60s ribosomal protein l27, maker-scaffold1323_size47899-snap-gene-0.17 (gene) Tigriopus kingsejongensis

Overview
Name60s ribosomal protein l27
Unique Namemaker-scaffold1323_size47899-snap-gene-0.17
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of 60s ribosomal protein l27 vs. L. salmonis genes
Match: EMLSAG00000005005 (supercontig:LSalAtl2s:LSalAtl2s260:403367:403765:1 gene:EMLSAG00000005005 transcript:EMLSAT00000005005 description:"augustus_masked-LSalAtl2s260-processed-gene-4.5")

HSP 1 Score: 219.935 bits (559), Expect = 1.039e-75
Identity = 101/132 (76.52%), Postives = 121/132 (91.67%), Query Frame = 0 
Query:    5 MKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136
            M+SG++V+VLSGRFAGRKAVIV+PTDEG  +KPFGHAL+AG+DRYPR VTKRMSKKK+K RSKIKPFLKV+NYNH+MPTRY+VDI FDK ++NKE LKDPMKKKKAR +VR  FEE+YK+G ++WFFQ+LRF
Sbjct:    1 MRSGRIVVVLSGRFAGRKAVIVRPTDEGNGEKPFGHALVAGVDRYPRKVTKRMSKKKVKQRSKIKPFLKVLNYNHLMPTRYNVDIKFDKESINKEVLKDPMKKKKARQLVRNDFEEKYKSGNSKWFFQRLRF 132
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BLAST of 60s ribosomal protein l27 vs. L. salmonis genes
Match: EMLSAG00000010695 (supercontig:LSalAtl2s:LSalAtl2s709:143943:144283:1 gene:EMLSAG00000010695 transcript:EMLSAT00000010695 description:"maker-LSalAtl2s709-snap-gene-1.3")

HSP 1 Score: 67.781 bits (164), Expect = 4.016e-16
Identity = 46/119 (38.66%), Postives = 60/119 (50.42%), Query Frame = 0 
Query:    1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGID-RYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQF 118
            M KIM+SG++V+VLS     R++VIV+PT    A +   H     +    P I     S   I                H+MP RY+V I FDK  +NK+ LKDPMKKKKA  +V   F
Sbjct:    1 MAKIMRSGRIVVVLSEHIVCRQSVIVRPTK---AIRRCSHRWCGTLSTNAPGINLSSRSSTTI----------------HLMPIRYNVHIKFDKEFINKQILKDPMKKKKAGQLVPNDF 100
[Close]
BLAST of 60s ribosomal protein l27 vs. L. salmonis genes
Match: EMLSAG00000009106 (supercontig:LSalAtl2s:LSalAtl2s573:376010:378859:-1 gene:EMLSAG00000009106 transcript:EMLSAT00000009106 description:"snap_masked-LSalAtl2s573-processed-gene-3.5")

HSP 1 Score: 63.929 bits (154), Expect = 2.611e-14
Identity = 30/55 (54.55%), Postives = 45/55 (81.82%), Query Frame = 0 
Query:   55 KRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKK 109
            K MSKK++K RSKIK FLKV++ NH+MP+RY++ I FDK ++NKE +K+  K+++
Sbjct:    2 KCMSKKRVKTRSKIKIFLKVIDNNHLMPSRYNLVIKFDKESVNKEVVKETTKRRR 56
[Close]
BLAST of 60s ribosomal protein l27 vs. L. salmonis genes
Match: EMLSAG00000008855 (supercontig:LSalAtl2s:LSalAtl2s552:66828:67919:-1 gene:EMLSAG00000008855 transcript:EMLSAT00000008855 description:"snap-LSalAtl2s552-processed-gene-0.37")

