60s ribosomal protein l27, maker-scaffold1323_size47899-snap-gene-0.17 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of 60s ribosomal protein l27 vs. L. salmonis genes
Match: EMLSAG00000005005 (supercontig:LSalAtl2s:LSalAtl2s260:403367:403765:1 gene:EMLSAG00000005005 transcript:EMLSAT00000005005 description:"augustus_masked-LSalAtl2s260-processed-gene-4.5") HSP 1 Score: 219.935 bits (559), Expect = 1.039e-75 Identity = 101/132 (76.52%), Postives = 121/132 (91.67%), Query Frame = 0 Query: 5 MKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 M+SG++V+VLSGRFAGRKAVIV+PTDEG +KPFGHAL+AG+DRYPR VTKRMSKKK+K RSKIKPFLKV+NYNH+MPTRY+VDI FDK ++NKE LKDPMKKKKAR +VR FEE+YK+G ++WFFQ+LRF Sbjct: 1 MRSGRIVVVLSGRFAGRKAVIVRPTDEGNGEKPFGHALVAGVDRYPRKVTKRMSKKKVKQRSKIKPFLKVLNYNHLMPTRYNVDIKFDKESINKEVLKDPMKKKKARQLVRNDFEEKYKSGNSKWFFQRLRF 132
BLAST of 60s ribosomal protein l27 vs. L. salmonis genes
Match: EMLSAG00000010695 (supercontig:LSalAtl2s:LSalAtl2s709:143943:144283:1 gene:EMLSAG00000010695 transcript:EMLSAT00000010695 description:"maker-LSalAtl2s709-snap-gene-1.3") HSP 1 Score: 67.781 bits (164), Expect = 4.016e-16 Identity = 46/119 (38.66%), Postives = 60/119 (50.42%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGID-RYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQF 118 M KIM+SG++V+VLS R++VIV+PT A + H + P I S I H+MP RY+V I FDK +NK+ LKDPMKKKKA +V F Sbjct: 1 MAKIMRSGRIVVVLSEHIVCRQSVIVRPTK---AIRRCSHRWCGTLSTNAPGINLSSRSSTTI----------------HLMPIRYNVHIKFDKEFINKQILKDPMKKKKAGQLVPNDF 100
BLAST of 60s ribosomal protein l27 vs. L. salmonis genes
Match: EMLSAG00000009106 (supercontig:LSalAtl2s:LSalAtl2s573:376010:378859:-1 gene:EMLSAG00000009106 transcript:EMLSAT00000009106 description:"snap_masked-LSalAtl2s573-processed-gene-3.5") HSP 1 Score: 63.929 bits (154), Expect = 2.611e-14 Identity = 30/55 (54.55%), Postives = 45/55 (81.82%), Query Frame = 0 Query: 55 KRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKK 109 K MSKK++K RSKIK FLKV++ NH+MP+RY++ I FDK ++NKE +K+ K+++ Sbjct: 2 KCMSKKRVKTRSKIKIFLKVIDNNHLMPSRYNLVIKFDKESVNKEVVKETTKRRR 56
BLAST of 60s ribosomal protein l27 vs. L. salmonis genes
Match: EMLSAG00000008855 (supercontig:LSalAtl2s:LSalAtl2s552:66828:67919:-1 gene:EMLSAG00000008855 transcript:EMLSAT00000008855 description:"snap-LSalAtl2s552-processed-gene-0.37") HSP 1 Score: 60.077 bits (144), Expect = 7.876e-13 Identity = 26/53 (49.06%), Postives = 38/53 (71.70%), Query Frame = 0 Query: 81 MPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQK 133 MPTRY+VD FDK ++N + LKD M+ K+ R +V F+ +YK G+ +WFF+K Sbjct: 1 MPTRYNVDSNFDKESINLDVLKDTMEMKEGRQLVCNDFDNKYKYGRIKWFFEK 53
BLAST of 60s ribosomal protein l27 vs. L. salmonis genes
