTAAGGAAGAAATATGGCCAATTGTAGCTAAACTTGCGATTCCT GGAGAAGAAGAAGAAGACGGAGATGATGATGATTTAGAAGAAGAGGAAGA TGAGTATGAGCTCAAATGTGCTGGTTGTCATTTGGATAACTTTTCCACGT TGTCAGAACTAGATAAACATCAGGTTGAATGCCAGGACTATCAAAATGTG GCAGATCTATGGGAGTGTGATGGCTGTGACAAGGTATTTTCCTATGAAAC AGAGTACATTAAGCACATCAAGACTTGTGAAGTGATAGAGATTCCAGAAG ATATCCGTTCTTTTTATCCAGATGATAAAGGAAGAATTTTTTGTCCAGGA TGTTCTCAAGTATTTATTGATGACGAATTGGAGTACTTTAGACATTTAAA AATGTGTAGATTTGTGGAGTTTGAAAATTACCCCTGCAAAAAATGCAAAT TAAAGTTTTCTACTCAAAAAACACTTTTGGCACACGATTGTTCGAACTCA TATCATATCAATAGCTCTCCCCCTGCAGTAGCAACCATCACTTCCAACTC AAAGAGACATTCAACATCACCAATCCCTCAAAATTTTGGAATTAAAAAAT CCAGGATAGAGGAGCTAAATTTGTTCAATGATAATAATACATCAACAACT CCATATCAGCCAATCTGTAAAATGGGGGATTATAAGTGCCCCATTTGCGG ACTAAAATTTACATTGAACCAACCTTACGGTAATCATGTGAAAAATACAA TGTGTGTTTCCCTCAATTCCTCCGTTGTTCCCTATGAGTATAAACATATC AAGACCCTTAGATTAAAATTCGCATCCATCAGCTTCAATTCAAATTATGA TAATGATGGTTCCTCCATTATCATGAAGATAACGTATAGTCGGGKAAGTA TTGGACGTAAAAAATTTTCTAGAGACATATATCTAAATATCTTGATAAAT ATATACCTAACTATTTTTTATATATAATCAAAAGCAATGTTTTTTATTTA CATTTTTCTTATATAGGTTCCTAGTCTAATGTTGCTTTGCTGTGGACTAC TGTCTCCTAAGAAACTAATTAAGAACTGTAAAGTACCTCCTTTAAGTATC AAAGATGCTCTCGAACTTTATCAAAGCCTCAACAAGTCATTTTTAGATCC AGAAAGTAAGGTAGGAGCACTGGAAAGAGATCGTTTTTGGGAGCGAATAC GTCTTTCATTCTATCATGGTTTTGGAGATTTTGAGTCCTTTGAAAAATGT TTGGAAAAGCAGAAAAGGATTCTAGGGTTTCTAATTACTCGAATAAGATC ATCTTCTCCCACAAAGATTGTTTGGAATCACTGGCTATCAAAAATCAAAA TGTTCATTCTTGCACCTCTTCACGACCAATTTATGGAGGAAGCAGGAAGT TTTTCTGATCATGAGGAACGTTCATTCAAAGTGATTGAGTACCCATTCAT GAGTGAGTCAAATTGTAAGTCAATTATTCAACATTTATGTCTACAATGCT GGGATAGTGTTTGTGTGGGCTGTTCAGGAGAAATTCATCAAGAGGACTAT TATGAAAAAGAGCTCTGTACTATTTCTCAGACACTTTTCTTCAAGGAATT CGGAGTGATTTGTACGAGTGAGAAGTTGTTCAATGAATGCACGCAATTGG GGATGAGCCTAGACTTAAAACGAAGGGCTTCTATTCATGAGCTGATTCAG TATAAAAAGGGACATAAAATAATTAATGGAACGCAATTTGAGAAAGGAGG GATTAAGAAATTGCAAGCTACTACTACTACTCTGCCCCTTCAAAATAACC ATTTCAATTTAGAGAAAATTAAAAAGGAGAATCACCGCATATCTGTATTG TCCAAGGCCGCTGTTTCTTCAATGCCTTGGCTAATTGATGAAGAATGTAT ACTTCCAGATTGA
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