60s ribosomal protein l27, maker-scaffold1323_size47899-snap-gene-0.17 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of 60s ribosomal protein l27 vs. L. salmonis genes
Match: EMLSAG00000005005 (supercontig:LSalAtl2s:LSalAtl2s260:403367:403765:1 gene:EMLSAG00000005005 transcript:EMLSAT00000005005 description:"augustus_masked-LSalAtl2s260-processed-gene-4.5") HSP 1 Score: 219.935 bits (559), Expect = 1.039e-75 Identity = 101/132 (76.52%), Postives = 121/132 (91.67%), Query Frame = 0 Query: 5 MKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 M+SG++V+VLSGRFAGRKAVIV+PTDEG +KPFGHAL+AG+DRYPR VTKRMSKKK+K RSKIKPFLKV+NYNH+MPTRY+VDI FDK ++NKE LKDPMKKKKAR +VR FEE+YK+G ++WFFQ+LRF Sbjct: 1 MRSGRIVVVLSGRFAGRKAVIVRPTDEGNGEKPFGHALVAGVDRYPRKVTKRMSKKKVKQRSKIKPFLKVLNYNHLMPTRYNVDIKFDKESINKEVLKDPMKKKKARQLVRNDFEEKYKSGNSKWFFQRLRF 132
BLAST of 60s ribosomal protein l27 vs. L. salmonis genes
Match: EMLSAG00000010695 (supercontig:LSalAtl2s:LSalAtl2s709:143943:144283:1 gene:EMLSAG00000010695 transcript:EMLSAT00000010695 description:"maker-LSalAtl2s709-snap-gene-1.3") HSP 1 Score: 67.781 bits (164), Expect = 4.016e-16 Identity = 46/119 (38.66%), Postives = 60/119 (50.42%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGID-RYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQF 118 M KIM+SG++V+VLS R++VIV+PT A + H + P I S I H+MP RY+V I FDK +NK+ LKDPMKKKKA +V F Sbjct: 1 MAKIMRSGRIVVVLSEHIVCRQSVIVRPTK---AIRRCSHRWCGTLSTNAPGINLSSRSSTTI----------------HLMPIRYNVHIKFDKEFINKQILKDPMKKKKAGQLVPNDF 100
BLAST of 60s ribosomal protein l27 vs. L. salmonis genes
Match: EMLSAG00000009106 (supercontig:LSalAtl2s:LSalAtl2s573:376010:378859:-1 gene:EMLSAG00000009106 transcript:EMLSAT00000009106 description:"snap_masked-LSalAtl2s573-processed-gene-3.5") HSP 1 Score: 63.929 bits (154), Expect = 2.611e-14 Identity = 30/55 (54.55%), Postives = 45/55 (81.82%), Query Frame = 0 Query: 55 KRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKK 109 K MSKK++K RSKIK FLKV++ NH+MP+RY++ I FDK ++NKE +K+ K+++ Sbjct: 2 KCMSKKRVKTRSKIKIFLKVIDNNHLMPSRYNLVIKFDKESVNKEVVKETTKRRR 56
BLAST of 60s ribosomal protein l27 vs. L. salmonis genes
Match: EMLSAG00000008855 (supercontig:LSalAtl2s:LSalAtl2s552:66828:67919:-1 gene:EMLSAG00000008855 transcript:EMLSAT00000008855 description:"snap-LSalAtl2s552-processed-gene-0.37") HSP 1 Score: 60.077 bits (144), Expect = 7.876e-13 Identity = 26/53 (49.06%), Postives = 38/53 (71.70%), Query Frame = 0 Query: 81 MPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQK 133 MPTRY+VD FDK ++N + LKD M+ K+ R +V F+ +YK G+ +WFF+K Sbjct: 1 MPTRYNVDSNFDKESINLDVLKDTMEMKEGRQLVCNDFDNKYKYGRIKWFFEK 53