Match: EMLSAG00000008229 (supercontig:LSalAtl2s:LSalAtl2s496:465796:466133:-1 gene:EMLSAG00000008229 transcript:EMLSAT00000008229 description:"maker-LSalAtl2s496-snap-gene-4.4") HSP 1 Score: 55.4546 bits (132), Expect = 1.827e-11 Identity = 28/70 (40.00%), Postives = 42/70 (60.00%), Query Frame = 0 Query: 67 KIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 K+K FLKV+ YNH++ T Y+V I + ++NKE LK M K V FE++ +G ++ F Q+LR Sbjct: 15 KVKFFLKVLCYNHLILTSYNVGIKLFEESINKEILKGIMNMKNTIQHVPYDFEDKNTSGNSKCFVQRLRL 84
BLAST of 60s ribosomal protein l27 vs. L. salmonis genes
Match: EMLSAG00000006010 (supercontig:LSalAtl2s:LSalAtl2s326:412759:435794:-1 gene:EMLSAG00000006010 transcript:EMLSAT00000006010 description:"snap_masked-LSalAtl2s326-processed-gene-4.1") HSP 1 Score: 49.2914 bits (116), Expect = 5.686e-9 Identity = 21/37 (56.76%), Postives = 28/37 (75.68%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKP 37 M +IM+SG++V+ LSG FAG KA IV+PTDE + P Sbjct: 47 MGRIMRSGRIVMALSGHFAGCKAXIVRPTDEENGENP 83
BLAST of 60s ribosomal protein l27 vs. L. salmonis genes
Match: EMLSAG00000000213 (supercontig:LSalAtl2s:LSalAtl2s1030:53525:53767:-1 gene:EMLSAG00000000213 transcript:EMLSAT00000000213 description:"maker-LSalAtl2s1030-snap-gene-0.1") HSP 1 Score: 43.5134 bits (101), Expect = 5.584e-7 Identity = 25/54 (46.30%), Postives = 32/54 (59.26%), Query Frame = 0 Query: 45 GIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNK 98 G D YPR V + RSK F KV+NYN++M T Y+VDI FDK ++ K Sbjct: 11 GGDFYPRKVGE--------TRSKCMSFHKVLNYNNLMHTCYNVDIEFDKESIGK 56
BLAST of 60s ribosomal protein l27 vs. SwissProt
Match: gi|6093884|sp|O74538.1|RL27B_SCHPO (RecName: Full=60S ribosomal protein L27-B) HSP 1 Score: 156.377 bits (394), Expect = 4.997e-49 Identity = 70/136 (51.47%), Postives = 99/136 (72.79%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 MVKI+K GKV LV GRFAG+K VI++ D+G+ PFGHA++AG++RYP VTK M K+I RS++KPF+KV+NYNH+MPTRY++++ K + T +P ++ A+ V+ FEE+Y+TGK+ WFF LRF Sbjct: 1 MVKILKPGKVALVTRGRFAGKKVVILQNVDQGSKSHPFGHAVVAGVERYPLKVTKSMGAKRIAKRSRVKPFIKVINYNHLMPTRYALELDNLKGLVTPTTFSEPSQRSAAKKTVKNTFEEKYQTGKSAWFFTPLRF 136
BLAST of 60s ribosomal protein l27 vs. SwissProt
Match: gi|15214261|sp|Q9P843.1|RL27_CANAX (RecName: Full=60S ribosomal protein L27) HSP 1 Score: 154.451 bits (389), Expect = 2.815e-48 Identity = 74/136 (54.41%), Postives = 106/136 (77.94%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 M K +KSGKV +V+ GR+AG+K VIVKP DEGT PF HA++AGI+R P VTK+M KK+ R+K+KPF+K+VNYNH+MPTRYS+D+ K+ + E L++P ++++A+ +V+ FEE+++ GKN+WFFQKL F Sbjct: 1 MAKFIKSGKVAIVVRGRYAGKKVVIVKPHDEGTKSHPFPHAIVAGIERAPLKVTKKMDAKKVTKRTKVKPFVKLVNYNHLMPTRYSLDVESFKSAVTSEALEEPSQREEAKKVVKKAFEEKHQAGKNKWFFQKLHF 136
BLAST of 60s ribosomal protein l27 vs. SwissProt
Match: gi|75313545|sp|Q9SKX8.1|RL271_ARATH (RecName: Full=60S ribosomal protein L27-1) HSP 1 Score: 142.124 bits (357), Expect = 2.351e-43 Identity = 68/136 (50.00%), Postives = 95/136 (69.85%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 MVK MK GK V++L GR+ G+KAVIVK D+GT +K +GH L+AG+ +YP V ++ S KK +S++K F KV+NY H+MPTRY++D+ K ++ + + KK A + +FEER+KTGKNRWFF KLRF Sbjct: 1 MVKCMKPGKAVILLQGRYTGKKAVIVKSFDDGTVEKKYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFFKVINYQHVMPTRYTLDLDL-KNVVSADAISSKDKKVTALKEAKAKFEERFKTGKNRWFFTKLRF 135
