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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s101 | supercontig | LSalAtl2s101:146626..151738 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000000106 >EMLSAP00000000106 ID=EMLSAP00000000106|Name=EMLSAP00000000106|organism=Lepeophtheirus salmonis|type=polypeptide|length=1286bp
MNTTPSCSCDIVSSHINKQGTSAIIPTLSCSNERFKISDLSRRNTREYSS
SPQCDQGLILLKRLRIADKELKAHEWMSVCGNHKKYLLQDFPLKNHQCGI
CFNSDQIRLRRVSTKSQDLYKGEVVVGEFVCSECDDLILDGEGDESQHKK
ITIGQIWVTLDNSFCLINSSVPSLRLLCRGLTNKEPLLNPPELLIKDAIE
IRRSLDNANQANKEFITDRMIALGIIPHFSEFRSTADACIRMLHNLLSDG
DRKLNKAFWFLKLKLSAFAFLPDENKSGSSKMDQYAFLRKDRICKVLCLA
CDENECTGCQRPAYPSPISLGDSKGRHLHYLQTTCRCCKKRTSTFHSHPR
GNTLRCSSNNCKLNYTDGFKRLCDVDIVFEDDYDVHPQAVCGGCRTYLTS
ATSPFMSGFPNFYPHNELFCDCDLNFFYANASVQESGSCLSVVMNFSRIP
SLTFLAGSILASPAKNNWINTNYLTVKMALEIYQTFMYVHNKKSPDTYEY
FKTLALAGVLRYPIKVAFHNKANAFQTVLTILCDSMSHSSRENRTKFRRK
LETILNADFYGTEPSLRLTKKTVKFRRNFCVIVMCVICSNLLCEGICGRI
PSDPSGSTHKRAKKSSNNSNHKLFRSYDKKLGLRGDLTYKEFQNYRLSGT
FVANDEINHYCVNCLNLKCKGCQNSSSDSQKENLKLKLKLEELPTKKELS
NYNTTGRFVFEDDLPLINKSKKQSKSNGNFSSSSPKTNDNYSTKSIGGSK
HGEFFSHCTDCKFYFRREHIYLKHLETCCPGMNSLICSTCQRHFKSEVGM
LKHNCEGIYNLENHQFKNIALDLGSIEYDHFIYILLNHSLPHHWRASSGP
KEETLVMEKESVRFRFVISRYKKISNKARLKGEGVKAFKEEIWPIVAKLA
IPGEEEEDGDDDDLEEEEDEYELKCAGCHLDNFSTLSELDKHQVECQDYQ
NVADLWECDGCDKVFSYETEYIKHIKTCEVIEIPEDIRSFYPDDKGRIFC
PGCSQVPSLMLLCCGLLSPKKLIKNCKVPPLNPESKVGALERDRFWERIR
LSFYHGFGDFESFEKCLEKQKRILGFLITRIRSSSPTKIVWNHWLSKIKM
FILAPLHDQFMEEAGSFSDHEERSFKVIEYPFMSESNCKSIIQHLCLQCW
DSVCVGCSGEIHQEDYYEKELCTISQTLFFKEFGVICTSEKLFNECTQLG
MSLDLKRRASIHELIQYKKGHKIINGTQFEKGGIKKLQATTTTLPLQNNH
FNLEKIKKENHRISVLSKAAVSSMPWLIDEECILPD back to topmRNA from alignment at LSalAtl2s101:146626..151738- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000000106-695953 ID=EMLSAT00000000106-695953|Name=EMLSAT00000000106|organism=Lepeophtheirus salmonis|type=mRNA|length=5113bp|location=Sequence derived from alignment at LSalAtl2s101:146626..151738- (Lepeophtheirus salmonis)
ATGAATACGACTCCCAGCTGCAGCTGTGATATAGTTTCTTCTCATATTAA
TAAACAAGGAACTAGTGCTATCATCCCTACTTTATCCTGTAGCAATGAAC
GCTTTAAAATATCGGATCTCTCTCGCAGAAATACTAGAGAGTACTCTTCT
TCTCCTCAATGTGATCAAGGACTCATTCTTTTAAAACGTCTTCGAATAGC
AGATAAAGAGCTCAAAGCCCATGAATGGATGAGTGTGTGTGGGAATCATA
AAAAATATTTGCTTCAGGATTTTCCTCTCAAAAACCACCAATGCGGTATT
TGTTTTAACAGTGATCAAATACGGCTTAGAAGAGTTTCTACAAAGTCGCA
GGATTTGTACAAAGGAGAAGTCGTGGTTGGGGAATTCGTATGTTCGGAGT