BLAST of 60s ribosomal protein l27 vs. L. salmonis genes
Match: EMLSAG00000008229 (supercontig:LSalAtl2s:LSalAtl2s496:465796:466133:-1 gene:EMLSAG00000008229 transcript:EMLSAT00000008229 description:"maker-LSalAtl2s496-snap-gene-4.4") HSP 1 Score: 55.4546 bits (132), Expect = 1.827e-11 Identity = 28/70 (40.00%), Postives = 42/70 (60.00%), Query Frame = 0 Query: 67 KIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 K+K FLKV+ YNH++ T Y+V I + ++NKE LK M K V FE++ +G ++ F Q+LR Sbjct: 15 KVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
BLAST of 60s ribosomal protein l27 vs. L. salmonis genes
Match: EMLSAG00000006010 (supercontig:LSalAtl2s:LSalAtl2s326:412759:435794:-1 gene:EMLSAG00000006010 transcript:EMLSAT00000006010 description:"snap_masked-LSalAtl2s326-processed-gene-4.1") HSP 1 Score: 49.2914 bits (116), Expect = 5.686e-9 Identity = 21/37 (56.76%), Postives = 28/37 (75.68%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKP 37 M +IM+SG++V+ LSG FAG KA IV+PTDE + P Sbjct: 47 MGRIMRSGRIVMALSGHFAGCKAXIVRPTDEENGENP 83
BLAST of 60s ribosomal protein l27 vs. L. salmonis genes
Match: EMLSAG00000000213 (supercontig:LSalAtl2s:LSalAtl2s1030:53525:53767:-1 gene:EMLSAG00000000213 transcript:EMLSAT00000000213 description:"maker-LSalAtl2s1030-snap-gene-0.1") HSP 1 Score: 43.5134 bits (101), Expect = 5.584e-7 Identity = 25/54 (46.30%), Postives = 32/54 (59.26%), Query Frame = 0 Query: 45 GIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNK 98 G D YPR V + RSK F KV+NYN++M T Y+VDI FDK ++ K Sbjct: 11 GGDFYPRKVGE--------TRSKCMSFHKVLNYNNLMHTCYNVDIEFDKESIGK 56
BLAST of 60s ribosomal protein l27 vs. SwissProt
Match: gi|47117189|sp|Q7ZV82.3|RL27_DANRE (RecName: Full=60S ribosomal protein L27) HSP 1 Score: 195.282 bits (495), Expect = 1.979e-64 Identity = 95/136 (69.85%), Postives = 111/136 (81.62%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 M K MK GKVV+VL+GR+AGRKAVIVK D+GTAD+P+ HAL+AGIDRYPR VT M KKKI RSKIK F+KV NYNH+MPTRYSVDI DK +NK+ +DP K+KAR +V+FEERYKTGKN+WFFQKLRF Sbjct: 1 MGKFMKPGKVVMVLAGRYAGRKAVIVKNIDDGTADRPYSHALVAGIDRYPRKVTATMGKKKIAKRSKIKAFVKVFNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
BLAST of 60s ribosomal protein l27 vs. SwissProt