BLAST of 60s ribosomal protein l27 vs. SwissProt
Match: gi|109893407|sp|Q8LCL3.2|RL272_ARATH (RecName: Full=60S ribosomal protein L27-2) HSP 1 Score: 141.354 bits (355), Expect = 4.288e-43 Identity = 67/136 (49.26%), Postives = 95/136 (69.85%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 MVK +K K V++L GR+AG+KAVI+K D+GT+D+ +GH L+AG+ +YP V ++ S KK +S++K F+K+VNY H+MPTRY++D+ K + LK KK A + + EER+KTGKNRWFF KLRF Sbjct: 1 MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGTSDRRYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFIKLVNYQHLMPTRYTLDVDL-KEVATLDALKSKDKKVTALKEAKAKLEERFKTGKNRWFFTKLRF 135
BLAST of 60s ribosomal protein l27 vs. SwissProt
Match: gi|3123264|sp|P51419.2|RL273_ARATH (RecName: Full=60S ribosomal protein L27-3) HSP 1 Score: 140.584 bits (353), Expect = 7.824e-43 Identity = 68/137 (49.64%), Postives = 96/137 (70.07%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDK-ANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 MVK +K K V++L GR+AG+KAVI+K D+G D+P+GH L+AG+ +YP V ++ S KK +S++K F+K+VNY H+MPTRY++D+ + A L+ KD KK A + + EER+KTGKNRWFF KLRF Sbjct: 1 MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKD--KKVAALKEAKAKLEERFKTGKNRWFFTKLRF 135
BLAST of 60s ribosomal protein l27 vs. SwissProt
Match: gi|464630|sp|Q05462.1|RL27_PEA (RecName: Full=60S ribosomal protein L27) HSP 1 Score: 139.813 bits (351), Expect = 1.575e-42 Identity = 69/136 (50.74%), Postives = 95/136 (69.85%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 MVK +K K V++L GR+AG+KAVIVK D+GT +KP+GH L+AGI ++P V K+ S KK +S++K F+K+VNY H+MPTRY++D+ A + + L+ KK A + EER+KTGKNRWFF KLRF Sbjct: 1 MVKFLKPNKAVILLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKFPSKVIKKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVP-DVLQSKDKKVTALKETKKSLEERFKTGKNRWFFTKLRF 135
BLAST of 60s ribosomal protein l27 vs. SwissProt
Match: gi|730547|sp|P41101.1|RL27_SOLTU (RecName: Full=60S ribosomal protein L27) HSP 1 Score: 139.813 bits (351), Expect = 1.967e-42 Identity = 71/139 (51.08%), Postives = 97/139 (69.78%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFD---KANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 M K +K K V++L G++AGRKAVIV+ DEGT D+P+GH L+AGI RYP+ V ++ S KK +S++K F+K+VNYNH+MPTRY++D K +N + L+ KK AR + + ER+KTGKNRWFF KLRF Sbjct: 1 MEKFLKPNKAVILLQGKYAGRKAVIVRAFDEGTRDRPYGHCLVAGISRYPKKVIRKDSAKKAGKKSRVKAFIKLVNYNHIMPTRYTLDEDLKDVVKDVVNADVLQARDKKVTARR-TKARLAERFKTGKNRWFFTKLRF 138
BLAST of 60s ribosomal protein l27 vs. SwissProt