HSP 1 Score: 60.077 bits (144), Expect = 7.876e-13
Identity = 26/53 (49.06%), Postives = 38/53 (71.70%), Query Frame = 0 
Query:   81 MPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQK 133
            MPTRY+VD  FDK ++N + LKD M+ K+ R +V   F+ +YK G+ +WFF+K
Sbjct:    1 MPTRYNVDSNFDKESINLDVLKDTMEMKEGRQLVCNDFDNKYKYGRIKWFFEK 53
[Close]
BLAST of 60s ribosomal protein l27 vs. L. salmonis genes
Match: EMLSAG00000008229 (supercontig:LSalAtl2s:LSalAtl2s496:465796:466133:-1 gene:EMLSAG00000008229 transcript:EMLSAT00000008229 description:"maker-LSalAtl2s496-snap-gene-4.4")

HSP 1 Score: 55.4546 bits (132), Expect = 1.827e-11
Identity = 28/70 (40.00%), Postives = 42/70 (60.00%), Query Frame = 0 
Query:   67 KIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136
            K+K FLKV+ YNH++ T Y+V I   + ++NKE LK  M  K     V   FE++  +G ++ F Q+LR 
Sbjct:   15 KVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
[Close]
BLAST of 60s ribosomal protein l27 vs. L. salmonis genes
Match: EMLSAG00000006010 (supercontig:LSalAtl2s:LSalAtl2s326:412759:435794:-1 gene:EMLSAG00000006010 transcript:EMLSAT00000006010 description:"snap_masked-LSalAtl2s326-processed-gene-4.1")

HSP 1 Score: 49.2914 bits (116), Expect = 5.686e-9
Identity = 21/37 (56.76%), Postives = 28/37 (75.68%), Query Frame = 0 
Query:    1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKP 37
            M +IM+SG++V+ LSG FAG KA IV+PTDE   + P
Sbjct:   47 MGRIMRSGRIVMALSGHFAGCKAXIVRPTDEENGENP 83
[Close]
BLAST of 60s ribosomal protein l27 vs. L. salmonis genes
Match: EMLSAG00000000213 (supercontig:LSalAtl2s:LSalAtl2s1030:53525:53767:-1 gene:EMLSAG00000000213 transcript:EMLSAT00000000213 description:"maker-LSalAtl2s1030-snap-gene-0.1")

HSP 1 Score: 43.5134 bits (101), Expect = 5.584e-7
Identity = 25/54 (46.30%), Postives = 32/54 (59.26%), Query Frame = 0 
Query:   45 GIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNK 98
            G D YPR V +         RSK   F KV+NYN++M T Y+VDI FDK ++ K
Sbjct:   11 GGDFYPRKVGE--------TRSKCMSFHKVLNYNNLMHTCYNVDIEFDKESIGK 56
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BLAST of 60s ribosomal protein l27 vs. SwissProt
Match: gi|47117189|sp|Q7ZV82.3|RL27_DANRE (RecName: Full=60S ribosomal protein L27)

HSP 1 Score: 195.282 bits (495), Expect = 1.979e-64
Identity = 95/136 (69.85%), Postives = 111/136 (81.62%), Query Frame = 0 
Query:    1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136
            M K MK GKVV+VL+GR+AGRKAVIVK  D+GTAD+P+ HAL+AGIDRYPR VT  M KKKI  RSKIK F+KV NYNH+MPTRYSVDI  DK  +NK+  +DP  K+KAR   +V+FEERYKTGKN+WFFQKLRF
Sbjct:    1 MGKFMKPGKVVMVLAGRYAGRKAVIVKNIDDGTADRPYSHALVAGIDRYPRKVTATMGKKKIAKRSKIKAFVKVFNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
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BLAST of 60s ribosomal protein l27 vs. SwissProt
Match: gi|47117102|sp|P61359.2|RL27_HIPCM (RecName: Full=60S ribosomal protein L27)