Match: gi|47117102|sp|P61359.2|RL27_HIPCM (RecName: Full=60S ribosomal protein L27) HSP 1 Score: 194.126 bits (492), Expect = 6.465e-64 Identity = 95/136 (69.85%), Postives = 110/136 (80.88%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 M K MK GKVV+VL+GR+AGRKAVIVK D+GTAD+P+ HAL+AGIDRYPR VT M KKKI RSKIK F+KV NYNH+MPTRYSVDI DK +NK+ +DP K KAR +V+FEERYKTGKN+WFFQKLRF Sbjct: 1 MGKFMKPGKVVMVLAGRYAGRKAVIVKNIDDGTADRPYSHALVAGIDRYPRKVTAPMGKKKIAKRSKIKAFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKSKARREAKVKFEERYKTGKNKWFFQKLRF 136
BLAST of 60s ribosomal protein l27 vs. SwissProt
Match: gi|47117099|sp|P61356.2|RL27_BOVIN (RecName: Full=60S ribosomal protein L27 >gi|47117100|sp|P61357.2|RL27_CERNI RecName: Full=60S ribosomal protein L27 >gi|47117101|sp|P61358.2|RL27_MOUSE RecName: Full=60S ribosomal protein L27 >gi|47117737|sp|P61354.2|RL27_RAT RecName: Full=60S ribosomal protein L27 >gi|47117772|sp|P61353.2|RL27_HUMAN RecName: Full=60S ribosomal protein L27; AltName: Full=Large ribosomal subunit protein eL27 >gi|47117773|sp|P61355.2|RL27_CHICK RecName: Full=60S ribosomal protein L27 >gi|75077221|sp|Q4R8Z4.1|RL27_MACFA RecName: Full=60S ribosomal protein L27 >gi|158514031|sp|A1XQU5.1|RL27_PIG RecName: Full=60S ribosomal protein L27) HSP 1 Score: 194.126 bits (492), Expect = 6.681e-64 Identity = 94/136 (69.12%), Postives = 111/136 (81.62%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 M K MK GKVVLVL+GR++GRKAVIVK D+GT+D+P+ HAL+AGIDRYPR VT M KKKI RSKIK F+KV NYNH+MPTRYSVDI DK +NK+ +DP K+KAR +V+FEERYKTGKN+WFFQKLRF Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
BLAST of 60s ribosomal protein l27 vs. SwissProt
Match: gi|47117269|sp|Q90YU1.3|RL27_ICTPU (RecName: Full=60S ribosomal protein L27) HSP 1 Score: 193.356 bits (490), Expect = 1.262e-63 Identity = 93/136 (68.38%), Postives = 111/136 (81.62%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 M K MK GKVV+VL+GR+AGRKAVIVK D+GTAD+P+ HAL++GIDRYPR VT M KKK+ RSKIK F+KV NYNH+MPTRYSVDI DK +NK+ +DP K+KAR +V+FEERYKTGKN+WFFQKLRF Sbjct: 1 MGKFMKPGKVVMVLAGRYAGRKAVIVKNIDDGTADRPYSHALVSGIDRYPRKVTATMGKKKVAKRSKIKAFVKVFNYNHLMPTRYSVDIPLDKTIVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
BLAST of 60s ribosomal protein l27 vs. SwissProt
Match: gi|62901064|sp|Q9XSU7.3|RL27_CANFA (RecName: Full=60S ribosomal protein L27) HSP 1 Score: 192.586 bits (488), Expect = 2.572e-63 Identity = 93/136 (68.38%), Postives = 111/136 (81.62%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 M K MK GKVVLVL+GR++GRKAVIVK D+GT+D+P+ HAL+AGIDRYPR VT M KKKI RSKIK F+KV NYNH+MPTRYSVDI DK +NK+ +DP K+KAR +V+FEE+YKTGKN+WFFQKLRF Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEEKYKTGKNKWFFQKLRF 136
BLAST of 60s ribosomal protein l27 vs. SwissProt