GTGATGATTTGATATTAGATGGAGAAGGGGATGAGAGTCAGCATAAAAAA
ATAACCATTGGGCAGATTTGGGTTACATTGGATAATTCATTTTGTCTTAT
TAATAGCTCTGTACCTTCGCTCAGGTCAGTACTTATATACATTTAATTAT
AGGCTATAATATTGGGAGGAGGAAGAAACTCCTGTTAAAAAATATGTGAA
AGATTTTTCCACTTTTAATTATATATATGTGTGGGCTATTTTCTCTCTCC
AGATCTGAAAGGGACACTTAATTATCAATTATCGTCATCAAAATAACTAA
TAAAAATATCAAATAATATTATGTAGTTAGTTTTTCTTTTCATCTGATTC
CTTCGCTCGTTCGGCCTCTACTTCTTCTCAAATTACACTTTTTGGAAATT
TCTTTAATTCATAACAAGAAAGTTAAATTGAATGTAAAATGCACATATTC
TATACGTATATAGAATATCAAATGTGATGTAAATCCAGTTTTATTTGTCT
CTACATTTTTCTGCTCCCTTTTATACTAACAATACCACAGATWTTTATTC
ATTAAACGATGATTTTTTTAGTMCTGCCGTAACCACAAACCAACTACTAC
TAGAGTACCTTAATATTATAGCCAGATACTCTACACATAATTTTACTATG
TATGTATTACTATTTCAGATTATTATGTAGAGGCTTAACCAACAAAGAGC
CCCTTCTCAATCCACCTGAATTGCTCATAAAAGATGCTATTGAAATCCGA
CGTTCCTTAGATAATGCAAATCAAGCCAATAAGGAATTTATAACTGATAG
AATGATAGCCCTCGGTATTATTCCCCACTTTTCTGAATTTCGCTCAACTG
CAGACGCTTGCATTCGAATGCTACACAACCTACTGTCCGATGGGGATCGC
AAATTAAACAAAGCATTTTGGTTTTTGAAACTTAAACTCAGTGCTTTTGC
TTTCCTCCCCGATGAAAACAAAAGTGGATCCTCTAAAATGGATCAGTATG
CTTTTCTACGAAAGGATAGGATTTGTAAAGTACTCTGTCTTGCCTGCGAT
GAAAATGAGTGCACRGGGTGTCAGAGGCCTGCCTATCCATCACCAATCTC
TTTGGGGGACTCCAAGGGAAGACATTTACATTACTTACAAACGACGTGTC
GATGTTGTAAAAAACGGACAAGTACTTTTCATAGTCACCCTCGGGGTAAT
ACCTTACGTTGCTCCTCTAACAATTGTAAACTCAACTATACTGATGGGTT
TAAGCGACTATGTGATGTGGATATAGTCTTTGAAGATGACTATGATGTTC
ATCCTCAAGCTGTATGTGGAGGATGTCGAACGTATCTAACCTCTGCCACG
TCTCCTTTCATGAGTGGTTTTCCAAACTTTTACCCTCACAATGAATTATT
TTGTGATTGCGATTTAAATTTCTTTTACGCGAATGCCAGTGTTCAAGAAT
CGGGTTCATGTTTAAGTGTAGTGATGAACTTTTCTAGAATTCCAAGTTTG
ACTTTTTTGGCTGGAAGTATTCTTGCTTCCCCTGCAAAAAATAATTGGAT
AAACACCAATTATCTTACTGTTAAAATGGCACTAGAGATTTATCAAACTT
TTATGTATGTTCACAATAAGAAAAGTCCCGACACCTATGAATATTTCAAG
ACACTTGCACTGGCAGGGGTTCTTCGCTACCCCATTAAAGTAGCCTTCCA
TAACAAGGCAAATGCATTTCAAACTGTGCTAACTATCTTATGTGATTCCA
TGTCACATTCATCCAGGGAAAATCGTACAAAATTTCGTCGTAAACTAGAA
ACAATTCTCAATGCGGATTTCTACGGAACAGAGCCATCATTGAGACTTAC
GAAAAAAACTGTTAAATTTAGAAGAAATTTCTGTGTTATTGTTATGTGTG
TGATATGCTCAAATCTACTATGTGAGGGAATTTGTGGACGGATTCCATCC
GATCCCTCTGGCTCAACTCATAAACGTGCCAAAAAAAGTTCCAATAATTC
AAATCATAAGTTATTCCGTTCCTATGATAAAAAGTTAGGTCTTCGTGGGG
ATTTGACCTATAAGGAATTCCAAAATTATCGACTCTCAGGAACCTTTGTT
GCAAATGATGAAATTAATCATTATTGTGTAAACTGTTTAAACTTGAAATG
TAAAGGTTGTCAAAATTCTTCAAGTGACTCACAAAAAGAAAATCTCAAAT
TGAAGCTTAAACTTGAGGAGCTACCCACGAAGAAAGAGCTATCCAACTAT
AATACCACCGGTAGGTTTGTTTTTGAAGATGATCTGCCCCTTATAAATAA
ATCAAAAAAGCAATCTAAGAGCAATGGGAACTTTTCATCTTCCTCACCAA
AAACAAATGATAATTATTCTACTAAATCCATCGGAGGCTCAAAACACGGT