HSP 1 Score: 194.126 bits (492), Expect = 6.465e-64
Identity = 95/136 (69.85%), Postives = 110/136 (80.88%), Query Frame = 0 
Query:    1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136
            M K MK GKVV+VL+GR+AGRKAVIVK  D+GTAD+P+ HAL+AGIDRYPR VT  M KKKI  RSKIK F+KV NYNH+MPTRYSVDI  DK  +NK+  +DP  K KAR   +V+FEERYKTGKN+WFFQKLRF
Sbjct:    1 MGKFMKPGKVVMVLAGRYAGRKAVIVKNIDDGTADRPYSHALVAGIDRYPRKVTAPMGKKKIAKRSKIKAFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKSKARREAKVKFEERYKTGKNKWFFQKLRF 136
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BLAST of 60s ribosomal protein l27 vs. SwissProt
Match: gi|47117099|sp|P61356.2|RL27_BOVIN (RecName: Full=60S ribosomal protein L27 >gi|47117100|sp|P61357.2|RL27_CERNI RecName: Full=60S ribosomal protein L27 >gi|47117101|sp|P61358.2|RL27_MOUSE RecName: Full=60S ribosomal protein L27 >gi|47117737|sp|P61354.2|RL27_RAT RecName: Full=60S ribosomal protein L27 >gi|47117772|sp|P61353.2|RL27_HUMAN RecName: Full=60S ribosomal protein L27; AltName: Full=Large ribosomal subunit protein eL27 >gi|47117773|sp|P61355.2|RL27_CHICK RecName: Full=60S ribosomal protein L27 >gi|75077221|sp|Q4R8Z4.1|RL27_MACFA RecName: Full=60S ribosomal protein L27 >gi|158514031|sp|A1XQU5.1|RL27_PIG RecName: Full=60S ribosomal protein L27)

HSP 1 Score: 194.126 bits (492), Expect = 6.681e-64
Identity = 94/136 (69.12%), Postives = 111/136 (81.62%), Query Frame = 0 
Query:    1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136
            M K MK GKVVLVL+GR++GRKAVIVK  D+GT+D+P+ HAL+AGIDRYPR VT  M KKKI  RSKIK F+KV NYNH+MPTRYSVDI  DK  +NK+  +DP  K+KAR   +V+FEERYKTGKN+WFFQKLRF
Sbjct:    1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
[Close]
BLAST of 60s ribosomal protein l27 vs. SwissProt
Match: gi|47117269|sp|Q90YU1.3|RL27_ICTPU (RecName: Full=60S ribosomal protein L27)

HSP 1 Score: 193.356 bits (490), Expect = 1.262e-63
Identity = 93/136 (68.38%), Postives = 111/136 (81.62%), Query Frame = 0 
Query:    1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136
            M K MK GKVV+VL+GR+AGRKAVIVK  D+GTAD+P+ HAL++GIDRYPR VT  M KKK+  RSKIK F+KV NYNH+MPTRYSVDI  DK  +NK+  +DP  K+KAR   +V+FEERYKTGKN+WFFQKLRF
Sbjct:    1 MGKFMKPGKVVMVLAGRYAGRKAVIVKNIDDGTADRPYSHALVSGIDRYPRKVTATMGKKKVAKRSKIKAFVKVFNYNHLMPTRYSVDIPLDKTIVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
[Close]
BLAST of 60s ribosomal protein l27 vs. SwissProt
Match: gi|62901064|sp|Q9XSU7.3|RL27_CANFA (RecName: Full=60S ribosomal protein L27)

HSP 1 Score: 192.586 bits (488), Expect = 2.572e-63
Identity = 93/136 (68.38%), Postives = 111/136 (81.62%), Query Frame = 0 
Query:    1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136
            M K MK GKVVLVL+GR++GRKAVIVK  D+GT+D+P+ HAL+AGIDRYPR VT  M KKKI  RSKIK F+KV NYNH+MPTRYSVDI  DK  +NK+  +DP  K+KAR   +V+FEE+YKTGKN+WFFQKLRF
Sbjct:    1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEEKYKTGKNKWFFQKLRF 136
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BLAST of 60s ribosomal protein l27 vs. SwissProt
Match: gi|2829752|sp|P91914.1|RL27_CAEEL (RecName: Full=60S ribosomal protein L27)