Match: gi|2829752|sp|P91914.1|RL27_CAEEL (RecName: Full=60S ribosomal protein L27) HSP 1 Score: 190.66 bits (483), Expect = 1.346e-62 Identity = 92/136 (67.65%), Postives = 112/136 (82.35%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 M KIMK GKVVLVL G++AGRKAV+VK DEG +D+ + HA++AGIDRYP VTK M KKKI+ R+K+KPFLKVV+Y H++PTRYSVD+ FDK N+NKE LK P KK+KA V+ +FEERYKTGKN+WFF KLRF Sbjct: 1 MGKIMKPGKVVLVLRGKYAGRKAVVVKQQDEGVSDRTYPHAIIAGIDRYPLKVTKDMGKKKIEKRNKLKPFLKVVSYTHLLPTRYSVDVAFDKTNINKEALKAPSKKRKALVEVKSKFEERYKTGKNKWFFTKLRF 136
BLAST of 60s ribosomal protein l27 vs. SwissProt
Match: gi|134039201|sp|P0C2H7.1|RL27B_YEAST (RecName: Full=60S ribosomal protein L27-B; AltName: Full=Large ribosomal subunit protein eL27-B) HSP 1 Score: 170.629 bits (431), Expect = 1.310e-54 Identity = 75/136 (55.15%), Postives = 107/136 (78.68%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 M K +K+GKV +V+ GR+AG+K VIVKP DEG+ PFGHAL+AGI+RYP VTK+ KK+ R+KIKPF+KVVNYNH++PTRY++D+ K+ ++ ET + P ++++A+ +V+ FEER++ GKN+WFF KLRF Sbjct: 1 MAKFLKAGKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHALVAGIERYPSKVTKKHGAKKVAKRTKIKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKKAFEERHQAGKNQWFFSKLRF 136
BLAST of 60s ribosomal protein l27 vs. SwissProt
Match: gi|134039200|sp|P0C2H6.1|RL27A_YEAST (RecName: Full=60S ribosomal protein L27-A; AltName: Full=Large ribosomal subunit protein eL27-A) HSP 1 Score: 169.859 bits (429), Expect = 2.699e-54 Identity = 75/136 (55.15%), Postives = 107/136 (78.68%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 M K +K+GKV +V+ GR+AG+K VIVKP DEG+ PFGHAL+AGI+RYP VTK+ KK+ R+KIKPF+KVVNYNH++PTRY++D+ K+ ++ ET + P ++++A+ +V+ FEER++ GKN+WFF KLRF Sbjct: 1 MAKFLKAGKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHALVAGIERYPLKVTKKHGAKKVAKRTKIKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKKAFEERHQAGKNQWFFSKLRF 136
BLAST of 60s ribosomal protein l27 vs. SwissProt
Match: gi|400991|sp|Q02984.1|RL27_PYRST (RecName: Full=60S ribosomal protein L27) HSP 1 Score: 160.999 bits (406), Expect = 8.183e-51 Identity = 77/136 (56.62%), Postives = 103/136 (75.74%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 MVK +KSGKVV+VLSGRFAG+KAVIV+ D+GT+ +P+GHAL+ G+ + PR VTKR S+KK +S +K F+K VNYNH+MPTRY++D+ F + E ++P KK +AR + EE++KTGKNRWFF KLRF Sbjct: 1 MVKFLKSGKVVVVLSGRFAGKKAVIVRNFDDGTSSRPYGHALVVGLQKEPRKVTKRQSQKKQAKKSTLKTFIKTVNYNHLMPTRYTLDVDFK--GVAAEAQENPTKKVEARKECKKLLEEKFKTGKNRWFFTKLRF 134
BLAST of 60s ribosomal protein l27 vs. SwissProt