Match: gi|74897366|sp|Q55BE6.1|RL27_DICDI (RecName: Full=60S ribosomal protein L27) HSP 1 Score: 132.109 bits (331), Expect = 2.559e-39 Identity = 66/142 (46.48%), Postives = 100/142 (70.42%), Query Frame = 0 Query: 3 KIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADK--PFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANL----NKETLKDPMKKKKARNMVRVQ--FEERYKTGKNRWFFQKLRF 136 K +K G++V++L+G++AGRKAV++K D+ TA K P+GH L+AGID+YPR + + MS+K I R+ I+ F+KVVNYNH+MPTRY+ + G D++ N T++ K+A + V+ FE ++K GK++WFF KLRF Sbjct: 4 KFIKPGRLVILLNGKYAGRKAVVIKTFDDATASKSRPYGHCLVAGIDKYPRSIVRSMSRKTILKRTAIRSFVKVVNYNHIMPTRYNFE-GRDESAFTGLKNTVTVESSQVAKRAHTRLAVKKIFEAKHKAGKSKWFFSKLRF 144
BLAST of 60s ribosomal protein l27 vs. SwissProt
Match: gi|353678075|sp|P0DJ19.1|RL27_TETTH (RecName: Full=60S ribosomal protein L27) HSP 1 Score: 131.724 bits (330), Expect = 4.003e-39 Identity = 69/144 (47.92%), Postives = 95/144 (65.97%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKT--------GKNRWFFQKLRF 136 M K +K G+VV++L GRFAG+KAVIVK +++GT D+ FGH L+AG++R P+ VTKRM KKI+ R+ +KPF+K VN NH+MPTRYSV D L KE K + R+ ++ F E+Y+T ++FF KLRF Sbjct: 1 MAKFLKYGRVVILLQGRFAGKKAVIVKSSEDGTKDRKFGHVLVAGVERSPKKVTKRMGSKKIQKRTSVKPFIKYVNLNHIMPTRYSVKELCDFKELVKEDKIKNNAKSEVRDTLKKVFVEKYRTINPEEKSASHTKFFFSKLRF 144
BLAST of 60s ribosomal protein l27 vs. nr
Match: gi|961375780|gb|ALS04634.1| (60S ribosomal protein L27 [Pseudodiaptomus poplesia] >gi|961376052|gb|ALS04770.1| 60S ribosomal protein L27 [Pseudodiaptomus poplesia]) HSP 1 Score: 238.039 bits (606), Expect = 8.195e-79 Identity = 114/136 (83.82%), Postives = 128/136 (94.12%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 M KIMK+GKVVL+LSGR+AGRKAV+VKP+DEGT DKPF HAL+AGIDRYPR VTK+MSKK+I RSKIKPFLKVVNYNH++PTRYSVDI FDKAN+NKETLKDP KKKKARNMVR++FEE+YKTGKNRWFFQKLRF Sbjct: 1 MGKIMKAGKVVLLLSGRYAGRKAVVVKPSDEGTTDKPFSHALVAGIDRYPRKVTKKMSKKRITKRSKIKPFLKVVNYNHVLPTRYSVDIPFDKANINKETLKDPSKKKKARNMVRLKFEEKYKTGKNRWFFQKLRF 136
BLAST of 60s ribosomal protein l27 vs. nr
Match: gi|961376278|gb|ALS04883.1| (60S ribosomal protein L27 [Pseudodiaptomus poplesia]) HSP 1 Score: 234.572 bits (597), Expect = 1.786e-77 Identity = 111/132 (84.09%), Postives = 125/132 (94.70%), Query Frame = 0 Query: 5 MKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 MK+GKVVL+LSGR+AGRKAV+VKP+DEGT DKPF HAL+AGIDRYPR VTK+MSKK+I RSKIKPFLKVVNYNH++PTRYSVDI FDKAN+NKETLKDP KKKKARNMVR++FEE+YKTGKNRWFFQKLRF Sbjct: 1 MKAGKVVLLLSGRYAGRKAVVVKPSDEGTTDKPFSHALVAGIDRYPRKVTKKMSKKRITKRSKIKPFLKVVNYNHVLPTRYSVDIPFDKANINKETLKDPSKKKKARNMVRLKFEEKYKTGKNRWFFQKLRF 132
BLAST of 60s ribosomal protein l27 vs. nr