HSP 1 Score: 190.66 bits (483), Expect = 1.346e-62
Identity = 92/136 (67.65%), Postives = 112/136 (82.35%), Query Frame = 0 
Query:    1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136
            M KIMK GKVVLVL G++AGRKAV+VK  DEG +D+ + HA++AGIDRYP  VTK M KKKI+ R+K+KPFLKVV+Y H++PTRYSVD+ FDK N+NKE LK P KK+KA   V+ +FEERYKTGKN+WFF KLRF
Sbjct:    1 MGKIMKPGKVVLVLRGKYAGRKAVVVKQQDEGVSDRTYPHAIIAGIDRYPLKVTKDMGKKKIEKRNKLKPFLKVVSYTHLLPTRYSVDVAFDKTNINKEALKAPSKKRKALVEVKSKFEERYKTGKNKWFFTKLRF 136
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BLAST of 60s ribosomal protein l27 vs. SwissProt
Match: gi|134039201|sp|P0C2H7.1|RL27B_YEAST (RecName: Full=60S ribosomal protein L27-B; AltName: Full=Large ribosomal subunit protein eL27-B)

HSP 1 Score: 170.629 bits (431), Expect = 1.310e-54
Identity = 75/136 (55.15%), Postives = 107/136 (78.68%), Query Frame = 0 
Query:    1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136
            M K +K+GKV +V+ GR+AG+K VIVKP DEG+   PFGHAL+AGI+RYP  VTK+   KK+  R+KIKPF+KVVNYNH++PTRY++D+   K+ ++ ET + P ++++A+ +V+  FEER++ GKN+WFF KLRF
Sbjct:    1 MAKFLKAGKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHALVAGIERYPSKVTKKHGAKKVAKRTKIKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKKAFEERHQAGKNQWFFSKLRF 136
[Close]
BLAST of 60s ribosomal protein l27 vs. SwissProt
Match: gi|134039200|sp|P0C2H6.1|RL27A_YEAST (RecName: Full=60S ribosomal protein L27-A; AltName: Full=Large ribosomal subunit protein eL27-A)

HSP 1 Score: 169.859 bits (429), Expect = 2.699e-54
Identity = 75/136 (55.15%), Postives = 107/136 (78.68%), Query Frame = 0 
Query:    1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136
            M K +K+GKV +V+ GR+AG+K VIVKP DEG+   PFGHAL+AGI+RYP  VTK+   KK+  R+KIKPF+KVVNYNH++PTRY++D+   K+ ++ ET + P ++++A+ +V+  FEER++ GKN+WFF KLRF
Sbjct:    1 MAKFLKAGKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHALVAGIERYPLKVTKKHGAKKVAKRTKIKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKKAFEERHQAGKNQWFFSKLRF 136
[Close]
BLAST of 60s ribosomal protein l27 vs. SwissProt
Match: gi|400991|sp|Q02984.1|RL27_PYRST (RecName: Full=60S ribosomal protein L27)

HSP 1 Score: 160.999 bits (406), Expect = 8.183e-51
Identity = 77/136 (56.62%), Postives = 103/136 (75.74%), Query Frame = 0 
Query:    1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136
            MVK +KSGKVV+VLSGRFAG+KAVIV+  D+GT+ +P+GHAL+ G+ + PR VTKR S+KK   +S +K F+K VNYNH+MPTRY++D+ F    +  E  ++P KK +AR   +   EE++KTGKNRWFF KLRF
Sbjct:    1 MVKFLKSGKVVVVLSGRFAGKKAVIVRNFDDGTSSRPYGHALVVGLQKEPRKVTKRQSQKKQAKKSTLKTFIKTVNYNHLMPTRYTLDVDFK--GVAAEAQENPTKKVEARKECKKLLEEKFKTGKNRWFFTKLRF 134
[Close]
BLAST of 60s ribosomal protein l27 vs. SwissProt
Match: gi|6174937|sp|O14388.2|RL27A_SCHPO (RecName: Full=60S ribosomal protein L27-A)