Match: gi|6174937|sp|O14388.2|RL27A_SCHPO (RecName: Full=60S ribosomal protein L27-A) HSP 1 Score: 160.229 bits (404), Expect = 1.522e-50 Identity = 71/136 (52.21%), Postives = 101/136 (74.26%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 MVKI+K GKV L+ GRFAG+K VI++ D+G+ PFGHA++AG++RYP VTK M K+I RS++KPF+KVVNYNH+MPTRY++++ K + +T K+P ++ AR V+ FEE+Y++GK+ WFF LRF Sbjct: 1 MVKILKPGKVALITRGRFAGKKVVILQAIDQGSKSHPFGHAVVAGVERYPLKVTKSMGAKRIARRSRVKPFIKVVNYNHLMPTRYALELDNLKGLITADTFKEPTQRSAARKTVKKTFEEKYQSGKSAWFFTPLRF 136
BLAST of 60s ribosomal protein l27 vs. nr
Match: gi|961375780|gb|ALS04634.1| (60S ribosomal protein L27 [Pseudodiaptomus poplesia] >gi|961376052|gb|ALS04770.1| 60S ribosomal protein L27 [Pseudodiaptomus poplesia]) HSP 1 Score: 238.039 bits (606), Expect = 8.195e-79 Identity = 114/136 (83.82%), Postives = 128/136 (94.12%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 M KIMK+GKVVL+LSGR+AGRKAV+VKP+DEGT DKPF HAL+AGIDRYPR VTK+MSKK+I RSKIKPFLKVVNYNH++PTRYSVDI FDKAN+NKETLKDP KKKKARNMVR++FEE+YKTGKNRWFFQKLRF Sbjct: 1 MGKIMKAGKVVLLLSGRYAGRKAVVVKPSDEGTTDKPFSHALVAGIDRYPRKVTKKMSKKRITKRSKIKPFLKVVNYNHVLPTRYSVDIPFDKANINKETLKDPSKKKKARNMVRLKFEEKYKTGKNRWFFQKLRF 136
BLAST of 60s ribosomal protein l27 vs. nr
Match: gi|961376278|gb|ALS04883.1| (60S ribosomal protein L27 [Pseudodiaptomus poplesia]) HSP 1 Score: 234.572 bits (597), Expect = 1.786e-77 Identity = 111/132 (84.09%), Postives = 125/132 (94.70%), Query Frame = 0 Query: 5 MKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 MK+GKVVL+LSGR+AGRKAV+VKP+DEGT DKPF HAL+AGIDRYPR VTK+MSKK+I RSKIKPFLKVVNYNH++PTRYSVDI FDKAN+NKETLKDP KKKKARNMVR++FEE+YKTGKNRWFFQKLRF Sbjct: 1 MKAGKVVLLLSGRYAGRKAVVVKPSDEGTTDKPFSHALVAGIDRYPRKVTKKMSKKRITKRSKIKPFLKVVNYNHVLPTRYSVDIPFDKANINKETLKDPSKKKKARNMVRLKFEEKYKTGKNRWFFQKLRF 132
BLAST of 60s ribosomal protein l27 vs. nr
Match: gi|961375098|gb|ALS04293.1| (60S ribosomal protein L27 [Acartia pacifica] >gi|961375100|gb|ALS04294.1| 60S ribosomal protein L27 [Acartia pacifica] >gi|961375102|gb|ALS04295.1| 60S ribosomal protein L27 [Acartia pacifica] >gi|961375104|gb|ALS04296.1| 60S ribosomal protein L27 [Acartia pacifica] >gi|961375106|gb|ALS04297.1| 60S ribosomal protein L27 [Acartia pacifica]) HSP 1 Score: 226.868 bits (577), Expect = 2.138e-74 Identity = 108/136 (79.41%), Postives = 126/136 (92.65%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 M KI+K+GKVVL+LSGR+AGRKAV+VKP +EG++DKPF HAL+AGI+RYPR VTKRM+KKK++ RSKIKPFLKVVNYNH+MPTRYSVDI FDK+NLNKE LKDP KKK ARNMVRV+FEE+YK GKN+WFFQKLRF Sbjct: 1 MGKIIKAGKVVLLLSGRYAGRKAVVVKPNEEGSSDKPFPHALVAGIERYPRKVTKRMNKKKVQKRSKIKPFLKVVNYNHVMPTRYSVDIPFDKSNLNKEVLKDPKKKKTARNMVRVKFEEKYKAGKNKWFFQKLRF 136
BLAST of 60s ribosomal protein l27 vs. nr