Match: gi|961375098|gb|ALS04293.1| (60S ribosomal protein L27 [Acartia pacifica] >gi|961375100|gb|ALS04294.1| 60S ribosomal protein L27 [Acartia pacifica] >gi|961375102|gb|ALS04295.1| 60S ribosomal protein L27 [Acartia pacifica] >gi|961375104|gb|ALS04296.1| 60S ribosomal protein L27 [Acartia pacifica] >gi|961375106|gb|ALS04297.1| 60S ribosomal protein L27 [Acartia pacifica]) HSP 1 Score: 226.868 bits (577), Expect = 2.138e-74 Identity = 108/136 (79.41%), Postives = 126/136 (92.65%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 M KI+K+GKVVL+LSGR+AGRKAV+VKP +EG++DKPF HAL+AGI+RYPR VTKRM+KKK++ RSKIKPFLKVVNYNH+MPTRYSVDI FDK+NLNKE LKDP KKK ARNMVRV+FEE+YK GKN+WFFQKLRF Sbjct: 1 MGKIIKAGKVVLLLSGRYAGRKAVVVKPNEEGSSDKPFPHALVAGIERYPRKVTKRMNKKKVQKRSKIKPFLKVVNYNHVMPTRYSVDIPFDKSNLNKEVLKDPKKKKTARNMVRVKFEEKYKAGKNKWFFQKLRF 136
BLAST of 60s ribosomal protein l27 vs. nr
Match: gi|961375108|gb|ALS04298.1| (60S ribosomal protein L27 [Acartia pacifica]) HSP 1 Score: 225.328 bits (573), Expect = 7.632e-74 Identity = 107/136 (78.68%), Postives = 125/136 (91.91%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 M KI+K+GKVVL+LSGR+AGRKAV+VKP +EG++DKPF HAL+AGI+RYPR VTKRM+KKK++ RSKIKPFLKVVNYNH+MPTRYSVDI FDK+NLNKE LKDP KKK ARNM RV+FEE+YK GKN+WFFQKLRF Sbjct: 1 MGKIIKAGKVVLLLSGRYAGRKAVVVKPNEEGSSDKPFPHALVAGIERYPRKVTKRMNKKKVQKRSKIKPFLKVVNYNHVMPTRYSVDIPFDKSNLNKEVLKDPKKKKTARNMARVKFEEKYKAGKNKWFFQKLRF 136
BLAST of 60s ribosomal protein l27 vs. nr
Match: gi|225714122|gb|ACO12907.1| (60S ribosomal protein L27 [Lepeophtheirus salmonis] >gi|290561357|gb|ADD38079.1| 60S ribosomal protein L27 [Lepeophtheirus salmonis]) HSP 1 Score: 224.172 bits (570), Expect = 2.694e-73 Identity = 104/136 (76.47%), Postives = 124/136 (91.18%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 M KIM+SG++V+VLSGRFAGRKAVIV+PTDEG +KPFGHAL+AG+DRYPR VTKRMSKKK+K RSKIKPFLKV+NYNH+MPTRY+VDI FDK ++NKE LKDPMKKKKAR +VR FEE+YK+G ++WFFQ+LRF Sbjct: 1 MGKIMRSGRIVVVLSGRFAGRKAVIVRPTDEGNGEKPFGHALVAGVDRYPRKVTKRMSKKKVKQRSKIKPFLKVLNYNHLMPTRYNVDIKFDKESINKEVLKDPMKKKKARQLVRNDFEEKYKSGNSKWFFQRLRF 136
BLAST of 60s ribosomal protein l27 vs. nr
Match: gi|1325272250|ref|XP_023320747.1| (60S ribosomal protein L27-like [Eurytemora affinis]) HSP 1 Score: 223.402 bits (568), Expect = 5.203e-73 Identity = 113/136 (83.09%), Postives = 129/136 (94.85%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 M KIMK+GKVVL+LSGR+AGRKAV+V+P+D+GT+DKPF HAL+AGIDRYPR VTK+M+KKKI+ RS IKPFLKVVNYNH+MPTRYSV+I FDKANLNKETLKDPMKKKKARNMVR +FEE+YKTGKNRWFFQKLRF Sbjct: 1 MGKIMKTGKVVLLLSGRYAGRKAVVVRPSDDGTSDKPFSHALVAGIDRYPRKVTKKMNKKKIQRRSVIKPFLKVVNYNHLMPTRYSVEITFDKANLNKETLKDPMKKKKARNMVRTKFEEKYKTGKNRWFFQKLRF 136
BLAST of 60s ribosomal protein l27 vs. nr
Match: gi|225711028|gb|ACO11360.1| (60S ribosomal protein L27 [Caligus rogercresseyi]) HSP 1 Score: 222.246 bits (565), Expect = 1.238e-72 Identity = 106/136 (77.94%), Postives = 119/136 (87.50%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 M KIMKSGKVV+VLSGR+AGRKAVIV+PTDEG +KPFGHAL+AG+DRYPR VTKRMSKKK+K RSKIKPFLKV+NYNHMMP RY+VD FDK +NKE LKDPMKKKKAR +VR FE +YK G N+WFFQKLRF Sbjct: 1 MGKIMKSGKVVVVLSGRYAGRKAVIVRPTDEGNGEKPFGHALIAGVDRYPRKVTKRMSKKKVKQRSKIKPFLKVLNYNHMMPARYTVDTKFDKEAINKEVLKDPMKKKKARQIVRNDFESKYKAGDNKWFFQKLRF 136