HSP 1 Score: 160.229 bits (404), Expect = 1.522e-50
Identity = 71/136 (52.21%), Postives = 101/136 (74.26%), Query Frame = 0 
Query:    1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136
            MVKI+K GKV L+  GRFAG+K VI++  D+G+   PFGHA++AG++RYP  VTK M  K+I  RS++KPF+KVVNYNH+MPTRY++++   K  +  +T K+P ++  AR  V+  FEE+Y++GK+ WFF  LRF
Sbjct:    1 MVKILKPGKVALITRGRFAGKKVVILQAIDQGSKSHPFGHAVVAGVERYPLKVTKSMGAKRIARRSRVKPFIKVVNYNHLMPTRYALELDNLKGLITADTFKEPTQRSAARKTVKKTFEEKYQSGKSAWFFTPLRF 136
[Close]
BLAST of 60s ribosomal protein l27 vs. nr
Match: gi|762078681|ref|XP_011455219.1| (PREDICTED: 60S ribosomal protein L27 [Crassostrea gigas] >gi|1139747788|ref|XP_019930636.1| PREDICTED: 60S ribosomal protein L27 [Crassostrea gigas] >gi|1242845591|ref|XP_022304138.1| 60S ribosomal protein L27 [Crassostrea virginica])

HSP 1 Score: 202.216 bits (513), Expect = 1.063e-64
Identity = 97/136 (71.32%), Postives = 115/136 (84.56%), Query Frame = 0 
Query:    1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136
            M K MK GKVVLVLSGRFAGRKAVIVK  D+GT DKP+GHAL+AGIDRYPR VT++M KKK+K RSK+K FL+V NYNH+MPTRYSVD+  DK+ +NK+  +DP  K+KAR  V+ +FEERYKTGKN+WFFQKLRF
Sbjct:    1 MGKFMKPGKVVLVLSGRFAGRKAVIVKNHDDGTQDKPYGHALVAGIDRYPRKVTRKMGKKKMKDRSKLKAFLRVYNYNHLMPTRYSVDVNLDKSAVNKDAFRDPALKRKARRDVKAKFEERYKTGKNKWFFQKLRF 136
[Close]
BLAST of 60s ribosomal protein l27 vs. nr
Match: gi|188572443|gb|ACD65128.1| (putative 60S ribosomal protein RPL27 [Novocrania anomala])

HSP 1 Score: 200.675 bits (509), Expect = 4.827e-64
Identity = 96/136 (70.59%), Postives = 114/136 (83.82%), Query Frame = 0 
Query:    1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136
            M K MKSGKVVLVL GRFAGRKAVIVK  DEGT+DK +GHAL+AG+DRYPR VTKRM KKK+  RSK+K F+KV NYNH+MPTRYSVD+  DKA +NK+  +DP  ++KAR   +++FEERYKTGKN+WFFQKLRF
Sbjct:    1 MGKFMKSGKVVLVLGGRFAGRKAVIVKNYDEGTSDKQYGHALVAGVDRYPRKVTKRMGKKKVSQRSKLKAFVKVFNYNHLMPTRYSVDVPLDKALVNKDAFRDPGLRRKARREAKMKFEERYKTGKNKWFFQKLRF 136
[Close]
BLAST of 60s ribosomal protein l27 vs. nr
Match: gi|1204717532|gb|OWA54696.1| (60S ribosomal protein L27 [Hypsibius dujardini])

HSP 1 Score: 199.134 bits (505), Expect = 2.051e-63
Identity = 94/136 (69.12%), Postives = 115/136 (84.56%), Query Frame = 0 
Query:    1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136
            MVKIMK GKVVL+LSG++AGRKAV++K  DEG+ DK +GHAL+AGIDRYPR VTK M KKKI  RS+IKPF+KVVNYNH+MPTRYSVDI F+K  +N++  +D   ++KAR+ VR +FEERYKTGKN+WFF KLRF
Sbjct:    1 MVKIMKGGKVVLILSGKYAGRKAVVIKNYDEGSGDKQYGHALVAGIDRYPRKVTKTMGKKKIAKRSRIKPFVKVVNYNHVMPTRYSVDIAFEKNVVNRDAFRDQALRRKARSEVRKKFEERYKTGKNKWFFTKLRF 136
[Close]
BLAST of 60s ribosomal protein l27 vs. nr
Match: gi|1209693254|gb|OWR46764.1| (ribosomal protein L27 [Danaus plexippus plexippus])