Match: gi|961375108|gb|ALS04298.1| (60S ribosomal protein L27 [Acartia pacifica]) HSP 1 Score: 225.328 bits (573), Expect = 7.632e-74 Identity = 107/136 (78.68%), Postives = 125/136 (91.91%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 M KI+K+GKVVL+LSGR+AGRKAV+VKP +EG++DKPF HAL+AGI+RYPR VTKRM+KKK++ RSKIKPFLKVVNYNH+MPTRYSVDI FDK+NLNKE LKDP KKK ARNM RV+FEE+YK GKN+WFFQKLRF Sbjct: 1 MGKIIKAGKVVLLLSGRYAGRKAVVVKPNEEGSSDKPFPHALVAGIERYPRKVTKRMNKKKVQKRSKIKPFLKVVNYNHVMPTRYSVDIPFDKSNLNKEVLKDPKKKKTARNMARVKFEEKYKAGKNKWFFQKLRF 136
BLAST of 60s ribosomal protein l27 vs. nr
Match: gi|225714122|gb|ACO12907.1| (60S ribosomal protein L27 [Lepeophtheirus salmonis] >gi|290561357|gb|ADD38079.1| 60S ribosomal protein L27 [Lepeophtheirus salmonis]) HSP 1 Score: 224.172 bits (570), Expect = 2.694e-73 Identity = 104/136 (76.47%), Postives = 124/136 (91.18%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 M KIM+SG++V+VLSGRFAGRKAVIV+PTDEG +KPFGHAL+AG+DRYPR VTKRMSKKK+K RSKIKPFLKV+NYNH+MPTRY+VDI FDK ++NKE LKDPMKKKKAR +VR FEE+YK+G ++WFFQ+LRF Sbjct: 1 MGKIMRSGRIVVVLSGRFAGRKAVIVRPTDEGNGEKPFGHALVAGVDRYPRKVTKRMSKKKVKQRSKIKPFLKVLNYNHLMPTRYNVDIKFDKESINKEVLKDPMKKKKARQLVRNDFEEKYKSGNSKWFFQRLRF 136
BLAST of 60s ribosomal protein l27 vs. nr
Match: gi|1325272250|ref|XP_023320747.1| (60S ribosomal protein L27-like [Eurytemora affinis]) HSP 1 Score: 223.402 bits (568), Expect = 5.203e-73 Identity = 113/136 (83.09%), Postives = 129/136 (94.85%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 M KIMK+GKVVL+LSGR+AGRKAV+V+P+D+GT+DKPF HAL+AGIDRYPR VTK+M+KKKI+ RS IKPFLKVVNYNH+MPTRYSV+I FDKANLNKETLKDPMKKKKARNMVR +FEE+YKTGKNRWFFQKLRF Sbjct: 1 MGKIMKTGKVVLLLSGRYAGRKAVVVRPSDDGTSDKPFSHALVAGIDRYPRKVTKKMNKKKIQRRSVIKPFLKVVNYNHLMPTRYSVEITFDKANLNKETLKDPMKKKKARNMVRTKFEEKYKTGKNRWFFQKLRF 136
BLAST of 60s ribosomal protein l27 vs. nr
Match: gi|225711028|gb|ACO11360.1| (60S ribosomal protein L27 [Caligus rogercresseyi]) HSP 1 Score: 222.246 bits (565), Expect = 1.238e-72 Identity = 106/136 (77.94%), Postives = 119/136 (87.50%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 M KIMKSGKVV+VLSGR+AGRKAVIV+PTDEG +KPFGHAL+AG+DRYPR VTKRMSKKK+K RSKIKPFLKV+NYNHMMP RY+VD FDK +NKE LKDPMKKKKAR +VR FE +YK G N+WFFQKLRF Sbjct: 1 MGKIMKSGKVVVVLSGRYAGRKAVIVRPTDEGNGEKPFGHALIAGVDRYPRKVTKRMSKKKVKQRSKIKPFLKVLNYNHMMPARYTVDTKFDKEAINKEVLKDPMKKKKARQIVRNDFESKYKAGDNKWFFQKLRF 136
BLAST of 60s ribosomal protein l27 vs. nr
