Tk12389, Tk12389 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk12389
Unique NameTk12389
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length454
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 50..120
e-value: 1.1E-25
score: 101.3
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 51..119
e-value: 3.9E-25
score: 87.9
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 51..119
score: 21.42
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10coord: 48..127
e-value: 4.6E-28
score: 99.5
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 36..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..262
NoneNo IPR availablePANTHERPTHR10270:SF288SUBFAMILY NOT NAMEDcoord: 12..280
NoneNo IPR availablePANTHERPTHR10270SOX TRANSCRIPTION FACTORcoord: 12..280
NoneNo IPR availableCDDcd01388SOX-TCF_HMG-boxcoord: 50..120
e-value: 5.8034E-32
score: 114.318

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold1132_size60346-processed-gene-0.2-mRNA-1snap_masked-scaffold1132_size60346-processed-gene-0.2-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk12389 ID=Tk12389|Name=Tk12389|organism=Tigriopus kingsejongensis|type=polypeptide|length=454bp
MISVLNPYRPMAQMKLCHRSSGTFGSLSVDQNSTTPYTDATQTKKQPVNR
IKRPMNAFMVFSHIERKKIIEFQPDIHNAEISKNLGKKWKLLSDEAKQPY
IQEAERLRLLHMKEYPDYKYQPRKKNGPGSKTNSPVHRSLVEKKSPVKRS
SPMKLNRSFGGNSWVNSSKVRFSTTNGPLTCVNHERLNLKFTIDSKFKAN
LAKSSAKLVPVSGFAVDTSKTSPTPSLPNVPTTPDLPHSPSESFYEDHHH
HHQYHPSQFHHHHSHMNASMMLHGVDAVKQNLDFNHFCDSTSISATTTSH
SYTPTTLNTNANQIKMEPISPMKTELKQEPISPHRYDCLYSNNQIKQESN
YFHEPLTPSSMSTDLSSVTSSLDDLDNIADLLPMHGGGDLSLDDISNLVD
IPKSFPEDQKPPECLMDMDFESPFAFTSPEDNDVFSSIDYHDSFVDNSLA
SFIS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009071HMG_box_dom
IPR036910HMG_box_dom_sf
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