HSP 1 Score: 198.749 bits (504), Expect = 2.420e-63
Identity = 99/136 (72.79%), Postives = 114/136 (83.82%), Query Frame = 0 
Query:    1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136
            M KIMK GKVVLVLSGR+AGRKA++VK  DEGT+DKP+GHA +AGIDRYPR V KRM K KI  RSKIKPF+KVVNYNH+MPTRYSVD  F+K  L+ + LKDP K+KK R   RV+FEERYK+GKN+WFFQKLRF
Sbjct:    1 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYSVDFSFEK--LSTKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 134
[Close]
BLAST of 60s ribosomal protein l27 vs. nr
Match: gi|1274138874|ref|XP_022814138.1| (60S ribosomal protein L27 [Spodoptera litura] >gi|1274138876|ref|XP_022814139.1| 60S ribosomal protein L27 [Spodoptera litura] >gi|15213776|gb|AAK92163.1|AF400191_1 ribosomal protein L27 [Spodoptera frugiperda])

HSP 1 Score: 198.749 bits (504), Expect = 2.916e-63
Identity = 98/136 (72.06%), Postives = 113/136 (83.09%), Query Frame = 0 
Query:    1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136
            M KIMK GKVVLVLSGR+AGRKA++VK  DEGT+DKP+GHA +AGIDRYPR V KRM K KI  RSK+KPF+KVVNYNH+MPTRYSVD  FDK   + + LKDP K+KK R   RV+FEERYK+GKN+WFFQKLRF
Sbjct:    1 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKVKPFVKVVNYNHLMPTRYSVDFSFDK--FSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 134
The following BLAST results are available for this feature:
BLAST of 60s ribosomal protein l27 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 7
Match NameE-valueIdentityDescription
EMLSAG000000050051.039e-7576.52supercontig:LSalAtl2s:LSalAtl2s260:403367:403765:1... [more]
EMLSAG000000106954.016e-1638.66supercontig:LSalAtl2s:LSalAtl2s709:143943:144283:1... [more]
EMLSAG000000091062.611e-1454.55supercontig:LSalAtl2s:LSalAtl2s573:376010:378859:-... [more]
EMLSAG000000088557.876e-1349.06supercontig:LSalAtl2s:LSalAtl2s552:66828:67919:-1 ... [more]
EMLSAG000000082291.827e-1140.00supercontig:LSalAtl2s:LSalAtl2s496:465796:466133:-... [more]
EMLSAG000000060105.686e-956.76supercontig:LSalAtl2s:LSalAtl2s326:412759:435794:-... [more]
EMLSAG000000002135.584e-746.30supercontig:LSalAtl2s:LSalAtl2s1030:53525:53767:-1... [more]
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BLAST of 60s ribosomal protein l27 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
gi|47117189|sp|Q7ZV82.3|RL27_DANRE1.979e-6469.85RecName: Full=60S ribosomal protein L27[more]
gi|47117102|sp|P61359.2|RL27_HIPCM6.465e-6469.85RecName: Full=60S ribosomal protein L27[more]
gi|47117099|sp|P61356.2|RL27_BOVIN6.681e-6469.12RecName: Full=60S ribosomal protein L27 >gi|471171... [more]
gi|47117269|sp|Q90YU1.3|RL27_ICTPU1.262e-6368.38RecName: Full=60S ribosomal protein L27[more]
gi|62901064|sp|Q9XSU7.3|RL27_CANFA2.572e-6368.38RecName: Full=60S ribosomal protein L27[more]
gi|2829752|sp|P91914.1|RL27_CAEEL1.346e-6267.65RecName: Full=60S ribosomal protein L27[more]
gi|134039201|sp|P0C2H7.1|RL27B_YEAST1.310e-5455.15RecName: Full=60S ribosomal protein L27-B; AltName... [more]
gi|134039200|sp|P0C2H6.1|RL27A_YEAST2.699e-5455.15RecName: Full=60S ribosomal protein L27-A; AltName... [more]
gi|400991|sp|Q02984.1|RL27_PYRST8.183e-5156.62RecName: Full=60S ribosomal protein L27[more]
gi|6174937|sp|O14388.2|RL27A_SCHPO1.522e-5052.21RecName: Full=60S ribosomal protein L27-A[more]