BLAST of 60s ribosomal protein l27 vs. nr
Match: gi|290462955|gb|ADD24525.1| (60S ribosomal protein L27 [Lepeophtheirus salmonis]) HSP 1 Score: 216.853 bits (551), Expect = 1.509e-70 Identity = 100/132 (75.76%), Postives = 120/132 (90.91%), Query Frame = 0 Query: 5 MKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 M+SG++V+VLSGRFAGRKAVIV+PTDEG +KPFGHAL+AG+DRYPR VTKRMSKKK+K RSKIKPFLKV+NYNH+MPTRY+VDI FDK ++NKE LKDPMKKKKAR +VR FEE+YK+G ++WFFQ+L F Sbjct: 1 MRSGRIVVVLSGRFAGRKAVIVRPTDEGNGEKPFGHALVAGVDRYPRKVTKRMSKKKVKQRSKIKPFLKVLNYNHLMPTRYNVDIKFDKESINKEVLKDPMKKKKARQLVRNDFEEKYKSGNSKWFFQRLGF 132
BLAST of 60s ribosomal protein l27 vs. nr
Match: gi|321467552|gb|EFX78542.1| (hypothetical protein DAPPUDRAFT_231081 [Daphnia pulex] >gi|1022756692|gb|KZS03437.1| 60S ribosomal protein L27 [Daphnia magna]) HSP 1 Score: 213.386 bits (542), Expect = 4.096e-69 Identity = 101/136 (74.26%), Postives = 120/136 (88.24%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 M KIMKSGKVVLVL GRFAGRKA+IVK DEGT++KP+GHAL+AG+DRYPR VT +MSKKK+ RSKIK F+K+VNYNHMMPTRYSVD+ FDK +NK+++KDP+K+KKAR VR +FEERYK+GKNRWFF KLRF Sbjct: 1 MGKIMKSGKVVLVLGGRFAGRKAIIVKNYDEGTSEKPYGHALVAGVDRYPRKVTNKMSKKKVAKRSKIKAFVKIVNYNHMMPTRYSVDLSFDKNLVNKDSIKDPLKRKKARFAVRTKFEERYKSGKNRWFFSKLRF 136
BLAST of 60s ribosomal protein l27 vs. nr
Match: gi|675390508|gb|KFM83405.1| (60S ribosomal protein L27, partial [Stegodyphus mimosarum]) HSP 1 Score: 213.001 bits (541), Expect = 6.146e-69 Identity = 103/136 (75.74%), Postives = 120/136 (88.24%), Query Frame = 0 Query: 1 MVKIMKSGKVVLVLSGRFAGRKAVIVKPTDEGTADKPFGHALLAGIDRYPRIVTKRMSKKKIKMRSKIKPFLKVVNYNHMMPTRYSVDIGFDKANLNKETLKDPMKKKKARNMVRVQFEERYKTGKNRWFFQKLRF 136 M KIMK GKVVLVL+G++AGRKAV+VK DEGTADKP+GHAL+AGIDRYPR VT+RM KKKI RSKIKPF+KV+NYNH+MPTRY VDI FDK+ +NKE LKDP K++KAR V+ +FEERYKTGK+RWFFQKLRF Sbjct: 1 MGKIMKIGKVVLVLNGKYAGRKAVVVKNNDEGTADKPYGHALIAGIDRYPRKVTRRMGKKKIAKRSKIKPFVKVLNYNHLMPTRYMVDIQFDKSIVNKEVLKDPAKRRKARRDVKAKFEERYKTGKSRWFFQKLRF 136 The following BLAST results are available for this feature:
BLAST of 60s ribosomal protein l27 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 7
BLAST of 60s ribosomal protein l27 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 19
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BLAST of 60s ribosomal protein l27 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1323_size47899:30981..31760- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1323_size47899-snap-gene-0.17 ID=maker-scaffold1323_size47899-snap-gene-0.17|Name=60s ribosomal protein l27|organism=Tigriopus kingsejongensis|type=gene|length=780bp|location=Sequence derived from alignment at scaffold1323_size47899:30981..31760- (Tigriopus kingsejongensis)back to top Synonyms
The feature '60s ribosomal protein l27' has the following synonyms
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