Match: gi|290462955|gb|ADD24525.1| (60S ribosomal protein L27 [Lepeophtheirus salmonis]) HSP 1 Score: 216.853 bits (551), Expect = 1.509e-70 Identity = 100/132 (75.76%), Postives = 120/132 (90.91%), Query Frame = 0 Query: 5 MKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 M+SG++V+VLSGRFAGRKAVIV+PTDEG +KPFGHAL+AG+DRYPR VTKRMSKKK+K RSKIKPFLKV+NYNH+MPTRY+VDI FDK ++NKE LKDPMKKKKAR +VR FEE+YK+G ++WFFQ+L F Sbjct: 1 MRSGRIVVVLSGRFAGRKAVIVRPTDEGNGEKPFGHALVAGVDRYPRKVTKRMSKKKVKQRSKIKPFLKVLNYNHLMPTRYNVDIKFDKESINKEVLKDPMKKKKARQLVRNDFEEKYKSGNSKWFFQRLGF 132
BLAST of 60s ribosomal protein l27 vs. nr
Match: gi|321467552|gb|EFX78542.1| (hypothetical protein DAPPUDRAFT_231081 [Daphnia pulex] >gi|1022756692|gb|KZS03437.1| 60S ribosomal protein L27 [Daphnia magna]) HSP 1 Score: 213.386 bits (542), Expect = 4.096e-69 Identity = 101/136 (74.26%), Postives = 120/136 (88.24%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 M KIMKSGKVVLVL GRFAGRKA+IVK DEGT++KP+GHAL+AG+DRYPR VT +MSKKK+ RSKIK F+K+VNYNHMMPTRYSVD+ FDK +NK+++KDP+K+KKAR VR +FEERYK+GKNRWFF KLRF Sbjct: 1 MGKIMKSGKVVLVLGGRFAGRKAIIVKNYDEGTSEKPYGHALVAGVDRYPRKVTNKMSKKKVAKRSKIKAFVKIVNYNHMMPTRYSVDLSFDKNLVNKDSIKDPLKRKKARFAVRTKFEERYKSGKNRWFFSKLRF 136
BLAST of 60s ribosomal protein l27 vs. nr
Match: gi|675390508|gb|KFM83405.1| (60S ribosomal protein L27, partial [Stegodyphus mimosarum]) HSP 1 Score: 213.001 bits (541), Expect = 6.146e-69 Identity = 103/136 (75.74%), Postives = 120/136 (88.24%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 M KIMK GKVVLVL+G++AGRKAV+VK DEGTADKP+GHAL+AGIDRYPR VT+RM KKKI RSKIKPF+KV+NYNH+MPTRY VDI FDK+ +NKE LKDP K++KAR V+ +FEERYKTGK+RWFFQKLRF Sbjct: 1 MGKIMKIGKVVLVLNGKYAGRKAVVVKNNDEGTADKPYGHALIAGIDRYPRKVTRRMGKKKIAKRSKIKPFVKVLNYNHLMPTRYMVDIQFDKSIVNKEVLKDPAKRRKARRDVKAKFEERYKTGKSRWFFQKLRF 136 The following BLAST results are available for this feature:
BLAST of 60s ribosomal protein l27 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 7
BLAST of 60s ribosomal protein l27 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 19
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BLAST of 60s ribosomal protein l27 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1323_size47899:30981..31760- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1323_size47899-snap-gene-0.17 ID=maker-scaffold1323_size47899-snap-gene-0.17|Name=60s ribosomal protein l27|organism=Tigriopus kingsejongensis|type=gene|length=780bp|location=Sequence derived from alignment at scaffold1323_size47899:30981..31760- (Tigriopus kingsejongensis)back to top Synonyms
The feature '60s ribosomal protein l27' has the following synonyms
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