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BLAST of 60s ribosomal protein l27 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|762078681|ref|XP_011455219.1|1.063e-6471.32PREDICTED: 60S ribosomal protein L27 [Crassostrea ... [more]
gi|188572443|gb|ACD65128.1|4.827e-6470.59putative 60S ribosomal protein RPL27 [Novocrania a... [more]
gi|1204717532|gb|OWA54696.1|2.051e-6369.1260S ribosomal protein L27 [Hypsibius dujardini][more]
gi|1209693254|gb|OWR46764.1|2.420e-6372.79ribosomal protein L27 [Danaus plexippus plexippus][more]
gi|1274138874|ref|XP_022814138.1|2.916e-6372.0660S ribosomal protein L27 [Spodoptera litura] >gi|... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1323_size47899supercontigscaffold1323_size47899:30981..31760 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteC:ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold1323_size47899-snap-gene-0.17-mRNA-1maker-scaffold1323_size47899-snap-gene-0.17-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold1323_size47899:30981..31760-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1323_size47899-snap-gene-0.17 ID=maker-scaffold1323_size47899-snap-gene-0.17|Name=60s ribosomal protein l27|organism=Tigriopus kingsejongensis|type=gene|length=780bp|location=Sequence derived from alignment at scaffold1323_size47899:30981..31760- (Tigriopus kingsejongensis)
TTTTCCTGTCCACCTTCGGAAGTTTGAGGCGAGGTGAATCTTTCTCTCGC
TCGGCAAGATGGTGAAAATAATGAAATCTGGCAAGGTGGTCCTTGTCCTG
TCCGGTCGATTTGCCGGCAGGAAGGCCGTCATCGTCAAGCCCACGGACGA
AGGCACCGCTGACAAGCCCTTCGGACACGCTTTGTTGGCCGGTATCGACC
GATATCCTCGTATCGTGACCAAGCGCATGTCCAAGAAGAAGATCAAGATG
CGCTCCAAGATCAAGCCCTTCTTGAAGGTATGTCCAACTCGGGGCGGTCG
ATGGGGTCCTTGGACCTTCCAACTGTGCCGCCGAAGTAGGGATTGGAACT
CTCATTTCATTGAATGTGATCCACCTCGGTGTACCTGGGTGAAACGTGCT
TACATTGAGGGAGGAGGGAGTGAGGGCTCGAATAGCTAGATTGCCGCCCA
GTTTGAAACCAGGCGACCCGAGTGGTCAGGTGTGGCACGATGACCCTCTC
TGGAAGTGGCCACGAGCCTTGAGAAGGACTCATTCGTTTAATTTCGGCTT
GCAGGTGGTCAACTACAACCATATGATGCCCACCCGATACAGTGTGGACA
TCGGTTTCGACAAGGCCAACCTGAACAAGGAGACCTTGAAGGACCCCATG
AAGAAGAAGAAGGCCCGCAACATGGTCCGAGTTCAGTTTGAGGAACGCTA
CAAAACGGGCAAAAATAGGTGGTTCTTCCAGAAGCTGAGATTCTAAGCGT
TGGCTCTTCGACTTCATGGCGAACATGTTG
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Synonyms
The feature '60s ribosomal protein l27' has the following synonyms
Synonym
Tk03421
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