EMLSAT00000001316, EMLSAT00000001316-697163 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001316
Unique NameEMLSAT00000001316-697163
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: -Missing-
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
AN F336 male
  1. PreAdult1
  2. Adult
 -Missing-
-Missing- 		01.11.2017 - 07:35
03.01.2018 - 23:23
1316/11944/699 testis genes male
  1. PreAdult 1
 -Missing-
-Missing- 		22.02.2018 - 10:36
27.03.2018 - 10:36
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: no visible phenotype
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
AU F336 male
  1. Adult
 -Missing-
no visible phenotype 		01.02.2019 - 08:35
07.03.2019 - 08:23
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1222supercontigLSalAtl2s1222:82149..82639 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001316 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001316EMLSAG00000001316-684082Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005765EMLSAE00000005765-714693Lepeophtheirus salmonisexon
EMLSAE00000005766EMLSAE00000005766-714694Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771655auto771655Lepeophtheirus salmonispolypeptide
EMLSAP00000001316EMLSAP00000001316Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001316

>EMLSAP00000001316 ID=EMLSAP00000001316|Name=EMLSAP00000001316|organism=Lepeophtheirus salmonis|type=polypeptide|length=140bp
MSRGMSCNLDLKLNQSYSQCPDEFGNASFLSNPTRLELLMSRVQTLVQQS
NELSKNEMEMLQALRATLISCVEEMIAAIEAEITKNQDLRCNTIKNAQKI
IQDRFHSIKPDEDELKGFSSELQLFIRDVDTFQDCVPGRR
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mRNA from alignment at LSalAtl2s1222:82149..82639-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001316-697163 ID=EMLSAT00000001316-697163|Name=EMLSAT00000001316|organism=Lepeophtheirus salmonis|type=mRNA|length=491bp|location=Sequence derived from alignment at LSalAtl2s1222:82149..82639- (Lepeophtheirus salmonis)
ATGTCTCGTGGAATGAGTTGTAATTTAGATCTGAAGCTTAATCAATCCTA
TTCACAGTGTCCGGATGAATTTGGCAACGCATCATTCCTGAGTAATCCGA
CTCGGTTGGAACTTTTGATGTCCAGAGTTCAAACATTAGTTCAACAATCA
AATGAGCTGAGTAAAAATGTATTTTTTTGAGATTATAAAGAAACTCCTTT
AATTACAATTATGTTTCATGAATCTTTTTAATTTAGGAAATGGAAATGCT
TCAAGCTTTGAGAGCGACCCTTATATCCTGTGTTGAGGAAATGATTGCTG
CTATTGAGGCGGAAATAACAAAAAATCAAGACTTGAGATGTAATACAATT
AAAAATGCTCAGAAAATTATTCAGGATAGATTTCATTCGATTAAGCCTGA
CGAAGATGAACTCAAGGGGTTTTCATCAGAATTGCAACTTTTTATTCGGG
ATGTTGATACGTTTCAAGACTGCGTCCCTGGACGTAGATAA
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