GAATTTTTTAGTCACTGCACGGACTGTAAATTTTATTTCCGCCGCGAACA
CATTTATCTTAAGCACTTGGAAACATGCTGCCCAGGAATGAATTCGCTTA
TTTGTTCAACATGTCAACGACATTTTAAGTCCGAAGTCGGAATGCTCAAA
CATAATTGTGAGGGGATATATAATTTGGAGAACCATCAATTCAAAAATAT
CGCATTGGATTTAGGGTCCATAGAATACGATCATTTTATATATATATTGC
TAAATCATTCTCTCCCTCATCATTGGAGAGCCTCGTCCGGTCCTAAAGAG
GAAACACTCGTGATGGAAAAGGAATCTGTTCGCTTCCGCTTTGTTATATC
TAGATATAAAAAAATTAGCAATAAAGCTCGTCTCAAGGGCGAAGGGGTCA
AGGCATTTAAGGAAGAAATATGGCCAATTGTAGCTAAACTTGCGATTCCT
GGAGAAGAAGAAGAAGACGGAGATGATGATGATTTAGAAGAAGAGGAAGA
TGAGTATGAGCTCAAATGTGCTGGTTGTCATTTGGATAACTTTTCCACGT
TGTCAGAACTAGATAAACATCAGGTTGAATGCCAGGACTATCAAAATGTG
GCAGATCTATGGGAGTGTGATGGCTGTGACAAGGTATTTTCCTATGAAAC
AGAGTACATTAAGCACATCAAGACTTGTGAAGTGATAGAGATTCCAGAAG
ATATCCGTTCTTTTTATCCAGATGATAAAGGAAGAATTTTTTGTCCAGGA
TGTTCTCAAGTATTTATTGATGACGAATTGGAGTACTTTAGACATTTAAA
AATGTGTAGATTTGTGGAGTTTGAAAATTACCCCTGCAAAAAATGCAAAT
TAAAGTTTTCTACTCAAAAAACACTTTTGGCACACGATTGTTCGAACTCA
TATCATATCAATAGCTCTCCCCCTGCAGTAGCAACCATCACTTCCAACTC
AAAGAGACATTCAACATCACCAATCCCTCAAAATTTTGGAATTAAAAAAT
CCAGGATAGAGGAGCTAAATTTGTTCAATGATAATAATACATCAACAACT
CCATATCAGCCAATCTGTAAAATGGGGGATTATAAGTGCCCCATTTGCGG
ACTAAAATTTACATTGAACCAACCTTACGGTAATCATGTGAAAAATACAA
TGTGTGTTTCCCTCAATTCCTCCGTTGTTCCCTATGAGTATAAACATATC
AAGACCCTTAGATTAAAATTCGCATCCATCAGCTTCAATTCAAATTATGA
TAATGATGGTTCCTCCATTATCATGAAGATAACGTATAGTCGGGKAAGTA
TTGGACGTAAAAAATTTTCTAGAGACATATATCTAAATATCTTGATAAAT
ATATACCTAACTATTTTTTATATATAATCAAAAGCAATGTTTTTTATTTA
CATTTTTCTTATATAGGTTCCTAGTCTAATGTTGCTTTGCTGTGGACTAC
TGTCTCCTAAGAAACTAATTAAGAACTGTAAAGTACCTCCTTTAAGTATC
AAAGATGCTCTCGAACTTTATCAAAGCCTCAACAAGTCATTTTTAGATCC
AGAAAGTAAGGTAGGAGCACTGGAAAGAGATCGTTTTTGGGAGCGAATAC
GTCTTTCATTCTATCATGGTTTTGGAGATTTTGAGTCCTTTGAAAAATGT
TTGGAAAAGCAGAAAAGGATTCTAGGGTTTCTAATTACTCGAATAAGATC
ATCTTCTCCCACAAAGATTGTTTGGAATCACTGGCTATCAAAAATCAAAA
TGTTCATTCTTGCACCTCTTCACGACCAATTTATGGAGGAAGCAGGAAGT
TTTTCTGATCATGAGGAACGTTCATTCAAAGTGATTGAGTACCCATTCAT
GAGTGAGTCAAATTGTAAGTCAATTATTCAACATTTATGTCTACAATGCT
GGGATAGTGTTTGTGTGGGCTGTTCAGGAGAAATTCATCAAGAGGACTAT
TATGAAAAAGAGCTCTGTACTATTTCTCAGACACTTTTCTTCAAGGAATT
CGGAGTGATTTGTACGAGTGAGAAGTTGTTCAATGAATGCACGCAATTGG
GGATGAGCCTAGACTTAAAACGAAGGGCTTCTATTCATGAGCTGATTCAG
TATAAAAAGGGACATAAAATAATTAATGGAACGCAATTTGAGAAAGGAGG
GATTAAGAAATTGCAAGCTACTACTACTACTCTGCCCCTTCAAAATAACC
ATTTCAATTTAGAGAAAATTAAAAAGGAGAATCACCGCATATCTGTATTG
TCCAAGGCCGCTGTTTCTTCAATGCCTTGGCTAATTGATGAAGAATGTAT
ACTTCCAGATTGA back to top
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